F360587

General Info

Members Datasets Scaffolds Average Seq Length
249 171 233 261

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100016198|Ga0068855_1000161984
Length 281
Sequence MTSRDRLESCHRSSVSTVDLSLTDKVAVVTGASKGIGLAITRALVAEGVKVVAGSRSITEELVDLSETGQVLTVAVDLADSGAPADLVSHATHFGGLDILVNNVGAVTPRTQGFLEVSDDDWQATLNLTLMAAVRTTRAAIPLLIERGGGNVVTICSVNAFLPDPGVIDYSATKAAVWNLSKSLSKEFGSQGLRFNTVSPGPVSTALWLGKDGVAATVARSTGVSFDEARRRIIESGGGFSTGRFTEPEEVADLVLLLASQRAGNVTGADFLIDGGLTKDL

Samples

Sample ID Description Type Environment
1 2643221615 Nocardioides sp. Root224 Isolate Unclassified
2 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
3 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
4 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
5 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
6 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
7 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
8 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
9 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
10 2862574272 Streptomyces sp. AcE210 Isolate Nodule
11 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
12 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
13 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
14 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
15 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
16 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
17 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
68 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
69 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
70 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
78 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
79 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
80 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
81 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
82 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
83 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
84 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
85 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
86 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
89 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
90 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
91 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
92 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
93 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
94 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
95 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
96 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
97 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
98 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
99 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
100 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
101 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
102 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
103 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
104 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
105 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
118 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
119 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
120 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
143 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
144 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
145 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
152 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
153 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
154 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
155 3300053113 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 endosphere Metagenome Endosphere
156 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
157 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
158 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
159 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
160 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
161 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
162 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
163 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
164 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
165 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
166 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
167 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
170 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
171 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.77
Metatranscriptomes 0.8
Isolates 6.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.49
Nodule 0.4
Rhizoplane 12.45
Rhizosphere 55.02
Stem 0
Stem Tuber 0
Unclassified 9.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055533_1000002 3300003756 Bacteria 1196393
2 Ga0055525_1000094 3300003759 Bacteria 138254
3 Ga0055541_1000995 3300003841 Bacteria 6617
4 Ga0065714_10080286 3300005288 Bacteria 2451
5 Ga0070658_10020081 3300005327 Bacteria 5352
6 Ga0070658_10064399 3300005327 Bacteria 2990
7 Ga0070683_100103071 3300005329 Bacteria 2688
8 Ga0070670_100068810 3300005331 Bacteria 3039
9 Ga0070671_100067997 3300005355 Bacteria 2971
10 Ga0070711_100337417 3300005439 Bacteria 1208
11 Ga0070663_100304341 3300005455 Bacteria 1277
12 Ga0070679_100339629 3300005530 Bacteria 1450
13 Ga0070684_100053769 3300005535 Bacteria 3507
14 Ga0070672_100243244 3300005543 Bacteria 1514
15 Ga0068855_100016198 3300005563 Bacteria 8964
16 Ga0070664_100324732 3300005564 Bacteria 1395
17 Ga0068863_100764224 3300005841 Bacteria 963
18 Ga0068860_100559651 3300005843 Bacteria 1146
19 Ga0075365_10028091 3300006038 Bacteria 3586
20 Ga0075365_10060099 3300006038 Bacteria 2535
21 Ga0075365_10089350 3300006038 Bacteria 2097
22 Ga0075365_10133618 3300006038 Bacteria 1718
23 Ga0075365_10136800 3300006038 Bacteria 1698
24 Ga0075368_10100931 3300006042 Bacteria 1185
25 Ga0075364_10078836 3300006051 Bacteria 2176
26 Ga0075364_10146561 3300006051 Bacteria 1589
27 Ga0075364_10338323 3300006051 Bacteria 1025
28 Ga0075367_10010893 3300006178 Bacteria 4792
29 Ga0075367_10016148 3300006178 Bacteria 4074
30 Ga0075367_10056128 3300006178 Bacteria 2339
31 Ga0075369_10002965 3300006186 Bacteria 6131
32 Ga0075370_10037928 3300006353 Bacteria 2711
33 Ga0075370_10316328 3300006353 Bacteria 930
34 Ga0068871_100338009 3300006358 Bacteria 1329
35 Ga0075428_100016247 3300006844 Bacteria 8228
36 Ga0075428_100797457 3300006844 Bacteria 1004
37 Ga0075430_100006514 3300006846 Bacteria 9843
38 Ga0075431_100075296 3300006847 Bacteria 3483
39 Ga0075431_100101018 3300006847 Bacteria 2976
40 Ga0075429_100005979 3300006880 Bacteria 10517
41 Ga0075429_100585363 3300006880 Unclassified 978
42 Ga0075435_100257592 3300007076 Bacteria 1486
43 Ga0111539_10002203 3300009094 Bacteria 26016
44 Ga0105247_10031189 3300009101 Bacteria 3234
45 Ga0114129_10004023 3300009147 Bacteria 20741
46 Ga0105237_10075013 3300009545 Bacteria 3374
47 Ga0105239_10076600 3300010375 Bacteria 3679
48 Ga0157371_10137868 3300013102 Bacteria 1738
49 Ga0157370_10116706 3300013104 Bacteria 2493
50 Ga0157370_10227666 3300013104 Bacteria 1726
51 Ga0157369_10003371 3300013105 Bacteria 18981
52 Ga0157369_10063244 3300013105 Bacteria 3988
53 Ga0157369_10238180 3300013105 Bacteria 1901
54 Ga0157372_10136855 3300013307 Bacteria 2821
55 Ga0157372_10423707 3300013307 Bacteria 1551
56 Ga0157375_10056402 3300013308 Bacteria 3878
57 Ga0157375_10176271 3300013308 Bacteria 2287
58 Ga0163161_10293091 3300017792 Bacteria 1279
59 Ga0206354_11398694 3300020081 Bacteria 2020
60 Ga0206353_11935420 3300020082 Bacteria 5328
61 Ga0213876_10001137 3300021384 Bacteria 16939
62 Ga0209566_100094 3300025225 Bacteria 136227
63 Ga0209674_100001 3300025226 Bacteria 4013750
64 Ga0209563_100001 3300025230 Bacteria 4013775
65 Ga0209677_100001 3300025253 Bacteria 4013787
66 Ga0209677_101042 3300025253 Bacteria 13210
67 Ga0207705_10033079 3300025909 Bacteria 3695
68 Ga0207664_10539870 3300025929 Bacteria 1046
69 Ga0207644_10129705 3300025931 Bacteria 1929
70 Ga0207669_10015051 3300025937 Bacteria 3891
71 Ga0207676_10543221 3300026095 Bacteria 1109
72 Ga0207428_10001557 3300027907 Bacteria 23959
73 Ga0307517_10003542 3300028786 Bacteria 24249
74 Ga0307508_10135026 3300031616 Bacteria 2070
75 Ga0307514_10009064 3300031649 Bacteria 8404
76 Ga0307405_10044555 3300031731 Bacteria 2714
77 Ga0307416_100032320 3300032002 Bacteria 3952
78 Ga0307415_100034898 3300032126 Bacteria 3280
79 Ga0307415_100404953 3300032126 Bacteria 1166
80 Ga0395900_0478550 3300037418 Bacteria 1198
81 Ga0395898_0034490 3300037466 Bacteria 5043
82 Ga0395901_0443166 3300038443 Bacteria 1329
83 Ga0436365_0275182 3300039437 Bacteria 18321
84 Ga0451853_0827970 3300041512 Bacteria 3628
85 Ga0439450_002955 3300042008 Bacteria 2750
86 Ga0439464_0009157 3300042439 Bacteria 2603
87 Ga0466966_0160500 3300044684 Bacteria 1369
88 Ga0466961_0078642 3300044693 Bacteria 2089
89 Ga0466957_0113301 3300044842 Bacteria 1722
90 Ga0466967_0167910 3300045976 Bacteria 2063
91 Ga0495627_076308 3300046453 Bacteria 975
92 Ga0495603_0019501 3300046455 Bacteria 4104
93 Ga0495603_0051948 3300046455 Bacteria 2434
94 Ga0495590_0045450 3300046457 Bacteria 1532
95 Ga0495629_0321974 3300046459 Bacteria 1057
96 Ga0495638_0060514 3300046460 Bacteria 2342
97 Ga0495650_0000929 3300046471 Bacteria 34109
98 Ga0495582_0274851 3300046473 Bacteria 967
99 Ga0495585_0010187 3300046492 Bacteria 5612
100 Ga0495594_0018447 3300046499 Bacteria 3695
101 Ga0495607_0074625 3300046501 Bacteria 1882
102 Ga0495607_0153103 3300046501 Bacteria 1178
103 Ga0495631_0036668 3300046518 Bacteria 2189
104 Ga0495632_0045789 3300046519 Bacteria 2177
105 Ga0495643_0006923 3300046522 Bacteria 7377
106 Ga0495622_0097920 3300046557 Bacteria 1345
107 Ga0495613_0164699 3300046689 Bacteria 1576
108 Ga0495670_0015445 3300046691 Bacteria 3752
109 Ga0495670_0116613 3300046691 Bacteria 1385
110 Ga0495589_0001938 3300046794 Bacteria 11717
111 Ga0495589_0002803 3300046794 Bacteria 9638
112 Ga0495589_0088342 3300046794 Bacteria 1505
113 Ga0495676_0018015 3300047321 Bacteria 6229
114 Ga0495683_0029112 3300047323 Bacteria 2823
115 Ga0495685_001071 3300047447 Bacteria 8339
116 Ga0495685_001157 3300047447 Bacteria 8061
117 Ga0495685_010335 3300047447 Bacteria 3127
118 Ga0495681_0016584 3300047470 Bacteria 4120
119 Ga0495686_0221779 3300047472 Bacteria 1075
120 Ga0495686_0306262 3300047472 Unclassified 875
121 Ga0496102_0206052 3300048905 Bacteria 1854
122 Ga0496102_0325700 3300048905 Bacteria 1447
123 Ga0496104_0062746 3300048907 Bacteria 3524
124 Ga0496104_0098769 3300048907 Bacteria 2795
125 Ga0496104_0389465 3300048907 Bacteria 1306
126 Ga0496104_0492494 3300048907 Bacteria 1137
127 Ga0496104_0528315 3300048907 Bacteria 1091
128 Ga0496105_0107209 3300048908 Bacteria 2306
129 Ga0496105_0159023 3300048908 Bacteria 1855
130 Ga0496105_0266684 3300048908 Bacteria 1384
131 Ga0496105_0355488 3300048908 Bacteria 1169
132 Ga0496108_0447558 3300048911 Bacteria 1128
133 Ga0496109_0004446 3300048912 Bacteria 11708
134 Ga0496109_0130000 3300048912 Bacteria 2350
135 Ga0496109_0227179 3300048912 Bacteria 1756
136 Ga0496109_0233472 3300048912 Bacteria 1731
137 Ga0496109_0368683 3300048912 Bacteria 1356
138 Ga0496110_0006961 3300048913 Bacteria 8997
139 Ga0496110_0548236 3300048913 Bacteria 1051
140 Ga0496111_0190561 3300048914 Bacteria 1524
141 Ga0496112_0080242 3300048915 Bacteria 3226
142 Ga0496112_0171204 3300048915 Bacteria 2137
143 Ga0496112_0197817 3300048915 Bacteria 1970
144 Ga0496113_0119878 3300048916 Bacteria 2056
145 Ga0496113_0224639 3300048916 Bacteria 1497
146 Ga0496113_0333102 3300048916 Bacteria 1217
147 Ga0496114_0000292 3300048917 Bacteria 36655
148 Ga0496114_0005151 3300048917 Bacteria 10196
149 Ga0496114_0027005 3300048917 Bacteria 4702
150 Ga0496114_0303693 3300048917 Bacteria 1409
151 Ga0496115_0075947 3300048918 Bacteria 2731
152 Ga0496117_0000819 3300048920 Bacteria 48200
153 Ga0496118_0066371 3300048921 Bacteria 2634
154 Ga0496119_0000292 3300048922 Bacteria 70198
155 Ga0496120_0002063 3300048923 Bacteria 21678
156 Ga0496120_0076322 3300048923 Bacteria 1827
157 Ga0496120_0084177 3300048923 Bacteria 1715
158 Ga0496126_0000090 3300048929 Bacteria 210538
159 Ga0496126_0016459 3300048929 Bacteria 7393
160 Ga0496126_0055048 3300048929 Bacteria 3601
161 Ga0501032_0057981 3300049569 Bacteria 2600
162 Ga0501033_0003891 3300049570 Bacteria 12138
163 Ga0501033_0004594 3300049570 Bacteria 11063
164 Ga0501033_0014305 3300049570 Bacteria 6030
165 Ga0501034_0053345 3300049571 Bacteria 4071
166 Ga0501034_0055306 3300049571 Bacteria 3994
167 Ga0501034_0144329 3300049571 Bacteria 2358
168 Ga0501034_0259499 3300049571 Bacteria 1681
169 Ga0501036_0359611 3300049572 Bacteria 1215
170 Ga0501037_0164789 3300049573 Bacteria 1578
171 Ga0501037_0196890 3300049573 Bacteria 1425
172 Ga0501038_0026637 3300049574 Bacteria 5148
173 Ga0501038_0043268 3300049574 Bacteria 3916
174 Ga0501039_0013460 3300049575 Bacteria 6257
175 Ga0501043_0043212 3300049579 Bacteria 3542
176 Ga0501043_0088812 3300049579 Bacteria 2429
177 Ga0501046_0028886 3300049580 Bacteria 4512
178 Ga0501047_0195035 3300049581 Bacteria 1887
179 Ga0501048_0070948 3300049582 Bacteria 2459
180 Ga0501069_0128243 3300049585 Bacteria 1452
181 Ga0501070_0307933 3300049586 Bacteria 1290
182 Ga0501073_0008299 3300049589 Bacteria 7704
183 Ga0501074_0035000 3300049590 Bacteria 3639
184 Ga0501080_0128500 3300049742 Bacteria 2346
185 Ga0501035_0050085 3300049822 Bacteria 3743
186 Ga0501035_0055081 3300049822 Bacteria 3551
187 Ga0501035_0211381 3300049822 Bacteria 1659
188 Ga0501044_0023463 3300049823 Bacteria 6561
189 Ga0501044_0116565 3300049823 Bacteria 2676
190 Ga0501044_0189891 3300049823 Bacteria 2017
191 Ga0501044_0222568 3300049823 Bacteria 1837
192 Ga0501044_0268257 3300049823 Bacteria 1643
193 nmdc:mga00v17_142190_c1 3300050491 Bacteria 1539
194 nmdc:mga0yw44_188397_c1 3300050492 Bacteria 1360
195 nmdc:mga0yw44_26853_c1 3300050492 Bacteria 3293
196 nmdc:mga0yw44_80647_c1 3300050492 Bacteria 2039
197 nmdc:mga0yw44_9377_c1 3300050492 Bacteria 4944
198 nmdc:mga0k408_297437_c1 3300050493 Bacteria 963
199 nmdc:mga06z11_57646_c1 3300050494 Bacteria 2013
200 nmdc:mga04h51_107243_c1 3300050495 Bacteria 1025
201 nmdc:mga07m45_177974_c1 3300050496 Bacteria 1237
202 nmdc:mga07m45_47590_c2 3300050496 Bacteria 1859
203 nmdc:mga05p37_24293_c1 3300050507 Bacteria 7365
204 nmdc:mga09592_135483_c1 3300050508 Bacteria 2121
205 nmdc:mga09592_59317_c1 3300050508 Bacteria 3235
206 nmdc:mga0qj67_24307_c1 3300050509 Bacteria 4670
207 nmdc:mga06r32_16628_c1 3300050510 Bacteria 6705
208 nmdc:mga06r32_63389_c1 3300050510 Bacteria 3562
209 nmdc:mga08y16_19727_c1 3300050511 Bacteria 7109
210 nmdc:mga0sz30_3108_c1 3300050516 Bacteria 2073
211 Ga0500644_0000024 3300053088 Bacteria 97034
212 Ga0500566_0049042 3300053094 Bacteria 2419
213 Ga0500556_0000001 3300053104 Bacteria 1135060
214 Ga0500556_0000145 3300053104 Bacteria 59342
215 Ga0500580_065968 3300053113 Bacteria 1499
216 Ga0500593_011569 3300053117 Bacteria 3726
217 Ga0500652_009500 3300053131 Bacteria 3292
218 Ga0500655_011740 3300053133 Bacteria 1589
219 Ga0500658_0011550 3300053134 Bacteria 3255
220 Ga0500559_0000084 3300053136 Bacteria 74001
221 Ga0500559_0000235 3300053136 Bacteria 44025
222 Ga0500559_0062911 3300053136 Bacteria 1658
223 Ga0500561_0002413 3300053137 Bacteria 3144
224 Ga0500568_0000670 3300053139 Bacteria 24785
225 Ga0500573_0001639 3300053140 Bacteria 10837
226 Ga0500573_0069913 3300053140 Bacteria 2003
227 Ga0500573_0094809 3300053140 Bacteria 1683
228 Ga0500577_0006161 3300053142 Bacteria 3286
229 Ga0500579_060283 3300053143 Bacteria 2258
230 Ga0500600_0010833 3300053149 Bacteria 5528
231 Ga0500616_0000251 3300053153 Bacteria 83237
232 Ga0500616_0011196 3300053153 Bacteria 5319
233 Ga0501084_0294768 3300054114 Bacteria 1370

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300007076 Ga0075435_100257592 Ga0075435_1002575922 226
2 3300047472 Ga0495686_0221779 Ga0495686_0221779_248_1042 230
3 3300053104 Ga0500556_0000001 Ga0500556_0000001_962493_963287 230
4 3300048915 Ga0496112_0171204 Ga0496112_0171204_40_825 231
5 3300049574 Ga0501038_0026637 Ga0501038_0026637_36_731 231
6 3300010375 Ga0105239_10076600 Ga0105239_100766003 235
7 3300049571 Ga0501034_0259499 Ga0501034_0259499_158_925 238
8 3300049823 Ga0501044_0116565 Ga0501044_0116565_611_1405 238
9 3300048912 Ga0496109_0130000 Ga0496109_0130000_213_998 246
10 3300048929 Ga0496126_0000090 Ga0496126_0000090_18752_19537 247
11 3300048905 Ga0496102_0325700 Ga0496102_0325700_122_898 248
12 3300048921 Ga0496118_0066371 Ga0496118_0066371_1791_2567 248
13 3300048922 Ga0496119_0000292 Ga0496119_0000292_39587_40363 248
14 3300048923 Ga0496120_0076322 Ga0496120_0076322_657_1433 248
15 3300026095 Ga0207676_10543221 Ga0207676_105432212 249
16 3300048908 Ga0496105_0266684 Ga0496105_0266684_477_1271 249
17 3300048915 Ga0496112_0197817 Ga0496112_0197817_613_1398 249
18 3300048916 Ga0496113_0224639 Ga0496113_0224639_575_1360 249
19 3300013307 Ga0157372_10423707 Ga0157372_104237072 250
20 iso_pu_bacteria 8047710418 8047714603 252
21 3300025253 Ga0209677_101042 Ga0209677_1010423 253
22 3300053140 Ga0500573_0069913 Ga0500573_0069913_10_777 255
23 3300046471 Ga0495650_0000929 Ga0495650_0000929_4495_5289 256
24 iso_pu_bacteria 2643221615 2644089504 256
25 iso_pu_bacteria 2643221657 2644319349 256
26 iso_pu_bacteria 2728369276 2729907074 256
27 3300048929 Ga0496126_0016459 Ga0496126_0016459_5812_6588 257
28 iso_pu_bacteria 2738543005 2739204867 257
29 iso_pu_bacteria 2862574272 2862574538 257
30 iso_pu_bacteria 2928142448 2928146964 257
31 3300006042 Ga0075368_10100931 Ga0075368_101009312 259
32 3300006051 Ga0075364_10078836 Ga0075364_100788362 259
33 3300006051 Ga0075364_10338323 Ga0075364_103383232 259
34 3300006353 Ga0075370_10037928 Ga0075370_100379282 259
35 3300021384 Ga0213876_10001137 Ga0213876_1000113716 259
36 3300039437 Ga0436365_0275182 Ga0436365_0275182_4916_5698 259
37 3300050495 nmdc:mga04h51_107243_c1 nmdc:mga04h51_107243_c1_221_1003 259
38 3300050496 nmdc:mga07m45_47590_c2 nmdc:mga07m45_47590_c2_963_1745 259
39 3300005288 Ga0065714_10080286 Ga0065714_100802862 260
40 3300005329 Ga0070683_100103071 Ga0070683_1001030712 260
41 3300005530 Ga0070679_100339629 Ga0070679_1003396292 260
42 3300005535 Ga0070684_100053769 Ga0070684_1000537692 260
43 3300005843 Ga0068860_100559651 Ga0068860_1005596512 260
44 3300006038 Ga0075365_10060099 Ga0075365_100600992 260
45 3300006038 Ga0075365_10089350 Ga0075365_100893502 260
46 3300006038 Ga0075365_10133618 Ga0075365_101336182 260
47 3300006038 Ga0075365_10136800 Ga0075365_101368001 260
48 3300006051 Ga0075364_10146561 Ga0075364_101465612 260
49 3300006178 Ga0075367_10056128 Ga0075367_100561282 260
50 3300006353 Ga0075370_10316328 Ga0075370_103163281 260
51 3300006358 Ga0068871_100338009 Ga0068871_1003380092 260
52 3300009101 Ga0105247_10031189 Ga0105247_100311892 260
53 3300013105 Ga0157369_10238180 Ga0157369_102381802 260
54 3300013308 Ga0157375_10056402 Ga0157375_100564025 260
55 3300017792 Ga0163161_10293091 Ga0163161_102930912 260
56 3300037418 Ga0395900_0478550 Ga0395900_0478550_45_833 260
57 3300041512 Ga0451853_0827970 Ga0451853_0827970_343_1128 260
58 3300044693 Ga0466961_0078642 Ga0466961_0078642_553_1344 260
59 3300044842 Ga0466957_0113301 Ga0466957_0113301_328_1119 260
60 3300045976 Ga0466967_0167910 Ga0466967_0167910_157_948 260
61 3300046473 Ga0495582_0274851 Ga0495582_0274851_162_947 260
62 3300048905 Ga0496102_0206052 Ga0496102_0206052_103_912 260
63 3300048907 Ga0496104_0098769 Ga0496104_0098769_337_1122 260
64 3300048907 Ga0496104_0528315 Ga0496104_0528315_155_940 260
65 3300048912 Ga0496109_0004446 Ga0496109_0004446_10545_11330 260
66 3300048912 Ga0496109_0233472 Ga0496109_0233472_513_1298 260
67 3300048916 Ga0496113_0119878 Ga0496113_0119878_265_1050 260
68 3300048917 Ga0496114_0005151 Ga0496114_0005151_4173_4958 260
69 3300048918 Ga0496115_0075947 Ga0496115_0075947_1537_2322 260
70 3300050492 nmdc:mga0yw44_188397_c1 nmdc:mga0yw44_188397_c1_55_840 260
71 3300050492 nmdc:mga0yw44_26853_c1 nmdc:mga0yw44_26853_c1_922_1707 260
72 3300050492 nmdc:mga0yw44_80647_c1 nmdc:mga0yw44_80647_c1_508_1293 260
73 3300050494 nmdc:mga06z11_57646_c1 nmdc:mga06z11_57646_c1_827_1612 260
74 3300050496 nmdc:mga07m45_177974_c1 nmdc:mga07m45_177974_c1_355_1140 260
75 3300053088 Ga0500644_0000024 Ga0500644_0000024_59863_60648 260
76 iso_pu_bacteria 2643221694 2644526023 260
77 iso_pu_bacteria 2643221722 2644670081 260
78 iso_pu_bacteria 2721755702 2723644006 260
79 iso_pu_bacteria 2844841374 2844843522 260
80 iso_pu_bacteria 2935409751 2935412426 260
81 iso_pu_bacteria 2946059875 2946060557 260
82 iso_pu_bacteria 8016254467 8016254967 260
83 iso_pu_bacteria 8045830549 8045831121 260
84 3300025929 Ga0207664_10539870 Ga0207664_105398701 261
85 3300028786 Ga0307517_10003542 Ga0307517_1000354211 261
86 3300031616 Ga0307508_10135026 Ga0307508_101350263 261
87 3300032126 Ga0307415_100034898 Ga0307415_1000348983 261
88 3300046453 Ga0495627_076308 Ga0495627_076308_87_875 261
89 3300046455 Ga0495603_0019501 Ga0495603_0019501_1642_2430 261
90 3300046455 Ga0495603_0051948 Ga0495603_0051948_592_1380 261
91 3300046457 Ga0495590_0045450 Ga0495590_0045450_333_1121 261
92 3300046459 Ga0495629_0321974 Ga0495629_0321974_212_1000 261
93 3300046460 Ga0495638_0060514 Ga0495638_0060514_13_801 261
94 3300046492 Ga0495585_0010187 Ga0495585_0010187_309_1097 261
95 3300046499 Ga0495594_0018447 Ga0495594_0018447_1363_2151 261
96 3300046501 Ga0495607_0074625 Ga0495607_0074625_505_1293 261
97 3300046501 Ga0495607_0153103 Ga0495607_0153103_80_868 261
98 3300046518 Ga0495631_0036668 Ga0495631_0036668_234_1022 261
99 3300046519 Ga0495632_0045789 Ga0495632_0045789_108_896 261
100 3300046522 Ga0495643_0006923 Ga0495643_0006923_352_1140 261
101 3300046689 Ga0495613_0164699 Ga0495613_0164699_426_1214 261
102 3300046691 Ga0495670_0015445 Ga0495670_0015445_1270_2058 261
103 3300046691 Ga0495670_0116613 Ga0495670_0116613_221_1009 261
104 3300046794 Ga0495589_0001938 Ga0495589_0001938_6732_7520 261
105 3300046794 Ga0495589_0002803 Ga0495589_0002803_2758_3546 261
106 3300046794 Ga0495589_0088342 Ga0495589_0088342_591_1379 261
107 3300047321 Ga0495676_0018015 Ga0495676_0018015_4129_4917 261
108 3300047323 Ga0495683_0029112 Ga0495683_0029112_1195_1983 261
109 3300047447 Ga0495685_001071 Ga0495685_001071_5385_6173 261
110 3300047447 Ga0495685_001157 Ga0495685_001157_6203_6991 261
111 3300047447 Ga0495685_010335 Ga0495685_010335_1693_2481 261
112 3300047470 Ga0495681_0016584 Ga0495681_0016584_1310_2098 261
113 3300048907 Ga0496104_0062746 Ga0496104_0062746_191_979 261
114 3300048913 Ga0496110_0548236 Ga0496110_0548236_164_952 261
115 3300048917 Ga0496114_0000292 Ga0496114_0000292_10780_11568 261
116 3300048917 Ga0496114_0303693 Ga0496114_0303693_583_1371 261
117 3300053094 Ga0500566_0049042 Ga0500566_0049042_1081_1869 261
118 3300053113 Ga0500580_065968 Ga0500580_065968_655_1443 261
119 3300053131 Ga0500652_009500 Ga0500652_009500_816_1604 261
120 3300053134 Ga0500658_0011550 Ga0500658_0011550_1692_2480 261
121 3300053137 Ga0500561_0002413 Ga0500561_0002413_970_1758 261
122 3300053143 Ga0500579_060283 Ga0500579_060283_82_870 261
123 3300053149 Ga0500600_0010833 Ga0500600_0010833_352_1140 261
124 3300053153 Ga0500616_0000251 Ga0500616_0000251_79345_80133 261
125 3300053153 Ga0500616_0011196 Ga0500616_0011196_503_1291 261
126 3300046557 Ga0495622_0097920 Ga0495622_0097920_46_840 263
127 3300048923 Ga0496120_0002063 Ga0496120_0002063_9550_10341 263
128 3300003756 Ga0055533_1000002 Ga0055533_10000021123 264
129 3300003759 Ga0055525_1000094 Ga0055525_100009421 264
130 3300003841 Ga0055541_1000995 Ga0055541_10009954 264
131 3300005327 Ga0070658_10020081 Ga0070658_100200815 264
132 3300005327 Ga0070658_10064399 Ga0070658_100643992 264
133 3300005331 Ga0070670_100068810 Ga0070670_1000688102 264
134 3300005355 Ga0070671_100067997 Ga0070671_1000679974 264
135 3300005439 Ga0070711_100337417 Ga0070711_1003374171 264
136 3300005455 Ga0070663_100304341 Ga0070663_1003043412 264
137 3300005543 Ga0070672_100243244 Ga0070672_1002432441 264
138 3300005563 Ga0068855_100016198 Ga0068855_1000161984 264
139 3300005564 Ga0070664_100324732 Ga0070664_1003247322 264
140 3300005841 Ga0068863_100764224 Ga0068863_1007642241 264
141 3300006038 Ga0075365_10028091 Ga0075365_100280913 264
142 3300006178 Ga0075367_10010893 Ga0075367_100108933 264
143 3300006178 Ga0075367_10016148 Ga0075367_100161485 264
144 3300006186 Ga0075369_10002965 Ga0075369_100029659 264
145 3300006844 Ga0075428_100016247 Ga0075428_1000162478 264
146 3300006844 Ga0075428_100797457 Ga0075428_1007974572 264
147 3300006846 Ga0075430_100006514 Ga0075430_10000651410 264
148 3300006847 Ga0075431_100075296 Ga0075431_1000752964 264
149 3300006847 Ga0075431_100101018 Ga0075431_1001010181 264
150 3300006880 Ga0075429_100005979 Ga0075429_1000059795 264
151 3300006880 Ga0075429_100585363 Ga0075429_1005853631 264
152 3300009094 Ga0111539_10002203 Ga0111539_1000220313 264
153 3300009147 Ga0114129_10004023 Ga0114129_1000402312 264
154 3300009545 Ga0105237_10075013 Ga0105237_100750134 264
155 3300013102 Ga0157371_10137868 Ga0157371_101378682 264
156 3300013104 Ga0157370_10116706 Ga0157370_101167062 264
157 3300013104 Ga0157370_10227666 Ga0157370_102276662 264
158 3300013105 Ga0157369_10003371 Ga0157369_1000337111 264
159 3300013105 Ga0157369_10063244 Ga0157369_100632443 264
160 3300013307 Ga0157372_10136855 Ga0157372_101368552 264
161 3300013308 Ga0157375_10176271 Ga0157375_101762712 264
162 3300020081 Ga0206354_11398694 Ga0206354_113986943 264
163 3300020082 Ga0206353_11935420 Ga0206353_119354204 264
164 3300025225 Ga0209566_100094 Ga0209566_100094109 264
165 3300025226 Ga0209674_100001 Ga0209674_1000012446 264
166 3300025230 Ga0209563_100001 Ga0209563_1000012446 264
167 3300025253 Ga0209677_100001 Ga0209677_1000012446 264
168 3300025909 Ga0207705_10033079 Ga0207705_100330792 264
169 3300025931 Ga0207644_10129705 Ga0207644_101297053 264
170 3300025937 Ga0207669_10015051 Ga0207669_100150514 264
171 3300027907 Ga0207428_10001557 Ga0207428_100015574 264
172 3300031649 Ga0307514_10009064 Ga0307514_100090647 264
173 3300031731 Ga0307405_10044555 Ga0307405_100445553 264
174 3300032002 Ga0307416_100032320 Ga0307416_1000323203 264
175 3300032126 Ga0307415_100404953 Ga0307415_1004049531 264
176 3300037466 Ga0395898_0034490 Ga0395898_0034490_799_1593 264
177 3300038443 Ga0395901_0443166 Ga0395901_0443166_363_1157 264
178 3300042008 Ga0439450_002955 Ga0439450_002955_83_877 264
179 3300042439 Ga0439464_0009157 Ga0439464_0009157_965_1759 264
180 3300044684 Ga0466966_0160500 Ga0466966_0160500_81_875 264
181 3300047472 Ga0495686_0306262 Ga0495686_0306262_61_855 264
182 3300048907 Ga0496104_0389465 Ga0496104_0389465_28_822 264
183 3300048907 Ga0496104_0492494 Ga0496104_0492494_314_1108 264
184 3300048908 Ga0496105_0107209 Ga0496105_0107209_839_1633 264
185 3300048908 Ga0496105_0159023 Ga0496105_0159023_712_1506 264
186 3300048908 Ga0496105_0355488 Ga0496105_0355488_324_1118 264
187 3300048911 Ga0496108_0447558 Ga0496108_0447558_186_980 264
188 3300048912 Ga0496109_0227179 Ga0496109_0227179_80_874 264
189 3300048912 Ga0496109_0368683 Ga0496109_0368683_506_1300 264
190 3300048913 Ga0496110_0006961 Ga0496110_0006961_8049_8843 264
191 3300048914 Ga0496111_0190561 Ga0496111_0190561_59_853 264
192 3300048915 Ga0496112_0080242 Ga0496112_0080242_830_1624 264
193 3300048916 Ga0496113_0333102 Ga0496113_0333102_148_942 264
194 3300048917 Ga0496114_0027005 Ga0496114_0027005_3541_4335 264
195 3300048920 Ga0496117_0000819 Ga0496117_0000819_43492_44286 264
196 3300048923 Ga0496120_0084177 Ga0496120_0084177_213_1007 264
197 3300048929 Ga0496126_0055048 Ga0496126_0055048_1762_2556 264
198 3300049569 Ga0501032_0057981 Ga0501032_0057981_1484_2278 264
199 3300049570 Ga0501033_0003891 Ga0501033_0003891_3887_4693 264
200 3300049570 Ga0501033_0004594 Ga0501033_0004594_7807_8601 264
201 3300049570 Ga0501033_0014305 Ga0501033_0014305_1818_2612 264
202 3300049571 Ga0501034_0053345 Ga0501034_0053345_1324_2118 264
203 3300049571 Ga0501034_0055306 Ga0501034_0055306_2908_3702 264
204 3300049571 Ga0501034_0144329 Ga0501034_0144329_723_1517 264
205 3300049572 Ga0501036_0359611 Ga0501036_0359611_27_821 264
206 3300049573 Ga0501037_0164789 Ga0501037_0164789_154_948 264
207 3300049573 Ga0501037_0196890 Ga0501037_0196890_588_1382 264
208 3300049574 Ga0501038_0043268 Ga0501038_0043268_3057_3851 264
209 3300049575 Ga0501039_0013460 Ga0501039_0013460_2122_2916 264
210 3300049579 Ga0501043_0043212 Ga0501043_0043212_844_1638 264
211 3300049579 Ga0501043_0088812 Ga0501043_0088812_584_1378 264
212 3300049580 Ga0501046_0028886 Ga0501046_0028886_1823_2617 264
213 3300049581 Ga0501047_0195035 Ga0501047_0195035_250_1044 264
214 3300049582 Ga0501048_0070948 Ga0501048_0070948_1235_2029 264
215 3300049585 Ga0501069_0128243 Ga0501069_0128243_70_876 264
216 3300049586 Ga0501070_0307933 Ga0501070_0307933_384_1178 264
217 3300049589 Ga0501073_0008299 Ga0501073_0008299_2215_3009 264
218 3300049590 Ga0501074_0035000 Ga0501074_0035000_1461_2255 264
219 3300049742 Ga0501080_0128500 Ga0501080_0128500_1510_2304 264
220 3300049822 Ga0501035_0050085 Ga0501035_0050085_1166_1960 264
221 3300049822 Ga0501035_0055081 Ga0501035_0055081_739_1533 264
222 3300049822 Ga0501035_0211381 Ga0501035_0211381_824_1618 264
223 3300049823 Ga0501044_0023463 Ga0501044_0023463_2695_3501 264
224 3300049823 Ga0501044_0189891 Ga0501044_0189891_248_1042 264
225 3300049823 Ga0501044_0222568 Ga0501044_0222568_250_1044 264
226 3300049823 Ga0501044_0268257 Ga0501044_0268257_634_1428 264
227 3300050491 nmdc:mga00v17_142190_c1 nmdc:mga00v17_142190_c1_670_1464 264
228 3300050492 nmdc:mga0yw44_9377_c1 nmdc:mga0yw44_9377_c1_1009_1803 264
229 3300050493 nmdc:mga0k408_297437_c1 nmdc:mga0k408_297437_c1_140_934 264
230 3300050507 nmdc:mga05p37_24293_c1 nmdc:mga05p37_24293_c1_197_991 264
231 3300050508 nmdc:mga09592_135483_c1 nmdc:mga09592_135483_c1_60_854 264
232 3300050508 nmdc:mga09592_59317_c1 nmdc:mga09592_59317_c1_143_937 264
233 3300050509 nmdc:mga0qj67_24307_c1 nmdc:mga0qj67_24307_c1_130_924 264
234 3300050510 nmdc:mga06r32_16628_c1 nmdc:mga06r32_16628_c1_3715_4509 264
235 3300050510 nmdc:mga06r32_63389_c1 nmdc:mga06r32_63389_c1_2243_3037 264
236 3300050511 nmdc:mga08y16_19727_c1 nmdc:mga08y16_19727_c1_219_1013 264
237 3300050516 nmdc:mga0sz30_3108_c1 nmdc:mga0sz30_3108_c1_644_1438 264
238 3300053104 Ga0500556_0000145 Ga0500556_0000145_20414_21208 264
239 3300053117 Ga0500593_011569 Ga0500593_011569_1314_2108 264
240 3300053133 Ga0500655_011740 Ga0500655_011740_151_945 264
241 3300053136 Ga0500559_0000084 Ga0500559_0000084_66292_67086 264
242 3300053136 Ga0500559_0000235 Ga0500559_0000235_27158_27952 264
243 3300053136 Ga0500559_0062911 Ga0500559_0062911_19_813 264
244 3300053139 Ga0500568_0000670 Ga0500568_0000670_2077_2871 264
245 3300053140 Ga0500573_0001639 Ga0500573_0001639_9381_10175 264
246 3300053140 Ga0500573_0094809 Ga0500573_0094809_255_1049 264
247 3300053142 Ga0500577_0006161 Ga0500577_0006161_1708_2502 264
248 3300054114 Ga0501084_0294768 Ga0501084_0294768_25_819 264
249 iso_pu_bacteria 2643221690 2644503752 264

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

25

212

0.94

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

31

278

0.86

PF08659

KR

KR domain

26

204

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ztu-assembly1.cif.gz_B t190a mutant of d-3-hydroxybutyrate dehydrogenase complexed with nad+ 0.9424 12 258
4ni5-assembly1.cif.gz_A crystal structure of a short chain dehydrogenase from brucella suis 0.9339 1 258
2q2q-assembly1.cif.gz_D structure of d-3-hydroxybutyrate dehydrogenase from pseudomonas putida 0.9279 5 258
4ni5-assembly1.cif.gz_B crystal structure of a short chain dehydrogenase from brucella suis 0.9256 1 258
4i08-assembly1.cif.gz_A-2 crystal structure of beta-ketoacyl-acyl carrier protein reductase (fabg) from vibrio cholerae in complex with nadph 0.9254 6 260
ID Description Score Start End Superfamily
2ztuB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9424 12 258 3.40.50.720
af_A0A0P0Y501_3_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9362 5 190 3.40.50.720
4ni5A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9339 1 258 3.40.50.720
af_A0A1D6ED38_49_231_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9252 8 180 3.40.50.720
3grpC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9181 5 259 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A231GZ86-F1-model_v4 3-oxoacyl-[acyl-carrier-protein] reductase MabA 0.9792 1 158 GO:0004316
AF-A0A231GZ86-F1-model_v4 3-oxoacyl-[acyl-carrier-protein] reductase MabA 0.9671 1 158 GO:0004316
AF-A0A6J4NWB9-F1-model_v4 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.9545 1 231 GO:0004316
AF-A0A6G9GS16-F1-model_v4 SDR family oxidoreductase 0.9532 1 264 GO:0016616
AF-A0A2G7AF54-F1-model_v4 deleted 0.9532 1 264

Feature Viewer

pLDDT pTM Quality
88.43 0.89 High
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Predicted Structure (AlphaFold2)

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