F358627

General Info

Members Datasets Scaffolds Average Seq Length
246 154 240 572

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|643348555|643392418
Length 683
Sequence SDQDQSEDSGLPVPPDDGPGLFGDSPSPAAPPPAPLVAPVAASGGASGAAKPYRVLARKYRPTTLDDLIGQDSTVRILRNAFALGRVAHAFMLTGVRGVGKTTTARIIARALNCVGPDGTGGPTADPCGVCANCVAILADRHPDVLEMDAASRTGVDDVREIIEATRFRPMQGRMKVFIIDEVHMLSRNAFNALLKTLEEPPAQVTFVFATTELRKVPVTVLSRCQRFDLRRVPQSDLAAHFGRIARAEGAECTPDALALIARAADGSVRDGLSLLDQAIAQGSVEGDGAAPIGAERVADMLGLADRGRVFDLLEAVLAGQPDRALAITDEAHARGADLGVMLGDVLELVHTVSRLKAVPALRQSADLPEAERERGGALADRLSVPVLGRTWQMLLKGLSEVEMAPDRREAAEMILIRLCYVADLPPPGDLVRRLTEGGETGGSGSGALSGGPAQGTSQGTSASGLSVPGRPVSGNPVSGGQVMAHGGLRMVANGGVRIADPVAEPAPEPVPVEPAPEPEPDAAALTTWREVVAFVSGRDAMLHGHLRHSTHLVEFAPPRIAIRVDRAGLPGLTRRLETLLRRETGQAWEVRASTEAGQPTLAEQGAEIIQFHRAAAEAHPLVRAIFARFPDAILGAVTDHSLDDYGLPPEEAASVVLAPDLEFAPLDAELVDEDDLDVNDDR

Samples

Sample ID Description Type Environment
1 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
2 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
3 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
4 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
5 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
57 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
58 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
94 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
97 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
98 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
99 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
100 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
105 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
106 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
107 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
108 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
109 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
110 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
118 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
119 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
124 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
125 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
126 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
145 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
146 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
147 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
148 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
149 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
150 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
151 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
154 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.56
Metatranscriptomes 0
Isolates 2.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.28
Nodule 0
Rhizoplane 0.81
Rhizosphere 83.33
Stem 0
Stem Tuber 0
Unclassified 10.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055530_10007826 3300003791 Bacteria 4411
2 Ga0055531_10003745 3300003794 Bacteria 9552
3 Ga0065165_1001513 3300005262 Bacteria 24537
4 Ga0070670_100000007 3300005331 Bacteria 318672
5 Ga0070680_100001145 3300005336 Bacteria 19023
6 Ga0070680_100003915 3300005336 Bacteria 11132
7 Ga0070691_10017812 3300005341 Bacteria 3268
8 Ga0070691_10041043 3300005341 Bacteria 2187
9 Ga0070661_100000135 3300005344 Bacteria 61669
10 Ga0070668_100000835 3300005347 Bacteria 21310
11 Ga0070669_100002041 3300005353 Bacteria 14610
12 Ga0070659_100000209 3300005366 Bacteria 45573
13 Ga0070667_100000155 3300005367 Bacteria 85527
14 Ga0070667_100012748 3300005367 Bacteria 6950
15 Ga0070714_100038481 3300005435 Bacteria 4020
16 Ga0070713_100000006 3300005436 Bacteria 190565
17 Ga0070713_100052002 3300005436 Bacteria 3390
18 Ga0070711_100036579 3300005439 Bacteria 3289
19 Ga0070681_10019999 3300005458 Bacteria 6708
20 Ga0070681_10067137 3300005458 Bacteria 3555
21 Ga0070679_100034208 3300005530 Bacteria 5036
22 Ga0068853_100002965 3300005539 Bacteria 12924
23 Ga0070665_100000837 3300005548 Bacteria 40130
24 Ga0070665_100001961 3300005548 Bacteria 23155
25 Ga0070665_100004749 3300005548 Bacteria 14144
26 Ga0070665_100179373 3300005548 Bacteria 2119
27 Ga0068855_100000529 3300005563 Bacteria 46748
28 Ga0068855_100018718 3300005563 Bacteria 8327
29 Ga0068855_100048405 3300005563 Bacteria 5017
30 Ga0068855_100068121 3300005563 Bacteria 4144
31 Ga0068857_100015266 3300005577 Bacteria 6704
32 Ga0068856_100000280 3300005614 Bacteria 55488
33 Ga0068856_100003425 3300005614 Bacteria 16032
34 Ga0068852_100077418 3300005616 Bacteria 2940
35 Ga0068859_100000930 3300005617 Bacteria 29992
36 Ga0068864_100000067 3300005618 Bacteria 115834
37 Ga0068864_100000128 3300005618 Bacteria 73813
38 Ga0068863_100000237 3300005841 Bacteria 58657
39 Ga0068863_100000360 3300005841 Bacteria 46300
40 Ga0068863_100001315 3300005841 Bacteria 24750
41 Ga0068863_100066684 3300005841 Bacteria 3404
42 Ga0068858_100000020 3300005842 Bacteria 175896
43 Ga0068858_100007195 3300005842 Bacteria 10791
44 Ga0068860_100000047 3300005843 Bacteria 213287
45 Ga0068862_100001031 3300005844 Bacteria 26791
46 Ga0081538_10015024 3300005981 Bacteria 6022
47 Ga0081538_10028741 3300005981 Bacteria 3815
48 Ga0070712_100000184 3300006175 Bacteria 34651
49 Ga0068871_100018880 3300006358 Bacteria 5253
50 Ga0068865_100006112 3300006881 Bacteria 7342
51 Ga0075436_100019024 3300006914 Bacteria 4704
52 Ga0097620_100000930 3300006931 Bacteria 29992
53 Ga0075435_100037218 3300007076 Bacteria 3873
54 Ga0105250_10014499 3300009092 Bacteria 3237
55 Ga0105240_10000055 3300009093 Bacteria 225380
56 Ga0105240_10003264 3300009093 Bacteria 25361
57 Ga0105240_10043684 3300009093 Bacteria 5700
58 Ga0105240_10081334 3300009093 Bacteria 3981
59 Ga0105240_10201211 3300009093 Bacteria 2334
60 Ga0105248_10000001 3300009177 Bacteria 1881304
61 Ga0105248_10000517 3300009177 Bacteria 43853
62 Ga0105248_10003956 3300009177 Bacteria 16383
63 Ga0105237_10005625 3300009545 Bacteria 14119
64 Ga0105238_10001987 3300009551 Bacteria 20595
65 Ga0105249_10001758 3300009553 Bacteria 18894
66 Ga0105249_10089212 3300009553 Bacteria 2881
67 Ga0105239_10009872 3300010375 Bacteria 10724
68 Ga0105239_10012800 3300010375 Bacteria 9333
69 Ga0157373_10001321 3300013100 Bacteria 18966
70 Ga0157370_10000438 3300013104 Bacteria 51999
71 Ga0157369_10003719 3300013105 Bacteria 18134
72 Ga0163162_10079772 3300013306 Bacteria 3339
73 Ga0157372_10022772 3300013307 Bacteria 6782
74 Ga0157372_10054642 3300013307 Bacteria 4456
75 Ga0163163_10002788 3300014325 Bacteria 14762
76 Ga0163163_10040542 3300014325 Bacteria 4547
77 Ga0157379_10000304 3300014968 Bacteria 38893
78 Ga0157379_10023039 3300014968 Bacteria 5520
79 Ga0157379_10039266 3300014968 Bacteria 4223
80 Ga0213872_10014478 3300021361 Bacteria 3680
81 Ga0213876_10000167 3300021384 Bacteria 69385
82 Ga0213876_10000322 3300021384 Bacteria 41914
83 Ga0213875_10000077 3300021388 Bacteria 116884
84 Ga0213875_10005753 3300021388 Bacteria 6603
85 Ga0213875_10006084 3300021388 Bacteria 6382
86 Ga0209026_1001197 3300025250 Bacteria 12016
87 Ga0209676_1000269 3300025292 Bacteria 108375
88 Ga0209758_1000894 3300025297 Bacteria 40579
89 Ga0209050_1000173 3300025298 Bacteria 149800
90 Ga0209257_1000196 3300025304 Bacteria 149656
91 Ga0209257_1004068 3300025304 Bacteria 11739
92 Ga0207696_1015560 3300025711 Bacteria 2574
93 Ga0207705_10000039 3300025909 Bacteria 193592
94 Ga0207705_10000600 3300025909 Bacteria 30156
95 Ga0207707_10000002 3300025912 Bacteria 1142054
96 Ga0207707_10123261 3300025912 Bacteria 2266
97 Ga0207695_10000012 3300025913 Bacteria 840961
98 Ga0207695_10000572 3300025913 Bacteria 75360
99 Ga0207695_10007614 3300025913 Bacteria 13721
100 Ga0207695_10013848 3300025913 Bacteria 9593
101 Ga0207695_10090798 3300025913 Bacteria 3069
102 Ga0207693_10001101 3300025915 Bacteria 24280
103 Ga0207693_10020777 3300025915 Bacteria 5221
104 Ga0207660_10001154 3300025917 Bacteria 17638
105 Ga0207660_10004147 3300025917 Bacteria 9428
106 Ga0207660_10007574 3300025917 Bacteria 7028
107 Ga0207657_10000381 3300025919 Bacteria 46762
108 Ga0207649_10000060 3300025920 Bacteria 99202
109 Ga0207652_10000197 3300025921 Bacteria 63525
110 Ga0207652_10001952 3300025921 Bacteria 17849
111 Ga0207652_10124078 3300025921 Bacteria 2300
112 Ga0207681_10003889 3300025923 Bacteria 9273
113 Ga0207650_10000030 3300025925 Bacteria 235824
114 Ga0207650_10096504 3300025925 Bacteria 2268
115 Ga0207700_10000020 3300025928 Bacteria 176182
116 Ga0207700_10091128 3300025928 Bacteria 2407
117 Ga0207664_10027161 3300025929 Bacteria 4336
118 Ga0207644_10000907 3300025931 Bacteria 18778
119 Ga0207690_10000116 3300025932 Bacteria 65776
120 Ga0207704_10019772 3300025938 Bacteria 3545
121 Ga0207711_10000001 3300025941 Bacteria 1325674
122 Ga0207711_10001710 3300025941 Bacteria 20197
123 Ga0207711_10002365 3300025941 Bacteria 16890
124 Ga0207667_10000026 3300025949 Bacteria 343713
125 Ga0207667_10010717 3300025949 Bacteria 10695
126 Ga0207667_10037590 3300025949 Bacteria 5174
127 Ga0207667_10051412 3300025949 Bacteria 4345
128 Ga0207712_10000758 3300025961 Bacteria 24361
129 Ga0207668_10000010 3300025972 Bacteria 185249
130 Ga0207668_10000108 3300025972 Bacteria 59119
131 Ga0207668_10031358 3300025972 Bacteria 3500
132 Ga0207658_10000265 3300025986 Bacteria 55108
133 Ga0207703_10000082 3300026035 Bacteria 110579
134 Ga0207703_10120927 3300026035 Bacteria 2248
135 Ga0207702_10000030 3300026078 Bacteria 178718
136 Ga0207702_10030722 3300026078 Bacteria 4475
137 Ga0207641_10000007 3300026088 Bacteria 441443
138 Ga0207641_10001651 3300026088 Bacteria 21777
139 Ga0207641_10007794 3300026088 Bacteria 8898
140 Ga0207641_10055315 3300026088 Bacteria 3369
141 Ga0207676_10000183 3300026095 Bacteria 55220
142 Ga0207676_10000241 3300026095 Bacteria 47707
143 Ga0207674_10000051 3300026116 Bacteria 116114
144 Ga0207698_10102086 3300026142 Bacteria 2380
145 Ga0209981_1001555 3300027378 Bacteria 2905
146 Ga0268266_10000003 3300028379 Bacteria 1701703
147 Ga0268266_10000656 3300028379 Bacteria 46813
148 Ga0268266_10005366 3300028379 Bacteria 11979
149 Ga0268265_10001171 3300028380 Bacteria 22981
150 Ga0268264_10000125 3300028381 Bacteria 186416
151 Ga0265318_10000388 3300028577 Bacteria 34328
152 Ga0307517_10001402 3300028786 Bacteria 40531
153 Ga0265338_10000011 3300028800 Bacteria 433370
154 Ga0265325_10000002 3300031241 Bacteria 396758
155 Ga0265325_10000027 3300031241 Bacteria 106598
156 Ga0265339_10001651 3300031249 Bacteria 16451
157 Ga0265339_10002449 3300031249 Bacteria 13290
158 Ga0265331_10000049 3300031250 Bacteria 182618
159 Ga0265331_10001113 3300031250 Bacteria 20686
160 Ga0265327_10002651 3300031251 Bacteria 18419
161 Ga0265316_10001218 3300031344 Bacteria 27729
162 Ga0307513_10000077 3300031456 Bacteria 134167
163 Ga0307513_10003700 3300031456 Bacteria 20671
164 Ga0307513_10010991 3300031456 Bacteria 11295
165 Ga0265313_10000335 3300031595 Bacteria 51231
166 Ga0265313_10004096 3300031595 Bacteria 11352
167 Ga0265314_10049823 3300031711 Bacteria 2929
168 Ga0373956_0036538 3300035119 Bacteria 2168
169 Ga0373957_0016223 3300035120 Bacteria 2577
170 Ga0373955_0013212 3300035172 Bacteria 3985
171 Ga0373924_0015406 3300035410 Bacteria 2907
172 Ga0373927_0000472 3300035695 Bacteria 30834
173 Ga0373933_0007268 3300035724 Bacteria 6039
174 Ga0373933_0023562 3300035724 Bacteria 3518
175 Ga0373933_0025081 3300035724 Bacteria 3417
176 Ga0373933_0039667 3300035724 Bacteria 2771
177 Ga0373947_0090527 3300035725 Bacteria 1907
178 Ga0373937_0000338 3300036401 Bacteria 44355
179 Ga0373937_0014826 3300036401 Bacteria 6884
180 Ga0373937_0026504 3300036401 Bacteria 5238
181 Ga0373937_0057065 3300036401 Bacteria 3586
182 Ga0373925_0000003 3300037068 Bacteria 362401
183 Ga0373925_0025075 3300037068 Bacteria 4355
184 Ga0373925_0133489 3300037068 Bacteria 1937
185 Ga0395905_0006903 3300037471 Bacteria 11351
186 Ga0436364_0024756 3300037853 Bacteria 185423
187 Ga0436364_0482473 3300037853 Bacteria 23518
188 Ga0436364_0482536 3300037853 Bacteria 2685
189 Ga0436364_1273206 3300037853 Bacteria 77554
190 Ga0395901_0041811 3300038443 Bacteria 4751
191 Ga0436365_0173471 3300039437 Bacteria 110650
192 Ga0436365_0881263 3300039437 Bacteria 1983
193 Ga0436365_1114398 3300039437 Bacteria 4072
194 Ga0436365_1291084 3300039437 Bacteria 167262
195 Ga0436360_0679693 3300039438 Bacteria 2303
196 Ga0436360_0824701 3300039438 Bacteria 3540
197 Ga0436361_0754707 3300039447 Bacteria 4871
198 Ga0495651_0010522 3300046462 Bacteria 7109
199 Ga0495608_0098930 3300046511 Bacteria 1882
200 Ga0495628_0039123 3300046516 Bacteria 3794
201 Ga0495645_0050813 3300046543 Bacteria 3017
202 Ga0495667_0011372 3300046559 Bacteria 6025
203 Ga0495657_0062535 3300046675 Bacteria 2459
204 Ga0495599_0034830 3300046678 Bacteria 3162
205 Ga0495669_0000044 3300046684 Bacteria 85633
206 Ga0495674_0046454 3300047319 Bacteria 3854
207 Ga0495680_0027096 3300047322 Bacteria 4714
208 Ga0495686_0000013 3300047472 Bacteria 489656
209 Ga0495686_0004549 3300047472 Bacteria 11369
210 Ga0495602_0004291 3300048088 Bacteria 14846
211 Ga0496102_0092119 3300048905 Bacteria 2806
212 Ga0496115_0003595 3300048918 Bacteria 11143
213 Ga0496119_0005374 3300048922 Bacteria 12310
214 Ga0496121_0000035 3300048924 Bacteria 374316
215 Ga0501033_0008798 3300049570 Bacteria 7805
216 Ga0501033_0027870 3300049570 Bacteria 4245
217 Ga0501037_0032549 3300049573 Bacteria 3851
218 Ga0501046_0014573 3300049580 Bacteria 6627
219 Ga0501047_0002943 3300049581 Bacteria 16145
220 Ga0501047_0043923 3300049581 Bacteria 4317
221 Ga0501047_0121903 3300049581 Bacteria 2489
222 Ga0501070_0000248 3300049586 Bacteria 50746
223 Ga0501070_0045841 3300049586 Bacteria 3636
224 Ga0501073_0006683 3300049589 Bacteria 8587
225 Ga0501080_0021588 3300049742 Bacteria 5960
226 Ga0501035_0011786 3300049822 Bacteria 8094
227 Ga0501044_0000644 3300049823 Bacteria 42176
228 Ga0501044_0003542 3300049823 Bacteria 17572
229 Ga0501044_0077378 3300049823 Bacteria 3374
230 Ga0501044_0188343 3300049823 Bacteria 2027
231 nmdc:mga00v17_13387_c1 3300050491 Bacteria 4553
232 nmdc:mga06z11_6144_c1 3300050494 Bacteria 4863
233 nmdc:mga07m45_2301_c1 3300050496 Bacteria 8942
234 nmdc:mga0rr50_17580_c1 3300050513 Bacteria 4778
235 Ga0495612_0001468 3300053078 Bacteria 9702
236 Ga0500635_0000133 3300053080 Bacteria 42884
237 Ga0495595_0024861 3300053084 Bacteria 2648
238 Ga0500562_005252 3300053108 Bacteria 3254
239 Ga0501084_0000971 3300054114 Bacteria 22218
240 Ga0501084_0015332 3300054114 Bacteria 6355

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050491 nmdc:mga00v17_13387_c1 nmdc:mga00v17_13387_c1_2916_4538 478
2 3300039438 Ga0436360_0679693 Ga0436360_0679693_63_1880 492
3 3300050496 nmdc:mga07m45_2301_c1 nmdc:mga07m45_2301_c1_2795_4606 496
4 3300054114 Ga0501084_0000971 Ga0501084_0000971_8055_9752 496
5 3300021361 Ga0213872_10014478 Ga0213872_100144782 497
6 3300046511 Ga0495608_0098930 Ga0495608_0098930_88_1806 497
7 3300049581 Ga0501047_0121903 Ga0501047_0121903_191_1903 500
8 3300049586 Ga0501070_0045841 Ga0501070_0045841_100_1812 500
9 3300050494 nmdc:mga06z11_6144_c1 nmdc:mga06z11_6144_c1_140_1945 500
10 3300025920 Ga0207649_10000060 Ga0207649_1000006064 505
11 3300031711 Ga0265314_10049823 Ga0265314_100498232 506
12 3300037853 Ga0436364_0024756 Ga0436364_0024756_113668_115320 506
13 3300005344 Ga0070661_100000135 Ga0070661_10000013553 508
14 3300009093 Ga0105240_10081334 Ga0105240_100813341 508
15 3300005436 Ga0070713_100052002 Ga0070713_1000520022 509
16 3300021384 Ga0213876_10000167 Ga0213876_1000016758 509
17 3300039437 Ga0436365_1291084 Ga0436365_1291084_5836_7566 509
18 3300028577 Ga0265318_10000388 Ga0265318_1000038838 510
19 3300049580 Ga0501046_0014573 Ga0501046_0014573_3118_4860 510
20 3300025292 Ga0209676_1000269 Ga0209676_1000269108 511
21 iso_pu_bacteria 641228493 641337424 511
22 3300005341 Ga0070691_10017812 Ga0070691_100178122 512
23 3300005563 Ga0068855_100018718 Ga0068855_1000187186 512
24 3300005577 Ga0068857_100015266 Ga0068857_1000152663 512
25 3300005614 Ga0068856_100003425 Ga0068856_1000034253 512
26 3300005616 Ga0068852_100077418 Ga0068852_1000774182 512
27 3300006914 Ga0075436_100019024 Ga0075436_1000190245 512
28 3300009093 Ga0105240_10003264 Ga0105240_1000326415 512
29 3300009545 Ga0105237_10005625 Ga0105237_100056252 512
30 3300009551 Ga0105238_10001987 Ga0105238_100019879 512
31 3300010375 Ga0105239_10009872 Ga0105239_100098724 512
32 3300013100 Ga0157373_10001321 Ga0157373_1000132116 512
33 3300013104 Ga0157370_10000438 Ga0157370_1000043841 512
34 3300013105 Ga0157369_10003719 Ga0157369_1000371912 512
35 3300013307 Ga0157372_10054642 Ga0157372_100546422 512
36 3300021388 Ga0213875_10006084 Ga0213875_100060844 512
37 3300025909 Ga0207705_10000039 Ga0207705_1000003959 512
38 3300025912 Ga0207707_10000002 Ga0207707_1000000265 512
39 3300025917 Ga0207660_10001154 Ga0207660_100011541 512
40 3300025921 Ga0207652_10000197 Ga0207652_1000019739 512
41 3300025949 Ga0207667_10010717 Ga0207667_100107174 512
42 3300026035 Ga0207703_10120927 Ga0207703_101209272 512
43 3300026078 Ga0207702_10030722 Ga0207702_100307222 512
44 3300026116 Ga0207674_10000051 Ga0207674_1000005180 512
45 3300026142 Ga0207698_10102086 Ga0207698_101020862 512
46 3300037853 Ga0436364_0482473 Ga0436364_0482473_20211_22136 512
47 3300005563 Ga0068855_100000529 Ga0068855_10000052934 513
48 3300009093 Ga0105240_10000055 Ga0105240_10000055226 513
49 3300010375 Ga0105239_10012800 Ga0105239_100128002 513
50 3300025913 Ga0207695_10000012 Ga0207695_10000012111 513
51 3300025949 Ga0207667_10000026 Ga0207667_10000026283 513
52 3300028800 Ga0265338_10000011 Ga0265338_10000011420 513
53 3300031241 Ga0265325_10000002 Ga0265325_1000000288 513
54 3300031249 Ga0265339_10002449 Ga0265339_100024494 513
55 3300031250 Ga0265331_10001113 Ga0265331_100011136 513
56 3300031595 Ga0265313_10004096 Ga0265313_100040967 513
57 3300035725 Ga0373947_0090527 Ga0373947_0090527_37_1812 513
58 3300031250 Ga0265331_10000049 Ga0265331_1000004989 514
59 3300049570 Ga0501033_0008798 Ga0501033_0008798_5530_7413 514
60 3300049573 Ga0501037_0032549 Ga0501037_0032549_1587_3470 514
61 3300021388 Ga0213875_10000077 Ga0213875_1000007777 515
62 3300025915 Ga0207693_10001101 Ga0207693_1000110126 515
63 3300025928 Ga0207700_10091128 Ga0207700_100911281 515
64 3300035724 Ga0373933_0023562 Ga0373933_0023562_759_2525 515
65 3300046516 Ga0495628_0039123 Ga0495628_0039123_958_2724 515
66 3300046678 Ga0495599_0034830 Ga0495599_0034830_184_1953 515
67 3300047319 Ga0495674_0046454 Ga0495674_0046454_1141_2907 515
68 3300048088 Ga0495602_0004291 Ga0495602_0004291_1151_2917 515
69 3300053078 Ga0495612_0001468 Ga0495612_0001468_1066_2832 515
70 3300005435 Ga0070714_100038481 Ga0070714_1000384814 516
71 3300005436 Ga0070713_100000006 Ga0070713_100000006168 516
72 3300005548 Ga0070665_100179373 Ga0070665_1001793732 516
73 3300005614 Ga0068856_100000280 Ga0068856_10000028036 516
74 3300006175 Ga0070712_100000184 Ga0070712_10000018432 516
75 3300007076 Ga0075435_100037218 Ga0075435_1000372182 516
76 3300025915 Ga0207693_10020777 Ga0207693_100207775 516
77 3300025928 Ga0207700_10000020 Ga0207700_100000204 516
78 3300025929 Ga0207664_10027161 Ga0207664_100271611 516
79 3300026078 Ga0207702_10000030 Ga0207702_1000003093 516
80 3300035724 Ga0373933_0039667 Ga0373933_0039667_755_2491 516
81 3300036401 Ga0373937_0057065 Ga0373937_0057065_750_2486 516
82 3300046462 Ga0495651_0010522 Ga0495651_0010522_94_1908 516
83 3300046543 Ga0495645_0050813 Ga0495645_0050813_10_1824 516
84 3300046675 Ga0495657_0062535 Ga0495657_0062535_241_2055 516
85 3300047322 Ga0495680_0027096 Ga0495680_0027096_2124_3938 516
86 3300049581 Ga0501047_0002943 Ga0501047_0002943_12032_13774 516
87 3300049589 Ga0501073_0006683 Ga0501073_0006683_1982_3724 516
88 3300050513 nmdc:mga0rr50_17580_c1 nmdc:mga0rr50_17580_c1_1311_3059 516
89 3300054114 Ga0501084_0015332 Ga0501084_0015332_2565_4307 516
90 3300009177 Ga0105248_10000001 Ga0105248_100000011791 517
91 3300014325 Ga0163163_10040542 Ga0163163_100405423 517
92 3300025913 Ga0207695_10090798 Ga0207695_100907982 517
93 3300025941 Ga0207711_10000001 Ga0207711_1000000181 517
94 3300037068 Ga0373925_0025075 Ga0373925_0025075_1519_3333 517
95 3300049823 Ga0501044_0188343 Ga0501044_0188343_281_2017 517
96 3300005341 Ga0070691_10041043 Ga0070691_100410431 518
97 3300005439 Ga0070711_100036579 Ga0070711_1000365792 518
98 3300005530 Ga0070679_100034208 Ga0070679_1000342084 518
99 3300005842 Ga0068858_100007195 Ga0068858_1000071955 518
100 3300013307 Ga0157372_10022772 Ga0157372_100227725 518
101 3300014968 Ga0157379_10000304 Ga0157379_1000030428 518
102 3300014968 Ga0157379_10023039 Ga0157379_100230392 518
103 3300025921 Ga0207652_10124078 Ga0207652_101240781 518
104 3300031241 Ga0265325_10000027 Ga0265325_1000002730 518
105 3300031249 Ga0265339_10001651 Ga0265339_100016515 518
106 3300031344 Ga0265316_10001218 Ga0265316_1000121823 518
107 3300031595 Ga0265313_10000335 Ga0265313_1000033526 518
108 3300035724 Ga0373933_0025081 Ga0373933_0025081_1481_3274 518
109 3300036401 Ga0373937_0000338 Ga0373937_0000338_18541_20334 518
110 3300036401 Ga0373937_0014826 Ga0373937_0014826_4057_5871 518
111 3300037068 Ga0373925_0133489 Ga0373925_0133489_89_1903 518
112 3300047472 Ga0495686_0000013 Ga0495686_0000013_435990_437942 518
113 3300049581 Ga0501047_0043923 Ga0501047_0043923_510_2246 518
114 3300049586 Ga0501070_0000248 Ga0501070_0000248_45357_47093 518
115 3300049742 Ga0501080_0021588 Ga0501080_0021588_3604_5340 518
116 3300049822 Ga0501035_0011786 Ga0501035_0011786_2697_4433 518
117 3300049823 Ga0501044_0000644 Ga0501044_0000644_12278_14014 518
118 3300049823 Ga0501044_0077378 Ga0501044_0077378_45_1823 518
119 3300005841 Ga0068863_100066684 Ga0068863_1000666842 520
120 3300005981 Ga0081538_10015024 Ga0081538_100150245 520
121 3300005981 Ga0081538_10028741 Ga0081538_100287415 520
122 3300009553 Ga0105249_10089212 Ga0105249_100892122 520
123 3300021384 Ga0213876_10000322 Ga0213876_1000032236 520
124 3300026088 Ga0207641_10055315 Ga0207641_100553152 520
125 3300039437 Ga0436365_0173471 Ga0436365_0173471_101510_103339 520
126 3300031456 Ga0307513_10000077 Ga0307513_1000007740 521
127 3300037853 Ga0436364_0482536 Ga0436364_0482536_582_2402 521
128 3300035119 Ga0373956_0036538 Ga0373956_0036538_314_2077 522
129 3300035120 Ga0373957_0016223 Ga0373957_0016223_198_1961 522
130 3300035172 Ga0373955_0013212 Ga0373955_0013212_1032_2795 522
131 3300035410 Ga0373924_0015406 Ga0373924_0015406_705_2468 522
132 3300035724 Ga0373933_0007268 Ga0373933_0007268_4127_5890 522
133 3300036401 Ga0373937_0026504 Ga0373937_0026504_169_1932 522
134 3300039438 Ga0436360_0824701 Ga0436360_0824701_1618_3405 522
135 3300046559 Ga0495667_0011372 Ga0495667_0011372_875_2638 522
136 3300053084 Ga0495595_0024861 Ga0495595_0024861_738_2501 522
137 3300006358 Ga0068871_100018880 Ga0068871_1000188804 523
138 3300027378 Ga0209981_1001555 Ga0209981_10015553 525
139 3300031251 Ga0265327_10002651 Ga0265327_1000265118 525
140 3300005353 Ga0070669_100002041 Ga0070669_1000020413 526
141 3300005617 Ga0068859_100000930 Ga0068859_10000093021 526
142 3300005841 Ga0068863_100001315 Ga0068863_10000131516 526
143 3300006931 Ga0097620_100000930 Ga0097620_10000093021 526
144 3300009177 Ga0105248_10003956 Ga0105248_100039568 526
145 3300013306 Ga0163162_10079772 Ga0163162_100797723 526
146 3300014325 Ga0163163_10002788 Ga0163163_100027886 526
147 3300014968 Ga0157379_10039266 Ga0157379_100392665 526
148 3300025923 Ga0207681_10003889 Ga0207681_100038895 526
149 3300025925 Ga0207650_10096504 Ga0207650_100965042 526
150 3300025931 Ga0207644_10000907 Ga0207644_1000090711 526
151 3300025972 Ga0207668_10031358 Ga0207668_100313583 526
152 3300026088 Ga0207641_10007794 Ga0207641_100077945 526
153 3300005548 Ga0070665_100004749 Ga0070665_1000047491 527
154 3300021388 Ga0213875_10005753 Ga0213875_100057537 527
155 3300037853 Ga0436364_1273206 Ga0436364_1273206_39715_41574 527
156 3300039437 Ga0436365_0881263 Ga0436365_0881263_67_1851 527
157 3300028379 Ga0268266_10000656 Ga0268266_1000065641 528
158 3300039437 Ga0436365_1114398 Ga0436365_1114398_1114_3009 528
159 3300031456 Ga0307513_10003700 Ga0307513_1000370026 529
160 3300039447 Ga0436361_0754707 Ga0436361_0754707_2397_4256 530
161 3300046684 Ga0495669_0000044 Ga0495669_0000044_19003_20817 531
162 3300053080 Ga0500635_0000133 Ga0500635_0000133_37148_38983 531
163 3300025941 Ga0207711_10001710 Ga0207711_100017105 532
164 3300048924 Ga0496121_0000035 Ga0496121_0000035_90391_92208 532
165 3300048922 Ga0496119_0005374 Ga0496119_0005374_724_2712 533
166 3300005458 Ga0070681_10019999 Ga0070681_100199998 534
167 3300005563 Ga0068855_100068121 Ga0068855_1000681212 534
168 3300025913 Ga0207695_10007614 Ga0207695_100076144 534
169 iso_pu_bacteria 2643221614 2644088035 534
170 iso_pu_bacteria 2643221661 2644344078 534
171 iso_pu_bacteria 2643221666 2644367392 534
172 iso_pu_bacteria 643348555 643392418 535
173 3300009093 Ga0105240_10043684 Ga0105240_100436844 536
174 iso_pu_bacteria 2643221598 2644001554 536
175 3300005367 Ga0070667_100012748 Ga0070667_1000127488 537
176 3300049570 Ga0501033_0027870 Ga0501033_0027870_362_2164 537
177 3300049823 Ga0501044_0003542 Ga0501044_0003542_4378_6180 537
178 3300005336 Ga0070680_100003915 Ga0070680_1000039154 538
179 3300009093 Ga0105240_10201211 Ga0105240_102012112 538
180 3300025913 Ga0207695_10000572 Ga0207695_100005726 538
181 3300025917 Ga0207660_10007574 Ga0207660_100075743 538
182 3300005336 Ga0070680_100001145 Ga0070680_10000114514 540
183 3300005458 Ga0070681_10067137 Ga0070681_100671371 540
184 3300005539 Ga0068853_100002965 Ga0068853_1000029657 540
185 3300005563 Ga0068855_100048405 Ga0068855_1000484054 540
186 3300025909 Ga0207705_10000600 Ga0207705_1000060012 540
187 3300025917 Ga0207660_10004147 Ga0207660_100041476 540
188 3300025919 Ga0207657_10000381 Ga0207657_100003817 540
189 3300025921 Ga0207652_10001952 Ga0207652_1000195216 540
190 3300025949 Ga0207667_10037590 Ga0207667_100375905 540
191 3300025949 Ga0207667_10051412 Ga0207667_100514123 540
192 3300037471 Ga0395905_0006903 Ga0395905_0006903_783_2582 540
193 3300038443 Ga0395901_0041811 Ga0395901_0041811_226_2100 540
194 3300025972 Ga0207668_10000010 Ga0207668_1000001042 541
195 3300035695 Ga0373927_0000472 Ga0373927_0000472_16658_18457 541
196 3300037068 Ga0373925_0000003 Ga0373925_0000003_36082_37881 541
197 3300053108 Ga0500562_005252 Ga0500562_005252_421_2244 541
198 3300005548 Ga0070665_100000837 Ga0070665_1000008371 542
199 3300009177 Ga0105248_10000517 Ga0105248_1000051744 542
200 3300025912 Ga0207707_10123261 Ga0207707_101232611 542
201 3300025913 Ga0207695_10013848 Ga0207695_100138486 542
202 3300025941 Ga0207711_10002365 Ga0207711_1000236519 542
203 3300028379 Ga0268266_10000003 Ga0268266_10000003879 542
204 3300048918 Ga0496115_0003595 Ga0496115_0003595_5922_7727 542
205 3300005331 Ga0070670_100000007 Ga0070670_100000007180 543
206 3300005347 Ga0070668_100000835 Ga0070668_10000083516 543
207 3300005367 Ga0070667_100000155 Ga0070667_10000015555 543
208 3300005548 Ga0070665_100001961 Ga0070665_10000196114 543
209 3300005618 Ga0068864_100000128 Ga0068864_10000012826 543
210 3300005841 Ga0068863_100000360 Ga0068863_10000036028 543
211 3300005844 Ga0068862_100001031 Ga0068862_10000103113 543
212 3300009553 Ga0105249_10001758 Ga0105249_1000175814 543
213 3300025925 Ga0207650_10000030 Ga0207650_10000030172 543
214 3300025961 Ga0207712_10000758 Ga0207712_1000075814 543
215 3300025972 Ga0207668_10000108 Ga0207668_1000010855 543
216 3300025986 Ga0207658_10000265 Ga0207658_1000026527 543
217 3300026088 Ga0207641_10001651 Ga0207641_100016516 543
218 3300026095 Ga0207676_10000183 Ga0207676_1000018328 543
219 3300028379 Ga0268266_10005366 Ga0268266_100053662 543
220 3300028380 Ga0268265_10001171 Ga0268265_100011714 543
221 3300048905 Ga0496102_0092119 Ga0496102_0092119_600_2408 543
222 3300006881 Ga0068865_100006112 Ga0068865_1000061126 544
223 3300025938 Ga0207704_10019772 Ga0207704_100197722 544
224 3300028786 Ga0307517_10001402 Ga0307517_1000140236 544
225 3300031456 Ga0307513_10010991 Ga0307513_1001099113 544
226 3300005618 Ga0068864_100000067 Ga0068864_10000006788 545
227 3300005841 Ga0068863_100000237 Ga0068863_10000023726 545
228 3300005842 Ga0068858_100000020 Ga0068858_100000020136 545
229 3300005843 Ga0068860_100000047 Ga0068860_100000047180 545
230 3300009092 Ga0105250_10014499 Ga0105250_100144993 545
231 3300025711 Ga0207696_1015560 Ga0207696_10155602 545
232 3300026035 Ga0207703_10000082 Ga0207703_1000008276 545
233 3300026088 Ga0207641_10000007 Ga0207641_1000000726 545
234 3300026095 Ga0207676_10000241 Ga0207676_1000024142 545
235 3300028381 Ga0268264_10000125 Ga0268264_1000012529 545
236 3300005366 Ga0070659_100000209 Ga0070659_10000020918 546
237 3300025250 Ga0209026_1001197 Ga0209026_10011979 546
238 3300025932 Ga0207690_10000116 Ga0207690_1000011631 546
239 3300003791 Ga0055530_10007826 Ga0055530_100078261 547
240 3300003794 Ga0055531_10003745 Ga0055531_100037457 547
241 3300005262 Ga0065165_1001513 Ga0065165_100151323 547
242 3300025297 Ga0209758_1000894 Ga0209758_100089425 547
243 3300025298 Ga0209050_1000173 Ga0209050_100017353 547
244 3300025304 Ga0209257_1000196 Ga0209257_100019653 547
245 3300025304 Ga0209257_1004068 Ga0209257_10040683 547
246 3300047472 Ga0495686_0004549 Ga0495686_0004549_178_1995 547

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12169

DNA_pol3_gamma3

DNA polymerase III subunits gamma and tau domain III

293

435

0.99

PF12362

DUF3646

DNA polymerase III gamma and tau subunits C terminal

526

638

0.97

PF22608

DNAX_ATPase_lid

DNA polymerase III clamp loader subunit, ATPase lid domain

237

285

0.95

PF13177

DNA_pol3_delta2

DNA polymerase III, delta subunit

70

234

0.94

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

91

233

0.76

PF13401

AAA_22

AAA domain

86

217

0.64

Feature Viewer

pLDDT pTM Quality
79.08 0.45 Low
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Predicted Structure (AlphaFold2)

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