F360754

General Info

Members Datasets Scaffolds Average Seq Length
249 177 241 450

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10044226|Ga0157372_100442263
Length 535
Sequence MGVPKRADSNCSRSAARIARAGVAPPLDDGSAFGRKIYDGGYVNDIFRAHTIIAQVGLRKNPGKNVAIGAESASDFARPEAFAMQDMTQGPIAGHLVRMSAPIAVGMLFQTLYVLVDLYFVAQLGDAAIAGVSTAGNLQFIVMAATQVLAVGTMALIAQASGRKDQADANLVFNQSLMLALIAGIVTLVGGYMLIGPYMRSVGADAKTAAAGAEYLRWFFPGLALQFALVAMGAALRGTGINKPALLVQMVTVLLNALLAPILIAGWITHVPLGIAGAGLATSISIGFGVILMGIYFHKLEKYVGFDAHLFGARPAVWKRILRIGLPPGGEFALMFCYLAVIYWVIRHFGAEAQAGFGVGSRVMQAIFLPAMAVAFATAPIAGQNVGGGHHDRVRETFRSAVFLGSAIMLLMTLICQIKPEWFVHFFTQDPAVLVVAATFLHIISWNFVAQGIIFTCSGMFQALGNTLPALFSSATRLLTFAIPAIWLSTRPGFELKQLWFLSVATVTLQALTSLWLLRGQFRRRLVARTAPATA

Samples

Sample ID Description Type Environment
1 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
2 2643221559 Lysobacter sp. Root559 Isolate Unclassified
3 2643221573 Lysobacter sp. Root604 Isolate Unclassified
4 2643221586 Lysobacter sp. Root667 Isolate Unclassified
5 2643221612 Lysobacter sp. Root76 Isolate Unclassified
6 2643221720 Lysobacter sp. Root916 Isolate Unclassified
7 2643221727 Lysobacter sp. Root96 Isolate Unclassified
8 2643221728 Lysobacter sp. Root983 Isolate Unclassified
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
91 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
96 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
106 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
107 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
108 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
109 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
114 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
125 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
126 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
127 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
128 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
129 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
144 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
147 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
151 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
152 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
155 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
159 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
160 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
161 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
165 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
166 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
167 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
168 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
169 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
171 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
172 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
173 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
176 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
177 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.79
Metatranscriptomes 0
Isolates 3.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.02
Nodule 0
Rhizoplane 3.21
Rhizosphere 79.12
Stem 0
Stem Tuber 0
Unclassified 11.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10081883 3300005295 Bacteria 31639
2 Ga0070670_100165942 3300005331 Bacteria 1914
3 Ga0070666_10043655 3300005335 Bacteria 3002
4 Ga0070687_100098618 3300005343 Bacteria 1631
5 Ga0070661_100010896 3300005344 Bacteria 6332
6 Ga0070668_100055958 3300005347 Bacteria 3045
7 Ga0070667_100011749 3300005367 Bacteria 7235
8 Ga0070667_100026395 3300005367 Bacteria 4832
9 Ga0070667_100134325 3300005367 Unclassified 2162
10 Ga0070705_100021562 3300005440 Bacteria 3429
11 Ga0070705_100106529 3300005440 Bacteria 1782
12 Ga0070700_100076019 3300005441 Bacteria 2156
13 Ga0070663_100063596 3300005455 Bacteria 2665
14 Ga0070681_10021569 3300005458 Bacteria 6456
15 Ga0068867_100095119 3300005459 Bacteria 2266
16 Ga0070698_100001752 3300005471 Bacteria 24212
17 Ga0068853_100005984 3300005539 Bacteria 9616
18 Ga0070665_100000108 3300005548 Bacteria 155204
19 Ga0070665_100020523 3300005548 Bacteria 6637
20 Ga0068855_100007881 3300005563 Bacteria 12864
21 Ga0070664_100172307 3300005564 Bacteria 1920
22 Ga0068859_100009961 3300005617 Bacteria 9588
23 Ga0068859_100023355 3300005617 Bacteria 6207
24 Ga0068859_100063017 3300005617 Bacteria 3738
25 Ga0068864_100065591 3300005618 Bacteria 3150
26 Ga0068861_100005117 3300005719 Bacteria 8844
27 Ga0068861_100235024 3300005719 Bacteria 1556
28 Ga0068863_100015769 3300005841 Bacteria 7255
29 Ga0068863_100108960 3300005841 Bacteria 2636
30 Ga0068858_100000357 3300005842 Bacteria 48180
31 Ga0068858_100002399 3300005842 Bacteria 18946
32 Ga0068860_100001533 3300005843 Bacteria 24890
33 Ga0068860_100013580 3300005843 Bacteria 7985
34 Ga0068862_100000483 3300005844 Bacteria 42523
35 Ga0068862_100046137 3300005844 Unclassified 3719
36 Ga0081455_10009322 3300005937 Bacteria 10103
37 Ga0081540_1008973 3300005983 Bacteria 6918
38 Ga0081539_10000006 3300005985 Bacteria 534555
39 Ga0075364_10005239 3300006051 Bacteria 7523
40 Ga0075362_10062923 3300006177 Bacteria 1682
41 Ga0097621_100083606 3300006237 Bacteria 2660
42 Ga0097621_100232987 3300006237 Bacteria 1608
43 Ga0075428_100001011 3300006844 Bacteria 29818
44 Ga0075431_100000002 3300006847 Bacteria 153069
45 Ga0075431_100003512 3300006847 Bacteria 15185
46 Ga0075429_100002471 3300006880 Bacteria 15543
47 Ga0068865_100117602 3300006881 Bacteria 1971
48 Ga0097620_100009962 3300006931 Bacteria 9588
49 Ga0097620_100023355 3300006931 Bacteria 6207
50 Ga0097620_100063018 3300006931 Bacteria 3738
51 Ga0105240_10272776 3300009093 Bacteria 1947
52 Ga0111539_10001280 3300009094 Bacteria 33589
53 Ga0111539_10035299 3300009094 Bacteria 6055
54 Ga0105245_10275656 3300009098 Bacteria 1642
55 Ga0105247_10003103 3300009101 Bacteria 10984
56 Ga0105247_10054670 3300009101 Bacteria 2463
57 Ga0114129_10003222 3300009147 Bacteria 22898
58 Ga0105242_10026651 3300009176 Bacteria 4582
59 Ga0105248_10305306 3300009177 Unclassified 1792
60 Ga0105237_10040202 3300009545 Bacteria 4717
61 Ga0105238_10054620 3300009551 Bacteria 4011
62 Ga0105249_10017983 3300009553 Bacteria 6282
63 Ga0105239_10064936 3300010375 Bacteria 4007
64 Ga0105239_10259450 3300010375 Bacteria 1953
65 Ga0157374_10056196 3300013296 Bacteria 3674
66 Ga0157374_10116048 3300013296 Bacteria 2579
67 Ga0163162_10040575 3300013306 Bacteria 4655
68 Ga0157372_10044226 3300013307 Bacteria 4934
69 Ga0163163_10127207 3300014325 Bacteria 2586
70 Ga0163163_10254651 3300014325 Bacteria 1806
71 Ga0157380_10000082 3300014326 Bacteria 52725
72 Ga0157379_10001280 3300014968 Bacteria 20454
73 Ga0157379_10071209 3300014968 Bacteria 3111
74 Ga0157379_10072337 3300014968 Bacteria 3084
75 Ga0157376_10051486 3300014969 Bacteria 3421
76 Ga0207710_10000134 3300025900 Bacteria 87269
77 Ga0207707_10039566 3300025912 Bacteria 4121
78 Ga0207695_10136651 3300025913 Bacteria 2404
79 Ga0207662_10029857 3300025918 Bacteria 3161
80 Ga0207659_10134451 3300025926 Unclassified 1913
81 Ga0207644_10006534 3300025931 Bacteria 7602
82 Ga0207686_10139158 3300025934 Bacteria 1675
83 Ga0207670_10010006 3300025936 Bacteria 5440
84 Ga0207704_10046035 3300025938 Bacteria 2597
85 Ga0207689_10072119 3300025942 Bacteria 2837
86 Ga0207667_10003604 3300025949 Bacteria 19109
87 Ga0207651_10154663 3300025960 Unclassified 1790
88 Ga0207712_10070425 3300025961 Unclassified 2512
89 Ga0207668_10009409 3300025972 Bacteria 5856
90 Ga0207677_10099292 3300026023 Bacteria 2138
91 Ga0207703_10004193 3300026035 Bacteria 11885
92 Ga0207703_10004239 3300026035 Bacteria 11811
93 Ga0207703_10318226 3300026035 Bacteria 1424
94 Ga0207639_10000158 3300026041 Bacteria 51667
95 Ga0207639_10038014 3300026041 Bacteria 3578
96 Ga0207639_10046314 3300026041 Bacteria 3281
97 Ga0207678_10030396 3300026067 Bacteria 4716
98 Ga0207702_10088441 3300026078 Bacteria 2706
99 Ga0207641_10000312 3300026088 Bacteria 60630
100 Ga0207641_10012164 3300026088 Bacteria 7063
101 Ga0207648_10128993 3300026089 Bacteria 2225
102 Ga0207676_10024534 3300026095 Bacteria 4464
103 Ga0207675_100003545 3300026118 Bacteria 15220
104 Ga0207675_100119503 3300026118 Bacteria 2493
105 Ga0207428_10006499 3300027907 Bacteria 10789
106 Ga0207428_10011612 3300027907 Bacteria 7774
107 Ga0268266_10000001 3300028379 Bacteria 4040580
108 Ga0268266_10010637 3300028379 Bacteria 8016
109 Ga0268266_10056920 3300028379 Bacteria 3363
110 Ga0268266_10057834 3300028379 Bacteria 3337
111 Ga0268265_10006085 3300028380 Bacteria 8195
112 Ga0268265_10092491 3300028380 Bacteria 2421
113 Ga0268264_10000736 3300028381 Bacteria 37406
114 Ga0268264_10101282 3300028381 Bacteria 2503
115 Ga0307515_10043685 3300028794 Bacteria 6956
116 Ga0307511_10037053 3300030521 Bacteria 4222
117 Ga0307509_10000114 3300031507 Bacteria 116573
118 Ga0307509_10000167 3300031507 Bacteria 103177
119 Ga0307509_10145502 3300031507 Unclassified 2297
120 Ga0307408_100034307 3300031548 Bacteria 3554
121 Ga0307408_100177297 3300031548 Bacteria 1706
122 Ga0307516_10093987 3300031730 Bacteria 2823
123 Ga0307405_10031508 3300031731 Bacteria 3123
124 Ga0307406_10097121 3300031901 Bacteria 1997
125 Ga0307407_10166697 3300031903 Bacteria 1447
126 Ga0307412_10013532 3300031911 Bacteria 4787
127 Ga0307416_100036940 3300032002 Bacteria 3753
128 Ga0307411_10095978 3300032005 Bacteria 2083
129 Ga0307510_10000009 3300033180 Bacteria 409702
130 Ga0316574_0055588 3300035398 Bacteria 2474
131 Ga0373935_0065964 3300035692 Archaea 2324
132 Ga0373947_0002880 3300035725 Bacteria 10275
133 Ga0436365_1191715 3300039437 Bacteria 2143
134 Ga0439439_0000369 3300041406 Bacteria 7376
135 Ga0439447_001717 3300041407 Bacteria 8039
136 Ga0451802_0545581 3300041460 Bacteria 2844
137 Ga0451802_2075230 3300041460 Bacteria 1665
138 Ga0451807_0292208 3300041486 Bacteria 3163
139 Ga0451807_1368524 3300041486 Unclassified 2016
140 Ga0451853_0271288 3300041512 Bacteria 3464
141 Ga0451577_0024344 3300042876 Bacteria 5508
142 Ga0451576_0044038 3300045051 Bacteria 4706
143 Ga0451576_0123814 3300045051 Bacteria 2693
144 Ga0495638_0003471 3300046460 Bacteria 12385
145 Ga0495582_0062847 3300046473 Bacteria 2051
146 Ga0495632_0067813 3300046519 Unclassified 1720
147 Ga0495668_0001792 3300046616 Bacteria 19626
148 Ga0495625_0002797 3300046660 Bacteria 18395
149 Ga0495658_0004870 3300046683 Bacteria 6589
150 Ga0495613_0076006 3300046689 Bacteria 2445
151 Ga0495581_0016580 3300047315 Bacteria 4282
152 Ga0496102_0008530 3300048905 Bacteria 8787
153 Ga0496103_0012778 3300048906 Bacteria 4980
154 Ga0496112_0040657 3300048915 Bacteria 4547
155 Ga0496115_0025014 3300048918 Bacteria 4645
156 Ga0496117_0000099 3300048920 Bacteria 194987
157 Ga0496118_0000105 3300048921 Bacteria 156739
158 Ga0496119_0004978 3300048922 Bacteria 12967
159 Ga0496119_0056713 3300048922 Bacteria 2372
160 Ga0496119_0099132 3300048922 Bacteria 1639
161 Ga0496120_0000612 3300048923 Bacteria 54154
162 Ga0496121_0000772 3300048924 Bacteria 58665
163 Ga0496121_0120986 3300048924 Bacteria 1977
164 Ga0496125_0000186 3300048928 Bacteria 135128
165 Ga0496125_0002005 3300048928 Bacteria 27612
166 Ga0496125_0031262 3300048928 Bacteria 4746
167 Ga0496126_0027501 3300048929 Bacteria 5431
168 Ga0496126_0052608 3300048929 Bacteria 3700
169 Ga0501032_0003860 3300049569 Bacteria 11378
170 Ga0501033_0000720 3300049570 Bacteria 30337
171 Ga0501033_0022112 3300049570 Bacteria 4797
172 Ga0501033_0065613 3300049570 Bacteria 2671
173 Ga0501034_0004188 3300049571 Bacteria 16100
174 Ga0501034_0035389 3300049571 Bacteria 5062
175 Ga0501036_0003787 3300049572 Bacteria 12126
176 Ga0501037_0002331 3300049573 Bacteria 13712
177 Ga0501038_0002493 3300049574 Bacteria 17137
178 Ga0501038_0004437 3300049574 Bacteria 13039
179 Ga0501038_0031354 3300049574 Bacteria 4698
180 Ga0501039_0002430 3300049575 Bacteria 13866
181 Ga0501039_0037221 3300049575 Bacteria 3755
182 Ga0501039_0047175 3300049575 Bacteria 3329
183 Ga0501040_0002062 3300049576 Bacteria 12958
184 Ga0501041_0002035 3300049577 Bacteria 11379
185 Ga0501042_0081071 3300049578 Bacteria 2325
186 Ga0501042_0105165 3300049578 Bacteria 2031
187 Ga0501046_0002962 3300049580 Bacteria 15706
188 Ga0501046_0005450 3300049580 Bacteria 11375
189 Ga0501048_0004273 3300049582 Bacteria 10884
190 Ga0501067_0020419 3300049583 Bacteria 3666
191 Ga0501068_0015829 3300049584 Bacteria 4341
192 Ga0501069_0000847 3300049585 Bacteria 14476
193 Ga0501071_0050580 3300049587 Bacteria 2993
194 Ga0501072_0000724 3300049588 Bacteria 24019
195 Ga0501073_0003125 3300049589 Bacteria 12413
196 Ga0501074_0018891 3300049590 Bacteria 5006
197 Ga0501074_0031573 3300049590 Bacteria 3837
198 Ga0501076_0000102 3300049592 Bacteria 46456
199 Ga0501076_0040504 3300049592 Bacteria 3662
200 Ga0501077_0051441 3300049593 Bacteria 2618
201 Ga0501079_0003019 3300049741 Bacteria 12307
202 Ga0501080_0000517 3300049742 Bacteria 30417
203 Ga0501080_0002682 3300049742 Bacteria 15585
204 Ga0501080_0097137 3300049742 Bacteria 2735
205 Ga0501080_0141231 3300049742 Bacteria 2226
206 Ga0501080_0146548 3300049742 Bacteria 2182
207 Ga0501080_0228445 3300049742 Bacteria 1701
208 Ga0501081_0002420 3300049743 Bacteria 11776
209 Ga0501083_0034550 3300049744 Bacteria 3456
210 Ga0501083_0051700 3300049744 Bacteria 2763
211 Ga0501035_0050666 3300049822 Bacteria 3720
212 Ga0501044_0004235 3300049823 Bacteria 16109
213 Ga0501044_0061469 3300049823 Bacteria 3842
214 Ga0501044_0180368 3300049823 Bacteria 2079
215 Ga0501045_0000103 3300049824 Bacteria 41796
216 nmdc:mga00v17_45539_c1 3300050491 Bacteria 2651
217 nmdc:mga09592_1111_c1 3300050508 Bacteria 21402
218 nmdc:mga0qj67_44554_c1 3300050509 Bacteria 3497
219 nmdc:mga06r32_2734_c1 3300050510 Bacteria 15771
220 nmdc:mga06r32_862_c1 3300050510 Bacteria 26958
221 nmdc:mga08y16_140025_c1 3300050511 Bacteria 2515
222 nmdc:mga08y16_15861_c1 3300050511 Bacteria 7919
223 nmdc:mga08y16_16225_c1 3300050511 Bacteria 7832
224 Ga0500610_0005589 3300053079 Bacteria 5174
225 Ga0500583_0016651 3300053092 Unclassified 2940
226 Ga0500583_0028825 3300053092 Bacteria 2413
227 Ga0500651_0058707 3300053093 Bacteria 2406
228 Ga0500562_008419 3300053108 Unclassified 2606
229 Ga0500642_0001932 3300053130 Bacteria 6005
230 Ga0500655_000081 3300053133 Bacteria 25123
231 Ga0500616_0000064 3300053153 Bacteria 243072
232 Ga0500622_0050831 3300053156 Bacteria 2134
233 Ga0500639_043257 3300053163 Bacteria 2362
234 Ga0500570_000014 3300053724 Bacteria 52194
235 Ga0501084_0003859 3300054114 Bacteria 12203
236 Ga0501084_0039810 3300054114 Bacteria 3931
237 Ga0501084_0042647 3300054114 Bacteria 3795
238 Ga0500661_003559 3300055283 Bacteria 2924
239 Ga0501082_0004842 3300060353 Bacteria 11738
240 Ga0501082_0073192 3300060353 Bacteria 2951
241 Ga0530510_0037491 3300061734 Bacteria 3497

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009101 Ga0105247_10003103 Ga0105247_100031034 423
2 3300014325 Ga0163163_10254651 Ga0163163_102546512 423
3 3300048915 Ga0496112_0040657 Ga0496112_0040657_1761_3083 423
4 3300048924 Ga0496121_0000772 Ga0496121_0000772_4711_6033 423
5 3300048928 Ga0496125_0002005 Ga0496125_0002005_6128_7450 423
6 3300049571 Ga0501034_0035389 Ga0501034_0035389_1749_3179 426
7 3300049744 Ga0501083_0034550 Ga0501083_0034550_242_1672 426
8 3300061734 Ga0530510_0037491 Ga0530510_0037491_870_2300 426
9 3300005343 Ga0070687_100098618 Ga0070687_1000986181 427
10 3300025934 Ga0207686_10139158 Ga0207686_101391581 428
11 3300053093 Ga0500651_0058707 Ga0500651_0058707_951_2318 428
12 3300005719 Ga0068861_100235024 Ga0068861_1002350242 429
13 3300033180 Ga0307510_10000009 Ga0307510_10000009164 429
14 3300049742 Ga0501080_0228445 Ga0501080_0228445_393_1688 431
15 3300053092 Ga0500583_0028825 Ga0500583_0028825_1094_2392 431
16 3300005471 Ga0070698_100001752 Ga0070698_10000175210 432
17 3300005983 Ga0081540_1008973 Ga0081540_10089733 432
18 3300049569 Ga0501032_0003860 Ga0501032_0003860_683_2041 433
19 3300049570 Ga0501033_0000720 Ga0501033_0000720_7880_9238 433
20 3300049571 Ga0501034_0004188 Ga0501034_0004188_8008_9366 433
21 3300049573 Ga0501037_0002331 Ga0501037_0002331_11876_13234 433
22 3300049574 Ga0501038_0004437 Ga0501038_0004437_5756_7114 433
23 3300049575 Ga0501039_0002430 Ga0501039_0002430_10123_11481 433
24 3300049580 Ga0501046_0002962 Ga0501046_0002962_12564_13922 433
25 3300049589 Ga0501073_0003125 Ga0501073_0003125_7073_8431 433
26 3300049590 Ga0501074_0018891 Ga0501074_0018891_2902_4260 433
27 3300049742 Ga0501080_0002682 Ga0501080_0002682_9274_10632 433
28 3300025926 Ga0207659_10134451 Ga0207659_101344513 434
29 3300028380 Ga0268265_10092491 Ga0268265_100924913 434
30 3300014968 Ga0157379_10001280 Ga0157379_1000128010 436
31 3300005367 Ga0070667_100026395 Ga0070667_1000263954 437
32 3300005548 Ga0070665_100000108 Ga0070665_10000010895 437
33 3300028379 Ga0268266_10000001 Ga0268266_100000011940 437
34 3300005367 Ga0070667_100011749 Ga0070667_1000117493 438
35 3300005617 Ga0068859_100009961 Ga0068859_1000099614 438
36 3300005841 Ga0068863_100015769 Ga0068863_1000157693 438
37 3300005842 Ga0068858_100000357 Ga0068858_1000003576 438
38 3300006931 Ga0097620_100009962 Ga0097620_1000099624 438
39 3300025900 Ga0207710_10000134 Ga0207710_1000013427 438
40 3300025931 Ga0207644_10006534 Ga0207644_100065349 438
41 3300026035 Ga0207703_10004239 Ga0207703_100042396 438
42 3300026088 Ga0207641_10012164 Ga0207641_100121645 438
43 3300005937 Ga0081455_10009322 Ga0081455_100093225 439
44 3300053092 Ga0500583_0016651 Ga0500583_0016651_1114_2436 439
45 3300053108 Ga0500562_008419 Ga0500562_008419_344_1666 439
46 3300046473 Ga0495582_0062847 Ga0495582_0062847_288_1610 440
47 3300046683 Ga0495658_0004870 Ga0495658_0004870_465_1787 440
48 3300046689 Ga0495613_0076006 Ga0495613_0076006_352_1674 440
49 3300053130 Ga0500642_0001932 Ga0500642_0001932_2181_3506 440
50 3300053133 Ga0500655_000081 Ga0500655_000081_18451_19776 440
51 3300053163 Ga0500639_043257 Ga0500639_043257_470_1795 440
52 3300053724 Ga0500570_000014 Ga0500570_000014_23651_24976 440
53 3300005719 Ga0068861_100005117 Ga0068861_1000051173 441
54 3300009176 Ga0105242_10026651 Ga0105242_100266513 441
55 3300026118 Ga0207675_100003545 Ga0207675_1000035457 441
56 3300028381 Ga0268264_10101282 Ga0268264_101012823 441
57 3300046660 Ga0495625_0002797 Ga0495625_0002797_16626_17951 441
58 3300031548 Ga0307408_100177297 Ga0307408_1001772971 442
59 3300031731 Ga0307405_10031508 Ga0307405_100315082 442
60 3300031901 Ga0307406_10097121 Ga0307406_100971212 442
61 3300031903 Ga0307407_10166697 Ga0307407_101666971 442
62 3300031911 Ga0307412_10013532 Ga0307412_100135322 442
63 3300032002 Ga0307416_100036940 Ga0307416_1000369402 442
64 3300032005 Ga0307411_10095978 Ga0307411_100959782 442
65 3300006177 Ga0075362_10062923 Ga0075362_100629231 444
66 3300025960 Ga0207651_10154663 Ga0207651_101546632 444
67 3300006051 Ga0075364_10005239 Ga0075364_100052397 445
68 3300050491 nmdc:mga00v17_45539_c1 nmdc:mga00v17_45539_c1_1086_2423 445
69 3300025936 Ga0207670_10010006 Ga0207670_100100063 446
70 3300031507 Ga0307509_10145502 Ga0307509_101455022 446
71 3300049570 Ga0501033_0065613 Ga0501033_0065613_665_2011 446
72 3300049572 Ga0501036_0003787 Ga0501036_0003787_10018_11358 446
73 3300049574 Ga0501038_0002493 Ga0501038_0002493_6077_7417 446
74 3300049575 Ga0501039_0037221 Ga0501039_0037221_501_1847 446
75 3300049575 Ga0501039_0047175 Ga0501039_0047175_1317_2657 446
76 3300049576 Ga0501040_0002062 Ga0501040_0002062_4352_5692 446
77 3300049577 Ga0501041_0002035 Ga0501041_0002035_9640_10980 446
78 3300049578 Ga0501042_0081071 Ga0501042_0081071_12_1352 446
79 3300049578 Ga0501042_0105165 Ga0501042_0105165_56_1402 446
80 3300049580 Ga0501046_0005450 Ga0501046_0005450_8691_10031 446
81 3300049582 Ga0501048_0004273 Ga0501048_0004273_764_2104 446
82 3300049584 Ga0501068_0015829 Ga0501068_0015829_385_1725 446
83 3300049587 Ga0501071_0050580 Ga0501071_0050580_809_2149 446
84 3300049588 Ga0501072_0000724 Ga0501072_0000724_13009_14349 446
85 3300049590 Ga0501074_0031573 Ga0501074_0031573_2467_3807 446
86 3300049592 Ga0501076_0000102 Ga0501076_0000102_38101_39441 446
87 3300049592 Ga0501076_0040504 Ga0501076_0040504_1920_3266 446
88 3300049741 Ga0501079_0003019 Ga0501079_0003019_10633_11973 446
89 3300049742 Ga0501080_0000517 Ga0501080_0000517_28302_29642 446
90 3300049743 Ga0501081_0002420 Ga0501081_0002420_739_2079 446
91 3300049744 Ga0501083_0051700 Ga0501083_0051700_728_2074 446
92 3300049822 Ga0501035_0050666 Ga0501035_0050666_1729_3069 446
93 3300049824 Ga0501045_0000103 Ga0501045_0000103_88_1428 446
94 3300053153 Ga0500616_0000064 Ga0500616_0000064_150694_152058 446
95 3300054114 Ga0501084_0003859 Ga0501084_0003859_10011_11351 446
96 3300060353 Ga0501082_0073192 Ga0501082_0073192_743_2083 446
97 3300039437 Ga0436365_1191715 Ga0436365_1191715_605_1972 447
98 3300041407 Ga0439447_001717 Ga0439447_001717_6429_7790 447
99 3300045051 Ga0451576_0044038 Ga0451576_0044038_2657_4000 447
100 3300046616 Ga0495668_0001792 Ga0495668_0001792_11511_12872 447
101 iso_pu_bacteria 2643221573 2643881273 447
102 iso_pu_bacteria 2643221720 2644662048 447
103 iso_pu_bacteria 2643221728 2644700184 447
104 3300025972 Ga0207668_10009409 Ga0207668_100094094 448
105 3300042876 Ga0451577_0024344 Ga0451577_0024344_1013_2389 448
106 3300045051 Ga0451576_0123814 Ga0451576_0123814_953_2329 448
107 iso_pu_bacteria 2643221559 2643816993 448
108 iso_pu_bacteria 2643221586 2643939414 448
109 iso_pu_bacteria 2643221612 2644078095 448
110 iso_pu_bacteria 2643221727 2644696397 448
111 3300031507 Ga0307509_10000167 Ga0307509_1000016766 449
112 3300005331 Ga0070670_100165942 Ga0070670_1001659422 450
113 3300005335 Ga0070666_10043655 Ga0070666_100436551 450
114 3300005344 Ga0070661_100010896 Ga0070661_1000108965 450
115 3300005347 Ga0070668_100055958 Ga0070668_1000559582 450
116 3300005367 Ga0070667_100134325 Ga0070667_1001343252 450
117 3300005441 Ga0070700_100076019 Ga0070700_1000760192 450
118 3300005455 Ga0070663_100063596 Ga0070663_1000635962 450
119 3300005458 Ga0070681_10021569 Ga0070681_100215693 450
120 3300005459 Ga0068867_100095119 Ga0068867_1000951192 450
121 3300005617 Ga0068859_100023355 Ga0068859_1000233553 450
122 3300005617 Ga0068859_100063017 Ga0068859_1000630172 450
123 3300005618 Ga0068864_100065591 Ga0068864_1000655913 450
124 3300005841 Ga0068863_100108960 Ga0068863_1001089602 450
125 3300005842 Ga0068858_100002399 Ga0068858_1000023999 450
126 3300005843 Ga0068860_100001533 Ga0068860_1000015333 450
127 3300005843 Ga0068860_100013580 Ga0068860_1000135806 450
128 3300005844 Ga0068862_100000483 Ga0068862_1000004832 450
129 3300006237 Ga0097621_100083606 Ga0097621_1000836063 450
130 3300006237 Ga0097621_100232987 Ga0097621_1002329872 450
131 3300006881 Ga0068865_100117602 Ga0068865_1001176022 450
132 3300006931 Ga0097620_100023355 Ga0097620_1000233553 450
133 3300006931 Ga0097620_100063018 Ga0097620_1000630182 450
134 3300009093 Ga0105240_10272776 Ga0105240_102727761 450
135 3300009098 Ga0105245_10275656 Ga0105245_102756562 450
136 3300009101 Ga0105247_10054670 Ga0105247_100546702 450
137 3300009177 Ga0105248_10305306 Ga0105248_103053061 450
138 3300009545 Ga0105237_10040202 Ga0105237_100402022 450
139 3300009551 Ga0105238_10054620 Ga0105238_100546203 450
140 3300010375 Ga0105239_10259450 Ga0105239_102594502 450
141 3300013296 Ga0157374_10056196 Ga0157374_100561963 450
142 3300013296 Ga0157374_10116048 Ga0157374_101160483 450
143 3300013306 Ga0163162_10040575 Ga0163162_100405755 450
144 3300013307 Ga0157372_10044226 Ga0157372_100442263 450
145 3300014325 Ga0163163_10127207 Ga0163163_101272072 450
146 3300014326 Ga0157380_10000082 Ga0157380_1000008212 450
147 3300014968 Ga0157379_10071209 Ga0157379_100712092 450
148 3300014968 Ga0157379_10072337 Ga0157379_100723372 450
149 3300014969 Ga0157376_10051486 Ga0157376_100514863 450
150 3300025912 Ga0207707_10039566 Ga0207707_100395663 450
151 3300025913 Ga0207695_10136651 Ga0207695_101366512 450
152 3300025938 Ga0207704_10046035 Ga0207704_100460352 450
153 3300025942 Ga0207689_10072119 Ga0207689_100721193 450
154 3300025961 Ga0207712_10070425 Ga0207712_100704252 450
155 3300026035 Ga0207703_10004193 Ga0207703_100041938 450
156 3300026035 Ga0207703_10318226 Ga0207703_103182261 450
157 3300026041 Ga0207639_10046314 Ga0207639_100463143 450
158 3300026067 Ga0207678_10030396 Ga0207678_100303963 450
159 3300026078 Ga0207702_10088441 Ga0207702_100884412 450
160 3300026088 Ga0207641_10000312 Ga0207641_1000031233 450
161 3300026089 Ga0207648_10128993 Ga0207648_101289931 450
162 3300026095 Ga0207676_10024534 Ga0207676_100245342 450
163 3300026118 Ga0207675_100119503 Ga0207675_1001195033 450
164 3300028379 Ga0268266_10057834 Ga0268266_100578343 450
165 3300028380 Ga0268265_10006085 Ga0268265_100060857 450
166 3300028381 Ga0268264_10000736 Ga0268264_1000073624 450
167 3300030521 Ga0307511_10037053 Ga0307511_100370532 450
168 3300041460 Ga0451802_0545581 Ga0451802_0545581_351_1709 450
169 3300041486 Ga0451807_0292208 Ga0451807_0292208_1272_2630 450
170 3300041512 Ga0451853_0271288 Ga0451853_0271288_1470_2828 450
171 3300046519 Ga0495632_0067813 Ga0495632_0067813_139_1497 450
172 3300048905 Ga0496102_0008530 Ga0496102_0008530_5053_6420 450
173 3300048906 Ga0496103_0012778 Ga0496103_0012778_1717_3084 450
174 3300048918 Ga0496115_0025014 Ga0496115_0025014_476_1843 450
175 3300048920 Ga0496117_0000099 Ga0496117_0000099_13657_15024 450
176 3300048921 Ga0496118_0000105 Ga0496118_0000105_66646_68013 450
177 3300048922 Ga0496119_0004978 Ga0496119_0004978_2202_3560 450
178 3300048922 Ga0496119_0056713 Ga0496119_0056713_568_1926 450
179 3300048922 Ga0496119_0099132 Ga0496119_0099132_194_1561 450
180 3300048923 Ga0496120_0000612 Ga0496120_0000612_27656_29014 450
181 3300048924 Ga0496121_0120986 Ga0496121_0120986_88_1455 450
182 3300048928 Ga0496125_0000186 Ga0496125_0000186_36897_38255 450
183 3300048928 Ga0496125_0031262 Ga0496125_0031262_666_2024 450
184 3300048929 Ga0496126_0027501 Ga0496126_0027501_168_1535 450
185 3300048929 Ga0496126_0052608 Ga0496126_0052608_1358_2716 450
186 3300049570 Ga0501033_0022112 Ga0501033_0022112_1619_3049 450
187 3300049574 Ga0501038_0031354 Ga0501038_0031354_1771_3129 450
188 3300049583 Ga0501067_0020419 Ga0501067_0020419_824_2254 450
189 3300049585 Ga0501069_0000847 Ga0501069_0000847_12972_14402 450
190 3300049742 Ga0501080_0097137 Ga0501080_0097137_1038_2396 450
191 3300049742 Ga0501080_0141231 Ga0501080_0141231_612_1970 450
192 3300049742 Ga0501080_0146548 Ga0501080_0146548_808_2169 450
193 3300049823 Ga0501044_0004235 Ga0501044_0004235_11961_13319 450
194 3300049823 Ga0501044_0061469 Ga0501044_0061469_650_2080 450
195 3300049823 Ga0501044_0180368 Ga0501044_0180368_443_1801 450
196 3300054114 Ga0501084_0039810 Ga0501084_0039810_2184_3614 450
197 3300054114 Ga0501084_0042647 Ga0501084_0042647_219_1577 450
198 3300055283 Ga0500661_003559 Ga0500661_003559_745_2103 450
199 3300060353 Ga0501082_0004842 Ga0501082_0004842_8759_10117 450
200 3300005440 Ga0070705_100021562 Ga0070705_1000215623 451
201 3300005548 Ga0070665_100020523 Ga0070665_1000205233 451
202 3300005985 Ga0081539_10000006 Ga0081539_10000006296 451
203 3300009553 Ga0105249_10017983 Ga0105249_100179833 451
204 3300028379 Ga0268266_10010637 Ga0268266_100106373 451
205 iso_pu_bacteria 2571042365 2572254292 451
206 3300005539 Ga0068853_100005984 Ga0068853_1000059847 452
207 3300005563 Ga0068855_100007881 Ga0068855_1000078817 452
208 3300005564 Ga0070664_100172307 Ga0070664_1001723072 452
209 3300010375 Ga0105239_10064936 Ga0105239_100649361 452
210 3300025949 Ga0207667_10003604 Ga0207667_100036042 452
211 3300026041 Ga0207639_10000158 Ga0207639_1000015823 452
212 3300026041 Ga0207639_10038014 Ga0207639_100380142 452
213 3300028379 Ga0268266_10056920 Ga0268266_100569203 452
214 3300041406 Ga0439439_0000369 Ga0439439_0000369_477_1835 452
215 3300053079 Ga0500610_0005589 Ga0500610_0005589_3529_4887 452
216 3300006847 Ga0075431_100003512 Ga0075431_10000351213 453
217 3300026023 Ga0207677_10099292 Ga0207677_100992922 453
218 3300027907 Ga0207428_10011612 Ga0207428_100116128 453
219 3300031507 Ga0307509_10000114 Ga0307509_1000011483 453
220 3300031548 Ga0307408_100034307 Ga0307408_1000343072 453
221 3300035398 Ga0316574_0055588 Ga0316574_0055588_464_1825 453
222 3300041460 Ga0451802_2075230 Ga0451802_2075230_45_1463 453
223 3300041486 Ga0451807_1368524 Ga0451807_1368524_516_1934 453
224 3300047315 Ga0495581_0016580 Ga0495581_0016580_1924_3288 453
225 3300050509 nmdc:mga0qj67_44554_c1 nmdc:mga0qj67_44554_c1_1706_3067 453
226 3300050510 nmdc:mga06r32_2734_c1 nmdc:mga06r32_2734_c1_5264_6658 453
227 3300050511 nmdc:mga08y16_16225_c1 nmdc:mga08y16_16225_c1_5237_6604 453
228 3300025918 Ga0207662_10029857 Ga0207662_100298572 454
229 3300028794 Ga0307515_10043685 Ga0307515_100436853 454
230 3300031730 Ga0307516_10093987 Ga0307516_100939873 454
231 3300049593 Ga0501077_0051441 Ga0501077_0051441_393_1766 454
232 3300053156 Ga0500622_0050831 Ga0500622_0050831_166_1536 454
233 3300005440 Ga0070705_100106529 Ga0070705_1001065292 455
234 3300005844 Ga0068862_100046137 Ga0068862_1000461373 455
235 3300006844 Ga0075428_100001011 Ga0075428_10000101122 455
236 3300006847 Ga0075431_100000002 Ga0075431_10000000242 455
237 3300006880 Ga0075429_100002471 Ga0075429_1000024714 455
238 3300009094 Ga0111539_10001280 Ga0111539_1000128030 455
239 3300009094 Ga0111539_10035299 Ga0111539_100352992 455
240 3300009147 Ga0114129_10003222 Ga0114129_1000322212 455
241 3300027907 Ga0207428_10006499 Ga0207428_100064997 455
242 3300035692 Ga0373935_0065964 Ga0373935_0065964_741_2108 455
243 3300035725 Ga0373947_0002880 Ga0373947_0002880_2727_4094 455
244 3300050508 nmdc:mga09592_1111_c1 nmdc:mga09592_1111_c1_8188_9573 455
245 3300050510 nmdc:mga06r32_862_c1 nmdc:mga06r32_862_c1_7985_9370 455
246 3300050511 nmdc:mga08y16_140025_c1 nmdc:mga08y16_140025_c1_591_1964 455
247 3300050511 nmdc:mga08y16_15861_c1 nmdc:mga08y16_15861_c1_370_1749 455
248 3300005295 Ga0065707_10081883 Ga0065707_1008188322 456
249 3300046460 Ga0495638_0003471 Ga0495638_0003471_1635_3005 456

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01554

MatE

MatE

102

262

0.99

PF01554

MatE

MatE

327

488

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6z70-assembly1.cif.gz_A structure of the mate family multidrug resistance transporter aq_128 from aquifex aeolicus in the outward-facing state 0.9457 9 447
6fv7-assembly1.cif.gz_A dimer structure of the mate family multidrug resistance transporter aq_128 from aquifex aeolicus in the outward-facing state 0.9366 13 442
6ids-assembly1.cif.gz_A crystal structure of vibrio cholerae mate transporter vcmn d35n mutant 0.9335 9 442
6idr-assembly1.cif.gz_A crystal structure of vibrio cholerae mate transporter vcmn in the bent form 0.9279 9 447
4mlb-assembly1.cif.gz_C reverse polarity of binding pocket suggests different function of a mop superfamily transporter from pyrococcus furiosus vc1 (dsm3638) 0.9258 1 441
ID Description Score Start End Superfamily
af_P71616_19_179_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9442 22 178 1.20.1250.20
af_Q2G140_24_185_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9416 23 178 1.20.1250.20
af_A0A1D6EJ30_351_510_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.938 247 403 1.20.1250.20
af_P71616_238_398_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9333 247 404 1.20.1250.20
af_A0A1D6FIC2_1_120_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9324 62 157 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A4Q7TWS0-F1-model_v4 deleted 0.9926 1 446
AF-A0A533IGW0-F1-model_v4 deleted 0.9916 67 406
AF-A0A809YPQ6-F1-model_v4 MATE family efflux transporter 0.9913 1 456 GO:0005886
GO:0015297
GO:0042910
AF-A0A6M4H8H5-F1-model_v4 Multidrug export protein MepA 0.9892 1 444 GO:0005886
GO:0015297
GO:0042910
AF-C1AAU2-F1-model_v4 MatE family protein 0.9875 1 443 GO:0005886
GO:0006811
GO:0015297
GO:0042910

Feature Viewer

pLDDT pTM Quality
86.95 0.87 High
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Predicted Structure (AlphaFold2)

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