F359076

General Info

Members Datasets Scaffolds Average Seq Length
247 153 494 434

Family's Representative Sequence

Representative Sequence 3300025942|Ga0207689_10008699|Ga0207689_100086996
Length 465
Sequence MSISAEDVEAPMRAPGALERTRTVTWEDPLVTAQAVAGLSGIDFLRAIMEGRLPPGGLLPPVRTLAEALSLSAATVAAAYRTLRVRGLVAGEGRRGTRVVLRPPLRLRRPPVVTPGARDLAEGNPDPAWLPDLRAALRRSAGPSGLYGGPTFLPALRTLAARQLEQDHIPAATLAVVGGAMDGVERVLQAHLRPGDRVAVEDPGYAGVLDLVGAMGLVPQPMSLDDFGVTPEALESALAAGARAVILTPRAQNPTGAAFDEERARALRAALDRHPDVLLVEDDHAGPVAGTAALTLAHARKPRWAVVRSVSKSLGPDLRLALLAGDATTVARVEGRQSLGAGWVSHVLQAAVASLWANPATDRRLRDAAQSYTRRRRALVDTLARHGLPAHGRSGFNVWIPVREEAATIAGMSAAGWAIRAGEPYRIQSPPAVRITISSLTLEDVPRVAAALAGTQDARGRTPAA

Samples

Sample ID Description Type Environment
1 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
51 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
68 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
69 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
85 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
86 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
87 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
88 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
89 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
90 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
91 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
92 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
93 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
96 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
97 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
102 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
103 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
104 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
105 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
121 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
124 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
129 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
135 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
136 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
150 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
151 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
152 2867369537 Streptomyces sp. Z26 Isolate Unclassified
153 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.38
Metatranscriptomes 0
Isolates 1.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.24
Nodule 0
Rhizoplane 0.4
Rhizosphere 95.14
Stem 0
Stem Tuber 0
Unclassified 1.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207689_10008699 3300025942 Bacteria 8834
2 JGI25407J50210_10012408 3300003373 Bacteria 2185
3 Ga0070682_100005025 3300005337 Bacteria 7351
4 Ga0068868_100045237 3300005338 Bacteria 3444
5 Ga0070675_100011839 3300005354 Bacteria 6834
6 Ga0070671_100186836 3300005355 Bacteria 1756
7 Ga0070667_100058673 3300005367 Bacteria 3254
8 Ga0070709_10010100 3300005434 Bacteria 5218
9 Ga0070709_10172415 3300005434 Bacteria 1513
10 Ga0070714_100007952 3300005435 Bacteria 8261
11 Ga0070714_100065747 3300005435 Bacteria 3124
12 Ga0070710_10019902 3300005437 Bacteria 3476
13 Ga0070710_10020694 3300005437 Bacteria 3417
14 Ga0070705_100117112 3300005440 Bacteria 1713
15 Ga0068867_100019473 3300005459 Bacteria 4835
16 Ga0070706_100009937 3300005467 Bacteria 8835
17 Ga0070706_100115064 3300005467 Bacteria 2504
18 Ga0070706_100222802 3300005467 Bacteria 1760
19 Ga0070707_100008208 3300005468 Bacteria 9686
20 Ga0070707_100039561 3300005468 Bacteria 4507
21 Ga0070698_100011404 3300005471 Bacteria 9430
22 Ga0070699_100002000 3300005518 Bacteria 18404
23 Ga0070697_100080415 3300005536 Bacteria 2685
24 Ga0070696_100040883 3300005546 Bacteria 3202
25 Ga0070704_100028202 3300005549 Bacteria 3732
26 Ga0070702_100051832 3300005615 Bacteria 2351
27 Ga0068859_100006529 3300005617 Bacteria 11844
28 Ga0068861_100038900 3300005719 Bacteria 3547
29 Ga0068863_100050752 3300005841 Bacteria 3931
30 Ga0068858_100010196 3300005842 Bacteria 8918
31 Ga0081455_10072818 3300005937 Bacteria 2843
32 Ga0081538_10000424 3300005981 Bacteria 47554
33 Ga0081538_10003914 3300005981 Bacteria 13891
34 Ga0081538_10006205 3300005981 Bacteria 10583
35 Ga0081538_10007719 3300005981 Bacteria 9268
36 Ga0081538_10016144 3300005981 Bacteria 5740
37 Ga0081538_10016213 3300005981 Bacteria 5727
38 Ga0081538_10019401 3300005981 Bacteria 5055
39 Ga0081538_10023160 3300005981 Bacteria 4473
40 Ga0081538_10041683 3300005981 Bacteria 2909
41 Ga0081540_1001467 3300005983 Bacteria 20365
42 Ga0081539_10000854 3300005985 Bacteria 58277
43 Ga0081539_10044302 3300005985 Bacteria 2570
44 Ga0081539_10049890 3300005985 Bacteria 2371
45 Ga0070717_10174907 3300006028 Bacteria 1869
46 Ga0075365_10057197 3300006038 Bacteria 2594
47 Ga0075364_10149336 3300006051 Unclassified 1574
48 Ga0070712_100138824 3300006175 Bacteria 1852
49 Ga0075362_10036218 3300006177 Bacteria 2157
50 Ga0075366_10018693 3300006195 Bacteria 4003
51 Ga0097621_100060815 3300006237 Bacteria 3097
52 Ga0075428_100024352 3300006844 Bacteria 6698
53 Ga0075428_100064888 3300006844 Bacteria 3999
54 Ga0075428_100266584 3300006844 Bacteria 1843
55 Ga0075430_100031649 3300006846 Bacteria 4489
56 Ga0075430_100031828 3300006846 Bacteria 4477
57 Ga0075431_100002559 3300006847 Bacteria 17551
58 Ga0075431_100113386 3300006847 Bacteria 2798
59 Ga0075433_10035401 3300006852 Bacteria 4293
60 Ga0075433_10281942 3300006852 Bacteria 1472
61 Ga0075434_100035393 3300006871 Bacteria 4936
62 Ga0075434_100050198 3300006871 Bacteria 4144
63 Ga0075434_100239163 3300006871 Bacteria 1836
64 Ga0075434_100303454 3300006871 Unclassified 1617
65 Ga0075429_100053297 3300006880 Bacteria 3520
66 Ga0097620_100006529 3300006931 Bacteria 11844
67 Ga0075435_100106345 3300007076 Bacteria 2330
68 Ga0075435_100110426 3300007076 Bacteria 2287
69 Ga0111539_10002917 3300009094 Bacteria 22687
70 Ga0105245_10097532 3300009098 Bacteria 2714
71 Ga0105243_10016671 3300009148 Bacteria 5554
72 Ga0105249_10050768 3300009553 Bacteria 3781
73 Ga0157377_10052448 3300014745 Bacteria 2302
74 Ga0157379_10076212 3300014968 Bacteria 3003
75 Ga0213876_10005080 3300021384 Bacteria 7253
76 Ga0207653_10003345 3300025885 Bacteria 5062
77 Ga0207692_10032672 3300025898 Bacteria 2503
78 Ga0207699_10094569 3300025906 Bacteria 1883
79 Ga0207699_10156483 3300025906 Bacteria 1513
80 Ga0207643_10027394 3300025908 Bacteria 3160
81 Ga0207684_10045954 3300025910 Bacteria 3704
82 Ga0207684_10110080 3300025910 Bacteria 2357
83 Ga0207684_10169301 3300025910 Bacteria 1883
84 Ga0207662_10018598 3300025918 Bacteria 3946
85 Ga0207646_10023566 3300025922 Bacteria 5652
86 Ga0207646_10028055 3300025922 Bacteria 5129
87 Ga0207646_10163562 3300025922 Bacteria 2009
88 Ga0207659_10140928 3300025926 Bacteria 1871
89 Ga0207664_10013015 3300025929 Bacteria 5962
90 Ga0207664_10048064 3300025929 Bacteria 3354
91 Ga0207706_10025581 3300025933 Bacteria 5287
92 Ga0207665_10000321 3300025939 Bacteria 33299
93 Ga0207665_10063807 3300025939 Bacteria 2502
94 Ga0207712_10029054 3300025961 Bacteria 3706
95 Ga0207658_10026137 3300025986 Bacteria 4091
96 Ga0207677_10075457 3300026023 Bacteria 2396
97 Ga0207675_100002230 3300026118 Bacteria 19264
98 Ga0207675_100014725 3300026118 Bacteria 7294
99 Ga0207428_10000300 3300027907 Bacteria 65308
100 Ga0207428_10002717 3300027907 Bacteria 17630
101 Ga0307408_100043717 3300031548 Bacteria 3189
102 Ga0307405_10003768 3300031731 Bacteria 7043
103 Ga0307405_10009844 3300031731 Bacteria 4919
104 Ga0307413_10024269 3300031824 Bacteria 3303
105 Ga0307413_10042530 3300031824 Bacteria 2671
106 Ga0307413_10065572 3300031824 Bacteria 2262
107 Ga0307410_10021010 3300031852 Bacteria 4007
108 Ga0307410_10075284 3300031852 Bacteria 2353
109 Ga0307406_10005775 3300031901 Bacteria 6780
110 Ga0307406_10018065 3300031901 Bacteria 4114
111 Ga0307406_10038143 3300031901 Bacteria 2972
112 Ga0307406_10074060 3300031901 Bacteria 2241
113 Ga0307407_10039576 3300031903 Bacteria 2623
114 Ga0307407_10154618 3300031903 Bacteria 1494
115 Ga0307412_10038098 3300031911 Bacteria 3093
116 Ga0307409_100007549 3300031995 Bacteria 6516
117 Ga0307409_100025039 3300031995 Bacteria 4176
118 Ga0307416_100016794 3300032002 Bacteria 5100
119 Ga0307416_100023379 3300032002 Bacteria 4484
120 Ga0307416_100075105 3300032002 Bacteria 2827
121 Ga0307416_100085760 3300032002 Bacteria 2681
122 Ga0307416_100097874 3300032002 Bacteria 2542
123 Ga0307416_100100742 3300032002 Bacteria 2513
124 Ga0307414_10043824 3300032004 Bacteria 3051
125 Ga0307411_10041706 3300032005 Bacteria 2923
126 Ga0307411_10078330 3300032005 Bacteria 2266
127 Ga0307415_100005813 3300032126 Bacteria 6592
128 Ga0307415_100006347 3300032126 Bacteria 6365
129 Ga0307415_100012769 3300032126 Bacteria 4871
130 Ga0307415_100017828 3300032126 Bacteria 4267
131 Ga0307415_100077420 3300032126 Bacteria 2361
132 Ga0395900_0096893 3300037418 Bacteria 3031
133 Ga0395898_0121535 3300037466 Bacteria 2502
134 Ga0395898_0154988 3300037466 Bacteria 2191
135 Ga0395905_0022087 3300037471 Bacteria 6019
136 Ga0395901_0129880 3300038443 Bacteria 2647
137 Ga0395901_0152754 3300038443 Bacteria 2425
138 Ga0436365_1318723 3300039437 Bacteria 13502
139 Ga0436362_0069823 3300039453 Bacteria 2688
140 Ga0439448_0000247 3300042005 Bacteria 11629
141 Ga0439448_0027098 3300042005 Bacteria 1805
142 Ga0439448_0051202 3300042005 Bacteria 1352
143 Ga0439450_003753 3300042008 Bacteria 2541
144 Ga0439454_001940 3300042011 Bacteria 2087
145 Ga0439455_0006174 3300042012 Bacteria 2474
146 Ga0439463_001036 3300042016 Bacteria 7531
147 Ga0439435_0005482 3300042436 Bacteria 2794
148 Ga0439444_0004049 3300042437 Bacteria 2105
149 Ga0439460_0000382 3300042461 Bacteria 9391
150 Ga0450916_000545 3300042530 Bacteria 3326
151 Ga0466966_0031322 3300044684 Bacteria 3450
152 Ga0466961_0045703 3300044693 Unclassified 2801
153 Ga0466963_0015637 3300044694 Unclassified 4705
154 Ga0466963_0027584 3300044694 Bacteria 3638
155 Ga0466963_0107998 3300044694 Bacteria 1909
156 Ga0466960_0105180 3300044901 Bacteria 1459
157 Ga0466959_0018485 3300045049 Bacteria 5118
158 Ga0466958_0007042 3300045836 Bacteria 6153
159 Ga0466967_0030981 3300045976 Bacteria 4496
160 Ga0466967_0065630 3300045976 Bacteria 3231
161 Ga0466967_0070961 3300045976 Bacteria 3117
162 Ga0466967_0148169 3300045976 Bacteria 2191
163 Ga0495603_0064499 3300046455 Bacteria 2159
164 Ga0495644_0026333 3300046523 Bacteria 2207
165 Ga0495609_0029521 3300046538 Bacteria 2497
166 Ga0495672_0000974 3300047320 Bacteria 29691
167 Ga0495602_0033179 3300048088 Bacteria 4847
168 Ga0496115_0000017 3300048918 Bacteria 185702
169 Ga0501031_0001417 3300049568 Bacteria 14844
170 Ga0501031_0051350 3300049568 Bacteria 2685
171 Ga0501032_0114007 3300049569 Bacteria 1788
172 Ga0501033_0021867 3300049570 Bacteria 4827
173 Ga0501033_0065540 3300049570 Bacteria 2672
174 Ga0501036_0000200 3300049572 Bacteria 39733
175 Ga0501036_0000448 3300049572 Bacteria 29405
176 Ga0501037_0051200 3300049573 Bacteria 3020
177 Ga0501037_0108888 3300049573 Bacteria 1996
178 Ga0501038_0002593 3300049574 Bacteria 16877
179 Ga0501038_0033401 3300049574 Bacteria 4533
180 Ga0501039_0000480 3300049575 Bacteria 28866
181 Ga0501039_0000679 3300049575 Bacteria 24489
182 Ga0501040_0000032 3300049576 Bacteria 63810
183 Ga0501040_0000079 3300049576 Bacteria 46963
184 Ga0501041_0000331 3300049577 Bacteria 23071
185 Ga0501041_0000507 3300049577 Bacteria 20068
186 Ga0501042_0000061 3300049578 Bacteria 38552
187 Ga0501042_0003971 3300049578 Bacteria 9364
188 Ga0501042_0084064 3300049578 Bacteria 2282
189 Ga0501046_0003533 3300049580 Bacteria 14311
190 Ga0501046_0005222 3300049580 Bacteria 11615
191 Ga0501047_0058569 3300049581 Bacteria 3721
192 Ga0501048_0000777 3300049582 Bacteria 23365
193 Ga0501048_0001066 3300049582 Bacteria 20548
194 Ga0501067_0000435 3300049583 Bacteria 22847
195 Ga0501069_0007415 3300049585 Bacteria 5757
196 Ga0501069_0033636 3300049585 Bacteria 2824
197 Ga0501070_0038050 3300049586 Bacteria 4015
198 Ga0501071_0010719 3300049587 Bacteria 6147
199 Ga0501072_0000281 3300049588 Bacteria 36756
200 Ga0501072_0010583 3300049588 Bacteria 7025
201 Ga0501072_0030417 3300049588 Bacteria 4223
202 Ga0501074_0002867 3300049590 Bacteria 12078
203 Ga0501075_0001325 3300049591 Bacteria 16072
204 Ga0501075_0005568 3300049591 Bacteria 8613
205 Ga0501076_0000018 3300049592 Bacteria 92605
206 Ga0501076_0000103 3300049592 Bacteria 46377
207 Ga0501076_0148432 3300049592 Bacteria 1907
208 Ga0501077_0000405 3300049593 Bacteria 26004
209 Ga0501077_0000483 3300049593 Bacteria 24181
210 Ga0501079_0000405 3300049741 Bacteria 27884
211 Ga0501079_0002967 3300049741 Bacteria 12406
212 Ga0501080_0063223 3300049742 Bacteria 3445
213 Ga0501081_0002999 3300049743 Bacteria 10714
214 Ga0501081_0025172 3300049743 Bacteria 4001
215 Ga0501035_0022343 3300049822 Bacteria 5809
216 Ga0501045_0001014 3300049824 Bacteria 18469
217 Ga0501045_0004547 3300049824 Bacteria 9585
218 nmdc:mga03683_16207_c1 3300050489 Bacteria 2794
219 nmdc:mga00v17_5101_c1 3300050491 Bacteria 6901
220 nmdc:mga0k408_516_c1 3300050493 Bacteria 21224
221 nmdc:mga05p37_20720_c1 3300050507 Bacteria 7956
222 nmdc:mga05p37_22745_c1 3300050507 Bacteria 7604
223 nmdc:mga05p37_413620_c1 3300050507 Bacteria 1571
224 nmdc:mga09592_38290_c1 3300050508 Bacteria 4025
225 nmdc:mga0qj67_12559_c1 3300050509 Bacteria 6385
226 nmdc:mga0qj67_25435_c1 3300050509 Bacteria 4574
227 nmdc:mga06r32_111919_c1 3300050510 Bacteria 2687
228 nmdc:mga06r32_294832_c1 3300050510 Bacteria 1608
229 nmdc:mga08y16_251_c1 3300050511 Bacteria 48220
230 nmdc:mga0n895_147301_c1 3300050512 Bacteria 2384
231 nmdc:mga0n895_25050_c1 3300050512 Bacteria 5632
232 nmdc:mga0rr50_39337_c1 3300050513 Bacteria 3429
233 nmdc:mga0rr50_61174_c1 3300050513 Bacteria 2836
234 nmdc:mga0a205_278041_c1 3300050515 Bacteria 1550
235 nmdc:mga0a205_31128_c1 3300050515 Bacteria 5110
236 Ga0500573_0093084 3300053140 Bacteria 1701
237 Ga0501084_0004117 3300054114 Bacteria 11848
238 Ga0501084_0045969 3300054114 Bacteria 3655
239 Ga0590075_001790 3300059424 Bacteria 5258
240 Ga0501082_0000096 3300060353 Bacteria 67949
241 Ga0501082_0001155 3300060353 Bacteria 23280
242 Ga0530510_0000310 3300061734 Bacteria 31195
243 Ga0530510_0002708 3300061734 Bacteria 12186
244 2676486076 2675903059 Bacteria 8644972
245 2837269161 2837268691 Bacteria 7850704
246 2867375241 2867369537 Bacteria 6501581
247 2873157825 2873151551 Bacteria 8625867
248 Ga0207689_10008699
249 JGI25407J50210_10012408
250 Ga0070682_100005025
251 Ga0068868_100045237
252 Ga0070675_100011839
253 Ga0070671_100186836
254 Ga0070667_100058673
255 Ga0070709_10010100
256 Ga0070709_10172415
257 Ga0070714_100007952
258 Ga0070714_100065747
259 Ga0070710_10019902
260 Ga0070710_10020694
261 Ga0070705_100117112
262 Ga0068867_100019473
263 Ga0070706_100009937
264 Ga0070706_100115064
265 Ga0070706_100222802
266 Ga0070707_100008208
267 Ga0070707_100039561
268 Ga0070698_100011404
269 Ga0070699_100002000
270 Ga0070697_100080415
271 Ga0070696_100040883
272 Ga0070704_100028202
273 Ga0070702_100051832
274 Ga0068859_100006529
275 Ga0068861_100038900
276 Ga0068863_100050752
277 Ga0068858_100010196
278 Ga0081455_10072818
279 Ga0081538_10000424
280 Ga0081538_10003914
281 Ga0081538_10006205
282 Ga0081538_10007719
283 Ga0081538_10016144
284 Ga0081538_10016213
285 Ga0081538_10019401
286 Ga0081538_10023160
287 Ga0081538_10041683
288 Ga0081540_1001467
289 Ga0081539_10000854
290 Ga0081539_10044302
291 Ga0081539_10049890
292 Ga0070717_10174907
293 Ga0075365_10057197
294 Ga0075364_10149336
295 Ga0070712_100138824
296 Ga0075362_10036218
297 Ga0075366_10018693
298 Ga0097621_100060815
299 Ga0075428_100024352
300 Ga0075428_100064888
301 Ga0075428_100266584
302 Ga0075430_100031649
303 Ga0075430_100031828
304 Ga0075431_100002559
305 Ga0075431_100113386
306 Ga0075433_10035401
307 Ga0075433_10281942
308 Ga0075434_100035393
309 Ga0075434_100050198
310 Ga0075434_100239163
311 Ga0075434_100303454
312 Ga0075429_100053297
313 Ga0097620_100006529
314 Ga0075435_100106345
315 Ga0075435_100110426
316 Ga0111539_10002917
317 Ga0105245_10097532
318 Ga0105243_10016671
319 Ga0105249_10050768
320 Ga0157377_10052448
321 Ga0157379_10076212
322 Ga0213876_10005080
323 Ga0207653_10003345
324 Ga0207692_10032672
325 Ga0207699_10094569
326 Ga0207699_10156483
327 Ga0207643_10027394
328 Ga0207684_10045954
329 Ga0207684_10110080
330 Ga0207684_10169301
331 Ga0207662_10018598
332 Ga0207646_10023566
333 Ga0207646_10028055
334 Ga0207646_10163562
335 Ga0207659_10140928
336 Ga0207664_10013015
337 Ga0207664_10048064
338 Ga0207706_10025581
339 Ga0207665_10000321
340 Ga0207665_10063807
341 Ga0207712_10029054
342 Ga0207658_10026137
343 Ga0207677_10075457
344 Ga0207675_100002230
345 Ga0207675_100014725
346 Ga0207428_10000300
347 Ga0207428_10002717
348 Ga0307408_100043717
349 Ga0307405_10003768
350 Ga0307405_10009844
351 Ga0307413_10024269
352 Ga0307413_10042530
353 Ga0307413_10065572
354 Ga0307410_10021010
355 Ga0307410_10075284
356 Ga0307406_10005775
357 Ga0307406_10018065
358 Ga0307406_10038143
359 Ga0307406_10074060
360 Ga0307407_10039576
361 Ga0307407_10154618
362 Ga0307412_10038098
363 Ga0307409_100007549
364 Ga0307409_100025039
365 Ga0307416_100016794
366 Ga0307416_100023379
367 Ga0307416_100075105
368 Ga0307416_100085760
369 Ga0307416_100097874
370 Ga0307416_100100742
371 Ga0307414_10043824
372 Ga0307411_10041706
373 Ga0307411_10078330
374 Ga0307415_100005813
375 Ga0307415_100006347
376 Ga0307415_100012769
377 Ga0307415_100017828
378 Ga0307415_100077420
379 Ga0395900_0096893
380 Ga0395898_0121535
381 Ga0395898_0154988
382 Ga0395905_0022087
383 Ga0395901_0129880
384 Ga0395901_0152754
385 Ga0436365_1318723
386 Ga0436362_0069823
387 Ga0439448_0000247
388 Ga0439448_0027098
389 Ga0439448_0051202
390 Ga0439450_003753
391 Ga0439454_001940
392 Ga0439455_0006174
393 Ga0439463_001036
394 Ga0439435_0005482
395 Ga0439444_0004049
396 Ga0439460_0000382
397 Ga0450916_000545
398 Ga0466966_0031322
399 Ga0466961_0045703
400 Ga0466963_0015637
401 Ga0466963_0027584
402 Ga0466963_0107998
403 Ga0466960_0105180
404 Ga0466959_0018485
405 Ga0466958_0007042
406 Ga0466967_0030981
407 Ga0466967_0065630
408 Ga0466967_0070961
409 Ga0466967_0148169
410 Ga0495603_0064499
411 Ga0495644_0026333
412 Ga0495609_0029521
413 Ga0495672_0000974
414 Ga0495602_0033179
415 Ga0496115_0000017
416 Ga0501031_0001417
417 Ga0501031_0051350
418 Ga0501032_0114007
419 Ga0501033_0021867
420 Ga0501033_0065540
421 Ga0501036_0000200
422 Ga0501036_0000448
423 Ga0501037_0051200
424 Ga0501037_0108888
425 Ga0501038_0002593
426 Ga0501038_0033401
427 Ga0501039_0000480
428 Ga0501039_0000679
429 Ga0501040_0000032
430 Ga0501040_0000079
431 Ga0501041_0000331
432 Ga0501041_0000507
433 Ga0501042_0000061
434 Ga0501042_0003971
435 Ga0501042_0084064
436 Ga0501046_0003533
437 Ga0501046_0005222
438 Ga0501047_0058569
439 Ga0501048_0000777
440 Ga0501048_0001066
441 Ga0501067_0000435
442 Ga0501069_0007415
443 Ga0501069_0033636
444 Ga0501070_0038050
445 Ga0501071_0010719
446 Ga0501072_0000281
447 Ga0501072_0010583
448 Ga0501072_0030417
449 Ga0501074_0002867
450 Ga0501075_0001325
451 Ga0501075_0005568
452 Ga0501076_0000018
453 Ga0501076_0000103
454 Ga0501076_0148432
455 Ga0501077_0000405
456 Ga0501077_0000483
457 Ga0501079_0000405
458 Ga0501079_0002967
459 Ga0501080_0063223
460 Ga0501081_0002999
461 Ga0501081_0025172
462 Ga0501035_0022343
463 Ga0501045_0001014
464 Ga0501045_0004547
465 nmdc:mga03683_16207_c1
466 nmdc:mga00v17_5101_c1
467 nmdc:mga0k408_516_c1
468 nmdc:mga05p37_20720_c1
469 nmdc:mga05p37_22745_c1
470 nmdc:mga05p37_413620_c1
471 nmdc:mga09592_38290_c1
472 nmdc:mga0qj67_12559_c1
473 nmdc:mga0qj67_25435_c1
474 nmdc:mga06r32_111919_c1
475 nmdc:mga06r32_294832_c1
476 nmdc:mga08y16_251_c1
477 nmdc:mga0n895_147301_c1
478 nmdc:mga0n895_25050_c1
479 nmdc:mga0rr50_39337_c1
480 nmdc:mga0rr50_61174_c1
481 nmdc:mga0a205_278041_c1
482 nmdc:mga0a205_31128_c1
483 Ga0500573_0093084
484 Ga0501084_0004117
485 Ga0501084_0045969
486 Ga0590075_001790
487 Ga0501082_0000096
488 Ga0501082_0001155
489 Ga0530510_0000310
490 Ga0530510_0002708
491 2676486076
492 2837269161
493 2867375241
494 2873157825

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

44

99

0.97

PF00155

Aminotran_1_2

Aminotransferase class I and II

117

452

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3by6-assembly3.cif.gz_C crystal structure of a transcriptional regulator from oenococcus oeni 0.9753 14 79
6sbs-assembly1.cif.gz_A ytra from sulfolobus acidocaldarius, a gntr-family transcription factor 0.9691 14 79
2wv0-assembly5.cif.gz_I crystal structure of the gntr-hutc family member yvoa from bacillus subtilis 0.9576 14 77
3neu-assembly1.cif.gz_A-2 the crystal structure of a functionally-unknown protein lin1836 from listeria innocua clip11262 0.9572 14 79
4wwc-assembly1.cif.gz_B crystal structure of full length yvoa in complex with palindromic operator dna 0.9568 14 79
ID Description Score Start End Superfamily
4hamA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9828 14 77 1.10.10.10
af_Q2FWW6_10_126_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9742 14 79 1.10.10.10
af_P0ACM5_16_95_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.974 14 79 1.10.10.10
3by6E01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9693 14 77 1.10.10.10
af_Q2G1P1_1_44_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9658 35 76 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A502FTY1-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9482 92 382 GO:0008483
GO:0009058
GO:0030170
GO:1901605
AF-A0A2X2TZ36-F1-model_v4 deleted 0.9466 208 433
AF-X8FER7-F1-model_v4 deleted 0.9452 115 277
AF-A0A2V2QUX0-F1-model_v4 deleted 0.942 91 432
AF-A0A7J9ZC49-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9418 283 438 GO:0008483
GO:0009058
GO:0030170

Map