F358653

General Info

Members Datasets Scaffolds Average Seq Length
247 176 494 326

Family's Representative Sequence

Representative Sequence 3300002067|JGI24735J21928_10002433|JGI24735J21928_100024335
Length 361
Sequence MPAKAGIHLLPRHPRANGCEMDPSLRWGDEKATEEGMKLLARIERWPVAGAFTISRGAKTHVDVVMAEILDGDHVGRGEGTPIYYHGESAESVLAQIQGQAEAIASGLSRNELQTRLPRGAARNALDCALWDLESKRNGVPVWKLAGLPAPRSLVTAFTISLGPAERMEADARASAHLPLLKLKLAGEGDEARVAAVRRGAPEARLIVDANEAWTGRDVAAEAAILAAYGVELIEQPVDRARDDLLDGVAGPIPFAADESCQDRADLPRLAGRYQAVNIKLDKAGGLTEAIALAAEARALGLEIMVGCMLGTSLGMAPAFMVSGGAKWVDLDGALLLAEDRPAAMACENGLLEPPGPDLWG

Samples

Sample ID Description Type Environment
1 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
5 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
6 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
71 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
116 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
117 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
118 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
125 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
126 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
127 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
131 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
132 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
138 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
139 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
140 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
141 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
142 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
143 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
144 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
147 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
148 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
151 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
152 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
153 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
154 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
155 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
156 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
157 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
158 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
159 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
160 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
161 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
162 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
164 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
165 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
166 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
167 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
168 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
169 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
170 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
171 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
172 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
173 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
174 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
175 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
176 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.5
Nodule 0
Rhizoplane 1.62
Rhizosphere 83.81
Stem 0
Stem Tuber 0
Unclassified 1.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10002433 3300002067 Bacteria 6462
2 JGI24739J22299_10003164 3300001989 Bacteria 6285
3 JGI24739J22299_10003735 3300001989 Bacteria 5813
4 JGI24737J22298_10001339 3300001990 Bacteria 8718
5 JGI24735J21928_10000667 3300002067 Bacteria 12140
6 JGI24735J21928_10008033 3300002067 Bacteria 3426
7 JGI24735J21928_10018981 3300002067 Bacteria 2118
8 JGI24735J21928_10026951 3300002067 Bacteria 1724
9 JGI24738J21930_10000127 3300002075 Bacteria 18510
10 JGI24744J21845_10006692 3300002077 Bacteria 2387
11 JGI24751J29686_10014133 3300002459 Bacteria 1649
12 JGI25165J46597_1000023 3300003214 Bacteria 338873
13 Ga0065712_10002360 3300005290 Unclassified 4748
14 Ga0070658_10000143 3300005327 Bacteria 63183
15 Ga0070658_10001328 3300005327 Bacteria 21086
16 Ga0070658_10013049 3300005327 Bacteria 6667
17 Ga0070676_10000104 3300005328 Bacteria 30258
18 Ga0070670_100000503 3300005331 Bacteria 31380
19 Ga0068869_100001148 3300005334 Bacteria 15451
20 Ga0070666_10000177 3300005335 Bacteria 43707
21 Ga0068868_100000073 3300005338 Bacteria 58910
22 Ga0070660_100001837 3300005339 Bacteria 14583
23 Ga0070660_100004288 3300005339 Bacteria 9851
24 Ga0070668_100001777 3300005347 Bacteria 15675
25 Ga0070669_100000136 3300005353 Bacteria 66350
26 Ga0070669_100036034 3300005353 Bacteria 3584
27 Ga0070675_100028827 3300005354 Bacteria 4471
28 Ga0070671_100000081 3300005355 Bacteria 60882
29 Ga0070671_100013649 3300005355 Bacteria 6551
30 Ga0070671_100078618 3300005355 Bacteria 2757
31 Ga0070673_100000047 3300005364 Bacteria 50070
32 Ga0070659_100132404 3300005366 Bacteria 2026
33 Ga0070659_100231648 3300005366 Bacteria 1527
34 Ga0070708_100000747 3300005445 Bacteria 24614
35 Ga0070663_100017322 3300005455 Bacteria 4701
36 Ga0070678_100015392 3300005456 Bacteria 4861
37 Ga0070662_100005804 3300005457 Bacteria 7915
38 Ga0070662_100092570 3300005457 Bacteria 2273
39 Ga0068867_100000119 3300005459 Bacteria 50149
40 Ga0068853_100009676 3300005539 Bacteria 7770
41 Ga0068853_100085644 3300005539 Bacteria 2763
42 Ga0068855_100000207 3300005563 Bacteria 75310
43 Ga0068855_100002918 3300005563 Bacteria 20929
44 Ga0068855_100066095 3300005563 Bacteria 4216
45 Ga0068855_100099367 3300005563 Bacteria 3352
46 Ga0068857_100214658 3300005577 Bacteria 1756
47 Ga0068854_100000150 3300005578 Bacteria 48471
48 Ga0068856_100007134 3300005614 Bacteria 10901
49 Ga0068856_100009674 3300005614 Bacteria 9361
50 Ga0068856_100023971 3300005614 Bacteria 5935
51 Ga0068852_100013079 3300005616 Bacteria 6338
52 Ga0068859_100000484 3300005617 Bacteria 39271
53 Ga0068864_100004028 3300005618 Bacteria 12068
54 Ga0068866_10071402 3300005718 Bacteria 1836
55 Ga0068861_100006084 3300005719 Bacteria 8210
56 Ga0068863_100071370 3300005841 Bacteria 3285
57 Ga0068858_100005227 3300005842 Bacteria 12718
58 Ga0068860_100002238 3300005843 Bacteria 20365
59 Ga0068862_100000924 3300005844 Bacteria 28406
60 Ga0081539_10011523 3300005985 Bacteria 6974
61 Ga0097621_100031794 3300006237 Bacteria 4189
62 Ga0068871_100002786 3300006358 Bacteria 11948
63 Ga0068865_100000005 3300006881 Bacteria 213248
64 Ga0097620_100000484 3300006931 Bacteria 39271
65 Ga0105240_10007223 3300009093 Bacteria 16179
66 Ga0105240_10069475 3300009093 Bacteria 4360
67 Ga0105240_10167129 3300009093 Bacteria 2608
68 Ga0105245_10000281 3300009098 Bacteria 48386
69 Ga0105247_10000201 3300009101 Bacteria 58586
70 Ga0105243_10000411 3300009148 Bacteria 44928
71 Ga0105242_10000752 3300009176 Bacteria 25259
72 Ga0105248_10009254 3300009177 Bacteria 10839
73 Ga0105237_10452325 3300009545 Bacteria 1290
74 Ga0105249_10000797 3300009553 Bacteria 28324
75 Ga0105239_10241106 3300010375 Bacteria 2029
76 Ga0105239_10564478 3300010375 Bacteria 1297
77 Ga0105246_10001218 3300011119 Bacteria 15076
78 Ga0157373_10063958 3300013100 Bacteria 2604
79 Ga0157370_10005212 3300013104 Bacteria 14650
80 Ga0157369_10103825 3300013105 Bacteria 3028
81 Ga0157374_10006536 3300013296 Bacteria 9899
82 Ga0157374_10049511 3300013296 Bacteria 3903
83 Ga0157374_10299239 3300013296 Unclassified 1591
84 Ga0163162_10061867 3300013306 Bacteria 3782
85 Ga0157372_10075247 3300013307 Bacteria 3810
86 Ga0157372_10162862 3300013307 Bacteria 2578
87 Ga0157375_10001046 3300013308 Bacteria 23878
88 Ga0163163_10003525 3300014325 Bacteria 13287
89 Ga0157379_10031557 3300014968 Bacteria 4721
90 Ga0157376_10000502 3300014969 Bacteria 25340
91 Ga0163161_10106963 3300017792 Bacteria 2088
92 Ga0209147_101503 3300025229 Bacteria 8236
93 Ga0207427_101594 3300025231 Bacteria 7774
94 Ga0209148_1000208 3300025254 Bacteria 103781
95 Ga0209233_1000003 3300025261 Bacteria 1607366
96 Ga0209455_1001931 3300025272 Bacteria 8562
97 Ga0207697_10000455 3300025315 Bacteria 23064
98 Ga0207642_10129527 3300025899 Bacteria 1314
99 Ga0207680_10004193 3300025903 Bacteria 6822
100 Ga0207647_10001133 3300025904 Bacteria 20536
101 Ga0207647_10003962 3300025904 Bacteria 11051
102 Ga0207645_10001707 3300025907 Bacteria 17826
103 Ga0207705_10000046 3300025909 Bacteria 177574
104 Ga0207705_10000299 3300025909 Bacteria 46209
105 Ga0207705_10026863 3300025909 Bacteria 4102
106 Ga0207705_10082112 3300025909 Bacteria 2350
107 Ga0207695_10007870 3300025913 Bacteria 13457
108 Ga0207695_10052027 3300025913 Bacteria 4294
109 Ga0207695_10075462 3300025913 Bacteria 3430
110 Ga0207671_10070135 3300025914 Bacteria 2612
111 Ga0207660_10321448 3300025917 Bacteria 1236
112 Ga0207657_10001505 3300025919 Bacteria 24921
113 Ga0207657_10001640 3300025919 Bacteria 24119
114 Ga0207657_10059065 3300025919 Bacteria 3298
115 Ga0207657_10389042 3300025919 Bacteria 1097
116 Ga0207681_10000046 3300025923 Bacteria 127902
117 Ga0207681_10027936 3300025923 Bacteria 3653
118 Ga0207694_10126752 3300025924 Bacteria 2043
119 Ga0207650_10001094 3300025925 Bacteria 20023
120 Ga0207659_10001183 3300025926 Bacteria 15598
121 Ga0207687_10001504 3300025927 Bacteria 15964
122 Ga0207644_10000038 3300025931 Bacteria 121482
123 Ga0207644_10024601 3300025931 Bacteria 4135
124 Ga0207644_10059759 3300025931 Bacteria 2757
125 Ga0207690_10084987 3300025932 Bacteria 2220
126 Ga0207706_10001526 3300025933 Bacteria 22983
127 Ga0207706_10041414 3300025933 Bacteria 4083
128 Ga0207706_10046216 3300025933 Bacteria 3855
129 Ga0207686_10010558 3300025934 Bacteria 5031
130 Ga0207709_10000051 3300025935 Bacteria 227968
131 Ga0207704_10000001 3300025938 Bacteria 716296
132 Ga0207691_10015263 3300025940 Bacteria 7308
133 Ga0207689_10001171 3300025942 Bacteria 25256
134 Ga0207667_10000024 3300025949 Bacteria 355874
135 Ga0207667_10000464 3300025949 Bacteria 54597
136 Ga0207667_10070527 3300025949 Bacteria 3636
137 Ga0207651_10000006 3300025960 Bacteria 227893
138 Ga0207712_10001288 3300025961 Bacteria 17225
139 Ga0207668_10000626 3300025972 Bacteria 21905
140 Ga0207668_10046157 3300025972 Bacteria 2975
141 Ga0207640_10001061 3300025981 Bacteria 15212
142 Ga0207658_10001112 3300025986 Bacteria 21725
143 Ga0207677_10000156 3300026023 Bacteria 54081
144 Ga0207703_10002154 3300026035 Bacteria 17303
145 Ga0207639_10025193 3300026041 Bacteria 4313
146 Ga0207639_10089213 3300026041 Bacteria 2463
147 Ga0207639_10409636 3300026041 Bacteria 1223
148 Ga0207678_10002489 3300026067 Bacteria 16752
149 Ga0207702_10017636 3300026078 Bacteria 5908
150 Ga0207702_10204559 3300026078 Bacteria 1832
151 Ga0207641_10002154 3300026088 Bacteria 18554
152 Ga0207648_10000363 3300026089 Bacteria 50049
153 Ga0207676_10001265 3300026095 Bacteria 18803
154 Ga0207674_10005854 3300026116 Bacteria 14578
155 Ga0207674_10231644 3300026116 Bacteria 1795
156 Ga0207675_100000048 3300026118 Bacteria 84512
157 Ga0207683_10002426 3300026121 Bacteria 16267
158 Ga0207698_10001519 3300026142 Bacteria 13519
159 Ga0207698_10339106 3300026142 Bacteria 1415
160 Ga0207698_10383554 3300026142 Bacteria 1338
161 Ga0268265_10000269 3300028380 Bacteria 58934
162 Ga0268265_10032466 3300028380 Bacteria 3784
163 Ga0268264_10000406 3300028381 Bacteria 61180
164 Ga0307413_10054280 3300031824 Bacteria 2430
165 Ga0307409_100153463 3300031995 Bacteria 2003
166 Ga0307416_100052693 3300032002 Bacteria 3259
167 Ga0307414_10019587 3300032004 Bacteria 4196
168 Ga0395899_0002140 3300037312 Bacteria 16242
169 Ga0395900_0021853 3300037418 Bacteria 6542
170 Ga0395905_0087709 3300037471 Bacteria 2917
171 Ga0395905_0176309 3300037471 Bacteria 2007
172 Ga0395901_0046059 3300038443 Bacteria 4529
173 Ga0436365_1495533 3300039437 Bacteria 2184
174 Ga0451806_160156 3300041462 Bacteria 7941
175 Ga0439448_0018140 3300042005 Bacteria 2153
176 Ga0439448_0020557 3300042005 Bacteria 2043
177 Ga0439455_0000242 3300042012 Bacteria 6563
178 Ga0439455_0000868 3300042012 Bacteria 4648
179 Ga0439455_0005049 3300042012 Bacteria 2659
180 Ga0439455_0015426 3300042012 Bacteria 1756
181 Ga0439458_0000365 3300042157 Bacteria 11389
182 Ga0439458_0001754 3300042157 Bacteria 5407
183 Ga0466966_0024805 3300044684 Bacteria 3922
184 Ga0466961_0001209 3300044693 Bacteria 15893
185 Ga0466963_0000296 3300044694 Bacteria 22383
186 Ga0466964_0007057 3300044706 Bacteria 4201
187 Ga0466964_0086131 3300044706 Bacteria 1358
188 Ga0466971_0003712 3300044719 Bacteria 6532
189 Ga0466957_0069303 3300044842 Bacteria 2179
190 Ga0466960_0004070 3300044901 Bacteria 5677
191 Ga0466958_0016266 3300045836 Bacteria 4280
192 Ga0466967_0008478 3300045976 Bacteria 7541
193 Ga0495617_006280 3300046452 Bacteria 4178
194 Ga0495627_000036 3300046453 Bacteria 205589
195 Ga0495627_000112 3300046453 Bacteria 101337
196 Ga0495638_0106301 3300046460 Bacteria 1672
197 Ga0495606_0003661 3300046507 Bacteria 16102
198 Ga0495610_0000124 3300046512 Bacteria 86704
199 Ga0495637_0000367 3300046520 Bacteria 34078
200 Ga0495648_0009892 3300046524 Bacteria 7325
201 Ga0495597_0089899 3300046542 Bacteria 1305
202 Ga0495668_0022653 3300046616 Bacteria 3590
203 Ga0495668_0121304 3300046616 Bacteria 1430
204 Ga0495625_0003783 3300046660 Bacteria 14689
205 Ga0495687_033954 3300047443 Bacteria 2310
206 Ga0495681_0000013 3300047470 Bacteria 189155
207 Ga0495686_0002121 3300047472 Bacteria 19422
208 Ga0495686_0004170 3300047472 Bacteria 12014
209 Ga0495686_0008802 3300047472 Bacteria 7352
210 Ga0496107_0194347 3300048910 Bacteria 1508
211 Ga0496108_0236501 3300048911 Unclassified 1589
212 Ga0496111_0050854 3300048914 Bacteria 2991
213 Ga0496117_0134731 3300048920 Bacteria 1490
214 Ga0496118_0000606 3300048921 Bacteria 59016
215 Ga0496118_0036253 3300048921 Bacteria 3990
216 Ga0496118_0124443 3300048921 Bacteria 1672
217 Ga0496119_0020701 3300048922 Bacteria 4784
218 Ga0496120_0056020 3300048923 Bacteria 2227
219 Ga0496121_0014364 3300048924 Bacteria 8411
220 Ga0496121_0020162 3300048924 Bacteria 6619
221 Ga0496122_0001683 3300048925 Bacteria 34269
222 Ga0496122_0026231 3300048925 Bacteria 5032
223 Ga0496124_0056678 3300048927 Bacteria 3304
224 Ga0496124_0068057 3300048927 Bacteria 2961
225 Ga0496124_0076331 3300048927 Bacteria 2766
226 Ga0496125_0030862 3300048928 Bacteria 4786
227 Ga0495678_024009 3300049459 Bacteria 2640
228 Ga0501038_0057789 3300049574 Bacteria 3329
229 Ga0501225_0009963 3300049705 Bacteria 2698
230 nmdc:mga06z11_63_c1 3300050494 Bacteria 44638
231 Ga0500643_000129 3300053087 Bacteria 77787
232 Ga0500643_001518 3300053087 Bacteria 13246
233 Ga0500643_001690 3300053087 Bacteria 12274
234 Ga0500643_004468 3300053087 Bacteria 6320
235 Ga0500556_0000027 3300053104 Bacteria 165855
236 Ga0500592_000041 3300053116 Bacteria 40085
237 Ga0500608_022316 3300053122 Bacteria 2934
238 Ga0500608_063675 3300053122 Bacteria 1760
239 Ga0500642_0000003 3300053130 Bacteria 544899
240 Ga0500577_0004589 3300053142 Bacteria 3666
241 Ga0500616_0037167 3300053153 Bacteria 2637
242 Ga0500624_000072 3300053157 Bacteria 57950
243 Ga0500627_0000157 3300053158 Bacteria 20081
244 Ga0500645_000205 3300053730 Bacteria 45699
245 Ga0466962_0001398 3300061719 Bacteria 11230
246 Ga0466962_0070861 3300061719 Bacteria 1666
247 2512642320 2512564014 Bacteria 4639632
248 JGI24735J21928_10002433
249 JGI24739J22299_10003164
250 JGI24739J22299_10003735
251 JGI24737J22298_10001339
252 JGI24735J21928_10000667
253 JGI24735J21928_10008033
254 JGI24735J21928_10018981
255 JGI24735J21928_10026951
256 JGI24738J21930_10000127
257 JGI24744J21845_10006692
258 JGI24751J29686_10014133
259 JGI25165J46597_1000023
260 Ga0065712_10002360
261 Ga0070658_10000143
262 Ga0070658_10001328
263 Ga0070658_10013049
264 Ga0070676_10000104
265 Ga0070670_100000503
266 Ga0068869_100001148
267 Ga0070666_10000177
268 Ga0068868_100000073
269 Ga0070660_100001837
270 Ga0070660_100004288
271 Ga0070668_100001777
272 Ga0070669_100000136
273 Ga0070669_100036034
274 Ga0070675_100028827
275 Ga0070671_100000081
276 Ga0070671_100013649
277 Ga0070671_100078618
278 Ga0070673_100000047
279 Ga0070659_100132404
280 Ga0070659_100231648
281 Ga0070708_100000747
282 Ga0070663_100017322
283 Ga0070678_100015392
284 Ga0070662_100005804
285 Ga0070662_100092570
286 Ga0068867_100000119
287 Ga0068853_100009676
288 Ga0068853_100085644
289 Ga0068855_100000207
290 Ga0068855_100002918
291 Ga0068855_100066095
292 Ga0068855_100099367
293 Ga0068857_100214658
294 Ga0068854_100000150
295 Ga0068856_100007134
296 Ga0068856_100009674
297 Ga0068856_100023971
298 Ga0068852_100013079
299 Ga0068859_100000484
300 Ga0068864_100004028
301 Ga0068866_10071402
302 Ga0068861_100006084
303 Ga0068863_100071370
304 Ga0068858_100005227
305 Ga0068860_100002238
306 Ga0068862_100000924
307 Ga0081539_10011523
308 Ga0097621_100031794
309 Ga0068871_100002786
310 Ga0068865_100000005
311 Ga0097620_100000484
312 Ga0105240_10007223
313 Ga0105240_10069475
314 Ga0105240_10167129
315 Ga0105245_10000281
316 Ga0105247_10000201
317 Ga0105243_10000411
318 Ga0105242_10000752
319 Ga0105248_10009254
320 Ga0105237_10452325
321 Ga0105249_10000797
322 Ga0105239_10241106
323 Ga0105239_10564478
324 Ga0105246_10001218
325 Ga0157373_10063958
326 Ga0157370_10005212
327 Ga0157369_10103825
328 Ga0157374_10006536
329 Ga0157374_10049511
330 Ga0157374_10299239
331 Ga0163162_10061867
332 Ga0157372_10075247
333 Ga0157372_10162862
334 Ga0157375_10001046
335 Ga0163163_10003525
336 Ga0157379_10031557
337 Ga0157376_10000502
338 Ga0163161_10106963
339 Ga0209147_101503
340 Ga0207427_101594
341 Ga0209148_1000208
342 Ga0209233_1000003
343 Ga0209455_1001931
344 Ga0207697_10000455
345 Ga0207642_10129527
346 Ga0207680_10004193
347 Ga0207647_10001133
348 Ga0207647_10003962
349 Ga0207645_10001707
350 Ga0207705_10000046
351 Ga0207705_10000299
352 Ga0207705_10026863
353 Ga0207705_10082112
354 Ga0207695_10007870
355 Ga0207695_10052027
356 Ga0207695_10075462
357 Ga0207671_10070135
358 Ga0207660_10321448
359 Ga0207657_10001505
360 Ga0207657_10001640
361 Ga0207657_10059065
362 Ga0207657_10389042
363 Ga0207681_10000046
364 Ga0207681_10027936
365 Ga0207694_10126752
366 Ga0207650_10001094
367 Ga0207659_10001183
368 Ga0207687_10001504
369 Ga0207644_10000038
370 Ga0207644_10024601
371 Ga0207644_10059759
372 Ga0207690_10084987
373 Ga0207706_10001526
374 Ga0207706_10041414
375 Ga0207706_10046216
376 Ga0207686_10010558
377 Ga0207709_10000051
378 Ga0207704_10000001
379 Ga0207691_10015263
380 Ga0207689_10001171
381 Ga0207667_10000024
382 Ga0207667_10000464
383 Ga0207667_10070527
384 Ga0207651_10000006
385 Ga0207712_10001288
386 Ga0207668_10000626
387 Ga0207668_10046157
388 Ga0207640_10001061
389 Ga0207658_10001112
390 Ga0207677_10000156
391 Ga0207703_10002154
392 Ga0207639_10025193
393 Ga0207639_10089213
394 Ga0207639_10409636
395 Ga0207678_10002489
396 Ga0207702_10017636
397 Ga0207702_10204559
398 Ga0207641_10002154
399 Ga0207648_10000363
400 Ga0207676_10001265
401 Ga0207674_10005854
402 Ga0207674_10231644
403 Ga0207675_100000048
404 Ga0207683_10002426
405 Ga0207698_10001519
406 Ga0207698_10339106
407 Ga0207698_10383554
408 Ga0268265_10000269
409 Ga0268265_10032466
410 Ga0268264_10000406
411 Ga0307413_10054280
412 Ga0307409_100153463
413 Ga0307416_100052693
414 Ga0307414_10019587
415 Ga0395899_0002140
416 Ga0395900_0021853
417 Ga0395905_0087709
418 Ga0395905_0176309
419 Ga0395901_0046059
420 Ga0436365_1495533
421 Ga0451806_160156
422 Ga0439448_0018140
423 Ga0439448_0020557
424 Ga0439455_0000242
425 Ga0439455_0000868
426 Ga0439455_0005049
427 Ga0439455_0015426
428 Ga0439458_0000365
429 Ga0439458_0001754
430 Ga0466966_0024805
431 Ga0466961_0001209
432 Ga0466963_0000296
433 Ga0466964_0007057
434 Ga0466964_0086131
435 Ga0466971_0003712
436 Ga0466957_0069303
437 Ga0466960_0004070
438 Ga0466958_0016266
439 Ga0466967_0008478
440 Ga0495617_006280
441 Ga0495627_000036
442 Ga0495627_000112
443 Ga0495638_0106301
444 Ga0495606_0003661
445 Ga0495610_0000124
446 Ga0495637_0000367
447 Ga0495648_0009892
448 Ga0495597_0089899
449 Ga0495668_0022653
450 Ga0495668_0121304
451 Ga0495625_0003783
452 Ga0495687_033954
453 Ga0495681_0000013
454 Ga0495686_0002121
455 Ga0495686_0004170
456 Ga0495686_0008802
457 Ga0496107_0194347
458 Ga0496108_0236501
459 Ga0496111_0050854
460 Ga0496117_0134731
461 Ga0496118_0000606
462 Ga0496118_0036253
463 Ga0496118_0124443
464 Ga0496119_0020701
465 Ga0496120_0056020
466 Ga0496121_0014364
467 Ga0496121_0020162
468 Ga0496122_0001683
469 Ga0496122_0026231
470 Ga0496124_0056678
471 Ga0496124_0068057
472 Ga0496124_0076331
473 Ga0496125_0030862
474 Ga0495678_024009
475 Ga0501038_0057789
476 Ga0501225_0009963
477 nmdc:mga06z11_63_c1
478 Ga0500643_000129
479 Ga0500643_001518
480 Ga0500643_001690
481 Ga0500643_004468
482 Ga0500556_0000027
483 Ga0500592_000041
484 Ga0500608_022316
485 Ga0500608_063675
486 Ga0500642_0000003
487 Ga0500577_0004589
488 Ga0500616_0037167
489 Ga0500624_000072
490 Ga0500627_0000157
491 Ga0500645_000205
492 Ga0466962_0001398
493 Ga0466962_0070861
494 2512642320

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02746

MR_MLE_N

Mandelate racemase / muconate lactonizing enzyme, N-terminal domain

37

147

0.94

PF13378

MR_MLE_C

Enolase C-terminal domain-like

165

356

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gfi-assembly4.cif.gz_D crystal structure of efi-502318, an enolase family member from agrobacterium tumefaciens with homology to dipeptide epimerases (bound sodium, l-ala-l-glu with ordered loop) 0.9776 1 326
1jpd-assembly1.cif.gz_X l-ala-d/l-glu epimerase 0.944 1 318
1jpd-assembly1.cif.gz_X l-ala-d/l-glu epimerase 0.9297 1 318
1jpm-assembly1.cif.gz_B l-ala-d/l-glu epimerase 0.9192 3 321
3rit-assembly2.cif.gz_B crystal structure of dipeptide epimerase from methylococcus capsulatus complexed with mg and dipeptide l-arg-d-lys 0.915 4 322
ID Description Score Start End Superfamily
4gfiD01 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain 0.9856 1 104 3.30.390.10
4gfiD01 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain 0.9763 1 104 3.30.390.10
4gfiC02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9691 108 326 3.20.20.120
1jpdX01 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain 0.9673 1 102 3.30.390.10
4gfiC02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9478 108 326 3.20.20.120
ID Description Score Start End GO Terms
AF-A0A3S1D8V7-F1-model_v4 Dipeptide epimerase 0.9987 239 326 GO:0003824
GO:0016020
AF-A0A437M889-F1-model_v4 Dipeptide epimerase (EC 5.1.1.-) 0.9972 1 326 GO:0016855
GO:0046872
AF-A0A227IJM1-F1-model_v4 Dipeptide epimerase 0.9942 225 301 GO:0016854
AF-A0A437M889-F1-model_v4 Dipeptide epimerase (EC 5.1.1.-) 0.9941 1 326 GO:0016855
GO:0046872
AF-A0A529PFP6-F1-model_v4 Dipeptide epimerase 0.9913 243 326 GO:0016020

Map