F358324

General Info

Members Datasets Scaffolds Average Seq Length
246 147 229 349

Family's Representative Sequence

Representative Sequence 3300035695|Ga0373927_0032188|Ga0373927_0032188_1727_2878
Length 383
Sequence MMFCYLIFAFPSVSPRKASMSPKPTPDYSILSLLKHHEMKKILVIEDDEQVRDNTAEILELANYKVYRAENGKEGIVTAMEKVPDLIICDVTMPVLDGYGVLHLLKKNPALCNTLFIFLTAKADRSEMRKGMDLGADDYLTKPFEEMELLQAIETRLKKADQVNKYNNAQIEAPDFRKSITENEMMQLLVNNRDINVYKKKQLIYSEGSRPLRLYCIQKGKVKTFRTNQDGKQLIIGLYKEGDFFGYAALMEGTAFHETAEAIEQVELTLIPKEDFMELMNACREAVKKFTGLLTQSIAQKEELLLGMAYDSLRKKVANALVVVYGIYKASIDMSRQNLAAIAGTATESMIRTLNEFKYEQLIDIKNGVITILNEKKLVNLVN

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2818991444 Filimonas endophytica 3197 Isolate Unclassified
4 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
5 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
6 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
7 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
8 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
9 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
10 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
11 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
12 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
13 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
14 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
15 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
16 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
17 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
18 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
19 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
20 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
21 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
22 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
23 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
24 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
25 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
26 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
27 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
28 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
29 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
30 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
31 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
32 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
33 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
34 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
35 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
36 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
37 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
38 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
39 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
40 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
41 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
42 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
45 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
69 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
71 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
72 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
79 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
96 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
100 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
101 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
102 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
103 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
104 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
105 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
113 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
116 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
125 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
126 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
127 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
128 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
132 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
133 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
134 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
135 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
136 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
137 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
138 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
139 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
140 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
143 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
144 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
145 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
146 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
147 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.09
Metatranscriptomes 0
Isolates 6.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.8
Nodule 0
Rhizoplane 0
Rhizosphere 62.6
Stem 0
Stem Tuber 0
Unclassified 12.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_577364 2162886007 Bacteria 146603
2 SwRhRL2b_contig_688001 2162886007 Bacteria 2445
3 JGI24740J21852_10003242 3300001979 Bacteria 7182
4 JGI24739J22299_10001287 3300001989 Bacteria 9439
5 JGI24739J22299_10014496 3300001989 Bacteria 2868
6 JGI25154J39366_1000016 3300002738 Bacteria 255057
7 JGI25153J46596_10006376 3300003215 Bacteria 5982
8 JGI25153J46596_10026813 3300003215 Bacteria 2032
9 rootH1_10068965 3300003316 Bacteria 3270
10 rootH1_10094847 3300003316 Bacteria 1947
11 rootH2_10026300 3300003320 Bacteria 12440
12 rootH2_10128914 3300003320 Bacteria 5474
13 rootL2_10007625 3300003322 Bacteria 29049
14 rootL2_10023864 3300003322 Bacteria 36647
15 rootL2_10127285 3300003322 Bacteria 3300
16 rootH1_10002878 3300003323 Bacteria 7345
17 rootH1_10006882 3300003323 Bacteria 7446
18 rootH1_10025785 3300003323 Bacteria 28208
19 rootH1_10041085 3300003316 Bacteria 2137
20 rootH1_10041085 3300003323 Bacteria 5329
21 rootH1_10069763 3300003323 Bacteria 3236
22 rootH1_10103755 3300003323 Bacteria 4051
23 rootH1_10213841 3300003323 Bacteria 3020
24 JGI25160J50197_1000453 3300003354 Bacteria 25592
25 JGI25160J50197_1004645 3300003354 Bacteria 5893
26 Ga0055542_1006013 3300003762 Bacteria 2649
27 Ga0055526_1012137 3300003771 Unclassified 3791
28 Ga0055528_1000118 3300003790 Bacteria 62674
29 Ga0055528_1000198 3300003790 Bacteria 51108
30 Ga0055528_1000736 3300003790 Bacteria 22858
31 Ga0055530_10000619 3300003791 Bacteria 30885
32 Ga0055530_10001761 3300003791 Bacteria 15130
33 Ga0055531_10000023 3300003794 Bacteria 165025
34 Ga0055531_10000264 3300003794 Bacteria 55162
35 Ga0065165_1000017 3300005262 Bacteria 278286
36 Ga0065165_1000182 3300005262 Bacteria 110108
37 Ga0065714_10070915 3300005288 Bacteria 3728
38 Ga0065704_10070133 3300005289 Bacteria 1266035
39 Ga0065704_10082599 3300005289 Unclassified 3578
40 Ga0065704_10083648 3300005289 Bacteria 3435
41 Ga0070658_10020098 3300005327 Bacteria 5349
42 Ga0070658_10155250 3300005327 Bacteria 1918
43 Ga0070658_10238795 3300005327 Bacteria 1540
44 Ga0070683_100011874 3300005329 Bacteria 7549
45 Ga0070683_100156417 3300005329 Bacteria 2162
46 Ga0070680_100256823 3300005336 Unclassified 1478
47 Ga0070682_100000018 3300005337 Bacteria 229427
48 Ga0070682_100087660 3300005337 Bacteria 2030
49 Ga0068868_100093832 3300005338 Bacteria 2420
50 Ga0070675_100013902 3300005354 Bacteria 6337
51 Ga0070675_100115361 3300005354 Bacteria 2277
52 Ga0070688_100073628 3300005365 Bacteria 2191
53 Ga0070659_100101362 3300005366 Bacteria 2318
54 Ga0070714_100043859 3300005435 Bacteria 3785
55 Ga0070713_100052777 3300005436 Bacteria 3367
56 Ga0070662_100038862 3300005457 Bacteria 3382
57 Ga0070685_10035917 3300005466 Bacteria 2799
58 Ga0070707_100384581 3300005468 Bacteria 1363
59 Ga0070679_100068478 3300005530 Bacteria 3540
60 Ga0070679_100250191 3300005530 Bacteria 1729
61 Ga0068853_100445271 3300005539 Unclassified 1218
62 Ga0070672_100114556 3300005543 Bacteria 2201
63 Ga0070664_100289465 3300005564 Bacteria 1479
64 Ga0068857_100047570 3300005577 Bacteria 3808
65 Ga0068857_100173686 3300005577 Bacteria 1959
66 Ga0068856_100038867 3300005614 Bacteria 4672
67 Ga0068852_100111515 3300005616 Bacteria 2487
68 Ga0068852_100216233 3300005616 Bacteria 1820
69 Ga0068859_100000249 3300005617 Bacteria 53191
70 Ga0068864_100125744 3300005618 Bacteria 2297
71 Ga0068851_10025402 3300005834 Bacteria 2906
72 Ga0068860_100003272 3300005843 Bacteria 16676
73 Ga0068860_100262716 3300005843 Bacteria 1683
74 Ga0097621_100157106 3300006237 Bacteria 1952
75 Ga0097621_100174243 3300006237 Bacteria 1856
76 Ga0105240_10452527 3300009093 Bacteria 1436
77 Ga0114129_10002810 3300009147 Bacteria 24282
78 Ga0114129_10004479 3300009147 Bacteria 19696
79 Ga0114129_10011762 3300009147 Bacteria 12453
80 Ga0105237_10041270 3300009545 Bacteria 4654
81 Ga0105239_10004524 3300010375 Bacteria 16578
82 Ga0105239_10046224 3300010375 Bacteria 4770
83 Ga0157371_10001086 3300013102 Bacteria 29437
84 Ga0157371_10009829 3300013102 Bacteria 7500
85 Ga0157371_10013988 3300013102 Bacteria 6074
86 Ga0157371_10061137 3300013102 Bacteria 2671
87 Ga0157371_10133822 3300013102 Bacteria 1765
88 Ga0157371_10170453 3300013102 Bacteria 1555
89 Ga0157370_10099842 3300013104 Bacteria 2720
90 Ga0157370_10178973 3300013104 Bacteria 1971
91 Ga0157369_10068267 3300013105 Bacteria 3819
92 Ga0157374_10153126 3300013296 Bacteria 2243
93 Ga0157378_10037928 3300013297 Bacteria 4270
94 Ga0163162_10126254 3300013306 Bacteria 2665
95 Ga0163162_10176666 3300013306 Bacteria 2261
96 Ga0163162_10257332 3300013306 Bacteria 1877
97 Ga0157372_10001592 3300013307 Bacteria 24698
98 Ga0157372_10006286 3300013307 Bacteria 12632
99 Ga0157372_10089557 3300013307 Bacteria 3496
100 Ga0157372_10210075 3300013307 Bacteria 2255
101 Ga0157372_10422013 3300013307 Bacteria 1554
102 Ga0157375_10180837 3300013308 Unclassified 2260
103 Ga0157375_10278021 3300013308 Bacteria 1837
104 Ga0157380_10000006 3300014326 Bacteria 160491
105 Ga0157376_10092879 3300014969 Bacteria 2618
106 Ga0157376_10251916 3300014969 Bacteria 1650
107 Ga0209436_103059 3300025208 Bacteria 4613
108 Ga0209258_100159 3300025242 Bacteria 155141
109 Ga0209646_1000003 3300025246 Bacteria 1160860
110 Ga0209026_1000210 3300025250 Bacteria 81101
111 Ga0209148_1000156 3300025254 Bacteria 142889
112 Ga0209673_1000016 3300025273 Bacteria 506202
113 Ga0209673_1000083 3300025273 Bacteria 216509
114 Ga0209130_1001680 3300025284 Bacteria 13477
115 Ga0209564_1000328 3300025295 Bacteria 92405
116 Ga0209564_1001445 3300025295 Bacteria 24263
117 Ga0209564_1004494 3300025295 Bacteria 8511
118 Ga0209758_1001393 3300025297 Bacteria 28715
119 Ga0209758_1002394 3300025297 Bacteria 19281
120 Ga0209758_1003824 3300025297 Bacteria 13230
121 Ga0209758_1004150 3300025297 Bacteria 12345
122 Ga0209758_1006613 3300025297 Bacteria 8214
123 Ga0209050_1000124 3300025298 Bacteria 194022
124 Ga0209050_1000831 3300025298 Bacteria 42756
125 Ga0207426_1000051 3300025302 Bacteria 391700
126 Ga0207426_1000431 3300025302 Bacteria 68516
127 Ga0207426_1000925 3300025302 Bacteria 29342
128 Ga0207426_1000978 3300025302 Bacteria 28163
129 Ga0207426_1007877 3300025302 Bacteria 4393
130 Ga0207426_1015666 3300025302 Bacteria 2744
131 Ga0209051_1006264 3300025303 Bacteria 6742
132 Ga0209257_1000008 3300025304 Bacteria 1294570
133 Ga0209257_1000013 3300025304 Bacteria 1047305
134 Ga0209257_1001535 3300025304 Bacteria 26927
135 Ga0209257_1001729 3300025304 Bacteria 24286
136 Ga0207705_10085675 3300025909 Bacteria 2302
137 Ga0207707_10091236 3300025912 Bacteria 2663
138 Ga0207671_10025576 3300025914 Bacteria 4433
139 Ga0207657_10001260 3300025919 Bacteria 27067
140 Ga0207700_10039655 3300025928 Bacteria 3431
141 Ga0207706_10013033 3300025933 Bacteria 7567
142 Ga0207661_10025422 3300025944 Bacteria 4501
143 Ga0207661_10049572 3300025944 Bacteria 3343
144 Ga0207677_10070406 3300026023 Bacteria 2465
145 Ga0207702_10038001 3300026078 Bacteria 4032
146 Ga0207702_10040542 3300026078 Bacteria 3903
147 Ga0207702_10235191 3300026078 Bacteria 1714
148 Ga0207674_10058017 3300026116 Bacteria 3923
149 Ga0207674_10061583 3300026116 Bacteria 3792
150 Ga0207674_10095993 3300026116 Bacteria 2950
151 Ga0207674_10200436 3300026116 Bacteria 1945
152 Ga0268264_10008405 3300028381 Bacteria 8578
153 Ga0307515_10000001 3300028794 Bacteria 4259510
154 Ga0265327_10000009 3300031251 Bacteria 616360
155 Ga0265327_10000544 3300031251 Bacteria 64453
156 Ga0265327_10023959 3300031251 Bacteria 3598
157 Ga0307513_10033192 3300031456 Bacteria 5804
158 Ga0307411_10000233 3300032005 Bacteria 18112
159 Ga0373927_0032188 3300035695 Bacteria 3415
160 Ga0373927_0071763 3300035695 Bacteria 2241
161 Ga0395905_0001552 3300037471 Bacteria 27460
162 Ga0395901_0000334 3300038443 Bacteria 57695
163 Ga0439436_0003279 3300041404 Bacteria 4909
164 Ga0439436_0007561 3300041404 Bacteria 3343
165 Ga0439439_0001853 3300041406 Bacteria 4351
166 Ga0439449_0026142 3300042007 Unclassified 2179
167 Ga0439449_0068514 3300042007 Bacteria 1308
168 Ga0439457_000008 3300042014 Bacteria 42068
169 Ga0439457_000088 3300042014 Bacteria 20851
170 Ga0439457_004542 3300042014 Unclassified 3603
171 Ga0439462_0002464 3300042015 Bacteria 4303
172 Ga0466969_0000051 3300044656 Bacteria 61557
173 Ga0466972_0000008 3300044658 Bacteria 264518
174 Ga0466972_0013924 3300044658 Bacteria 4034
175 Ga0466966_0011781 3300044684 Bacteria 5792
176 Ga0453684_0006782 3300044712 Bacteria 21547
177 Ga0466968_0010716 3300044735 Bacteria 3561
178 Ga0466957_0000215 3300044842 Bacteria 27219
179 Ga0466957_0002033 3300044842 Bacteria 10789
180 Ga0466959_0000264 3300045049 Bacteria 32164
181 Ga0451576_0000020 3300045051 Bacteria 529568
182 Ga0451576_0005084 3300045051 Bacteria 16676
183 Ga0495627_001763 3300046453 Bacteria 11629
184 Ga0495633_0000299 3300046558 Bacteria 56377
185 Ga0495686_0003037 3300047472 Bacteria 14877
186 Ga0496124_0051383 3300048927 Bacteria 3508
187 Ga0496126_0015333 3300048929 Bacteria 7711
188 Ga0501034_0099701 3300049571 Bacteria 2899
189 Ga0501037_0047893 3300049573 Bacteria 3132
190 Ga0501038_0020809 3300049574 Bacteria 5896
191 Ga0501040_0174286 3300049576 Bacteria 1524
192 Ga0501043_0120796 3300049579 Bacteria 2055
193 Ga0501047_0026432 3300049581 Bacteria 5584
194 Ga0501047_0153533 3300049581 Bacteria 2177
195 Ga0501047_0167389 3300049581 Bacteria 2068
196 Ga0501070_0033824 3300049586 Bacteria 4278
197 Ga0501073_0088885 3300049589 Bacteria 2148
198 Ga0501207_023453 3300049654 Bacteria 1001
199 Ga0501225_0000631 3300049705 Bacteria 10983
200 Ga0501225_0000641 3300049705 Bacteria 10856
201 Ga0501241_000133 3300049758 Bacteria 16457
202 Ga0501035_0091088 3300049822 Bacteria 2684
203 Ga0501044_0035256 3300049823 Bacteria 5241
204 Ga0501044_0102368 3300049823 Bacteria 2880
205 Ga0501044_0177831 3300049823 Bacteria 2096
206 Ga0501044_0197685 3300049823 Bacteria 1970
207 Ga0501044_0229412 3300049823 Bacteria 1805
208 nmdc:mga05p37_13211_c1 3300050507 Bacteria 9885
209 nmdc:mga05p37_8819_c1 3300050507 Bacteria 11916
210 Ga0500578_0000024 3300053086 Bacteria 151503
211 Ga0500644_0022503 3300053088 Bacteria 1902
212 Ga0500644_0067784 3300053088 Bacteria 1277
213 Ga0500646_0002534 3300053090 Bacteria 4745
214 Ga0500583_0000041 3300053092 Bacteria 84653
215 Ga0500583_0013799 3300053092 Bacteria 3139
216 Ga0500651_0067214 3300053093 Bacteria 2232
217 Ga0500562_000010 3300053108 Bacteria 183815
218 Ga0500569_000064 3300053109 Bacteria 18226
219 Ga0500652_004743 3300053131 Bacteria 4229
220 Ga0500559_0058412 3300053136 Bacteria 1715
221 Ga0500577_0025179 3300053142 Unclassified 2010
222 Ga0500616_0003784 3300053153 Bacteria 11247
223 Ga0500616_0069170 3300053153 Bacteria 1806
224 Ga0500622_0000571 3300053156 Bacteria 33686
225 Ga0500622_0009940 3300053156 Bacteria 5247
226 Ga0500639_052642 3300053163 Bacteria 2119
227 Ga0500636_0115838 3300053177 Unclassified 1509
228 Ga0500645_004161 3300053730 Bacteria 5634
229 Ga0466962_0108588 3300061719 Bacteria 1335

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049654 Ga0501207_023453 Ga0501207_023453_56_973 305
2 3300005435 Ga0070714_100043859 Ga0070714_1000438592 319
3 3300005436 Ga0070713_100052777 Ga0070713_1000527772 319
4 3300025928 Ga0207700_10039655 Ga0207700_100396552 319
5 3300005288 Ga0065714_10070915 Ga0065714_100709151 323
6 3300037471 Ga0395905_0001552 Ga0395905_0001552_4204_5262 324
7 3300014326 Ga0157380_10000006 Ga0157380_10000006135 326
8 3300005338 Ga0068868_100093832 Ga0068868_1000938322 327
9 3300005614 Ga0068856_100038867 Ga0068856_1000388674 327
10 3300026023 Ga0207677_10070406 Ga0207677_100704062 327
11 3300026078 Ga0207702_10235191 Ga0207702_102351912 327
12 3300005564 Ga0070664_100289465 Ga0070664_1002894651 329
13 3300013306 Ga0163162_10126254 Ga0163162_101262545 329
14 3300013308 Ga0157375_10278021 Ga0157375_102780212 329
15 3300044842 Ga0466957_0000215 Ga0466957_0000215_17942_18985 331
16 3300049571 Ga0501034_0099701 Ga0501034_0099701_1126_2151 332
17 3300049576 Ga0501040_0174286 Ga0501040_0174286_87_1112 332
18 3300049822 Ga0501035_0091088 Ga0501035_0091088_382_1407 332
19 3300003316 rootH1_10094847 rootH1_100948472 334
20 3300003323 rootH1_10002878 rootH1_100028787 334
21 3300003794 Ga0055531_10000023 Ga0055531_1000002316 334
22 3300025304 Ga0209257_1000013 Ga0209257_1000013457 334
23 3300045051 Ga0451576_0000020 Ga0451576_0000020_399450_400508 334
24 3300048929 Ga0496126_0015333 Ga0496126_0015333_2861_3919 334
25 3300049573 Ga0501037_0047893 Ga0501037_0047893_2006_3031 334
26 3300049574 Ga0501038_0020809 Ga0501038_0020809_1627_2652 334
27 3300049823 Ga0501044_0035256 Ga0501044_0035256_2960_3985 334
28 3300053156 Ga0500622_0000571 Ga0500622_0000571_25216_26280 334
29 3300006237 Ga0097621_100174243 Ga0097621_1001742432 339
30 2162886007 SwRhRL2b_contig_688001 SwRhRL2b_0894.00007920 340
31 3300003323 rootH1_10069763 rootH1_100697633 340
32 3300005289 Ga0065704_10083648 Ga0065704_100836483 340
33 3300009147 Ga0114129_10002810 Ga0114129_100028104 340
34 3300009093 Ga0105240_10452527 Ga0105240_104525271 341
35 3300044658 Ga0466972_0000008 Ga0466972_0000008_30141_31187 342
36 iso_pu_bacteria 2738541278 2738729094 342
37 iso_pu_bacteria 2738541278 2738730005 342
38 iso_pu_bacteria 2818991444 2819591007 342
39 3300003322 rootL2_10127285 rootL2_101272853 345
40 3300010375 Ga0105239_10004524 Ga0105239_100045248 345
41 3300035695 Ga0373927_0032188 Ga0373927_0032188_1727_2878 345
42 3300042014 Ga0439457_004542 Ga0439457_004542_1984_3021 345
43 3300044842 Ga0466957_0002033 Ga0466957_0002033_1799_2857 345
44 3300053088 Ga0500644_0067784 Ga0500644_0067784_135_1232 345
45 3300061719 Ga0466962_0108588 Ga0466962_0108588_145_1248 345
46 3300003316 rootH1_10068965 rootH1_100689653 346
47 3300003323 rootH1_10041085 rootH1_100410855 346
48 3300003323 rootH1_10103755 rootH1_101037554 346
49 3300005354 Ga0070675_100013902 Ga0070675_1000139024 346
50 3300005468 Ga0070707_100384581 Ga0070707_1003845811 346
51 3300005843 Ga0068860_100262716 Ga0068860_1002627162 346
52 3300009147 Ga0114129_10004479 Ga0114129_100044797 346
53 3300009147 Ga0114129_10011762 Ga0114129_100117623 346
54 3300009545 Ga0105237_10041270 Ga0105237_100412702 346
55 3300010375 Ga0105239_10046224 Ga0105239_100462248 346
56 3300013307 Ga0157372_10006286 Ga0157372_100062866 346
57 3300025914 Ga0207671_10025576 Ga0207671_100255763 346
58 3300026078 Ga0207702_10038001 Ga0207702_100380012 346
59 3300026116 Ga0207674_10061583 Ga0207674_100615833 346
60 3300031456 Ga0307513_10033192 Ga0307513_100331922 346
61 3300035695 Ga0373927_0071763 Ga0373927_0071763_704_1756 346
62 3300041404 Ga0439436_0003279 Ga0439436_0003279_2939_3979 346
63 3300041404 Ga0439436_0007561 Ga0439436_0007561_735_1796 346
64 3300041406 Ga0439439_0001853 Ga0439439_0001853_752_1792 346
65 3300042007 Ga0439449_0026142 Ga0439449_0026142_994_2034 346
66 3300042007 Ga0439449_0068514 Ga0439449_0068514_211_1272 346
67 3300042014 Ga0439457_000008 Ga0439457_000008_14772_15812 346
68 3300042014 Ga0439457_000088 Ga0439457_000088_8769_9830 346
69 3300042015 Ga0439462_0002464 Ga0439462_0002464_539_1579 346
70 3300044656 Ga0466969_0000051 Ga0466969_0000051_54444_55550 346
71 3300044658 Ga0466972_0013924 Ga0466972_0013924_1423_2484 346
72 3300044684 Ga0466966_0011781 Ga0466966_0011781_3977_5083 346
73 3300044735 Ga0466968_0010716 Ga0466968_0010716_2077_3132 346
74 3300045049 Ga0466959_0000264 Ga0466959_0000264_15641_16747 346
75 3300048927 Ga0496124_0051383 Ga0496124_0051383_1802_2842 346
76 3300049581 Ga0501047_0026432 Ga0501047_0026432_4115_5176 346
77 3300049581 Ga0501047_0167389 Ga0501047_0167389_373_1434 346
78 3300049705 Ga0501225_0000631 Ga0501225_0000631_6883_7944 346
79 3300049705 Ga0501225_0000641 Ga0501225_0000641_8499_9539 346
80 3300049823 Ga0501044_0177831 Ga0501044_0177831_684_1745 346
81 3300049823 Ga0501044_0229412 Ga0501044_0229412_433_1473 346
82 3300050507 nmdc:mga05p37_13211_c1 nmdc:mga05p37_13211_c1_7660_8700 346
83 3300050507 nmdc:mga05p37_8819_c1 nmdc:mga05p37_8819_c1_1230_2282 346
84 3300053086 Ga0500578_0000024 Ga0500578_0000024_96624_97685 346
85 3300053092 Ga0500583_0000041 Ga0500583_0000041_57960_59060 346
86 3300053092 Ga0500583_0013799 Ga0500583_0013799_1108_2169 346
87 3300053153 Ga0500616_0069170 Ga0500616_0069170_211_1272 346
88 3300053163 Ga0500639_052642 Ga0500639_052642_51_1112 346
89 iso_pu_bacteria 2896109856 2896111763 347
90 3300013308 Ga0157375_10180837 Ga0157375_101808372 348
91 iso_pu_bacteria 2818991444 2819588466 348
92 iso_pu_bacteria 2818991460 2819682344 348
93 iso_pu_bacteria 2883068021 2883072288 348
94 iso_pu_bacteria 2883068021 2883072408 348
95 iso_pu_bacteria 2884791551 2884795357 348
96 iso_pu_bacteria 2896109856 2896114735 348
97 iso_pu_bacteria 2929177148 2929178154 348
98 iso_pu_bacteria 2929177148 2929179097 348
99 iso_pu_bacteria 2929239360 2929242122 348
100 iso_pu_bacteria 2945977869 2945981497 348
101 iso_pu_bacteria 2946013367 2946013623 348
102 iso_pu_bacteria 2946013367 2946019096 348
103 iso_pu_bacteria 8003151029 8003156607 348
104 3300005543 Ga0070672_100114556 Ga0070672_1001145562 349
105 3300014969 Ga0157376_10092879 Ga0157376_100928793 349
106 3300049579 Ga0501043_0120796 Ga0501043_0120796_260_1312 349
107 3300049586 Ga0501070_0033824 Ga0501070_0033824_1003_2055 349
108 3300049589 Ga0501073_0088885 Ga0501073_0088885_1069_2121 349
109 3300049823 Ga0501044_0102368 Ga0501044_0102368_1516_2568 349
110 3300005327 Ga0070658_10155250 Ga0070658_101552502 350
111 3300005327 Ga0070658_10238795 Ga0070658_102387952 350
112 3300005329 Ga0070683_100011874 Ga0070683_1000118742 350
113 3300005329 Ga0070683_100156417 Ga0070683_1001564172 350
114 3300005336 Ga0070680_100256823 Ga0070680_1002568232 350
115 3300005337 Ga0070682_100087660 Ga0070682_1000876602 350
116 3300005354 Ga0070675_100115361 Ga0070675_1001153611 350
117 3300005365 Ga0070688_100073628 Ga0070688_1000736282 350
118 3300005457 Ga0070662_100038862 Ga0070662_1000388622 350
119 3300005466 Ga0070685_10035917 Ga0070685_100359173 350
120 3300005530 Ga0070679_100068478 Ga0070679_1000684784 350
121 3300005530 Ga0070679_100250191 Ga0070679_1002501912 350
122 3300005539 Ga0068853_100445271 Ga0068853_1004452711 350
123 3300005616 Ga0068852_100111515 Ga0068852_1001115153 350
124 3300005616 Ga0068852_100216233 Ga0068852_1002162333 350
125 3300005843 Ga0068860_100003272 Ga0068860_1000032725 350
126 3300006237 Ga0097621_100157106 Ga0097621_1001571062 350
127 3300013102 Ga0157371_10009829 Ga0157371_100098294 350
128 3300013104 Ga0157370_10099842 Ga0157370_100998423 350
129 3300013104 Ga0157370_10178973 Ga0157370_101789732 350
130 3300013105 Ga0157369_10068267 Ga0157369_100682672 350
131 3300013296 Ga0157374_10153126 Ga0157374_101531262 350
132 3300013297 Ga0157378_10037928 Ga0157378_100379284 350
133 3300013306 Ga0163162_10176666 Ga0163162_101766662 350
134 3300013306 Ga0163162_10257332 Ga0163162_102573322 350
135 3300013307 Ga0157372_10001592 Ga0157372_1000159215 350
136 3300013307 Ga0157372_10210075 Ga0157372_102100752 350
137 3300014969 Ga0157376_10251916 Ga0157376_102519162 350
138 3300025919 Ga0207657_10001260 Ga0207657_1000126018 350
139 3300025933 Ga0207706_10013033 Ga0207706_100130332 350
140 3300025944 Ga0207661_10025422 Ga0207661_100254222 350
141 3300025944 Ga0207661_10049572 Ga0207661_100495724 350
142 3300026078 Ga0207702_10040542 Ga0207702_100405422 350
143 3300026116 Ga0207674_10095993 Ga0207674_100959932 350
144 3300028381 Ga0268264_10008405 Ga0268264_100084054 350
145 3300044712 Ga0453684_0006782 Ga0453684_0006782_11969_13024 350
146 3300045051 Ga0451576_0005084 Ga0451576_0005084_943_1998 350
147 3300005327 Ga0070658_10020098 Ga0070658_100200983 351
148 3300005366 Ga0070659_100101362 Ga0070659_1001013622 351
149 3300005577 Ga0068857_100173686 Ga0068857_1001736863 351
150 3300005618 Ga0068864_100125744 Ga0068864_1001257442 351
151 3300013307 Ga0157372_10422013 Ga0157372_104220131 351
152 3300025909 Ga0207705_10085675 Ga0207705_100856751 351
153 3300025912 Ga0207707_10091236 Ga0207707_100912362 351
154 3300026116 Ga0207674_10200436 Ga0207674_102004362 351
155 3300028794 Ga0307515_10000001 Ga0307515_100000011243 351
156 3300001979 JGI24740J21852_10003242 JGI24740J21852_100032428 352
157 3300001989 JGI24739J22299_10001287 JGI24739J22299_100012873 352
158 3300001989 JGI24739J22299_10014496 JGI24739J22299_100144963 352
159 3300002738 JGI25154J39366_1000016 JGI25154J39366_1000016117 352
160 3300003215 JGI25153J46596_10006376 JGI25153J46596_100063768 352
161 3300003215 JGI25153J46596_10026813 JGI25153J46596_100268132 352
162 3300003320 rootH2_10026300 rootH2_100263008 352
163 3300003320 rootH2_10128914 rootH2_101289143 352
164 3300003322 rootL2_10007625 rootL2_1000762512 352
165 3300003322 rootL2_10023864 rootL2_1002386420 352
166 3300003323 rootH1_10006882 rootH1_100068822 352
167 3300003323 rootH1_10025785 rootH1_1002578518 352
168 3300003323 rootH1_10213841 rootH1_102138415 352
169 3300003354 JGI25160J50197_1000453 JGI25160J50197_100045311 352
170 3300003354 JGI25160J50197_1004645 JGI25160J50197_10046454 352
171 3300003762 Ga0055542_1006013 Ga0055542_10060132 352
172 3300003771 Ga0055526_1012137 Ga0055526_10121374 352
173 3300003790 Ga0055528_1000118 Ga0055528_10001185 352
174 3300003790 Ga0055528_1000198 Ga0055528_10001987 352
175 3300003790 Ga0055528_1000736 Ga0055528_100073621 352
176 3300003791 Ga0055530_10000619 Ga0055530_100006193 352
177 3300003791 Ga0055530_10001761 Ga0055530_100017612 352
178 3300003794 Ga0055531_10000264 Ga0055531_1000026448 352
179 3300005262 Ga0065165_1000017 Ga0065165_1000017190 352
180 3300005262 Ga0065165_1000182 Ga0065165_100018239 352
181 3300005289 Ga0065704_10082599 Ga0065704_100825992 352
182 3300005337 Ga0070682_100000018 Ga0070682_100000018163 352
183 3300005577 Ga0068857_100047570 Ga0068857_1000475702 352
184 3300005617 Ga0068859_100000249 Ga0068859_10000024934 352
185 3300005834 Ga0068851_10025402 Ga0068851_100254022 352
186 3300013102 Ga0157371_10001086 Ga0157371_1000108620 352
187 3300013102 Ga0157371_10013988 Ga0157371_100139883 352
188 3300013102 Ga0157371_10061137 Ga0157371_100611373 352
189 3300013102 Ga0157371_10133822 Ga0157371_101338221 352
190 3300013102 Ga0157371_10170453 Ga0157371_101704532 352
191 3300013307 Ga0157372_10089557 Ga0157372_100895572 352
192 3300025208 Ga0209436_103059 Ga0209436_1030592 352
193 3300025242 Ga0209258_100159 Ga0209258_10015929 352
194 3300025246 Ga0209646_1000003 Ga0209646_1000003118 352
195 3300025250 Ga0209026_1000210 Ga0209026_100021046 352
196 3300025254 Ga0209148_1000156 Ga0209148_1000156107 352
197 3300025273 Ga0209673_1000016 Ga0209673_10000169 352
198 3300025273 Ga0209673_1000083 Ga0209673_100008335 352
199 3300025284 Ga0209130_1001680 Ga0209130_10016806 352
200 3300025295 Ga0209564_1000328 Ga0209564_100032865 352
201 3300025295 Ga0209564_1001445 Ga0209564_100144511 352
202 3300025295 Ga0209564_1004494 Ga0209564_10044946 352
203 3300025297 Ga0209758_1001393 Ga0209758_100139312 352
204 3300025297 Ga0209758_1002394 Ga0209758_10023947 352
205 3300025297 Ga0209758_1003824 Ga0209758_10038246 352
206 3300025297 Ga0209758_1004150 Ga0209758_100415010 352
207 3300025297 Ga0209758_1006613 Ga0209758_10066132 352
208 3300025298 Ga0209050_1000124 Ga0209050_1000124169 352
209 3300025298 Ga0209050_1000831 Ga0209050_100083128 352
210 3300025302 Ga0207426_1000051 Ga0207426_100005158 352
211 3300025302 Ga0207426_1000431 Ga0207426_100043145 352
212 3300025302 Ga0207426_1000925 Ga0207426_100092510 352
213 3300025302 Ga0207426_1000978 Ga0207426_100097814 352
214 3300025302 Ga0207426_1007877 Ga0207426_10078774 352
215 3300025302 Ga0207426_1015666 Ga0207426_10156663 352
216 3300025303 Ga0209051_1006264 Ga0209051_10062646 352
217 3300025304 Ga0209257_1000008 Ga0209257_1000008210 352
218 3300025304 Ga0209257_1001535 Ga0209257_100153512 352
219 3300025304 Ga0209257_1001729 Ga0209257_100172916 352
220 3300026116 Ga0207674_10058017 Ga0207674_100580172 352
221 3300031251 Ga0265327_10000009 Ga0265327_10000009325 352
222 3300031251 Ga0265327_10000544 Ga0265327_1000054457 352
223 3300031251 Ga0265327_10023959 Ga0265327_100239594 352
224 3300032005 Ga0307411_10000233 Ga0307411_100002332 352
225 3300038443 Ga0395901_0000334 Ga0395901_0000334_25784_26902 352
226 3300046453 Ga0495627_001763 Ga0495627_001763_8285_9343 352
227 3300046558 Ga0495633_0000299 Ga0495633_0000299_33353_34435 352
228 3300046558 Ga0495633_0000299 Ga0495633_0000299_41894_42952 352
229 3300047472 Ga0495686_0003037 Ga0495686_0003037_9543_10601 352
230 3300049581 Ga0501047_0153533 Ga0501047_0153533_354_1412 352
231 3300049758 Ga0501241_000133 Ga0501241_000133_8069_9127 352
232 3300049823 Ga0501044_0197685 Ga0501044_0197685_853_1911 352
233 3300053088 Ga0500644_0022503 Ga0500644_0022503_55_1113 352
234 3300053090 Ga0500646_0002534 Ga0500646_0002534_3314_4372 352
235 3300053093 Ga0500651_0067214 Ga0500651_0067214_1092_2174 352
236 3300053108 Ga0500562_000010 Ga0500562_000010_143659_144717 352
237 3300053109 Ga0500569_000064 Ga0500569_000064_3029_4087 352
238 3300053131 Ga0500652_004743 Ga0500652_004743_2731_3789 352
239 3300053136 Ga0500559_0058412 Ga0500559_0058412_486_1544 352
240 3300053142 Ga0500577_0025179 Ga0500577_0025179_669_1727 352
241 3300053153 Ga0500616_0003784 Ga0500616_0003784_4818_5876 352
242 3300053156 Ga0500622_0009940 Ga0500622_0009940_231_1289 352
243 3300053177 Ga0500636_0115838 Ga0500636_0115838_434_1492 352
244 3300053730 Ga0500645_004161 Ga0500645_004161_3067_4125 352
245 2162886007 SwRhRL2b_contig_577364 SwRhRL2b_0794.00001210 353
246 3300005289 Ga0065704_10070133 Ga0065704_10070133527 353

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

42

154

0.98

PF00027

cNMP_binding

Cyclic nucleotide-binding domain

195

283

0.97

PF13545

HTH_Crp_2

Crp-like helix-turn-helix domain

304

381

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9816 1 123
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9792 2 121
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9788 2 121
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9759 2 121
1nxo-assembly1.cif.gz_A-2 micarec ph7.0 0.9714 2 122
ID Description Score Start End Superfamily
af_P9WGM1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9812 2 80 3.40.50.2300
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9792 1 127 3.40.50.2300
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9767 1 83 3.40.50.2300
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.976 1 80 3.40.50.2300
1nxoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9714 2 122 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A1M5AB37-F1-model_v4 Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP 0.9907 2 127 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A257CP57-F1-model_v4 Response regulatory domain-containing protein 0.9885 2 119 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A6M0S994-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9851 2 119 GO:0000155
GO:0005737
GO:0006935
AF-A0A6L7SZ49-F1-model_v4 Response regulator 0.9833 3 119 GO:0000160
AF-A0A0B0H5R4-F1-model_v4 Response regulator 0.9828 2 117 GO:0000160

Feature Viewer

pLDDT pTM Quality
79.96 0.53 Medium
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Predicted Structure (AlphaFold2)

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