F358418

General Info

Members Datasets Scaffolds Average Seq Length
246 175 243 407

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0019044|Ga0495638_0019044_1354_2715
Length 453
Sequence MQPSELDGFPRGLQAIFLKRFTLYSSTVRRRGPHMIINEILRGLLGVVAFIGLGWLLSENRRAFPVRPVLVGLACQIGLAVLLTRVPAITADFAAATHVVDAIQSAARAGSSFMFGYLGGGRAPFSIGDPGATFIFAFQALPAILLVGALSALLWHWRILIWIVRGAAWAFGKLFGISGPVGVSTSACVFLGMVEAPLLVKPFLPRLSRGELFIIMVDGLSVIGGSMMIVLGSLIAAKMPNAFSHLLIASLISTPMAIGMARLIIPTPDSDIHEPIVLTSPYRSSLEAMTFGTLDAVKMVLNIAGLLIVFVSLIALINMGLAALPHAGPPLTLGFLLGKLLTPIVWLTGTPIGDLQTVGSLLGTKVAANEVVAYSDMMALPAGALQPKSLLILTYALGSFGNVGSVAILIGSLSSMAPDKVGEVVELGFKALAAAFLTTCLTATIMGLLSALP

Samples

Sample ID Description Type Environment
1 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
2 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
3 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
90 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
91 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
96 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
97 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
98 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
99 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
100 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
105 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
106 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
110 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
111 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
112 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
113 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
114 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
115 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
116 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
117 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
122 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
123 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
124 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
127 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
128 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
129 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
130 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
131 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
132 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
133 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
134 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
135 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
136 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
137 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
140 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
150 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
165 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
166 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
167 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
168 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
169 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
170 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
171 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
172 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
173 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
174 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
175 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.78
Metatranscriptomes 0
Isolates 1.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.91
Nodule 0
Rhizoplane 3.25
Rhizosphere 80.49
Stem 0
Stem Tuber 0
Unclassified 9.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000321 3300003203 Bacteria 21634
2 Ga0055536_1000231 3300003781 Bacteria 44828
3 Ga0055531_10000834 3300003794 Bacteria 25453
4 Ga0065707_10082393 3300005295 Bacteria 15726
5 Ga0070680_100015659 3300005336 Bacteria 5951
6 Ga0070689_100036147 3300005340 Bacteria 3777
7 Ga0070691_10001492 3300005341 Bacteria 10044
8 Ga0070691_10037478 3300005341 Bacteria 2288
9 Ga0070675_100141872 3300005354 Bacteria 2054
10 Ga0070688_100052768 3300005365 Bacteria 2541
11 Ga0070703_10004243 3300005406 Bacteria 4034
12 Ga0070709_10000828 3300005434 Bacteria 17298
13 Ga0070709_10095673 3300005434 Bacteria 1968
14 Ga0070714_100018859 3300005435 Bacteria 5612
15 Ga0070713_100000098 3300005436 Bacteria 55237
16 Ga0070713_100025151 3300005436 Bacteria 4650
17 Ga0070713_100329990 3300005436 Bacteria 1411
18 Ga0070710_10025890 3300005437 Bacteria 3110
19 Ga0070710_10058908 3300005437 Bacteria 2179
20 Ga0070701_10030892 3300005438 Bacteria 2654
21 Ga0070711_100060284 3300005439 Bacteria 2637
22 Ga0070705_100000203 3300005440 Bacteria 34997
23 Ga0070700_100002069 3300005441 Bacteria 10197
24 Ga0070694_100000072 3300005444 Bacteria 48206
25 Ga0070699_100000773 3300005518 Bacteria 29529
26 Ga0070684_100143621 3300005535 Bacteria 2159
27 Ga0070697_100055390 3300005536 Bacteria 3224
28 Ga0068853_100019518 3300005539 Bacteria 5621
29 Ga0070696_100000179 3300005546 Bacteria 36669
30 Ga0070693_100045496 3300005547 Bacteria 2488
31 Ga0070665_100017383 3300005548 Bacteria 7218
32 Ga0070704_100001741 3300005549 Bacteria 11880
33 Ga0068855_100011357 3300005563 Bacteria 10753
34 Ga0068855_100040453 3300005563 Bacteria 5533
35 Ga0068857_100001432 3300005577 Bacteria 18896
36 Ga0068857_100007848 3300005577 Bacteria 9205
37 Ga0068854_100024827 3300005578 Bacteria 4108
38 Ga0068856_100000185 3300005614 Bacteria 64973
39 Ga0068856_100034508 3300005614 Bacteria 4955
40 Ga0070702_100012734 3300005615 Bacteria 4228
41 Ga0068852_100032840 3300005616 Bacteria 4302
42 Ga0068864_100027534 3300005618 Bacteria 4802
43 Ga0068860_100004911 3300005843 Bacteria 13625
44 Ga0068862_100002769 3300005844 Bacteria 15360
45 Ga0081540_1009900 3300005983 Bacteria 6506
46 Ga0081539_10001144 3300005985 Bacteria 48051
47 Ga0070712_100001142 3300006175 Bacteria 16021
48 Ga0070712_100008410 3300006175 Bacteria 6491
49 Ga0070712_100009436 3300006175 Bacteria 6149
50 Ga0070712_100048246 3300006175 Bacteria 2951
51 Ga0070712_100055991 3300006175 Bacteria 2764
52 Ga0075366_10035808 3300006195 Bacteria 2926
53 Ga0075436_100000092 3300006914 Bacteria 52229
54 Ga0075435_100012482 3300007076 Bacteria 6295
55 Ga0075435_100071729 3300007076 Bacteria 2829
56 Ga0105240_10007346 3300009093 Bacteria 16029
57 Ga0105240_10017405 3300009093 Bacteria 9687
58 Ga0105240_10114717 3300009093 Bacteria 3254
59 Ga0114129_10015821 3300009147 Bacteria 10726
60 Ga0105243_10030038 3300009148 Bacteria 4182
61 Ga0105248_10035459 3300009177 Bacteria 5580
62 Ga0105237_10003476 3300009545 Bacteria 18677
63 Ga0105238_10036416 3300009551 Bacteria 5002
64 Ga0105238_10206309 3300009551 Bacteria 1941
65 Ga0105249_10001998 3300009553 Bacteria 17713
66 Ga0105239_10006797 3300010375 Bacteria 13202
67 Ga0105239_10087205 3300010375 Bacteria 3440
68 Ga0157373_10001011 3300013100 Bacteria 21712
69 Ga0157370_10006270 3300013104 Bacteria 13166
70 Ga0157369_10015258 3300013105 Bacteria 8668
71 Ga0157369_10058804 3300013105 Bacteria 4146
72 Ga0157374_10110610 3300013296 Bacteria 2642
73 Ga0157374_10146065 3300013296 Bacteria 2297
74 Ga0157372_10201613 3300013307 Bacteria 2305
75 Ga0157375_10102194 3300013308 Bacteria 2951
76 Ga0163163_10225904 3300014325 Bacteria 1921
77 Ga0157379_10001951 3300014968 Bacteria 17074
78 Ga0157379_10016185 3300014968 Bacteria 6561
79 Ga0157379_10041731 3300014968 Bacteria 4095
80 Ga0209676_1000151 3300025292 Bacteria 167307
81 Ga0209050_1000751 3300025298 Bacteria 46633
82 Ga0209257_1000140 3300025304 Bacteria 201515
83 Ga0207653_10000547 3300025885 Bacteria 13907
84 Ga0207692_10062796 3300025898 Bacteria 1929
85 Ga0207692_10083588 3300025898 Bacteria 1713
86 Ga0207699_10000212 3300025906 Bacteria 34595
87 Ga0207699_10063707 3300025906 Bacteria 2228
88 Ga0207643_10058790 3300025908 Bacteria 2192
89 Ga0207707_10012130 3300025912 Bacteria 7491
90 Ga0207695_10003426 3300025913 Bacteria 22378
91 Ga0207695_10021070 3300025913 Bacteria 7445
92 Ga0207695_10024424 3300025913 Bacteria 6802
93 Ga0207695_10038440 3300025913 Bacteria 5152
94 Ga0207671_10014959 3300025914 Bacteria 6099
95 Ga0207693_10000357 3300025915 Bacteria 41920
96 Ga0207693_10002260 3300025915 Bacteria 16762
97 Ga0207693_10005569 3300025915 Bacteria 10479
98 Ga0207693_10005961 3300025915 Bacteria 10108
99 Ga0207663_10090791 3300025916 Bacteria 2026
100 Ga0207663_10188795 3300025916 Bacteria 1478
101 Ga0207660_10007314 3300025917 Bacteria 7145
102 Ga0207660_10082486 3300025917 Bacteria 2366
103 Ga0207694_10141665 3300025924 Bacteria 1934
104 Ga0207700_10000010 3300025928 Bacteria 298473
105 Ga0207700_10136899 3300025928 Bacteria 2007
106 Ga0207670_10018485 3300025936 Bacteria 4237
107 Ga0207667_10045090 3300025949 Bacteria 4670
108 Ga0207712_10023555 3300025961 Bacteria 4065
109 Ga0207640_10064723 3300025981 Bacteria 2436
110 Ga0207708_10000931 3300026075 Bacteria 21924
111 Ga0207702_10000174 3300026078 Bacteria 77455
112 Ga0207702_10001287 3300026078 Bacteria 25151
113 Ga0207676_10029978 3300026095 Bacteria 4078
114 Ga0207674_10000002 3300026116 Bacteria 279738
115 Ga0207674_10000874 3300026116 Bacteria 39441
116 Ga0207674_10185128 3300026116 Bacteria 2033
117 Ga0207675_100028998 3300026118 Bacteria 5157
118 Ga0207675_100180497 3300026118 Bacteria 2021
119 Ga0268266_10009410 3300028379 Bacteria 8606
120 Ga0268265_10002790 3300028380 Bacteria 12874
121 Ga0268264_10002209 3300028381 Bacteria 17271
122 Ga0265338_10076004 3300028800 Bacteria 2847
123 Ga0265325_10000161 3300031241 Bacteria 47245
124 Ga0265339_10001879 3300031249 Bacteria 15422
125 Ga0265327_10000676 3300031251 Bacteria 54869
126 Ga0265313_10001891 3300031595 Bacteria 19016
127 Ga0265314_10035589 3300031711 Bacteria 3628
128 Ga0316576_10069616 3300031727 Bacteria 2595
129 Ga0316576_10086190 3300031727 Bacteria 2335
130 Ga0316576_10159652 3300031727 Unclassified 1700
131 Ga0316578_10036519 3300031728 Bacteria 2827
132 Ga0316578_10086559 3300031728 Bacteria 1868
133 Ga0316578_10134072 3300031728 Bacteria 1491
134 Ga0316577_10058804 3300031733 Bacteria 2146
135 Ga0316585_10004720 3300032137 Bacteria 3816
136 Ga0373956_0039616 3300035119 Bacteria 2089
137 Ga0373956_0040510 3300035119 Bacteria 2066
138 Ga0316574_0026477 3300035398 Bacteria 3488
139 Ga0316574_0029642 3300035398 Bacteria 3307
140 Ga0316574_0104356 3300035398 Unclassified 1815
141 Ga0373931_0032971 3300035691 Bacteria 2683
142 Ga0373935_0066116 3300035692 Bacteria 2322
143 Ga0373937_0023042 3300036401 Bacteria 5602
144 Ga0373937_0267123 3300036401 Bacteria 1614
145 Ga0316582_0081271 3300036647 Bacteria 2117
146 Ga0316582_0113161 3300036647 Bacteria 1808
147 Ga0316584_0023555 3300036712 Bacteria 4498
148 Ga0316584_0036773 3300036712 Bacteria 3634
149 Ga0316584_0062131 3300036712 Bacteria 2798
150 Ga0316584_0084150 3300036712 Bacteria 2382
151 Ga0373925_0043233 3300037068 Bacteria 3343
152 Ga0395900_0298541 3300037418 Bacteria 1598
153 Ga0395898_0105420 3300037466 Bacteria 2703
154 Ga0316581_0014086 3300037588 Bacteria 2273
155 Ga0316581_0042134 3300037588 Bacteria 1393
156 Ga0436364_0902930 3300037853 Bacteria 13893
157 Ga0436364_1110517 3300037853 Bacteria 2674
158 Ga0400484_23462 3300038725 Bacteria 11887
159 Ga0400484_30896 3300038725 Bacteria 6108
160 Ga0400490_08399 3300038726 Bacteria 5874
161 Ga0400490_42223 3300038726 Bacteria 7272
162 Ga0400490_44167 3300038726 Bacteria 16795
163 Ga0400488_02665 3300038741 Bacteria 6539
164 Ga0400488_61086 3300038741 Bacteria 2648
165 Ga0400486_12590 3300038742 Bacteria 15671
166 Ga0400483_154914 3300039062 Bacteria 2153
167 Ga0400489_77201 3300039093 Bacteria 66002
168 Ga0400487_34784 3300039110 Bacteria 18793
169 Ga0436365_1834370 3300039437 Bacteria 1837
170 Ga0436360_0456313 3300039438 Bacteria 2125
171 Ga0436361_0025205 3300039447 Bacteria 5639
172 Ga0436361_0424082 3300039447 Bacteria 2996
173 Ga0436361_0860001 3300039447 Bacteria 1696
174 Ga0436361_1180414 3300039447 Bacteria 13143
175 Ga0436363_0584452 3300039450 Bacteria 3471
176 Ga0436363_1491674 3300039450 Bacteria 2316
177 Ga0436362_0959299 3300039453 Bacteria 1854
178 Ga0451577_0269904 3300042876 Unclassified 1541
179 Ga0453683_0007380 3300044673 Bacteria 7465
180 Ga0451576_0000552 3300045051 Bacteria 80314
181 Ga0451576_0001683 3300045051 Bacteria 36623
182 Ga0451576_0232431 3300045051 Bacteria 1926
183 Ga0495590_0004483 3300046457 Bacteria 5633
184 Ga0495638_0000313 3300046460 Bacteria 62599
185 Ga0495638_0000483 3300046460 Bacteria 47826
186 Ga0495638_0019044 3300046460 Bacteria 4545
187 Ga0495651_0075051 3300046462 Unclassified 2564
188 Ga0495650_0000024 3300046471 Bacteria 496674
189 Ga0495650_0020427 3300046471 Bacteria 3230
190 Ga0495583_0000001 3300046506 Bacteria 811973
191 Ga0495610_0000165 3300046512 Bacteria 73467
192 Ga0495620_0014287 3300046515 Bacteria 4039
193 Ga0495631_0004764 3300046518 Bacteria 7163
194 Ga0495648_0023619 3300046524 Bacteria 4205
195 Ga0495654_0000026 3300046530 Bacteria 234940
196 Ga0495668_0000047 3300046616 Bacteria 224140
197 Ga0495625_0002376 3300046660 Bacteria 20476
198 Ga0495625_0009869 3300046660 Bacteria 7940
199 Ga0495674_0141968 3300047319 Unclassified 2018
200 Ga0495677_0036505 3300047445 Bacteria 1795
201 Ga0495673_0000321 3300047469 Bacteria 61858
202 Ga0495686_0000084 3300047472 Bacteria 198253
203 Ga0495686_0000284 3300047472 Bacteria 89023
204 Ga0495686_0072114 3300047472 Bacteria 2124
205 Ga0496101_0065554 3300048904 Bacteria 2648
206 Ga0496102_0001824 3300048905 Bacteria 18382
207 Ga0496104_0067121 3300048907 Bacteria 3407
208 Ga0496106_0007686 3300048909 Bacteria 7972
209 Ga0496106_0029738 3300048909 Bacteria 4073
210 Ga0496106_0173338 3300048909 Bacteria 1711
211 Ga0496107_0097192 3300048910 Bacteria 2156
212 Ga0496111_0035901 3300048914 Bacteria 3544
213 Ga0496118_0031829 3300048921 Bacteria 4363
214 Ga0496122_0001226 3300048925 Bacteria 43394
215 Ga0496123_0002854 3300048926 Bacteria 20399
216 Ga0496124_0002880 3300048927 Bacteria 21737
217 Ga0496124_0011611 3300048927 Bacteria 8791
218 Ga0496125_0029754 3300048928 Bacteria 4901
219 Ga0496126_0001860 3300048929 Bacteria 30759
220 Ga0501033_0002775 3300049570 Bacteria 14682
221 Ga0501034_0003639 3300049571 Bacteria 17459
222 Ga0501034_0128771 3300049571 Bacteria 2515
223 Ga0501036_0081063 3300049572 Bacteria 2743
224 Ga0501035_0021739 3300049822 Bacteria 5899
225 Ga0501044_0017341 3300049823 Bacteria 7723
226 nmdc:mga0k408_8769_c1 3300050493 Bacteria 5442
227 nmdc:mga05p37_20638_c1 3300050507 Bacteria 7970
228 nmdc:mga09592_55338_c1 3300050508 Bacteria 3353
229 nmdc:mga0qj67_34018_c1 3300050509 Bacteria 3980
230 nmdc:mga06r32_56628_c1 3300050510 Bacteria 3764
231 nmdc:mga0rr50_1687_c1 3300050513 Bacteria 12194
232 nmdc:mga0rr50_41898_c1 3300050513 Bacteria 3340
233 nmdc:mga08x19_139_c1 3300050514 Bacteria 64397
234 nmdc:mga0sz30_1494_c1 3300050516 Bacteria 8334
235 Ga0500578_0000030 3300053086 Bacteria 140063
236 Ga0500643_001871 3300053087 Bacteria 11455
237 Ga0500644_0000189 3300053088 Bacteria 38264
238 Ga0500641_0000585 3300053096 Bacteria 13134
239 Ga0500594_0000087 3300053118 Bacteria 27875
240 Ga0500608_000049 3300053122 Bacteria 54754
241 Ga0500559_0003111 3300053136 Bacteria 8267
242 Ga0500564_000221 3300053138 Bacteria 15836
243 Ga0500622_0000388 3300053156 Bacteria 42506

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005336 Ga0070680_100015659 Ga0070680_1000156597 323
2 3300005536 Ga0070697_100055390 Ga0070697_1000553901 323
3 3300026118 Ga0207675_100180497 Ga0207675_1001804971 323
4 3300047472 Ga0495686_0000084 Ga0495686_0000084_168187_169458 350
5 3300031727 Ga0316576_10159652 Ga0316576_101596522 354
6 3300035398 Ga0316574_0104356 Ga0316574_0104356_431_1711 354
7 3300036712 Ga0316584_0023555 Ga0316584_0023555_2663_3943 354
8 3300048921 Ga0496118_0031829 Ga0496118_0031829_1668_2939 354
9 3300036647 Ga0316582_0081271 Ga0316582_0081271_824_2071 361
10 3300036401 Ga0373937_0023042 Ga0373937_0023042_4424_5560 362
11 3300038741 Ga0400488_02665 Ga0400488_02665_3482_4726 362
12 3300038726 Ga0400490_44167 Ga0400490_44167_2374_3618 364
13 3300031728 Ga0316578_10036519 Ga0316578_100365193 365
14 3300032137 Ga0316585_10004720 Ga0316585_100047202 365
15 3300036647 Ga0316582_0113161 Ga0316582_0113161_510_1760 365
16 3300036712 Ga0316584_0036773 Ga0316584_0036773_1803_3050 365
17 3300036712 Ga0316584_0084150 Ga0316584_0084150_489_1739 365
18 3300037588 Ga0316581_0014086 Ga0316581_0014086_195_1442 365
19 3300037588 Ga0316581_0042134 Ga0316581_0042134_43_1293 365
20 3300009147 Ga0114129_10015821 Ga0114129_100158213 366
21 3300050507 nmdc:mga05p37_20638_c1 nmdc:mga05p37_20638_c1_4278_5555 366
22 3300045051 Ga0451576_0001683 Ga0451576_0001683_13412_14656 367
23 3300046518 Ga0495631_0004764 Ga0495631_0004764_15_1169 368
24 3300038725 Ga0400484_30896 Ga0400484_30896_4601_5845 374
25 3300048909 Ga0496106_0029738 Ga0496106_0029738_1292_2500 374
26 3300009177 Ga0105248_10035459 Ga0105248_100354592 375
27 3300013308 Ga0157375_10102194 Ga0157375_101021942 375
28 3300014325 Ga0163163_10225904 Ga0163163_102259041 375
29 3300049571 Ga0501034_0128771 Ga0501034_0128771_795_2066 377
30 3300005341 Ga0070691_10037478 Ga0070691_100374781 378
31 3300005354 Ga0070675_100141872 Ga0070675_1001418722 378
32 3300005406 Ga0070703_10004243 Ga0070703_100042432 378
33 3300005438 Ga0070701_10030892 Ga0070701_100308922 378
34 3300005440 Ga0070705_100000203 Ga0070705_1000002038 378
35 3300005441 Ga0070700_100002069 Ga0070700_1000020693 378
36 3300005444 Ga0070694_100000072 Ga0070694_10000007211 378
37 3300005518 Ga0070699_100000773 Ga0070699_10000077311 378
38 3300005546 Ga0070696_100000179 Ga0070696_1000001797 378
39 3300005547 Ga0070693_100045496 Ga0070693_1000454961 378
40 3300005549 Ga0070704_100001741 Ga0070704_1000017414 378
41 3300005577 Ga0068857_100007848 Ga0068857_1000078487 378
42 3300005615 Ga0070702_100012734 Ga0070702_1000127343 378
43 3300005618 Ga0068864_100027534 Ga0068864_1000275342 378
44 3300005843 Ga0068860_100004911 Ga0068860_1000049117 378
45 3300005844 Ga0068862_100002769 Ga0068862_10000276912 378
46 3300009148 Ga0105243_10030038 Ga0105243_100300384 378
47 3300009553 Ga0105249_10001998 Ga0105249_100019989 378
48 3300025885 Ga0207653_10000547 Ga0207653_100005475 378
49 3300025908 Ga0207643_10058790 Ga0207643_100587902 378
50 3300025912 Ga0207707_10012130 Ga0207707_100121305 378
51 3300025917 Ga0207660_10007314 Ga0207660_100073146 378
52 3300025961 Ga0207712_10023555 Ga0207712_100235553 378
53 3300026075 Ga0207708_10000931 Ga0207708_100009319 378
54 3300026095 Ga0207676_10029978 Ga0207676_100299782 378
55 3300026116 Ga0207674_10000874 Ga0207674_1000087421 378
56 3300028380 Ga0268265_10002790 Ga0268265_100027908 378
57 3300028381 Ga0268264_10002209 Ga0268264_100022099 378
58 3300048904 Ga0496101_0065554 Ga0496101_0065554_883_2202 378
59 3300048905 Ga0496102_0001824 Ga0496102_0001824_9045_10364 378
60 3300048907 Ga0496104_0067121 Ga0496104_0067121_1024_2343 378
61 3300048909 Ga0496106_0007686 Ga0496106_0007686_5711_7030 378
62 3300007076 Ga0075435_100071729 Ga0075435_1000717292 380
63 3300009093 Ga0105240_10017405 Ga0105240_100174056 383
64 3300009551 Ga0105238_10206309 Ga0105238_102063092 383
65 3300025913 Ga0207695_10021070 Ga0207695_100210703 383
66 3300025924 Ga0207694_10141665 Ga0207694_101416651 383
67 3300031727 Ga0316576_10069616 Ga0316576_100696163 383
68 3300031251 Ga0265327_10000676 Ga0265327_1000067630 385
69 3300038726 Ga0400490_08399 Ga0400490_08399_4045_5286 387
70 3300039062 Ga0400483_154914 Ga0400483_154914_333_1574 387
71 3300039093 Ga0400489_77201 Ga0400489_77201_22603_23850 387
72 3300039110 Ga0400487_34784 Ga0400487_34784_11166_12413 387
73 3300042876 Ga0451577_0269904 Ga0451577_0269904_283_1524 387
74 3300050508 nmdc:mga09592_55338_c1 nmdc:mga09592_55338_c1_1995_3272 387
75 3300050509 nmdc:mga0qj67_34018_c1 nmdc:mga0qj67_34018_c1_2023_3300 387
76 3300050510 nmdc:mga06r32_56628_c1 nmdc:mga06r32_56628_c1_634_1911 387
77 3300005295 Ga0065707_10082393 Ga0065707_1008239312 388
78 3300005340 Ga0070689_100036147 Ga0070689_1000361473 388
79 3300005365 Ga0070688_100052768 Ga0070688_1000527682 388
80 3300025936 Ga0207670_10018485 Ga0207670_100184852 388
81 3300026116 Ga0207674_10185128 Ga0207674_101851282 388
82 3300026118 Ga0207675_100028998 Ga0207675_1000289983 388
83 3300046460 Ga0495638_0000483 Ga0495638_0000483_19174_20448 388
84 3300046660 Ga0495625_0002376 Ga0495625_0002376_9787_11061 388
85 3300048914 Ga0496111_0035901 Ga0496111_0035901_1457_2719 388
86 3300048927 Ga0496124_0002880 Ga0496124_0002880_704_1966 388
87 3300038725 Ga0400484_23462 Ga0400484_23462_1288_2535 389
88 3300039447 Ga0436361_0424082 Ga0436361_0424082_870_2120 389
89 3300047472 Ga0495686_0072114 Ga0495686_0072114_227_1486 389
90 3300035398 Ga0316574_0029642 Ga0316574_0029642_1305_2549 390
91 3300039447 Ga0436361_0025205 Ga0436361_0025205_3062_4300 390
92 3300006175 Ga0070712_100048246 Ga0070712_1000482461 391
93 3300005434 Ga0070709_10095673 Ga0070709_100956731 392
94 3300005435 Ga0070714_100018859 Ga0070714_1000188597 392
95 3300005436 Ga0070713_100025151 Ga0070713_1000251516 392
96 3300005437 Ga0070710_10025890 Ga0070710_100258903 392
97 3300005437 Ga0070710_10058908 Ga0070710_100589083 392
98 3300005439 Ga0070711_100060284 Ga0070711_1000602844 392
99 3300006175 Ga0070712_100009436 Ga0070712_1000094364 392
100 3300006175 Ga0070712_100055991 Ga0070712_1000559912 392
101 3300009545 Ga0105237_10003476 Ga0105237_1000347614 392
102 3300025898 Ga0207692_10083588 Ga0207692_100835882 392
103 3300025915 Ga0207693_10005569 Ga0207693_100055692 392
104 3300025915 Ga0207693_10005961 Ga0207693_100059619 392
105 3300025916 Ga0207663_10188795 Ga0207663_101887951 392
106 3300025928 Ga0207700_10136899 Ga0207700_101368993 392
107 3300039447 Ga0436361_0860001 Ga0436361_0860001_412_1647 392
108 3300039447 Ga0436361_1180414 Ga0436361_1180414_8954_10231 392
109 3300038726 Ga0400490_42223 Ga0400490_42223_280_1539 393
110 3300038741 Ga0400488_61086 Ga0400488_61086_166_1413 393
111 3300031733 Ga0316577_10058804 Ga0316577_100588042 394
112 3300039450 Ga0436363_1491674 Ga0436363_1491674_832_2094 394
113 3300044673 Ga0453683_0007380 Ga0453683_0007380_2108_3373 394
114 3300045051 Ga0451576_0000552 Ga0451576_0000552_31799_33064 394
115 3300050493 nmdc:mga0k408_8769_c1 nmdc:mga0k408_8769_c1_1889_3136 394
116 3300005983 Ga0081540_1009900 Ga0081540_10099004 395
117 3300013296 Ga0157374_10110610 Ga0157374_101106102 395
118 3300031728 Ga0316578_10086559 Ga0316578_100865591 395
119 3300035692 Ga0373935_0066116 Ga0373935_0066116_916_2145 395
120 3300038742 Ga0400486_12590 Ga0400486_12590_660_1907 395
121 3300005548 Ga0070665_100017383 Ga0070665_1000173832 396
122 3300005563 Ga0068855_100040453 Ga0068855_1000404536 396
123 3300009093 Ga0105240_10007346 Ga0105240_1000734617 396
124 3300009551 Ga0105238_10036416 Ga0105238_100364163 396
125 3300010375 Ga0105239_10006797 Ga0105239_1000679710 396
126 3300013105 Ga0157369_10058804 Ga0157369_100588042 396
127 3300014968 Ga0157379_10016185 Ga0157379_100161855 396
128 3300025913 Ga0207695_10003426 Ga0207695_1000342620 396
129 3300025913 Ga0207695_10024424 Ga0207695_100244249 396
130 3300025913 Ga0207695_10038440 Ga0207695_100384403 396
131 3300025917 Ga0207660_10082486 Ga0207660_100824861 396
132 3300025949 Ga0207667_10045090 Ga0207667_100450905 396
133 3300028379 Ga0268266_10009410 Ga0268266_100094102 396
134 3300037068 Ga0373925_0043233 Ga0373925_0043233_141_1379 396
135 3300037418 Ga0395900_0298541 Ga0395900_0298541_37_1290 396
136 3300037466 Ga0395898_0105420 Ga0395898_0105420_189_1442 396
137 3300046460 Ga0495638_0000313 Ga0495638_0000313_18577_19863 396
138 3300048909 Ga0496106_0173338 Ga0496106_0173338_123_1361 396
139 3300031711 Ga0265314_10035589 Ga0265314_100355892 397
140 3300037853 Ga0436364_0902930 Ga0436364_0902930_4999_6225 397
141 iso_pu_bacteria 2884960567 2884962600 397
142 3300005436 Ga0070713_100329990 Ga0070713_1003299902 398
143 3300031728 Ga0316578_10134072 Ga0316578_101340721 398
144 3300035119 Ga0373956_0040510 Ga0373956_0040510_603_1844 398
145 3300036401 Ga0373937_0267123 Ga0373937_0267123_84_1349 398
146 3300046462 Ga0495651_0075051 Ga0495651_0075051_1200_2441 398
147 3300046512 Ga0495610_0000165 Ga0495610_0000165_58195_59457 398
148 3300047319 Ga0495674_0141968 Ga0495674_0141968_518_1759 398
149 3300047445 Ga0495677_0036505 Ga0495677_0036505_43_1305 398
150 3300049570 Ga0501033_0002775 Ga0501033_0002775_5341_6603 398
151 3300049571 Ga0501034_0003639 Ga0501034_0003639_6814_8076 398
152 3300049572 Ga0501036_0081063 Ga0501036_0081063_361_1623 398
153 3300049822 Ga0501035_0021739 Ga0501035_0021739_610_1872 398
154 3300049823 Ga0501044_0017341 Ga0501044_0017341_2104_3366 398
155 3300053087 Ga0500643_001871 Ga0500643_001871_7187_8449 398
156 3300003781 Ga0055536_1000231 Ga0055536_100023111 399
157 3300003794 Ga0055531_10000834 Ga0055531_1000083412 399
158 3300005341 Ga0070691_10001492 Ga0070691_100014923 399
159 3300005434 Ga0070709_10000828 Ga0070709_100008284 399
160 3300005436 Ga0070713_100000098 Ga0070713_10000009817 399
161 3300005535 Ga0070684_100143621 Ga0070684_1001436212 399
162 3300005539 Ga0068853_100019518 Ga0068853_1000195183 399
163 3300005563 Ga0068855_100011357 Ga0068855_1000113578 399
164 3300005577 Ga0068857_100001432 Ga0068857_10000143211 399
165 3300005578 Ga0068854_100024827 Ga0068854_1000248275 399
166 3300005614 Ga0068856_100000185 Ga0068856_10000018527 399
167 3300005614 Ga0068856_100034508 Ga0068856_1000345081 399
168 3300005616 Ga0068852_100032840 Ga0068852_1000328404 399
169 3300006175 Ga0070712_100001142 Ga0070712_1000011424 399
170 3300006175 Ga0070712_100008410 Ga0070712_1000084107 399
171 3300006914 Ga0075436_100000092 Ga0075436_10000009213 399
172 3300007076 Ga0075435_100012482 Ga0075435_1000124821 399
173 3300009093 Ga0105240_10114717 Ga0105240_101147173 399
174 3300010375 Ga0105239_10087205 Ga0105239_100872053 399
175 3300013100 Ga0157373_10001011 Ga0157373_1000101114 399
176 3300013104 Ga0157370_10006270 Ga0157370_100062701 399
177 3300013105 Ga0157369_10015258 Ga0157369_100152584 399
178 3300013296 Ga0157374_10146065 Ga0157374_101460651 399
179 3300013307 Ga0157372_10201613 Ga0157372_102016132 399
180 3300014968 Ga0157379_10001951 Ga0157379_100019518 399
181 3300014968 Ga0157379_10041731 Ga0157379_100417312 399
182 3300025292 Ga0209676_1000151 Ga0209676_1000151143 399
183 3300025298 Ga0209050_1000751 Ga0209050_100075111 399
184 3300025304 Ga0209257_1000140 Ga0209257_1000140132 399
185 3300025898 Ga0207692_10062796 Ga0207692_100627962 399
186 3300025906 Ga0207699_10000212 Ga0207699_1000021217 399
187 3300025906 Ga0207699_10063707 Ga0207699_100637072 399
188 3300025914 Ga0207671_10014959 Ga0207671_100149595 399
189 3300025915 Ga0207693_10000357 Ga0207693_1000035711 399
190 3300025915 Ga0207693_10002260 Ga0207693_1000226015 399
191 3300025916 Ga0207663_10090791 Ga0207663_100907912 399
192 3300025928 Ga0207700_10000010 Ga0207700_1000001013 399
193 3300025981 Ga0207640_10064723 Ga0207640_100647232 399
194 3300026078 Ga0207702_10000174 Ga0207702_1000017436 399
195 3300026078 Ga0207702_10001287 Ga0207702_100012878 399
196 3300026116 Ga0207674_10000002 Ga0207674_100000029 399
197 3300028800 Ga0265338_10076004 Ga0265338_100760042 399
198 3300031241 Ga0265325_10000161 Ga0265325_1000016137 399
199 3300031249 Ga0265339_10001879 Ga0265339_100018795 399
200 3300031595 Ga0265313_10001891 Ga0265313_1000189111 399
201 3300035119 Ga0373956_0039616 Ga0373956_0039616_691_1947 399
202 3300035691 Ga0373931_0032971 Ga0373931_0032971_984_2240 399
203 3300039453 Ga0436362_0959299 Ga0436362_0959299_314_1603 399
204 3300045051 Ga0451576_0232431 Ga0451576_0232431_507_1784 399
205 3300046471 Ga0495650_0000024 Ga0495650_0000024_475578_476831 399
206 3300046515 Ga0495620_0014287 Ga0495620_0014287_2362_3615 399
207 3300046524 Ga0495648_0023619 Ga0495648_0023619_452_1705 399
208 3300046530 Ga0495654_0000026 Ga0495654_0000026_213889_215142 399
209 3300046616 Ga0495668_0000047 Ga0495668_0000047_124837_126090 399
210 3300046660 Ga0495625_0009869 Ga0495625_0009869_391_1644 399
211 3300048910 Ga0496107_0097192 Ga0496107_0097192_393_1670 399
212 3300048928 Ga0496125_0029754 Ga0496125_0029754_3027_4280 399
213 3300048929 Ga0496126_0001860 Ga0496126_0001860_17686_18939 399
214 3300050513 nmdc:mga0rr50_1687_c1 nmdc:mga0rr50_1687_c1_9599_10876 399
215 3300050513 nmdc:mga0rr50_41898_c1 nmdc:mga0rr50_41898_c1_375_1652 399
216 3300050514 nmdc:mga08x19_139_c1 nmdc:mga08x19_139_c1_13515_14792 399
217 3300053122 Ga0500608_000049 Ga0500608_000049_43646_44899 399
218 3300053136 Ga0500559_0003111 Ga0500559_0003111_6815_8068 399
219 iso_pu_bacteria 2582581279 2585148359 399
220 iso_pu_bacteria 2891088606 2891090727 399
221 3300031727 Ga0316576_10086190 Ga0316576_100861902 400
222 3300035398 Ga0316574_0026477 Ga0316574_0026477_1041_2288 400
223 3300036712 Ga0316584_0062131 Ga0316584_0062131_215_1462 400
224 3300037853 Ga0436364_1110517 Ga0436364_1110517_772_2019 400
225 3300039437 Ga0436365_1834370 Ga0436365_1834370_373_1620 400
226 3300039438 Ga0436360_0456313 Ga0436360_0456313_440_1693 400
227 3300039450 Ga0436363_0584452 Ga0436363_0584452_37_1284 400
228 3300046457 Ga0495590_0004483 Ga0495590_0004483_923_2182 400
229 3300046460 Ga0495638_0019044 Ga0495638_0019044_1354_2715 400
230 3300046471 Ga0495650_0020427 Ga0495650_0020427_547_1821 400
231 3300046506 Ga0495583_0000001 Ga0495583_0000001_175182_176444 400
232 3300047472 Ga0495686_0000284 Ga0495686_0000284_87236_88495 400
233 3300048927 Ga0496124_0011611 Ga0496124_0011611_537_1793 400
234 3300050516 nmdc:mga0sz30_1494_c1 nmdc:mga0sz30_1494_c1_5123_6379 400
235 3300053086 Ga0500578_0000030 Ga0500578_0000030_23785_25044 400
236 3300053118 Ga0500594_0000087 Ga0500594_0000087_8010_9269 400
237 3300053156 Ga0500622_0000388 Ga0500622_0000388_20534_21808 400
238 3300047469 Ga0495673_0000321 Ga0495673_0000321_10251_11525 402
239 3300048925 Ga0496122_0001226 Ga0496122_0001226_27540_28802 402
240 3300048926 Ga0496123_0002854 Ga0496123_0002854_16650_17912 402
241 3300053088 Ga0500644_0000189 Ga0500644_0000189_10114_11388 402
242 3300053096 Ga0500641_0000585 Ga0500641_0000585_3496_4767 402
243 3300053138 Ga0500564_000221 Ga0500564_000221_10309_11583 402
244 3300006195 Ga0075366_10035808 Ga0075366_100358083 403
245 3300003203 JGI25406J46586_10000321 JGI25406J46586_1000032111 406
246 3300005985 Ga0081539_10001144 Ga0081539_1000114431 406

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01773

Nucleos_tra2_N

Na+ dependent nucleoside transporter N-terminus

45

118

0.99

PF07662

Nucleos_tra2_C

Na+ dependent nucleoside transporter C-terminus

245

447

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5l26-assembly1.cif.gz_C structure of cntnw in an inward-facing substrate-bound state 0.8922 6 402
5l2a-assembly1.cif.gz_A structure of cntnw n149s,f366a in an outward-facing state 0.8895 4 402
6ksw-assembly1.cif.gz_C cryo-em structure of the human concentrative nucleoside transporter cnt3 0.8844 5 405
5l26-assembly1.cif.gz_B structure of cntnw in an inward-facing substrate-bound state 0.8843 4 402
5l27-assembly1.cif.gz_A structure of cntnw n149l in the intermediate 1 state 0.8768 5 405
ID Description Score Start End Superfamily
af_Q9SKH8_48_194_1.20.140.40 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Invertase/pectin methylesterase inhibitor family protein 0.2881 289 400 1.20.140.40
af_Q09660_26_489_1.10.630.10 Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 0.2613 41 221 1.10.630.10
af_Q9U3I8_22_291_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2515 4 229 1.20.1070.10
af_Q9Y7Y4_92_240_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.2513 63 229 1.10.357.140
af_Q21883_241_439_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.2477 58 271 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A655YCX6-F1-model_v4 deleted 0.9681 293 403
AF-A0A2V9KKA0-F1-model_v4 NupC/NupG family nucleoside CNT transporter 0.9673 287 403 GO:0005337
GO:0005886
GO:0015293
AF-A0A7W0BSM8-F1-model_v4 deleted 0.9553 1 404
AF-A0A3C1XQM2-F1-model_v4 deleted 0.9552 289 404
AF-A0A1Y6CAD1-F1-model_v4 Concentrative nucleoside transporter, CNT family 0.9551 4 404 GO:0005337
GO:0005886
GO:0015293

Feature Viewer

pLDDT pTM Quality
86.31 0.87 High
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Predicted Structure (AlphaFold2)

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