F360485

General Info

Members Datasets Scaffolds Average Seq Length
249 173 247 729

Family's Representative Sequence

Representative Sequence 3300005339|Ga0070660_100039191|Ga0070660_1000391912
Length 760
Sequence MLLFTMPFQLESNYQPRGDQAQAIAKLAKSLEAGNQHQTLLGVTGSGKTFTIANVIREIDRPTLVISHNKTLAAQLYSEFKQFFPRNAVEYFVSYFDYYQPEAYIPRSDTYIEKDSSINEEIERLRLSATSALLSRRDVIVVASVSCIYGITSPEDYERMLLTVKRGQHTTREAILGRLVDMLYERNDMNFSRGRFRVRGDVVEVYPATADEEAVRIEFFGDEIDAITRFDPLTGHAREALSIITFFPAKQFVTPADKLNRALTTIRAELDDRIKVLESQNKLLEAQRLKMRTEYDLEMLQEMGFCSGIENYSRHLSGRPPGSKPYTIIDFFPKDFLTVVDESHATIPQIGGMYEGDKSRKTVLVDYGFRLPSALDNRPLNFPEFMKLTNQLVYVSATPAEFEIQNSIVGNAGYVPHKRARIGEDELVPFVLPGESVAAVNDRRTVGQARRLPSSGSAGGALALQLSRTDEPPEKFDVHTPGKPLVVEQIIRPTGLLDPRITIRGLKNQIDDTIELCRQRVEQQERVLVTTLTKRTAEDLADYLRDVGLKVRYLHSDIDTIERVEILRGLRAADFDILVGINLLREGLDLPEVSLVCILDADKEGFLRSQTSLIQTAGRAARHINGEVVLFADVVTDSMQALISISEYRRAKQMEYNEKHGITPQTVRRAVQESLHTILRGREIASSVINEAGGNFDLTELLRELEDEMQRASANLEFERAALLRDQIMEVKSGTGLSKIEPKRRPVKYTRNNGRRRSRV

Samples

Sample ID Description Type Environment
1 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
2 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
3 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
4 3300002126 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 Metagenome Rhizosphere
5 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
71 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
107 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
108 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
109 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
110 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
111 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
115 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
116 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
117 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
120 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
129 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
130 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
131 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
132 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
133 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
134 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
135 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
136 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
137 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
138 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
139 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
140 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
141 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
142 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
167 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
168 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
169 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
170 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
171 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
172 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
173 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.2
Metatranscriptomes 0
Isolates 0.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.02
Nodule 0
Rhizoplane 4.82
Rhizosphere 88.35
Stem 0
Stem Tuber 0
Unclassified 2.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNXas_1000123 3300000545 Bacteria 13860
2 JGI24035J26624_1000283 3300002126 Bacteria 4730
3 JGI24033J26618_1000329 3300002155 Bacteria 4945
4 JGI25406J46586_10000112 3300003203 Bacteria 35725
5 JGI25405J52794_10001288 3300003911 Bacteria 4079
6 Ga0065704_10080285 3300005289 Bacteria 3977
7 Ga0065715_10094904 3300005293 Bacteria 4215
8 Ga0070658_10009662 3300005327 Bacteria 7747
9 Ga0070676_10006435 3300005328 Bacteria 6277
10 Ga0070690_100014392 3300005330 Bacteria 4694
11 Ga0070670_100077923 3300005331 Bacteria 2847
12 Ga0070660_100039191 3300005339 Bacteria 3601
13 Ga0070689_100005768 3300005340 Bacteria 8491
14 Ga0070689_100069594 3300005340 Bacteria 2746
15 Ga0070661_100007686 3300005344 Bacteria 7445
16 Ga0070661_100045767 3300005344 Bacteria 3199
17 Ga0070669_100005516 3300005353 Bacteria 9132
18 Ga0070675_100005429 3300005354 Bacteria 9746
19 Ga0070675_100014319 3300005354 Bacteria 6253
20 Ga0070671_100017275 3300005355 Bacteria 5842
21 Ga0070674_100005870 3300005356 Bacteria 7139
22 Ga0070688_100005280 3300005365 Bacteria 6794
23 Ga0070659_100006631 3300005366 Bacteria 8365
24 Ga0070667_100035961 3300005367 Bacteria 4150
25 Ga0070667_100109254 3300005367 Bacteria 2396
26 Ga0070701_10020814 3300005438 Bacteria 3120
27 Ga0070705_100004039 3300005440 Bacteria 7168
28 Ga0070708_100048897 3300005445 Bacteria 3741
29 Ga0070708_100062085 3300005445 Bacteria 3340
30 Ga0070678_100005706 3300005456 Bacteria 7232
31 Ga0070681_10093101 3300005458 Bacteria 2962
32 Ga0070706_100000035 3300005467 Bacteria 152107
33 Ga0070706_100007726 3300005467 Bacteria 10055
34 Ga0070706_100022740 3300005467 Bacteria 5774
35 Ga0070706_100051676 3300005467 Bacteria 3793
36 Ga0070706_100062530 3300005467 Bacteria 3440
37 Ga0070707_100001740 3300005468 Bacteria 20969
38 Ga0070707_100077065 3300005468 Bacteria 3216
39 Ga0070698_100001369 3300005471 Bacteria 27100
40 Ga0070698_100001500 3300005471 Bacteria 25924
41 Ga0070698_100006092 3300005471 Bacteria 13132
42 Ga0070699_100008480 3300005518 Bacteria 8904
43 Ga0070699_100041764 3300005518 Bacteria 3969
44 Ga0070684_100007688 3300005535 Bacteria 8405
45 Ga0070684_100014959 3300005535 Bacteria 6299
46 Ga0070697_100000569 3300005536 Bacteria 27841
47 Ga0070697_100005432 3300005536 Bacteria 9821
48 Ga0070697_100007588 3300005536 Bacteria 8442
49 Ga0070697_100062352 3300005536 Bacteria 3043
50 Ga0068853_100000043 3300005539 Bacteria 102800
51 Ga0070672_100023078 3300005543 Bacteria 4582
52 Ga0070665_100013857 3300005548 Bacteria 8109
53 Ga0070704_100003782 3300005549 Bacteria 8713
54 Ga0068855_100002235 3300005563 Bacteria 23937
55 Ga0070664_100036580 3300005564 Bacteria 4125
56 Ga0070664_100089865 3300005564 Bacteria 2658
57 Ga0068859_100019956 3300005617 Bacteria 6728
58 Ga0068863_100010523 3300005841 Bacteria 8984
59 Ga0068858_100026164 3300005842 Bacteria 5425
60 Ga0068860_100000199 3300005843 Bacteria 95791
61 Ga0068860_100010619 3300005843 Bacteria 9093
62 Ga0081455_10000222 3300005937 Bacteria 73055
63 Ga0081455_10013063 3300005937 Bacteria 8231
64 Ga0081540_1006191 3300005983 Bacteria 8771
65 Ga0081539_10000052 3300005985 Bacteria 268240
66 Ga0081539_10002689 3300005985 Bacteria 24122
67 Ga0081539_10006064 3300005985 Bacteria 11821
68 Ga0070717_10006106 3300006028 Bacteria 8847
69 Ga0097621_100017121 3300006237 Bacteria 5498
70 Ga0075428_100002779 3300006844 Bacteria 19065
71 Ga0075436_100009271 3300006914 Bacteria 6733
72 Ga0097620_100019956 3300006931 Bacteria 6728
73 Ga0105240_10006943 3300009093 Bacteria 16541
74 Ga0111539_10089844 3300009094 Bacteria 3610
75 Ga0114129_10007608 3300009147 Bacteria 15419
76 Ga0105242_10016112 3300009176 Bacteria 5807
77 Ga0105238_10004756 3300009551 Bacteria 13433
78 Ga0157373_10004560 3300013100 Bacteria 10419
79 Ga0157370_10012736 3300013104 Bacteria 8702
80 Ga0157369_10099068 3300013105 Bacteria 3107
81 Ga0157374_10000028 3300013296 Bacteria 213725
82 Ga0157374_10006427 3300013296 Bacteria 9979
83 Ga0157374_10016200 3300013296 Bacteria 6549
84 Ga0157378_10021388 3300013297 Bacteria 5688
85 Ga0157378_10102470 3300013297 Bacteria 2614
86 Ga0157378_10102643 3300013297 Bacteria 2612
87 Ga0163162_10006911 3300013306 Bacteria 11003
88 Ga0157372_10013093 3300013307 Bacteria 8851
89 Ga0157375_10017115 3300013308 Bacteria 6534
90 Ga0157375_10018585 3300013308 Bacteria 6305
91 Ga0157377_10021345 3300014745 Bacteria 3405
92 Ga0157379_10003916 3300014968 Bacteria 12692
93 Ga0157376_10006069 3300014969 Bacteria 8495
94 Ga0157376_10020333 3300014969 Bacteria 5134
95 Ga0157376_10030924 3300014969 Bacteria 4281
96 Ga0213872_10017508 3300021361 Bacteria 3310
97 Ga0213876_10005869 3300021384 Bacteria 6720
98 Ga0207666_1000764 3300025271 Bacteria 3862
99 Ga0209050_1001377 3300025298 Bacteria 26519
100 Ga0207697_10000337 3300025315 Bacteria 26165
101 Ga0207697_10000365 3300025315 Bacteria 25299
102 Ga0207697_10001852 3300025315 Bacteria 11314
103 Ga0207697_10003637 3300025315 Bacteria 7561
104 Ga0207697_10007802 3300025315 Bacteria 4739
105 Ga0207642_10019299 3300025899 Bacteria 2638
106 Ga0207688_10015021 3300025901 Bacteria 4201
107 Ga0207645_10004352 3300025907 Bacteria 10487
108 Ga0207705_10015339 3300025909 Bacteria 5497
109 Ga0207684_10000043 3300025910 Bacteria 259939
110 Ga0207684_10003873 3300025910 Bacteria 14362
111 Ga0207684_10006807 3300025910 Bacteria 10364
112 Ga0207707_10084090 3300025912 Bacteria 2779
113 Ga0207695_10005646 3300025913 Bacteria 16511
114 Ga0207671_10005534 3300025914 Bacteria 11610
115 Ga0207693_10009030 3300025915 Bacteria 8136
116 Ga0207693_10017727 3300025915 Bacteria 5677
117 Ga0207663_10031801 3300025916 Bacteria 3127
118 Ga0207662_10000089 3300025918 Bacteria 43194
119 Ga0207649_10002395 3300025920 Bacteria 10520
120 Ga0207646_10009019 3300025922 Bacteria 9912
121 Ga0207646_10017941 3300025922 Bacteria 6609
122 Ga0207646_10047964 3300025922 Bacteria 3829
123 Ga0207646_10109661 3300025922 Bacteria 2476
124 Ga0207681_10032132 3300025923 Bacteria 3434
125 Ga0207659_10012640 3300025926 Bacteria 5381
126 Ga0207664_10026757 3300025929 Bacteria 4363
127 Ga0207644_10004664 3300025931 Bacteria 8907
128 Ga0207644_10063352 3300025931 Bacteria 2684
129 Ga0207706_10000188 3300025933 Bacteria 68890
130 Ga0207686_10005931 3300025934 Bacteria 6555
131 Ga0207670_10003467 3300025936 Bacteria 8365
132 Ga0207670_10008665 3300025936 Bacteria 5756
133 Ga0207670_10068121 3300025936 Bacteria 2451
134 Ga0207669_10007634 3300025937 Bacteria 5020
135 Ga0207665_10012982 3300025939 Bacteria 5477
136 Ga0207691_10000402 3300025940 Bacteria 43303
137 Ga0207691_10005768 3300025940 Bacteria 11980
138 Ga0207691_10046677 3300025940 Bacteria 3978
139 Ga0207667_10003901 3300025949 Bacteria 18340
140 Ga0207712_10012926 3300025961 Bacteria 5343
141 Ga0207703_10013543 3300026035 Bacteria 6353
142 Ga0207703_10057594 3300026035 Bacteria 3169
143 Ga0207639_10000002 3300026041 Bacteria 903066
144 Ga0207708_10003672 3300026075 Bacteria 11335
145 Ga0207641_10019676 3300026088 Bacteria 5542
146 Ga0207683_10004421 3300026121 Bacteria 12149
147 Ga0207683_10016472 3300026121 Bacteria 6291
148 Ga0207683_10020284 3300026121 Bacteria 5684
149 Ga0207683_10039274 3300026121 Bacteria 4129
150 Ga0268266_10023954 3300028379 Bacteria 5194
151 Ga0268264_10006562 3300028381 Bacteria 9795
152 Ga0265337_1003596 3300028556 Bacteria 6663
153 Ga0265338_10010172 3300028800 Bacteria 11088
154 Ga0265338_10021293 3300028800 Bacteria 6767
155 Ga0265338_10030393 3300028800 Bacteria 5323
156 Ga0265324_10000822 3300029957 Bacteria 20180
157 Ga0265320_10000363 3300031240 Bacteria 36831
158 Ga0265320_10019375 3300031240 Bacteria 3721
159 Ga0265320_10021168 3300031240 Bacteria 3504
160 Ga0265329_10003893 3300031242 Bacteria 6395
161 Ga0265339_10015906 3300031249 Bacteria 4497
162 Ga0265327_10001236 3300031251 Bacteria 34281
163 Ga0265327_10007800 3300031251 Bacteria 8155
164 Ga0265327_10009769 3300031251 Bacteria 6862
165 Ga0265314_10000147 3300031711 Bacteria 105307
166 Ga0316577_10023144 3300031733 Bacteria 3450
167 Ga0307409_100033937 3300031995 Bacteria 3720
168 Ga0307415_100041313 3300032126 Bacteria 3061
169 Ga0373955_0015870 3300035172 Bacteria 3696
170 Ga0373937_0040835 3300036401 Bacteria 4230
171 Ga0316582_0000011 3300036647 Bacteria 42742
172 Ga0316582_0027730 3300036647 Bacteria 3424
173 Ga0373925_0037163 3300037068 Bacteria 3594
174 Ga0395899_0003110 3300037312 Bacteria 13215
175 Ga0395899_0012096 3300037312 Bacteria 6610
176 Ga0395900_0010120 3300037418 Bacteria 9646
177 Ga0395900_0024462 3300037418 Bacteria 6185
178 Ga0395898_0000026 3300037466 Bacteria 374440
179 Ga0395898_0029377 3300037466 Bacteria 5507
180 Ga0395905_0015762 3300037471 Bacteria 7180
181 Ga0316581_0000644 3300037588 Bacteria 6993
182 Ga0395901_0001326 3300038443 Bacteria 26051
183 Ga0436365_1003296 3300039437 Bacteria 2728
184 Ga0436365_1112867 3300039437 Bacteria 50005
185 Ga0436360_0127883 3300039438 Bacteria 4031
186 Ga0436360_0705195 3300039438 Bacteria 3800
187 Ga0436360_1160050 3300039438 Bacteria 3077
188 Ga0436361_0155125 3300039447 Bacteria 10559
189 Ga0436361_0405526 3300039447 Bacteria 11056
190 Ga0436361_0418443 3300039447 Bacteria 4636
191 Ga0436361_0653751 3300039447 Bacteria 5068
192 Ga0436361_0919430 3300039447 Bacteria 4285
193 Ga0436363_0386426 3300039450 Bacteria 19811
194 Ga0436363_0803061 3300039450 Bacteria 15961
195 Ga0436362_0489247 3300039453 Bacteria 2641
196 Ga0436362_0618957 3300039453 Bacteria 3439
197 Ga0451577_0001851 3300042876 Bacteria 26948
198 Ga0466965_0005907 3300044683 Bacteria 5527
199 Ga0453684_0021003 3300044712 Bacteria 9790
200 Ga0466971_0000024 3300044719 Bacteria 66749
201 Ga0451576_0048183 3300045051 Bacteria 4478
202 Ga0451576_0058058 3300045051 Bacteria 4044
203 Ga0495618_0042336 3300046514 Bacteria 2870
204 Ga0495628_0039632 3300046516 Bacteria 3767
205 Ga0495630_0007103 3300046517 Bacteria 7978
206 Ga0495643_0000057 3300046522 Bacteria 195145
207 Ga0495652_0013583 3300046529 Bacteria 7329
208 Ga0495586_0009785 3300046535 Bacteria 5104
209 Ga0495599_0005310 3300046678 Bacteria 7685
210 Ga0495599_0016344 3300046678 Bacteria 4607
211 Ga0496101_0008508 3300048904 Bacteria 6707
212 Ga0496102_0019768 3300048905 Bacteria 5936
213 Ga0496106_0009255 3300048909 Bacteria 7279
214 Ga0496107_0002913 3300048910 Bacteria 11313
215 Ga0496110_0007596 3300048913 Bacteria 8664
216 Ga0496111_0074121 3300048914 Bacteria 2479
217 Ga0496112_0009211 3300048915 Bacteria 8874
218 Ga0496112_0054641 3300048915 Bacteria 3924
219 Ga0496115_0002837 3300048918 Bacteria 12468
220 Ga0496115_0007492 3300048918 Bacteria 8034
221 Ga0496115_0008229 3300048918 Bacteria 7706
222 Ga0496125_0000110 3300048928 Bacteria 192693
223 Ga0501031_0000126 3300049568 Bacteria 42484
224 Ga0501032_0000152 3300049569 Bacteria 55627
225 Ga0501032_0054708 3300049569 Bacteria 2686
226 Ga0501033_0000007 3300049570 Bacteria 303981
227 Ga0501033_0000021 3300049570 Bacteria 192208
228 Ga0501037_0000051 3300049573 Bacteria 111193
229 Ga0501039_0001129 3300049575 Bacteria 19644
230 Ga0501043_0033318 3300049579 Bacteria 4053
231 Ga0501047_0020984 3300049581 Bacteria 6275
232 Ga0501070_0004455 3300049586 Bacteria 12031
233 Ga0501080_0042801 3300049742 Bacteria 4216
234 Ga0501035_0000002 3300049822 Bacteria 585447
235 Ga0501044_0014889 3300049823 Bacteria 8385
236 nmdc:mga00v17_24454_c1 3300050491 Bacteria 3505
237 nmdc:mga05p37_4487_c1 3300050507 Bacteria 16319
238 nmdc:mga08x19_19673_c1 3300050514 Bacteria 4146
239 Ga0500566_0000970 3300053094 Bacteria 16532
240 Ga0500555_000004 3300053103 Bacteria 343705
241 Ga0500555_000858 3300053103 Bacteria 10848
242 Ga0500556_0000453 3300053104 Bacteria 29167
243 Ga0500556_0002270 3300053104 Bacteria 6356
244 Ga0500642_0002936 3300053130 Bacteria 5075
245 Ga0500616_0004281 3300053153 Bacteria 10250
246 Ga0500645_005940 3300053730 Bacteria 4423
247 Ga0466962_0000031 3300061719 Bacteria 68489

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046514 Ga0495618_0042336 Ga0495618_0042336_28_1704 549
2 3300050491 nmdc:mga00v17_24454_c1 nmdc:mga00v17_24454_c1_569_2605 654
3 3300005458 Ga0070681_10093101 Ga0070681_100931013 656
4 3300025912 Ga0207707_10084090 Ga0207707_100840901 656
5 3300053094 Ga0500566_0000970 Ga0500566_0000970_1987_4008 656
6 3300032126 Ga0307415_100041313 Ga0307415_1000413132 657
7 3300031995 Ga0307409_100033937 Ga0307409_1000339372 658
8 3300031733 Ga0316577_10023144 Ga0316577_100231442 668
9 3300036647 Ga0316582_0000011 Ga0316582_0000011_28448_30472 668
10 3300036647 Ga0316582_0027730 Ga0316582_0027730_1088_3112 668
11 3300037588 Ga0316581_0000644 Ga0316581_0000644_1450_3474 668
12 3300028556 Ga0265337_1003596 Ga0265337_10035962 669
13 3300031242 Ga0265329_10003893 Ga0265329_100038932 669
14 3300031711 Ga0265314_10000147 Ga0265314_1000014711 669
15 3300005438 Ga0070701_10020814 Ga0070701_100208142 670
16 3300006844 Ga0075428_100002779 Ga0075428_10000277919 670
17 3300009094 Ga0111539_10089844 Ga0111539_100898442 670
18 3300025936 Ga0207670_10068121 Ga0207670_100681211 670
19 3300031251 Ga0265327_10007800 Ga0265327_100078003 670
20 3300031251 Ga0265327_10009769 Ga0265327_100097696 670
21 3300049569 Ga0501032_0054708 Ga0501032_0054708_448_2601 671
22 3300049823 Ga0501044_0014889 Ga0501044_0014889_4135_6288 671
23 3300028800 Ga0265338_10030393 Ga0265338_100303933 672
24 3300031240 Ga0265320_10019375 Ga0265320_100193752 672
25 3300031240 Ga0265320_10021168 Ga0265320_100211682 672
26 3300009551 Ga0105238_10004756 Ga0105238_100047567 673
27 3300031240 Ga0265320_10000363 Ga0265320_1000036314 673
28 3300037068 Ga0373925_0037163 Ga0373925_0037163_1320_3446 674
29 3300053103 Ga0500555_000004 Ga0500555_000004_241740_243782 674
30 3300028800 Ga0265338_10021293 Ga0265338_100212937 677
31 3300031249 Ga0265339_10015906 Ga0265339_100159063 677
32 3300044712 Ga0453684_0021003 Ga0453684_0021003_4063_6156 678
33 3300036401 Ga0373937_0040835 Ga0373937_0040835_1556_3688 680
34 iso_pu_bacteria 2786546517 2787438213 681
35 3300029957 Ga0265324_10000822 Ga0265324_100008226 686
36 3300046678 Ga0495599_0005310 Ga0495599_0005310_4774_6906 686
37 3300049579 Ga0501043_0033318 Ga0501043_0033318_624_2777 687
38 3300021384 Ga0213876_10005869 Ga0213876_100058692 688
39 3300039437 Ga0436365_1112867 Ga0436365_1112867_9321_11507 688
40 3300028800 Ga0265338_10010172 Ga0265338_100101728 694
41 3300048928 Ga0496125_0000110 Ga0496125_0000110_86302_88467 696
42 3300021361 Ga0213872_10017508 Ga0213872_100175083 700
43 3300039447 Ga0436361_0919430 Ga0436361_0919430_450_2627 700
44 3300005340 Ga0070689_100069594 Ga0070689_1000695941 704
45 3300042876 Ga0451577_0001851 Ga0451577_0001851_8305_10518 704
46 3300005344 Ga0070661_100007686 Ga0070661_1000076864 705
47 3300025920 Ga0207649_10002395 Ga0207649_100023952 705
48 3300049568 Ga0501031_0000126 Ga0501031_0000126_14895_17090 709
49 3300049573 Ga0501037_0000051 Ga0501037_0000051_100051_102210 709
50 3300049575 Ga0501039_0001129 Ga0501039_0001129_3676_5871 709
51 3300049581 Ga0501047_0020984 Ga0501047_0020984_3278_5473 709
52 3300049586 Ga0501070_0004455 Ga0501070_0004455_8271_10466 709
53 3300049822 Ga0501035_0000002 Ga0501035_0000002_404154_406349 709
54 3300044683 Ga0466965_0005907 Ga0466965_0005907_921_3107 710
55 3300044719 Ga0466971_0000024 Ga0466971_0000024_14763_16913 710
56 3300061719 Ga0466962_0000031 Ga0466962_0000031_547_2697 710
57 3300045051 Ga0451576_0058058 Ga0451576_0058058_171_2339 711
58 3300053104 Ga0500556_0002270 Ga0500556_0002270_3943_6108 713
59 3300002155 JGI24033J26618_1000329 JGI24033J26618_10003292 714
60 3300005456 Ga0070678_100005706 Ga0070678_1000057064 714
61 3300005983 Ga0081540_1006191 Ga0081540_10061913 714
62 3300013296 Ga0157374_10016200 Ga0157374_100162003 714
63 3300013308 Ga0157375_10018585 Ga0157375_100185853 714
64 3300026121 Ga0207683_10016472 Ga0207683_100164722 714
65 3300049569 Ga0501032_0000152 Ga0501032_0000152_42864_45038 714
66 3300049570 Ga0501033_0000007 Ga0501033_0000007_120321_122495 714
67 3300049570 Ga0501033_0000021 Ga0501033_0000021_5789_7963 714
68 3300053730 Ga0500645_005940 Ga0500645_005940_2004_4175 714
69 3300049742 Ga0501080_0042801 Ga0501080_0042801_599_2806 715
70 3300005467 Ga0070706_100007726 Ga0070706_1000077262 716
71 3300025910 Ga0207684_10003873 Ga0207684_100038736 716
72 iso_pu_bacteria 2786546548 2787508993 716
73 3300005289 Ga0065704_10080285 Ga0065704_100802853 717
74 3300005327 Ga0070658_10009662 Ga0070658_100096624 717
75 3300013104 Ga0157370_10012736 Ga0157370_100127368 717
76 3300025909 Ga0207705_10015339 Ga0207705_100153393 717
77 3300025914 Ga0207671_10005534 Ga0207671_100055349 717
78 3300037466 Ga0395898_0000026 Ga0395898_0000026_11469_13655 717
79 3300039438 Ga0436360_0705195 Ga0436360_0705195_1410_3572 717
80 3300053103 Ga0500555_000858 Ga0500555_000858_7157_9322 717
81 3300053104 Ga0500556_0000453 Ga0500556_0000453_7698_9863 717
82 3300053130 Ga0500642_0002936 Ga0500642_0002936_464_2629 717
83 3300013100 Ga0157373_10004560 Ga0157373_100045608 718
84 3300037312 Ga0395899_0003110 Ga0395899_0003110_10925_13114 718
85 3300039447 Ga0436361_0405526 Ga0436361_0405526_4202_6367 718
86 3300005467 Ga0070706_100062530 Ga0070706_1000625302 719
87 3300005471 Ga0070698_100001369 Ga0070698_10000136916 719
88 3300005518 Ga0070699_100008480 Ga0070699_1000084806 719
89 3300005536 Ga0070697_100005432 Ga0070697_1000054328 719
90 3300005536 Ga0070697_100007588 Ga0070697_1000075888 719
91 3300025939 Ga0207665_10012982 Ga0207665_100129822 719
92 3300039438 Ga0436360_0127883 Ga0436360_0127883_1118_3292 719
93 3300039438 Ga0436360_1160050 Ga0436360_1160050_185_2362 719
94 3300039447 Ga0436361_0155125 Ga0436361_0155125_920_3100 719
95 3300039447 Ga0436361_0418443 Ga0436361_0418443_2012_4186 719
96 3300039450 Ga0436363_0386426 Ga0436363_0386426_14952_17129 719
97 3300039453 Ga0436362_0489247 Ga0436362_0489247_238_2412 719
98 3300039453 Ga0436362_0618957 Ga0436362_0618957_1079_3256 719
99 3300006914 Ga0075436_100009271 Ga0075436_1000092712 720
100 3300039447 Ga0436361_0653751 Ga0436361_0653751_1416_3593 720
101 3300039450 Ga0436363_0803061 Ga0436363_0803061_9517_11715 720
102 3300050514 nmdc:mga08x19_19673_c1 nmdc:mga08x19_19673_c1_660_2864 720
103 3300005843 Ga0068860_100000199 Ga0068860_10000019917 721
104 3300028381 Ga0268264_10006562 Ga0268264_100065622 721
105 3300005445 Ga0070708_100062085 Ga0070708_1000620853 722
106 3300005563 Ga0068855_100002235 Ga0068855_1000022356 722
107 3300005985 Ga0081539_10006064 Ga0081539_100060646 722
108 3300013296 Ga0157374_10000028 Ga0157374_1000002855 722
109 3300014969 Ga0157376_10006069 Ga0157376_100060692 722
110 3300025910 Ga0207684_10006807 Ga0207684_100068076 722
111 3300025949 Ga0207667_10003901 Ga0207667_1000390113 722
112 3300026035 Ga0207703_10013543 Ga0207703_100135432 722
113 3300005536 Ga0070697_100062352 Ga0070697_1000623522 724
114 3300003203 JGI25406J46586_10000112 JGI25406J46586_1000011218 725
115 3300005985 Ga0081539_10000052 Ga0081539_10000052175 725
116 3300013296 Ga0157374_10006427 Ga0157374_100064278 725
117 3300025315 Ga0207697_10007802 Ga0207697_100078023 725
118 3300037312 Ga0395899_0012096 Ga0395899_0012096_3769_6018 725
119 3300037418 Ga0395900_0010120 Ga0395900_0010120_3050_5299 725
120 3300037466 Ga0395898_0029377 Ga0395898_0029377_3026_5275 725
121 3300037471 Ga0395905_0015762 Ga0395905_0015762_3624_5873 725
122 3300038443 Ga0395901_0001326 Ga0395901_0001326_21004_23253 725
123 3300006237 Ga0097621_100017121 Ga0097621_1000171212 726
124 3300048915 Ga0496112_0009211 Ga0496112_0009211_2921_5110 726
125 3300048918 Ga0496115_0008229 Ga0496115_0008229_2249_4438 726
126 3300009093 Ga0105240_10006943 Ga0105240_1000694314 727
127 3300013297 Ga0157378_10102643 Ga0157378_101026431 727
128 3300025298 Ga0209050_1001377 Ga0209050_100137713 727
129 3300025913 Ga0207695_10005646 Ga0207695_100056464 727
130 3300053153 Ga0500616_0004281 Ga0500616_0004281_4693_6906 727
131 3300013307 Ga0157372_10013093 Ga0157372_100130932 728
132 3300005468 Ga0070707_100001740 Ga0070707_10000174012 729
133 3300005539 Ga0068853_100000043 Ga0068853_10000004347 729
134 3300005985 Ga0081539_10002689 Ga0081539_1000268913 729
135 3300025922 Ga0207646_10017941 Ga0207646_100179412 729
136 3300025922 Ga0207646_10109661 Ga0207646_101096612 729
137 3300002126 JGI24035J26624_1000283 JGI24035J26624_10002832 730
138 3300005340 Ga0070689_100005768 Ga0070689_1000057683 730
139 3300005354 Ga0070675_100005429 Ga0070675_1000054296 730
140 3300005365 Ga0070688_100005280 Ga0070688_1000052804 730
141 3300005366 Ga0070659_100006631 Ga0070659_1000066315 730
142 3300005535 Ga0070684_100007688 Ga0070684_1000076886 730
143 3300005549 Ga0070704_100003782 Ga0070704_1000037826 730
144 3300005564 Ga0070664_100089865 Ga0070664_1000898652 730
145 3300005617 Ga0068859_100019956 Ga0068859_1000199562 730
146 3300005841 Ga0068863_100010523 Ga0068863_1000105232 730
147 3300005842 Ga0068858_100026164 Ga0068858_1000261641 730
148 3300005843 Ga0068860_100010619 Ga0068860_1000106196 730
149 3300006931 Ga0097620_100019956 Ga0097620_1000199564 730
150 3300014745 Ga0157377_10021345 Ga0157377_100213452 730
151 3300014968 Ga0157379_10003916 Ga0157379_100039167 730
152 3300025315 Ga0207697_10000337 Ga0207697_1000033711 730
153 3300025926 Ga0207659_10012640 Ga0207659_100126402 730
154 3300025936 Ga0207670_10003467 Ga0207670_100034675 730
155 3300025961 Ga0207712_10012926 Ga0207712_100129262 730
156 3300026035 Ga0207703_10057594 Ga0207703_100575942 730
157 3300026075 Ga0207708_10003672 Ga0207708_100036723 730
158 3300026088 Ga0207641_10019676 Ga0207641_100196763 730
159 3300048909 Ga0496106_0009255 Ga0496106_0009255_1185_3398 730
160 3300048913 Ga0496110_0007596 Ga0496110_0007596_5898_8111 730
161 3300005471 Ga0070698_100001500 Ga0070698_1000015005 732
162 3300025922 Ga0207646_10047964 Ga0207646_100479642 732
163 3300031251 Ga0265327_10001236 Ga0265327_1000123622 732
164 3300005367 Ga0070667_100109254 Ga0070667_1001092541 733
165 3300009176 Ga0105242_10016112 Ga0105242_100161123 733
166 3300025934 Ga0207686_10005931 Ga0207686_100059312 733
167 3300046522 Ga0495643_0000057 Ga0495643_0000057_106116_108386 733
168 3300048915 Ga0496112_0054641 Ga0496112_0054641_1004_3286 733
169 3300003911 JGI25405J52794_10001288 JGI25405J52794_100012882 734
170 3300005331 Ga0070670_100077923 Ga0070670_1000779231 734
171 3300005355 Ga0070671_100017275 Ga0070671_1000172754 734
172 3300005367 Ga0070667_100035961 Ga0070667_1000359613 734
173 3300005445 Ga0070708_100048897 Ga0070708_1000488972 734
174 3300005467 Ga0070706_100022740 Ga0070706_1000227403 734
175 3300005471 Ga0070698_100006092 Ga0070698_1000060924 734
176 3300005543 Ga0070672_100023078 Ga0070672_1000230783 734
177 3300005548 Ga0070665_100013857 Ga0070665_1000138572 734
178 3300005564 Ga0070664_100036580 Ga0070664_1000365802 734
179 3300005937 Ga0081455_10000222 Ga0081455_1000022249 734
180 3300009147 Ga0114129_10007608 Ga0114129_100076083 734
181 3300013306 Ga0163162_10006911 Ga0163162_100069116 734
182 3300013308 Ga0157375_10017115 Ga0157375_100171152 734
183 3300014969 Ga0157376_10020333 Ga0157376_100203332 734
184 3300025315 Ga0207697_10000365 Ga0207697_100003655 734
185 3300025315 Ga0207697_10003637 Ga0207697_100036373 734
186 3300025915 Ga0207693_10017727 Ga0207693_100177274 734
187 3300025931 Ga0207644_10004664 Ga0207644_100046645 734
188 3300025940 Ga0207691_10000402 Ga0207691_1000040210 734
189 3300025940 Ga0207691_10046677 Ga0207691_100466772 734
190 3300026121 Ga0207683_10039274 Ga0207683_100392742 734
191 3300028379 Ga0268266_10023954 Ga0268266_100239543 734
192 3300050507 nmdc:mga05p37_4487_c1 nmdc:mga05p37_4487_c1_7310_9517 734
193 3300025922 Ga0207646_10009019 Ga0207646_100090197 735
194 3300039437 Ga0436365_1003296 Ga0436365_1003296_13_2277 735
195 3300005330 Ga0070690_100014392 Ga0070690_1000143922 736
196 3300005344 Ga0070661_100045767 Ga0070661_1000457672 736
197 3300005467 Ga0070706_100000035 Ga0070706_10000003569 736
198 3300005468 Ga0070707_100077065 Ga0070707_1000770652 736
199 3300005535 Ga0070684_100014959 Ga0070684_1000149593 736
200 3300005536 Ga0070697_100000569 Ga0070697_10000056918 736
201 3300013105 Ga0157369_10099068 Ga0157369_100990682 736
202 3300014969 Ga0157376_10030924 Ga0157376_100309243 736
203 3300025271 Ga0207666_1000764 Ga0207666_10007641 736
204 3300025910 Ga0207684_10000043 Ga0207684_1000004355 736
205 3300025936 Ga0207670_10008665 Ga0207670_100086654 736
206 3300035172 Ga0373955_0015870 Ga0373955_0015870_257_2494 736
207 3300046516 Ga0495628_0039632 Ga0495628_0039632_839_3076 736
208 3300046529 Ga0495652_0013583 Ga0495652_0013583_3290_5527 736
209 3300046678 Ga0495599_0016344 Ga0495599_0016344_839_3076 736
210 3300026041 Ga0207639_10000002 Ga0207639_10000002330 737
211 3300046517 Ga0495630_0007103 Ga0495630_0007103_2719_4971 738
212 3300046535 Ga0495586_0009785 Ga0495586_0009785_2054_4306 738
213 3300005328 Ga0070676_10006435 Ga0070676_100064353 739
214 3300005518 Ga0070699_100041764 Ga0070699_1000417644 739
215 3300005937 Ga0081455_10013063 Ga0081455_100130634 739
216 3300006028 Ga0070717_10006106 Ga0070717_100061066 739
217 3300013297 Ga0157378_10021388 Ga0157378_100213883 739
218 3300013297 Ga0157378_10102470 Ga0157378_101024701 739
219 3300025918 Ga0207662_10000089 Ga0207662_1000008925 739
220 3300025923 Ga0207681_10032132 Ga0207681_100321322 739
221 3300025929 Ga0207664_10026757 Ga0207664_100267573 739
222 3300025933 Ga0207706_10000188 Ga0207706_1000018822 739
223 3300045051 Ga0451576_0048183 Ga0451576_0048183_1918_4161 739
224 3300048918 Ga0496115_0002837 Ga0496115_0002837_7391_9649 739
225 3300005293 Ga0065715_10094904 Ga0065715_100949041 740
226 3300005339 Ga0070660_100039191 Ga0070660_1000391912 740
227 3300005353 Ga0070669_100005516 Ga0070669_1000055165 740
228 3300005354 Ga0070675_100014319 Ga0070675_1000143194 740
229 3300005356 Ga0070674_100005870 Ga0070674_1000058705 740
230 3300005440 Ga0070705_100004039 Ga0070705_1000040394 740
231 3300005467 Ga0070706_100051676 Ga0070706_1000516762 740
232 3300025315 Ga0207697_10001852 Ga0207697_100018521 740
233 3300025899 Ga0207642_10019299 Ga0207642_100192991 740
234 3300025901 Ga0207688_10015021 Ga0207688_100150213 740
235 3300025907 Ga0207645_10004352 Ga0207645_100043524 740
236 3300025915 Ga0207693_10009030 Ga0207693_100090304 740
237 3300025916 Ga0207663_10031801 Ga0207663_100318012 740
238 3300025931 Ga0207644_10063352 Ga0207644_100633521 740
239 3300025937 Ga0207669_10007634 Ga0207669_100076341 740
240 3300025940 Ga0207691_10005768 Ga0207691_100057685 740
241 3300026121 Ga0207683_10004421 Ga0207683_100044211 740
242 3300026121 Ga0207683_10020284 Ga0207683_100202843 740
243 3300037418 Ga0395900_0024462 Ga0395900_0024462_2437_4683 740
244 3300048904 Ga0496101_0008508 Ga0496101_0008508_149_2416 740
245 3300048905 Ga0496102_0019768 Ga0496102_0019768_3178_5445 740
246 3300048910 Ga0496107_0002913 Ga0496107_0002913_5230_7497 740
247 3300048914 Ga0496111_0074121 Ga0496111_0074121_10_2277 740
248 3300048918 Ga0496115_0007492 Ga0496115_0007492_894_3161 740
249 3300000545 CNXas_1000123 CNXas_10001238 742

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17757

UvrB_inter

UvrB interaction domain

162

252

0.99

PF12344

UvrB

Ultra-violet resistance protein B

630

672

0.97

PF02151

UVR

UvrB/uvrC motif

699

734

0.94

PF00271

Helicase_C

Helicase conserved C-terminal domain

508

624

0.9

PF04851

ResIII

Type III restriction enzyme, res subunit

13

142

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fpn-assembly3.cif.gz_B crystal structure of uvra-uvrb interaction domains 0.9761 156 248
7egt-assembly2.cif.gz_C the crystal structure of the c-terminal domain of t. thermophilus uvrd complexed with the n-terminal domain of uvrb 0.9734 2 398
6o8g-assembly2.cif.gz_B crystal structure of uvrb bound to fully duplex dna 0.9596 1 651
6o8g-assembly1.cif.gz_A crystal structure of uvrb bound to fully duplex dna 0.9579 1 642
6o8g-assembly2.cif.gz_B crystal structure of uvrb bound to fully duplex dna 0.9579 1 651
ID Description Score Start End Superfamily
2fdcB03 Special;Helix non-globular;Helix Hairpins; 1.004 249 311 6.10.140.240
1t5lB03 Special;Helix non-globular;Helix Hairpins; 1.001 249 311 6.10.140.240
1t5lA03 Special;Helix non-globular;Helix Hairpins; 1 249 311 6.10.140.240
1c4oA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9773 2 145 3.40.50.300
2fdcB03 Special;Helix non-globular;Helix Hairpins; 0.9729 249 311 6.10.140.240
ID Description Score Start End GO Terms
AF-A0A351FQL2-F1-model_v4 Excinuclease ABC subunit B 0.9784 247 399 GO:0003677
GO:0005524
GO:0006289
GO:0009380
GO:0016887
AF-X1QNI8-F1-model_v4 UvrB interaction domain-containing protein 0.9726 104 348 GO:0003677
GO:0005524
GO:0006289
GO:0009380
GO:0016887
AF-A0A351FQL2-F1-model_v4 Excinuclease ABC subunit B 0.9721 247 399 GO:0003677
GO:0005524
GO:0006289
GO:0009380
GO:0016887
AF-A0A2V6D1T3-F1-model_v4 Excinuclease ABC subunit B 0.9699 1 273 GO:0003677
GO:0005524
GO:0006289
GO:0009380
GO:0016887
AF-X1QNI8-F1-model_v4 UvrB interaction domain-containing protein 0.9687 104 348 GO:0003677
GO:0005524
GO:0006289
GO:0009380
GO:0016887

Feature Viewer

pLDDT pTM Quality
81.34 0.76 High
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Predicted Structure (AlphaFold2)

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