F360777

General Info

Members Datasets Scaffolds Average Seq Length
249 170 235 711

Family's Representative Sequence

Representative Sequence 3300025298|Ga0209050_1002417|Ga0209050_10024178
Length 764
Sequence MLIFVGRVNPRAGKHAFDTTGVLARRLLIGVSGLPTCHRIPGSGIPMATSSVLTPFPLHRLAIASIALAAGGLSLSVVIKGTADAPVTVGGFGDTPVAKLPMQASVISAEMLADRGLSSLAGLTLLDASVGDSYNSTGYVSYLKVRGYDLDNRFNFRRDGLPINAETALPLANKGSVEVLKGTSGIQSGTSAPGGLVNLVVKRPTVELTSVMLGVSERGTIESAMDWSHRFSDGHGNDKAFGLRVNLQAAKLRPELRDADGNRWLMAVAGDWRVTRDTLIEAEVELSRQSQPSQPGFSLLGDKLPDAKAIDPRINLNNQSWSLPVVFEGRTASLRVQHQLNADWKLQAHAAIQRLVNDDRLAYPFGCTAGDGTYYPSTYCPNGTFDQYDFRSENEHRNSDALDLSAQGKLRTAGIAHELTTGVLFSRYKSRLQGQAYNPAGTGNIWGTLPTTADPTLSGTNTNRTERSTELYLRDAMQFSERWQGWLGVRHTRLKRDSVAVGPEAGQVGTPNPYAQSFTTPWLGVSYAIDPQLLAYASWGQGIESAVVPNLPVYANRTAVLPALRSKQWEIGLKSGSRTVDWSINYFDISKPATRDVPVTVNGENMLETRIDGEQNHRGVEAQADLKWTNGGLMASAMKLRARRERSEDVTLNGLKPTNVPETVLKLQAHQNVWLPGLELQAGVVYEGKRMVLPDNSLAIPSWTRLDLGARYEQNVGRQLLIWRVGVDNVTDRRAWRESPYQYNHVYLYPLANRTWRASVEWVL

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
3 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
4 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
5 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
6 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
7 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
8 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
9 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
10 2643221660 Methylibium sp. Root1272 Isolate Unclassified
11 2831864461 Roseateles noduli HZ7 Isolate Nodule
12 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
13 2929520902 Variovorax beijingensis 502 Isolate Unclassified
14 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
15 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
16 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
17 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
18 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
19 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
20 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
21 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
22 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
23 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
24 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
25 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
26 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
27 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
28 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
29 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
30 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
31 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
32 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
33 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
38 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
39 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
55 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
56 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
57 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
60 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
71 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
73 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
74 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
76 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
108 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
111 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
112 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
113 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
114 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
115 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
116 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
117 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
118 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
119 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
120 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
125 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
126 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
127 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
128 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
129 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
132 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
133 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
134 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
135 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
136 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
137 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
138 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
156 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
159 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
160 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
161 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
162 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
163 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
164 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
165 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
166 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
167 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
168 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
169 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
170 8015556637 Bdellovibrio reynosensis LBG001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.38
Metatranscriptomes 0
Isolates 5.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.1
Nodule 1.61
Rhizoplane 2.41
Rhizosphere 56.22
Stem 0
Stem Tuber 0
Unclassified 13.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1002013 3300002773 Bacteria 8011
2 JGI25153J46596_10001058 3300003215 Bacteria 16781
3 JGI25153J46596_10018506 3300003215 Bacteria 2703
4 rootL2_10000073 3300003322 Bacteria 23640
5 rootH1_10002689 3300003323 Bacteria 6373
6 Ga0055525_1000031 3300003759 Bacteria 314909
7 Ga0055526_1001049 3300003771 Bacteria 20172
8 Ga0055524_1000175 3300003775 Bacteria 72850
9 Ga0055524_1002284 3300003775 Bacteria 9999
10 Ga0055524_1010042 3300003775 Bacteria 3797
11 Ga0055530_10004437 3300003791 Bacteria 7213
12 Ga0055540_1000148 3300003792 Bacteria 70105
13 Ga0055531_10007420 3300003794 Bacteria 5992
14 Ga0055531_10009043 3300003794 Bacteria 5146
15 Ga0055543_1007869 3300004625 Bacteria 2420
16 Ga0065165_1000248 3300005262 Bacteria 93216
17 Ga0065165_1000457 3300005262 Bacteria 63927
18 Ga0070683_100008793 3300005329 Bacteria 8587
19 Ga0070670_100014457 3300005331 Bacteria 6776
20 Ga0070670_100041937 3300005331 Bacteria 3933
21 Ga0070677_10016172 3300005333 Bacteria 2653
22 Ga0070666_10052619 3300005335 Bacteria 2744
23 Ga0068868_100031673 3300005338 Bacteria 4065
24 Ga0070660_100058586 3300005339 Bacteria 2985
25 Ga0070661_100000264 3300005344 Bacteria 43037
26 Ga0070675_100012345 3300005354 Bacteria 6696
27 Ga0070671_100004602 3300005355 Bacteria 10936
28 Ga0070673_100007831 3300005364 Bacteria 7077
29 Ga0070673_100028741 3300005364 Bacteria 4139
30 Ga0070673_100036933 3300005364 Bacteria 3718
31 Ga0070667_100000623 3300005367 Bacteria 34501
32 Ga0070667_100066643 3300005367 Bacteria 3060
33 Ga0070708_100080863 3300005445 Bacteria 2941
34 Ga0070663_100037624 3300005455 Bacteria 3370
35 Ga0070678_100007822 3300005456 Bacteria 6361
36 Ga0068867_100000228 3300005459 Bacteria 36773
37 Ga0068867_100058127 3300005459 Bacteria 2866
38 Ga0068867_100083109 3300005459 Bacteria 2417
39 Ga0070679_100005914 3300005530 Bacteria 11367
40 Ga0070684_100071117 3300005535 Bacteria 3062
41 Ga0068853_100019721 3300005539 Bacteria 5598
42 Ga0068853_100111755 3300005539 Bacteria 2428
43 Ga0070672_100018514 3300005543 Bacteria 5036
44 Ga0070672_100088013 3300005543 Bacteria 2500
45 Ga0070665_100028486 3300005548 Bacteria 5624
46 Ga0070664_100008721 3300005564 Bacteria 8209
47 Ga0070664_100022426 3300005564 Bacteria 5205
48 Ga0068856_100106051 3300005614 Bacteria 2804
49 Ga0068859_100077915 3300005617 Bacteria 3355
50 Ga0068864_100003065 3300005618 Bacteria 13798
51 Ga0068851_10029611 3300005834 Bacteria 2711
52 Ga0068863_100024869 3300005841 Bacteria 5712
53 Ga0068863_100061288 3300005841 Bacteria 3557
54 Ga0068858_100016571 3300005842 Bacteria 6922
55 Ga0068860_100084302 3300005843 Bacteria 3023
56 Ga0075365_10041157 3300006038 Bacteria 3017
57 Ga0075363_100009349 3300006048 Bacteria 4607
58 Ga0075366_10011626 3300006195 Bacteria 4974
59 Ga0075366_10019621 3300006195 Bacteria 3916
60 Ga0075366_10048557 3300006195 Bacteria 2517
61 Ga0075370_10001149 3300006353 Bacteria 11117
62 Ga0075370_10004801 3300006353 Bacteria 6618
63 Ga0075370_10019626 3300006353 Bacteria 3684
64 Ga0075370_10021350 3300006353 Bacteria 3547
65 Ga0097620_100077913 3300006931 Bacteria 3355
66 Ga0099823_1000049 3300006944 Bacteria 58213
67 Ga0079104_1000595 3300006946 Bacteria 36027
68 Ga0105243_10001277 3300009148 Bacteria 22593
69 Ga0157319_1000003 3300012497 Bacteria 397199
70 Ga0157369_10084541 3300013105 Bacteria 3392
71 Ga0157374_10086853 3300013296 Bacteria 2977
72 Ga0163162_10036982 3300013306 Bacteria 4870
73 Ga0157375_10031714 3300013308 Bacteria 5002
74 Ga0157377_10000016 3300014745 Bacteria 190613
75 Ga0157377_10012033 3300014745 Bacteria 4339
76 Ga0157379_10011018 3300014968 Bacteria 7883
77 Ga0157379_10028671 3300014968 Bacteria 4951
78 Ga0157379_10106634 3300014968 Bacteria 2515
79 Ga0157376_10015713 3300014969 Bacteria 5727
80 Ga0213872_10000006 3300021361 Bacteria 249845
81 Ga0213872_10000102 3300021361 Bacteria 79440
82 Ga0213872_10000139 3300021361 Bacteria 65459
83 Ga0213872_10000152 3300021361 Bacteria 63382
84 Ga0209563_100044 3300025230 Bacteria 396812
85 Ga0207425_1000387 3300025245 Bacteria 29723
86 Ga0209129_1000041 3300025258 Bacteria 307590
87 Ga0209564_1000029 3300025295 Bacteria 505995
88 Ga0209564_1000051 3300025295 Bacteria 357748
89 Ga0209758_1000043 3300025297 Bacteria 402310
90 Ga0209758_1000057 3300025297 Bacteria 333111
91 Ga0209050_1000149 3300025298 Bacteria 163252
92 Ga0209050_1000738 3300025298 Bacteria 47442
93 Ga0209050_1002417 3300025298 Bacteria 16104
94 Ga0209050_1006099 3300025298 Bacteria 7273
95 Ga0209256_1000024 3300025299 Bacteria 448909
96 Ga0209256_1001581 3300025299 Bacteria 22336
97 Ga0209256_1003396 3300025299 Bacteria 11235
98 Ga0209256_1006348 3300025299 Bacteria 6306
99 Ga0209051_1000155 3300025303 Bacteria 129560
100 Ga0209051_1000755 3300025303 Bacteria 34692
101 Ga0209257_1000236 3300025304 Bacteria 129543
102 Ga0209257_1000628 3300025304 Bacteria 56788
103 Ga0207682_10012086 3300025893 Bacteria 3372
104 Ga0207645_10012446 3300025907 Bacteria 5771
105 Ga0207645_10030899 3300025907 Bacteria 3450
106 Ga0207645_10034718 3300025907 Bacteria 3240
107 Ga0207684_10055669 3300025910 Bacteria 3355
108 Ga0207662_10026869 3300025918 Bacteria 3322
109 Ga0207649_10008493 3300025920 Bacteria 5600
110 Ga0207652_10035189 3300025921 Bacteria 4226
111 Ga0207650_10024743 3300025925 Bacteria 4272
112 Ga0207644_10075142 3300025931 Bacteria 2482
113 Ga0207706_10084530 3300025933 Bacteria 2790
114 Ga0207709_10001251 3300025935 Bacteria 18257
115 Ga0207670_10017842 3300025936 Bacteria 4299
116 Ga0207691_10112930 3300025940 Bacteria 2415
117 Ga0207711_10009773 3300025941 Bacteria 7977
118 Ga0207689_10015841 3300025942 Bacteria 6385
119 Ga0207661_10040009 3300025944 Bacteria 3683
120 Ga0207679_10000846 3300025945 Bacteria 19674
121 Ga0207651_10000163 3300025960 Bacteria 28675
122 Ga0207651_10013257 3300025960 Bacteria 4708
123 Ga0207668_10071679 3300025972 Bacteria 2476
124 Ga0207658_10005587 3300025986 Bacteria 8601
125 Ga0207677_10019414 3300026023 Bacteria 4105
126 Ga0207678_10020417 3300026067 Bacteria 5810
127 Ga0207641_10072920 3300026088 Bacteria 2958
128 Ga0207641_10072947 3300026088 Bacteria 2957
129 Ga0207648_10000598 3300026089 Bacteria 40545
130 Ga0207648_10020570 3300026089 Bacteria 5941
131 Ga0207648_10065560 3300026089 Bacteria 3166
132 Ga0207676_10013664 3300026095 Bacteria 5830
133 Ga0207676_10036603 3300026095 Bacteria 3735
134 Ga0207675_100025268 3300026118 Bacteria 5528
135 Ga0207675_100057366 3300026118 Bacteria 3633
136 Ga0207683_10029160 3300026121 Bacteria 4777
137 Ga0207683_10055553 3300026121 Bacteria 3472
138 Ga0207683_10067674 3300026121 Bacteria 3151
139 Ga0207698_10023530 3300026142 Bacteria 4305
140 Ga0209281_1001914 3300027111 Bacteria 9890
141 Ga0209970_1000485 3300027614 Bacteria 6801
142 Ga0268264_10072523 3300028381 Bacteria 2920
143 Ga0307517_10000150 3300028786 Bacteria 110446
144 Ga0307515_10000830 3300028794 Bacteria 71111
145 Ga0307515_10011562 3300028794 Bacteria 16739
146 Ga0307515_10021637 3300028794 Bacteria 11387
147 Ga0307515_10026130 3300028794 Bacteria 10064
148 Ga0307515_10045567 3300028794 Bacteria 6731
149 Ga0307515_10046486 3300028794 Bacteria 6633
150 Ga0307515_10078098 3300028794 Bacteria 4360
151 Ga0265331_10001772 3300031250 Bacteria 15463
152 Ga0265327_10000012 3300031251 Bacteria 530403
153 Ga0307509_10002837 3300031507 Bacteria 27455
154 Ga0307509_10004595 3300031507 Bacteria 19790
155 Ga0307509_10006686 3300031507 Bacteria 15382
156 Ga0307508_10000061 3300031616 Bacteria 124749
157 Ga0307508_10001937 3300031616 Bacteria 22703
158 Ga0307508_10002030 3300031616 Bacteria 21943
159 Ga0307514_10019733 3300031649 Bacteria 5513
160 Ga0307514_10057719 3300031649 Bacteria 2972
161 Ga0307516_10024092 3300031730 Bacteria 6222
162 Ga0307516_10086738 3300031730 Bacteria 2965
163 Ga0307510_10002109 3300033180 Bacteria 22476
164 Ga0307510_10036092 3300033180 Bacteria 5508
165 Ga0373931_0003882 3300035691 Bacteria 6762
166 Ga0395899_0020299 3300037312 Bacteria 5040
167 Ga0395898_0101332 3300037466 Bacteria 2765
168 Ga0395905_0000180 3300037471 Bacteria 100693
169 Ga0395905_0002881 3300037471 Bacteria 18795
170 Ga0395905_0010125 3300037471 Bacteria 9191
171 Ga0395905_0014971 3300037471 Bacteria 7396
172 Ga0395901_0051814 3300038443 Bacteria 4266
173 Ga0436361_0062004 3300039447 Bacteria 42438
174 Ga0436361_0180429 3300039447 Bacteria 24046
175 Ga0436361_0301322 3300039447 Bacteria 54194
176 Ga0436361_0691793 3300039447 Bacteria 41414
177 Ga0436361_1043116 3300039447 Bacteria 3630
178 Ga0436361_1123527 3300039447 Bacteria 5187
179 Ga0451793_1883481 3300041452 Bacteria 3182
180 Ga0450911_000121 3300042115 Bacteria 31301
181 Ga0450918_000785 3300042531 Bacteria 6688
182 Ga0450893_0001705 3300042532 Bacteria 3380
183 Ga0451577_0015599 3300042876 Bacteria 7060
184 Ga0451577_0063720 3300042876 Bacteria 3287
185 Ga0453684_0008284 3300044712 Bacteria 18727
186 Ga0453684_0161522 3300044712 Bacteria 2650
187 Ga0495592_0005413 3300046454 Bacteria 9423
188 Ga0495638_0042852 3300046460 Bacteria 2858
189 Ga0495610_0006100 3300046512 Bacteria 8407
190 Ga0495632_0008762 3300046519 Bacteria 6165
191 Ga0495654_0001638 3300046530 Bacteria 15167
192 Ga0495598_0006192 3300046537 Bacteria 2692
193 Ga0495621_0010220 3300046539 Bacteria 2865
194 Ga0495625_0001549 3300046660 Bacteria 27422
195 Ga0495686_0005311 3300047472 Bacteria 10208
196 Ga0495593_0032637 3300047673 Bacteria 2837
197 Ga0496101_0053437 3300048904 Bacteria 2915
198 Ga0496102_0021936 3300048905 Bacteria 5654
199 Ga0496104_0018425 3300048907 Bacteria 6368
200 Ga0496105_0042720 3300048908 Bacteria 3738
201 Ga0496110_0037391 3300048913 Bacteria 4219
202 Ga0496121_0005075 3300048924 Bacteria 17179
203 Ga0496124_0000344 3300048927 Bacteria 85082
204 Ga0496124_0015920 3300048927 Bacteria 7181
205 Ga0496125_0007748 3300048928 Bacteria 11366
206 Ga0496125_0011607 3300048928 Bacteria 8801
207 Ga0501043_0000053 3300049579 Bacteria 106085
208 Ga0501046_0000018 3300049580 Bacteria 220589
209 Ga0501047_0000020 3300049581 Bacteria 259377
210 Ga0501048_0001721 3300049582 Bacteria 16679
211 Ga0501035_0102099 3300049822 Bacteria 2516
212 Ga0501045_0005437 3300049824 Bacteria 8822
213 nmdc:mga0k408_12461_c1 3300050493 Bacteria 4648
214 nmdc:mga0k408_34686_c1 3300050493 Bacteria 2889
215 nmdc:mga0k408_4823_c1 3300050493 Bacteria 7153
216 nmdc:mga06z11_2113_c1 3300050494 Bacteria 7535
217 nmdc:mga07m45_18334_c1 3300050496 Bacteria 3776
218 nmdc:mga07m45_191_c1 3300050496 Bacteria 24330
219 nmdc:mga07m45_5609_c1 3300050496 Bacteria 6269
220 nmdc:mga0sz30_19362_c1 3300050516 Bacteria 2736
221 Ga0500578_0000011 3300053086 Bacteria 217243
222 Ga0500578_0041188 3300053086 Bacteria 2967
223 Ga0500646_0008236 3300053090 Bacteria 2667
224 Ga0500593_000112 3300053117 Bacteria 31359
225 Ga0500594_0001370 3300053118 Bacteria 5289
226 Ga0500642_0009839 3300053130 Bacteria 3342
227 Ga0500559_0000069 3300053136 Bacteria 82288
228 Ga0500568_0004913 3300053139 Bacteria 7035
229 Ga0500619_008514 3300053154 Bacteria 2496
230 Ga0500622_0000881 3300053156 Bacteria 25562
231 Ga0500622_0000974 3300053156 Bacteria 24254
232 Ga0500622_0002092 3300053156 Bacteria 14873
233 Ga0500622_0047879 3300053156 Bacteria 2207
234 Ga0500636_0051614 3300053177 Bacteria 2418
235 Ga0466962_0015011 3300061719 Bacteria 3734

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300025907 Ga0207645_10030899 Ga0207645_100308992 611
2 iso_pu_bacteria 2886848708 2886854785 617
3 3300005543 Ga0070672_100088013 Ga0070672_1000880132 640
4 3300053117 Ga0500593_000112 Ga0500593_000112_7077_9221 656
5 3300053086 Ga0500578_0041188 Ga0500578_0041188_864_2900 658
6 3300037471 Ga0395905_0014971 Ga0395905_0014971_2878_5028 664
7 3300048927 Ga0496124_0015920 Ga0496124_0015920_2319_4538 664
8 3300049822 Ga0501035_0102099 Ga0501035_0102099_38_2200 666
9 3300053156 Ga0500622_0002092 Ga0500622_0002092_6098_8329 666
10 3300025910 Ga0207684_10055669 Ga0207684_100556692 667
11 3300005445 Ga0070708_100080863 Ga0070708_1000808632 668
12 3300006353 Ga0075370_10004801 Ga0075370_100048015 669
13 3300048907 Ga0496104_0018425 Ga0496104_0018425_3331_5382 669
14 3300048908 Ga0496105_0042720 Ga0496105_0042720_144_2195 669
15 3300003771 Ga0055526_1001049 Ga0055526_100104915 670
16 3300025295 Ga0209564_1000051 Ga0209564_1000051175 670
17 3300053156 Ga0500622_0047879 Ga0500622_0047879_145_2190 670
18 3300006038 Ga0075365_10041157 Ga0075365_100411572 671
19 3300006048 Ga0075363_100009349 Ga0075363_1000093494 671
20 3300050494 nmdc:mga06z11_2113_c1 nmdc:mga06z11_2113_c1_3913_6093 671
21 3300050496 nmdc:mga07m45_5609_c1 nmdc:mga07m45_5609_c1_1282_3462 671
22 3300050516 nmdc:mga0sz30_19362_c1 nmdc:mga0sz30_19362_c1_409_2589 671
23 3300025298 Ga0209050_1006099 Ga0209050_10060996 673
24 3300004625 Ga0055543_1007869 Ga0055543_10078691 676
25 3300005262 Ga0065165_1000457 Ga0065165_100045750 676
26 3300005543 Ga0070672_100018514 Ga0070672_1000185142 676
27 3300006353 Ga0075370_10021350 Ga0075370_100213502 676
28 3300013296 Ga0157374_10086853 Ga0157374_100868532 676
29 3300013306 Ga0163162_10036982 Ga0163162_100369825 676
30 3300013308 Ga0157375_10031714 Ga0157375_100317146 676
31 3300014968 Ga0157379_10011018 Ga0157379_100110188 676
32 3300014969 Ga0157376_10015713 Ga0157376_100157137 676
33 3300050496 nmdc:mga07m45_18334_c1 nmdc:mga07m45_18334_c1_897_3083 676
34 3300003775 Ga0055524_1000175 Ga0055524_100017542 677
35 3300005548 Ga0070665_100028486 Ga0070665_1000284865 677
36 3300025299 Ga0209256_1000024 Ga0209256_1000024302 677
37 3300046660 Ga0495625_0001549 Ga0495625_0001549_1342_3621 677
38 3300006946 Ga0079104_1000595 Ga0079104_100059510 678
39 3300027111 Ga0209281_1001914 Ga0209281_100191410 678
40 3300025907 Ga0207645_10034718 Ga0207645_100347182 679
41 3300025918 Ga0207662_10026869 Ga0207662_100268692 679
42 3300026118 Ga0207675_100057366 Ga0207675_1000573663 679
43 3300031616 Ga0307508_10000061 Ga0307508_1000006161 679
44 3300046454 Ga0495592_0005413 Ga0495592_0005413_647_2812 680
45 3300031250 Ga0265331_10001772 Ga0265331_100017725 681
46 3300031251 Ga0265327_10000012 Ga0265327_10000012325 681
47 3300053154 Ga0500619_008514 Ga0500619_008514_258_2417 681
48 3300005333 Ga0070677_10016172 Ga0070677_100161723 682
49 3300031730 Ga0307516_10086738 Ga0307516_100867382 682
50 3300005331 Ga0070670_100041937 Ga0070670_1000419372 683
51 3300005335 Ga0070666_10052619 Ga0070666_100526192 683
52 3300005338 Ga0068868_100031673 Ga0068868_1000316732 683
53 3300005344 Ga0070661_100000264 Ga0070661_10000026438 683
54 3300005354 Ga0070675_100012345 Ga0070675_1000123456 683
55 3300005355 Ga0070671_100004602 Ga0070671_1000046022 683
56 3300005364 Ga0070673_100007831 Ga0070673_1000078312 683
57 3300005564 Ga0070664_100008721 Ga0070664_1000087219 683
58 3300005617 Ga0068859_100077915 Ga0068859_1000779152 683
59 3300005618 Ga0068864_100003065 Ga0068864_1000030653 683
60 3300005841 Ga0068863_100024869 Ga0068863_1000248696 683
61 3300005842 Ga0068858_100016571 Ga0068858_1000165716 683
62 3300005843 Ga0068860_100084302 Ga0068860_1000843022 683
63 3300006195 Ga0075366_10019621 Ga0075366_100196212 683
64 3300006931 Ga0097620_100077913 Ga0097620_1000779132 683
65 3300025298 Ga0209050_1000149 Ga0209050_100014932 683
66 3300025920 Ga0207649_10008493 Ga0207649_100084932 683
67 3300025936 Ga0207670_10017842 Ga0207670_100178424 683
68 3300025945 Ga0207679_10000846 Ga0207679_1000084614 683
69 3300026023 Ga0207677_10019414 Ga0207677_100194142 683
70 3300026088 Ga0207641_10072947 Ga0207641_100729472 683
71 3300026095 Ga0207676_10013664 Ga0207676_100136646 683
72 3300026121 Ga0207683_10029160 Ga0207683_100291602 683
73 3300028381 Ga0268264_10072523 Ga0268264_100725232 683
74 3300050493 nmdc:mga0k408_4823_c1 nmdc:mga0k408_4823_c1_4158_6320 683
75 3300006353 Ga0075370_10001149 Ga0075370_1000114911 684
76 3300042876 Ga0451577_0063720 Ga0451577_0063720_362_2485 684
77 3300044712 Ga0453684_0161522 Ga0453684_0161522_126_2249 684
78 3300047472 Ga0495686_0005311 Ga0495686_0005311_493_2718 684
79 3300050496 nmdc:mga07m45_191_c1 nmdc:mga07m45_191_c1_7989_10157 684
80 3300005530 Ga0070679_100005914 Ga0070679_1000059144 685
81 3300025921 Ga0207652_10035189 Ga0207652_100351894 685
82 3300031649 Ga0307514_10057719 Ga0307514_100577191 685
83 3300037471 Ga0395905_0010125 Ga0395905_0010125_5491_7602 685
84 3300003775 Ga0055524_1010042 Ga0055524_10100422 686
85 3300006944 Ga0099823_1000049 Ga0099823_100004937 686
86 3300021361 Ga0213872_10000139 Ga0213872_1000013926 686
87 3300025298 Ga0209050_1002417 Ga0209050_10024178 686
88 3300025299 Ga0209256_1003396 Ga0209256_100339610 686
89 3300025303 Ga0209051_1000755 Ga0209051_100075513 686
90 3300039447 Ga0436361_0062004 Ga0436361_0062004_37691_39889 686
91 3300048905 Ga0496102_0021936 Ga0496102_0021936_1122_3263 686
92 3300005841 Ga0068863_100061288 Ga0068863_1000612882 687
93 3300026088 Ga0207641_10072920 Ga0207641_100729202 687
94 3300028794 Ga0307515_10000830 Ga0307515_100008309 687
95 3300028794 Ga0307515_10011562 Ga0307515_1001156215 687
96 3300028794 Ga0307515_10021637 Ga0307515_100216376 687
97 3300031649 Ga0307514_10019733 Ga0307514_100197335 687
98 3300033180 Ga0307510_10002109 Ga0307510_100021095 687
99 3300046512 Ga0495610_0006100 Ga0495610_0006100_5272_7407 687
100 3300039447 Ga0436361_1123527 Ga0436361_1123527_1886_4048 688
101 3300053118 Ga0500594_0001370 Ga0500594_0001370_121_2271 688
102 3300053177 Ga0500636_0051614 Ga0500636_0051614_144_2294 688
103 iso_pu_bacteria 8015556637 8015557859 688
104 3300005367 Ga0070667_100000623 Ga0070667_10000062333 689
105 3300014968 Ga0157379_10106634 Ga0157379_101066342 689
106 3300021361 Ga0213872_10000102 Ga0213872_1000010229 689
107 3300025986 Ga0207658_10005587 Ga0207658_100055875 689
108 3300039447 Ga0436361_0691793 Ga0436361_0691793_7078_9165 689
109 3300005455 Ga0070663_100037624 Ga0070663_1000376242 690
110 3300005834 Ga0068851_10029611 Ga0068851_100296112 690
111 3300026089 Ga0207648_10065560 Ga0207648_100655602 690
112 3300037466 Ga0395898_0101332 Ga0395898_0101332_634_2745 690
113 3300037471 Ga0395905_0000180 Ga0395905_0000180_10680_12794 690
114 3300037471 Ga0395905_0002881 Ga0395905_0002881_2296_4407 690
115 3300038443 Ga0395901_0051814 Ga0395901_0051814_1374_3512 690
116 3300003759 Ga0055525_1000031 Ga0055525_1000031204 691
117 3300005456 Ga0070678_100007822 Ga0070678_1000078223 691
118 3300012497 Ga0157319_1000003 Ga0157319_1000003274 691
119 3300025230 Ga0209563_100044 Ga0209563_100044273 691
120 3300026121 Ga0207683_10055553 Ga0207683_100555533 691
121 3300027614 Ga0209970_1000485 Ga0209970_10004854 691
122 3300046537 Ga0495598_0006192 Ga0495598_0006192_437_2626 691
123 3300046539 Ga0495621_0010220 Ga0495621_0010220_586_2799 691
124 iso_pu_bacteria 2643221644 2644242946 691
125 3300005364 Ga0070673_100028741 Ga0070673_1000287413 692
126 3300025931 Ga0207644_10075142 Ga0207644_100751422 692
127 3300025940 Ga0207691_10112930 Ga0207691_101129302 692
128 3300025960 Ga0207651_10000163 Ga0207651_1000016314 692
129 3300026067 Ga0207678_10020417 Ga0207678_100204172 692
130 3300026142 Ga0207698_10023530 Ga0207698_100235302 692
131 3300042876 Ga0451577_0015599 Ga0451577_0015599_1635_3770 692
132 iso_pu_bacteria 2585428062 2587755767 692
133 3300005331 Ga0070670_100014457 Ga0070670_1000144575 693
134 3300005364 Ga0070673_100036933 Ga0070673_1000369332 693
135 3300005367 Ga0070667_100066643 Ga0070667_1000666433 693
136 3300005459 Ga0068867_100083109 Ga0068867_1000831091 693
137 3300025893 Ga0207682_10012086 Ga0207682_100120862 693
138 3300025925 Ga0207650_10024743 Ga0207650_100247432 693
139 3300025933 Ga0207706_10084530 Ga0207706_100845302 693
140 3300025960 Ga0207651_10013257 Ga0207651_100132572 693
141 3300026089 Ga0207648_10020570 Ga0207648_100205701 693
142 3300026121 Ga0207683_10067674 Ga0207683_100676743 693
143 3300031730 Ga0307516_10024092 Ga0307516_100240926 693
144 3300049579 Ga0501043_0000053 Ga0501043_0000053_21815_23950 693
145 3300049580 Ga0501046_0000018 Ga0501046_0000018_42339_44474 693
146 3300049581 Ga0501047_0000020 Ga0501047_0000020_81148_83283 693
147 3300049582 Ga0501048_0001721 Ga0501048_0001721_4042_6177 693
148 3300049824 Ga0501045_0005437 Ga0501045_0005437_489_2624 693
149 3300041452 Ga0451793_1883481 Ga0451793_1883481_46_2172 694
150 3300042115 Ga0450911_000121 Ga0450911_000121_1514_3643 694
151 3300042532 Ga0450893_0001705 Ga0450893_0001705_847_3018 694
152 3300046460 Ga0495638_0042852 Ga0495638_0042852_417_2549 694
153 3300046519 Ga0495632_0008762 Ga0495632_0008762_3112_5244 694
154 3300053130 Ga0500642_0009839 Ga0500642_0009839_80_2203 694
155 3300053139 Ga0500568_0004913 Ga0500568_0004913_1337_3469 694
156 3300053156 Ga0500622_0000974 Ga0500622_0000974_21498_23630 694
157 3300061719 Ga0466962_0015011 Ga0466962_0015011_209_2326 694
158 3300003791 Ga0055530_10004437 Ga0055530_100044374 695
159 3300003792 Ga0055540_1000148 Ga0055540_100014881 695
160 3300003794 Ga0055531_10009043 Ga0055531_100090434 695
161 3300006195 Ga0075366_10011626 Ga0075366_100116262 695
162 3300006353 Ga0075370_10019626 Ga0075370_100196263 695
163 3300021361 Ga0213872_10000006 Ga0213872_10000006131 695
164 3300025298 Ga0209050_1000738 Ga0209050_100073865 695
165 3300025303 Ga0209051_1000155 Ga0209051_1000155135 695
166 3300025304 Ga0209257_1000236 Ga0209257_1000236135 695
167 3300037312 Ga0395899_0020299 Ga0395899_0020299_2773_4908 695
168 3300039447 Ga0436361_0301322 Ga0436361_0301322_7892_10033 695
169 3300042531 Ga0450918_000785 Ga0450918_000785_4325_6472 695
170 3300048924 Ga0496121_0005075 Ga0496121_0005075_13558_15690 695
171 3300048928 Ga0496125_0007748 Ga0496125_0007748_7724_9850 695
172 3300050493 nmdc:mga0k408_12461_c1 nmdc:mga0k408_12461_c1_480_2615 695
173 iso_pu_bacteria 2643221660 2644340037 695
174 3300003322 rootL2_10000073 rootL2_1000007317 696
175 3300003775 Ga0055524_1002284 Ga0055524_100228410 696
176 3300003794 Ga0055531_10007420 Ga0055531_100074202 696
177 3300005539 Ga0068853_100019721 Ga0068853_1000197216 696
178 3300005614 Ga0068856_100106051 Ga0068856_1001060512 696
179 3300014745 Ga0157377_10012033 Ga0157377_100120333 696
180 3300014968 Ga0157379_10028671 Ga0157379_100286714 696
181 3300025299 Ga0209256_1001581 Ga0209256_10015812 696
182 3300025304 Ga0209257_1000628 Ga0209257_10006289 696
183 3300025941 Ga0207711_10009773 Ga0207711_100097732 696
184 3300025942 Ga0207689_10015841 Ga0207689_100158414 696
185 3300026095 Ga0207676_10036603 Ga0207676_100366032 696
186 3300026118 Ga0207675_100025268 Ga0207675_1000252682 696
187 3300028794 Ga0307515_10046486 Ga0307515_100464864 696
188 3300028794 Ga0307515_10078098 Ga0307515_100780984 696
189 3300035691 Ga0373931_0003882 Ga0373931_0003882_4177_6366 696
190 3300048904 Ga0496101_0053437 Ga0496101_0053437_712_2901 696
191 3300048913 Ga0496110_0037391 Ga0496110_0037391_377_2566 696
192 3300048927 Ga0496124_0000344 Ga0496124_0000344_14302_16440 696
193 3300048928 Ga0496125_0011607 Ga0496125_0011607_4288_6426 696
194 iso_pu_bacteria 2929520902 2929527210 696
195 iso_pu_bacteria 2643221654 2644301982 697
196 iso_pu_bacteria 2831864461 2831866041 697
197 3300005329 Ga0070683_100008793 Ga0070683_10000879310 698
198 3300005339 Ga0070660_100058586 Ga0070660_1000585862 698
199 3300005535 Ga0070684_100071117 Ga0070684_1000711171 698
200 3300005539 Ga0068853_100111755 Ga0068853_1001117552 698
201 3300005564 Ga0070664_100022426 Ga0070664_1000224264 698
202 3300013105 Ga0157369_10084541 Ga0157369_100845412 698
203 3300025944 Ga0207661_10040009 Ga0207661_100400092 698
204 3300028794 Ga0307515_10026130 Ga0307515_100261303 698
205 3300031507 Ga0307509_10002837 Ga0307509_1000283715 698
206 3300031507 Ga0307509_10004595 Ga0307509_100045953 698
207 3300033180 Ga0307510_10036092 Ga0307510_100360924 698
208 3300050493 nmdc:mga0k408_34686_c1 nmdc:mga0k408_34686_c1_472_2652 698
209 3300005459 Ga0068867_100058127 Ga0068867_1000581272 699
210 3300021361 Ga0213872_10000152 Ga0213872_1000015216 699
211 3300025907 Ga0207645_10012446 Ga0207645_100124462 699
212 3300028794 Ga0307515_10045567 Ga0307515_100455672 699
213 3300031507 Ga0307509_10006686 Ga0307509_1000668620 699
214 3300039447 Ga0436361_0180429 Ga0436361_0180429_7709_9856 699
215 3300039447 Ga0436361_1043116 Ga0436361_1043116_503_2689 699
216 3300047673 Ga0495593_0032637 Ga0495593_0032637_99_2258 699
217 3300053136 Ga0500559_0000069 Ga0500559_0000069_32395_34539 699
218 3300053156 Ga0500622_0000881 Ga0500622_0000881_13786_15930 699
219 3300028786 Ga0307517_10000150 Ga0307517_1000015082 700
220 3300031616 Ga0307508_10001937 Ga0307508_100019375 700
221 3300044712 Ga0453684_0008284 Ga0453684_0008284_16174_18333 700
222 3300046530 Ga0495654_0001638 Ga0495654_0001638_12757_14940 700
223 3300005459 Ga0068867_100000228 Ga0068867_10000022814 701
224 3300009148 Ga0105243_10001277 Ga0105243_100012779 701
225 3300014745 Ga0157377_10000016 Ga0157377_1000001617 701
226 3300025935 Ga0207709_10001251 Ga0207709_100012519 701
227 3300026089 Ga0207648_10000598 Ga0207648_1000059819 701
228 3300031616 Ga0307508_10002030 Ga0307508_1000203018 701
229 3300025972 Ga0207668_10071679 Ga0207668_100716791 705
230 iso_pu_bacteria 2585428057 2587729814 705
231 iso_pu_bacteria 2643221592 2643971096 705
232 iso_pu_bacteria 2643221625 2644138618 705
233 iso_pu_bacteria 2643221648 2644272882 705
234 3300005262 Ga0065165_1000248 Ga0065165_100024840 707
235 iso_pu_bacteria 2585428058 2587732808 708
236 iso_pu_bacteria 2588253510 2588291789 708
237 3300003215 JGI25153J46596_10018506 JGI25153J46596_100185061 709
238 3300025297 Ga0209758_1000057 Ga0209758_1000057251 709
239 3300053086 Ga0500578_0000011 Ga0500578_0000011_182367_184532 709
240 3300053090 Ga0500646_0008236 Ga0500646_0008236_390_2567 709
241 3300006195 Ga0075366_10048557 Ga0075366_100485572 712
242 3300003323 rootH1_10002689 rootH1_100026898 717
243 3300002773 JGI25152J39213_1002013 JGI25152J39213_10020133 718
244 3300003215 JGI25153J46596_10001058 JGI25153J46596_1000105812 718
245 3300025245 Ga0207425_1000387 Ga0207425_10003878 718
246 3300025258 Ga0209129_1000041 Ga0209129_1000041249 718
247 3300025295 Ga0209564_1000029 Ga0209564_1000029395 718
248 3300025297 Ga0209758_1000043 Ga0209758_100004345 718
249 3300025299 Ga0209256_1006348 Ga0209256_10063484 718

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

96

196

0.95

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

271

730

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
8b14-assembly1.cif.gz_A t5 receptor binding protein pb5 in complex with its e. coli receptor fhua 0.894 58 718
3qlb-assembly2.cif.gz_B enantiopyochelin outer membrane tonb-dependent transporter from pseudomonas fluorescens bound to the ferri-enantiopyochelin 0.8868 50 718
1by5-assembly1.cif.gz_A fhua from e. coli, with its ligand ferrichrome 0.8831 49 718
4cu4-assembly1.cif.gz_A fhua from e. coli in complex with the lasso peptide microcin j25 (mccj25) 0.8831 54 718
3qlb-assembly2.cif.gz_B enantiopyochelin outer membrane tonb-dependent transporter from pseudomonas fluorescens bound to the ferri-enantiopyochelin 0.883 50 718
ID Description Score Start End Superfamily
3qlbB02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8972 177 718 2.40.170.20
3qlbB02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8923 177 718 2.40.170.20
1fi1A02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8709 180 718 2.40.170.20
af_P75780_183_760_2.40.170.20 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8505 181 718 2.40.170.20
1xkwA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8454 177 718 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A836ZMD7-F1-model_v4 deleted 0.9095 64 497
AF-A0A848QHW4-F1-model_v4 deleted 0.9046 93 524
AF-A0A5P1R5V0-F1-model_v4 TonB-dependent siderophore receptor 0.9044 162 256 GO:0009279
GO:0015344
AF-A0A5C8SYP7-F1-model_v4 deleted 0.899 67 718
AF-A0A5C8SYP7-F1-model_v4 deleted 0.8949 67 718

Feature Viewer

pLDDT pTM Quality
86.56 0.86 High
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Predicted Structure (AlphaFold2)

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