F358204

General Info

Members Datasets Scaffolds Average Seq Length
246 179 228 515

Family's Representative Sequence

Representative Sequence 3300021361|Ga0213872_10001494|Ga0213872_100014948
Length 573
Sequence MGVQTVTRANRGRDGLNDAWRVRSAVRSFETLSRIPLVAGAASTRCCYPRRFRQCLEVSLITVRTEQTMQAEDQQDGGARSGSFRAVEYVRMSTEHQQYSTENQSDKIADAGKSGLRIDGREALQRLIRDVESGQADFNIILVYDVSRWGRFQDADESAYYEYICRRAGIQVAYCAEQFENDGSPVSTIVKGVKRAMAGEYSRELSTKVFAGQCRLIELGFRQGGPAGFGLRRVLVDQAGNIKSELSRGEHKSLQTDRVILMPGPDSEIGIVRGIYKWFIDEGLQEMEIARRLNEHGVRTELGRTWTRATVREILTNEKYIGNNVYNRVSFKLKKLRVVNQPDMWIRKDGAFNAIVSPEIFYTAQGIIRARSRRFTDEELLEKLRNLYQRRGILSGLIIDEAEEMPSAAAYIHRFGSLIRAYQAVGFTPDRDYAFLEVNKFLRRMHPEIMARTEREIQNLGGVVNRDPATDLLEINREFTVSIVLSRCQNHDDGRRRWKIRFDTGLVPDITVAARLCPDNQAVQDYYLLPHLDFGLPRINLADHNGFEFESYRFESLDYLHKMAERARFRRAA

Samples

Sample ID Description Type Environment
1 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
2 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
3 2643221569 Achromobacter sp. Root565 Isolate Unclassified
4 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
5 2738543015 Pseudomonas sp. GV041 Isolate Unclassified
6 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
7 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
8 2818991450 Burkholderia sp. 604 Isolate Unclassified
9 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
10 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
11 2928058823 Ralstonia sp. 1138 Isolate Unclassified
12 2928135762 Paraburkholderia terricola 1988 Isolate Unclassified
13 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
14 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
15 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
16 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
17 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
18 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
19 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
20 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
21 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
22 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
23 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
24 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
25 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
26 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
27 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
28 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
29 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
30 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
31 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
32 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
33 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
34 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
35 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
36 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
37 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
38 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
57 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
65 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
66 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
67 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
70 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
71 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
78 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
90 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
91 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
92 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
93 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
98 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
99 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
103 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300044650 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4E Metagenome Unclassified
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
112 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
115 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
118 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
121 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
122 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
123 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
124 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
127 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
128 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
131 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
132 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
133 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
134 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
139 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
140 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
141 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
146 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
157 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
158 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
159 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
160 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
164 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
167 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
168 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
169 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
170 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
171 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
172 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
175 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
176 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
177 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
178 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere
179 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.5
Metatranscriptomes 0
Isolates 6.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 30.49
Nodule 0.41
Rhizoplane 1.22
Rhizosphere 52.44
Stem 0
Stem Tuber 0
Unclassified 15.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000539 3300001915 Bacteria 11569
2 JGI24740J21852_10000160 3300001979 Bacteria 26620
3 JGI24735J21928_10001214 3300002067 Bacteria 9158
4 JGI25155J39150_1000310 3300002704 Bacteria 16596
5 JGI25156J39149_1000764 3300002705 Bacteria 16713
6 JGI25154J39366_1000250 3300002738 Bacteria 34596
7 JGI25154J39366_1000530 3300002738 Bacteria 19173
8 JGI25151J46595_10022420 3300003187 Bacteria 2623
9 Ga0055538_1000410 3300003751 Bacteria 16849
10 Ga0055539_1000056 3300003752 Bacteria 155106
11 Ga0055533_1000402 3300003756 Bacteria 16930
12 Ga0055533_1001122 3300003756 Bacteria 7593
13 Ga0055532_1000111 3300003758 Bacteria 86875
14 Ga0055532_1000787 3300003758 Bacteria 11021
15 Ga0055525_1000529 3300003759 Bacteria 18413
16 Ga0055525_1000583 3300003759 Bacteria 15959
17 Ga0055527_1001125 3300003760 Bacteria 6156
18 Ga0055535_1000114 3300003761 Bacteria 86875
19 Ga0055542_1002232 3300003762 Bacteria 6819
20 Ga0055529_1000179 3300003763 Bacteria 86863
21 Ga0055526_1000321 3300003771 Bacteria 39789
22 Ga0055537_1000119 3300003773 Bacteria 59684
23 Ga0055524_1005254 3300003775 Bacteria 5820
24 Ga0055534_1000047 3300003784 Bacteria 94932
25 Ga0055528_1000049 3300003790 Bacteria 94814
26 Ga0055528_1000272 3300003790 Bacteria 43798
27 Ga0055531_10008218 3300003794 Bacteria 5555
28 Ga0055541_1000136 3300003841 Bacteria 40753
29 Ga0055541_1000191 3300003841 Bacteria 27607
30 Ga0055541_1000305 3300003841 Bacteria 16261
31 Ga0065714_10065347 3300005288 Bacteria 10734
32 Ga0070661_100000142 3300005344 Bacteria 58768
33 Ga0070663_100000021 3300005455 Bacteria 111983
34 Ga0068853_100000280 3300005539 Bacteria 36030
35 Ga0070664_100000021 3300005564 Bacteria 111983
36 Ga0068857_100001627 3300005577 Bacteria 18042
37 Ga0068856_100000127 3300005614 Bacteria 76855
38 Ga0075366_10000206 3300006195 Bacteria 25947
39 Ga0075366_10000624 3300006195 Bacteria 16634
40 Ga0075366_10000926 3300006195 Bacteria 14232
41 Ga0099826_10070783 3300006948 Bacteria 2216
42 Ga0105240_10004966 3300009093 Bacteria 19991
43 Ga0105243_10010334 3300009148 Bacteria 7089
44 Ga0105248_10002520 3300009177 Bacteria 20391
45 Ga0105238_10027315 3300009551 Bacteria 5814
46 Ga0157373_10000865 3300013100 Bacteria 23532
47 Ga0157373_10001770 3300013100 Bacteria 16437
48 Ga0157371_10000072 3300013102 Bacteria 163917
49 Ga0157371_10050681 3300013102 Bacteria 2950
50 Ga0157370_10000219 3300013104 Bacteria 72924
51 Ga0157369_10074734 3300013105 Bacteria 3634
52 Ga0157372_10000309 3300013307 Bacteria 54008
53 Ga0182005_1001922 3300015265 Bacteria 7873
54 Ga0213872_10000108 3300021361 Bacteria 76910
55 Ga0213872_10001494 3300021361 Bacteria 15095
56 Ga0213872_10001705 3300021361 Bacteria 13839
57 Ga0209435_100103 3300025206 Bacteria 34650
58 Ga0209784_100006 3300025224 Bacteria 930704
59 Ga0209784_100468 3300025224 Bacteria 16846
60 Ga0209566_100002 3300025225 Bacteria 2614868
61 Ga0209566_100110 3300025225 Bacteria 112077
62 Ga0209566_101232 3300025225 Bacteria 8835
63 Ga0209674_100010 3300025226 Bacteria 1038638
64 Ga0209674_100060 3300025226 Bacteria 282102
65 Ga0209674_100098 3300025226 Bacteria 167037
66 Ga0209672_101675 3300025228 Bacteria 7181
67 Ga0209147_100015 3300025229 Bacteria 565073
68 Ga0209147_100165 3300025229 Bacteria 90385
69 Ga0209563_100109 3300025230 Bacteria 142790
70 Ga0209258_100021 3300025242 Bacteria 565073
71 Ga0209258_100363 3300025242 Bacteria 60668
72 Ga0207425_1000216 3300025245 Bacteria 45716
73 Ga0209646_1000082 3300025246 Bacteria 200645
74 Ga0209646_1000342 3300025246 Bacteria 34650
75 Ga0209026_1001136 3300025250 Bacteria 12559
76 Ga0209026_1001459 3300025250 Bacteria 10446
77 Ga0209026_1001574 3300025250 Bacteria 9846
78 Ga0209677_100007 3300025253 Bacteria 1021332
79 Ga0209677_102889 3300025253 Bacteria 6032
80 Ga0209148_1000190 3300025254 Bacteria 116621
81 Ga0209759_1000092 3300025256 Bacteria 161238
82 Ga0209759_1000607 3300025256 Bacteria 34650
83 Ga0209759_1001449 3300025256 Bacteria 13367
84 Ga0209759_1001777 3300025256 Bacteria 10975
85 Ga0209759_1001802 3300025256 Bacteria 10824
86 Ga0209233_1002486 3300025261 Bacteria 6752
87 Ga0209565_1000112 3300025263 Bacteria 117209
88 Ga0209565_1012662 3300025263 Bacteria 2003
89 Ga0209455_1000028 3300025272 Bacteria 565073
90 Ga0209673_1000210 3300025273 Bacteria 117276
91 Ga0209675_1000142 3300025291 Bacteria 95327
92 Ga0209025_1020821 3300025294 Bacteria 3563
93 Ga0209564_1000245 3300025295 Bacteria 117378
94 Ga0209758_1002142 3300025297 Bacteria 20807
95 Ga0209256_1000252 3300025299 Bacteria 94936
96 Ga0209256_1001016 3300025299 Bacteria 33088
97 Ga0209257_1003220 3300025304 Bacteria 14396
98 Ga0209257_1006023 3300025304 Bacteria 8103
99 Ga0209257_1009620 3300025304 Bacteria 5120
100 Ga0207695_10004687 3300025913 Bacteria 18518
101 Ga0207649_10000226 3300025920 Bacteria 45943
102 Ga0207694_10020888 3300025924 Bacteria 4957
103 Ga0207711_10003611 3300025941 Bacteria 13375
104 Ga0207679_10000007 3300025945 Bacteria 460140
105 Ga0207639_10000287 3300026041 Bacteria 36044
106 Ga0207678_10000050 3300026067 Bacteria 90037
107 Ga0207702_10000896 3300026078 Bacteria 30934
108 Ga0207674_10004382 3300026116 Bacteria 17012
109 Ga0265319_1026716 3300028563 Bacteria 2053
110 Ga0307517_10000228 3300028786 Bacteria 94852
111 Ga0265338_10000087 3300028800 Bacteria 174926
112 Ga0265320_10012888 3300031240 Bacteria 4836
113 Ga0265331_10017102 3300031250 Bacteria 3791
114 Ga0265327_10000528 3300031251 Bacteria 65837
115 Ga0307509_10018787 3300031507 Bacteria 7913
116 Ga0307408_100002291 3300031548 Bacteria 13619
117 Ga0307408_100009724 3300031548 Bacteria 6337
118 Ga0307508_10029022 3300031616 Bacteria 5001
119 Ga0316578_10046720 3300031728 Bacteria 2524
120 Ga0307412_10000153 3300031911 Bacteria 49582
121 Ga0307409_100031366 3300031995 Bacteria 3835
122 Ga0307416_100001936 3300032002 Bacteria 11573
123 Ga0316582_0017716 3300036647 Bacteria 4128
124 Ga0316584_0133354 3300036712 Bacteria 1855
125 Ga0395900_0000555 3300037418 Bacteria 51872
126 Ga0395905_0000814 3300037471 Bacteria 40969
127 Ga0395905_0002532 3300037471 Bacteria 20167
128 Ga0395901_0117879 3300038443 Bacteria 2790
129 Ga0400490_58530 3300038726 Bacteria 12831
130 Ga0436361_0150195 3300039447 Bacteria 6647
131 Ga0436361_0169043 3300039447 Bacteria 13438
132 Ga0436361_0566317 3300039447 Bacteria 13879
133 Ga0436361_0602810 3300039447 Bacteria 15125
134 Ga0436361_1139539 3300039447 Bacteria 52229
135 Ga0466986_0000786 3300044650 Bacteria 12089
136 Ga0466972_0004821 3300044658 Bacteria 6764
137 Ga0453683_0123135 3300044673 Bacteria 1633
138 Ga0466965_0000883 3300044683 Bacteria 11451
139 Ga0466965_0009904 3300044683 Bacteria 4433
140 Ga0453684_0000691 3300044712 Bacteria 120087
141 Ga0453684_0001279 3300044712 Bacteria 75230
142 Ga0466970_0000053 3300044765 Bacteria 44072
143 Ga0466957_0004973 3300044842 Bacteria 7438
144 Ga0466957_0005056 3300044842 Bacteria 7381
145 Ga0451576_0032419 3300045051 Bacteria 5563
146 Ga0451576_0061801 3300045051 Bacteria 3906
147 Ga0495627_000046 3300046453 Bacteria 176186
148 Ga0495590_0000343 3300046457 Bacteria 24065
149 Ga0495629_0160077 3300046459 Bacteria 1564
150 Ga0495650_0000069 3300046471 Bacteria 261124
151 Ga0495580_0014224 3300046472 Bacteria 6042
152 Ga0495605_0000315 3300046474 Bacteria 50714
153 Ga0495585_0002307 3300046492 Bacteria 13743
154 Ga0495606_0038343 3300046507 Bacteria 3243
155 Ga0495648_0000240 3300046524 Bacteria 62286
156 Ga0495648_0016480 3300046524 Bacteria 5328
157 Ga0495597_0002594 3300046542 Bacteria 11293
158 Ga0495667_0154161 3300046559 Bacteria 1479
159 Ga0495668_0000267 3300046616 Bacteria 73569
160 Ga0495668_0000371 3300046616 Bacteria 59412
161 Ga0495668_0002340 3300046616 Bacteria 15788
162 Ga0495625_0000399 3300046660 Bacteria 66241
163 Ga0495625_0001032 3300046660 Bacteria 36658
164 Ga0495625_0002315 3300046660 Bacteria 20824
165 Ga0495599_0000165 3300046678 Bacteria 43569
166 Ga0495624_0107365 3300046690 Bacteria 1717
167 Ga0495670_0003583 3300046691 Bacteria 7624
168 Ga0495671_0000364 3300046692 Bacteria 37524
169 Ga0495660_0000249 3300046810 Bacteria 51995
170 Ga0495674_0051813 3300047319 Bacteria 3617
171 Ga0495672_0000309 3300047320 Bacteria 65507
172 Ga0495687_000958 3300047443 Bacteria 29622
173 Ga0495687_002673 3300047443 Bacteria 13880
174 Ga0495679_000384 3300047446 Bacteria 33903
175 Ga0495684_0004638 3300047471 Bacteria 10728
176 Ga0495602_0026240 3300048088 Bacteria 5622
177 Ga0495602_0032989 3300048088 Bacteria 4866
178 Ga0495602_0105321 3300048088 Bacteria 2305
179 Ga0496106_0000112 3300048909 Bacteria 62683
180 Ga0496106_0038064 3300048909 Bacteria 3599
181 Ga0496112_0002412 3300048915 Bacteria 15055
182 Ga0496118_0022305 3300048921 Bacteria 5542
183 Ga0496118_0055288 3300048921 Bacteria 2997
184 Ga0496121_0001593 3300048924 Bacteria 37759
185 Ga0496121_0001718 3300048924 Bacteria 35821
186 Ga0496123_0059015 3300048926 Bacteria 2484
187 Ga0496125_0000921 3300048928 Bacteria 46146
188 Ga0496126_0126436 3300048929 Bacteria 2212
189 Ga0501033_0029837 3300049570 Bacteria 4099
190 Ga0501034_0000094 3300049571 Bacteria 163124
191 Ga0501034_0000821 3300049571 Bacteria 46234
192 Ga0501043_0000089 3300049579 Bacteria 81412
193 Ga0501046_0000026 3300049580 Bacteria 197226
194 Ga0501047_0001799 3300049581 Bacteria 20753
195 Ga0501047_0054524 3300049581 Bacteria 3867
196 Ga0501047_0060288 3300049581 Bacteria 3662
197 Ga0501048_0005003 3300049582 Bacteria 10105
198 Ga0501070_0003035 3300049586 Bacteria 14623
199 Ga0501073_0039852 3300049589 Bacteria 3327
200 Ga0501223_000699 3300049663 Bacteria 7992
201 Ga0501235_000926 3300049669 Bacteria 6059
202 Ga0501225_0000339 3300049705 Bacteria 14720
203 Ga0501083_0000006 3300049744 Bacteria 199638
204 Ga0501262_000004 3300049759 Bacteria 46809
205 Ga0501262_000017 3300049759 Bacteria 25927
206 Ga0501035_0000003 3300049822 Bacteria 557461
207 Ga0501035_0066855 3300049822 Bacteria 3190
208 Ga0501035_0151233 3300049822 Bacteria 2014
209 Ga0501044_0000086 3300049823 Bacteria 114287
210 Ga0501044_0022565 3300049823 Bacteria 6706
211 Ga0501044_0053930 3300049823 Bacteria 4135
212 Ga0501045_0026664 3300049824 Bacteria 4158
213 nmdc:mga0k408_1191_c1 3300050493 Bacteria 14232
214 nmdc:mga0k408_314_c1 3300050493 Bacteria 26315
215 nmdc:mga0k408_798_c1 3300050493 Bacteria 17364
216 nmdc:mga07m45_19554_c1 3300050496 Bacteria 3670
217 Ga0500646_0000690 3300053090 Bacteria 9649
218 Ga0500651_0001055 3300053093 Bacteria 13597
219 Ga0500651_0015904 3300053093 Bacteria 4625
220 Ga0500562_002940 3300053108 Bacteria 4252
221 Ga0500607_000903 3300053121 Bacteria 28511
222 Ga0500614_006128 3300053123 Bacteria 2528
223 Ga0500559_0000034 3300053136 Bacteria 112152
224 Ga0500604_0000216 3300053151 Bacteria 16596
225 Ga0500616_0006265 3300053153 Bacteria 7837
226 Ga0500616_0013675 3300053153 Bacteria 4699
227 Ga0500645_002862 3300053730 Bacteria 7394
228 Ga0500609_000177 3300053731 Bacteria 8868

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046559 Ga0495667_0154161 Ga0495667_0154161_46_1464 472
2 3300044683 Ga0466965_0009904 Ga0466965_0009904_2353_3846 479
3 3300049571 Ga0501034_0000094 Ga0501034_0000094_161479_162972 481
4 3300025263 Ga0209565_1012662 Ga0209565_10126622 482
5 3300049822 Ga0501035_0066855 Ga0501035_0066855_53_1546 485
6 3300049589 Ga0501073_0039852 Ga0501073_0039852_1379_2974 493
7 iso_pu_bacteria 2904530477 2904533904 493
8 3300053093 Ga0500651_0001055 Ga0500651_0001055_4244_5731 494
9 3300002738 JGI25154J39366_1000530 JGI25154J39366_10005306 497
10 3300003758 Ga0055532_1000787 Ga0055532_10007873 497
11 3300003762 Ga0055542_1002232 Ga0055542_10022322 497
12 3300003841 Ga0055541_1000191 Ga0055541_10001915 497
13 3300005564 Ga0070664_100000021 Ga0070664_10000002187 497
14 3300005614 Ga0068856_100000127 Ga0068856_10000012716 497
15 3300009177 Ga0105248_10002520 Ga0105248_100025209 497
16 3300013100 Ga0157373_10001770 Ga0157373_1000177012 497
17 3300015265 Ga0182005_1001922 Ga0182005_10019225 497
18 3300025224 Ga0209784_100468 Ga0209784_10046811 497
19 3300025225 Ga0209566_101232 Ga0209566_1012326 497
20 3300025226 Ga0209674_100010 Ga0209674_100010614 497
21 3300025226 Ga0209674_100098 Ga0209674_10009811 497
22 3300025229 Ga0209147_100165 Ga0209147_1001657 497
23 3300025230 Ga0209563_100109 Ga0209563_10010954 497
24 3300025242 Ga0209258_100363 Ga0209258_10036356 497
25 3300025246 Ga0209646_1000082 Ga0209646_1000082164 497
26 3300025250 Ga0209026_1001459 Ga0209026_10014593 497
27 3300025254 Ga0209148_1000190 Ga0209148_100019096 497
28 3300025256 Ga0209759_1001802 Ga0209759_10018029 497
29 3300025920 Ga0207649_10000226 Ga0207649_1000022635 497
30 3300025945 Ga0207679_10000007 Ga0207679_10000007426 497
31 3300026067 Ga0207678_10000050 Ga0207678_1000005064 497
32 3300026078 Ga0207702_10000896 Ga0207702_1000089616 497
33 3300028800 Ga0265338_10000087 Ga0265338_1000008736 497
34 3300039447 Ga0436361_0150195 Ga0436361_0150195_76_1569 497
35 3300044683 Ga0466965_0000883 Ga0466965_0000883_6205_7698 497
36 3300044712 Ga0453684_0000691 Ga0453684_0000691_88517_90010 497
37 3300046459 Ga0495629_0160077 Ga0495629_0160077_39_1532 497
38 3300046492 Ga0495585_0002307 Ga0495585_0002307_10694_12187 497
39 3300046507 Ga0495606_0038343 Ga0495606_0038343_333_1826 497
40 3300046524 Ga0495648_0000240 Ga0495648_0000240_30689_32182 497
41 3300046616 Ga0495668_0000371 Ga0495668_0000371_36669_38162 497
42 3300046690 Ga0495624_0107365 Ga0495624_0107365_212_1705 497
43 3300046691 Ga0495670_0003583 Ga0495670_0003583_2895_4388 497
44 3300047446 Ga0495679_000384 Ga0495679_000384_1546_3039 497
45 3300048088 Ga0495602_0026240 Ga0495602_0026240_2070_3563 497
46 3300048909 Ga0496106_0000112 Ga0496106_0000112_669_2162 497
47 3300048915 Ga0496112_0002412 Ga0496112_0002412_13493_14986 497
48 3300048924 Ga0496121_0001593 Ga0496121_0001593_32304_33797 497
49 3300048924 Ga0496121_0001718 Ga0496121_0001718_29442_30935 497
50 3300048928 Ga0496125_0000921 Ga0496125_0000921_25548_27041 497
51 3300048929 Ga0496126_0126436 Ga0496126_0126436_139_1632 497
52 3300049823 Ga0501044_0053930 Ga0501044_0053930_1847_3412 497
53 3300050496 nmdc:mga07m45_19554_c1 nmdc:mga07m45_19554_c1_2165_3658 497
54 3300053090 Ga0500646_0000690 Ga0500646_0000690_3770_5269 497
55 3300053121 Ga0500607_000903 Ga0500607_000903_3224_4717 497
56 3300053151 Ga0500604_0000216 Ga0500604_0000216_3030_4523 497
57 3300038443 Ga0395901_0117879 Ga0395901_0117879_1002_2561 498
58 3300037471 Ga0395905_0002532 Ga0395905_0002532_8175_9734 499
59 3300025304 Ga0209257_1009620 Ga0209257_10096206 500
60 iso_pu_bacteria 8018845410 8018847049 501
61 3300046660 Ga0495625_0000399 Ga0495625_0000399_31883_33445 502
62 3300053093 Ga0500651_0015904 Ga0500651_0015904_581_2155 502
63 3300021361 Ga0213872_10001494 Ga0213872_100014948 503
64 3300039447 Ga0436361_0602810 Ga0436361_0602810_6003_7565 503
65 3300047443 Ga0495687_000958 Ga0495687_000958_12820_14385 503
66 3300049822 Ga0501035_0151233 Ga0501035_0151233_394_1953 504
67 3300009148 Ga0105243_10010334 Ga0105243_100103343 505
68 3300025256 Ga0209759_1001777 Ga0209759_10017776 505
69 3300048088 Ga0495602_0032989 Ga0495602_0032989_2665_4230 506
70 3300013100 Ga0157373_10000865 Ga0157373_1000086517 508
71 3300036712 Ga0316584_0133354 Ga0316584_0133354_229_1764 508
72 3300044842 Ga0466957_0005056 Ga0466957_0005056_3206_4771 508
73 3300053153 Ga0500616_0013675 Ga0500616_0013675_860_2386 508
74 iso_pu_bacteria 2738543015 2739258468 508
75 3300005288 Ga0065714_10065347 Ga0065714_1006534710 509
76 3300003841 Ga0055541_1000136 Ga0055541_10001367 510
77 3300025225 Ga0209566_100110 Ga0209566_10011050 510
78 3300053731 Ga0500609_000177 Ga0500609_000177_3762_5324 510
79 3300002067 JGI24735J21928_10001214 JGI24735J21928_100012147 511
80 3300002738 JGI25154J39366_1000250 JGI25154J39366_100025025 511
81 3300003794 Ga0055531_10008218 Ga0055531_100082182 511
82 3300009551 Ga0105238_10027315 Ga0105238_100273154 511
83 3300025206 Ga0209435_100103 Ga0209435_1001032 511
84 3300025246 Ga0209646_1000342 Ga0209646_10003422 511
85 3300025250 Ga0209026_1001136 Ga0209026_10011369 511
86 3300025256 Ga0209759_1000607 Ga0209759_10006072 511
87 3300025304 Ga0209257_1006023 Ga0209257_100602310 511
88 3300025924 Ga0207694_10020888 Ga0207694_100208882 511
89 3300048921 Ga0496118_0055288 Ga0496118_0055288_299_1864 511
90 3300044842 Ga0466957_0004973 Ga0466957_0004973_4282_5847 512
91 3300046660 Ga0495625_0001032 Ga0495625_0001032_28670_30232 512
92 iso_pu_bacteria 8057101203 8057105862 512
93 3300003187 JGI25151J46595_10022420 JGI25151J46595_100224202 514
94 3300025245 Ga0207425_1000216 Ga0207425_100021621 514
95 3300025294 Ga0209025_1020821 Ga0209025_10208212 514
96 3300025297 Ga0209758_1002142 Ga0209758_100214220 514
97 3300038726 Ga0400490_58530 Ga0400490_58530_2287_3861 514
98 3300046453 Ga0495627_000046 Ga0495627_000046_157142_158704 514
99 3300047320 Ga0495672_0000309 Ga0495672_0000309_26973_28550 514
100 3300049663 Ga0501223_000699 Ga0501223_000699_2534_4096 514
101 iso_pu_bacteria 2585428106 2587918077 514
102 iso_pu_bacteria 2643221552 2643782236 514
103 iso_pu_bacteria 2643221592 2643967058 514
104 3300046542 Ga0495597_0002594 Ga0495597_0002594_9312_10898 515
105 3300046678 Ga0495599_0000165 Ga0495599_0000165_36839_38404 515
106 3300048088 Ga0495602_0105321 Ga0495602_0105321_440_2005 515
107 3300049571 Ga0501034_0000821 Ga0501034_0000821_8136_9686 515
108 3300049579 Ga0501043_0000089 Ga0501043_0000089_6662_8251 515
109 3300049581 Ga0501047_0060288 Ga0501047_0060288_1597_3186 515
110 3300049586 Ga0501070_0003035 Ga0501070_0003035_146_1735 515
111 3300049822 Ga0501035_0000003 Ga0501035_0000003_308703_310292 515
112 iso_pu_bacteria 2643221569 2643861568 515
113 iso_pu_bacteria 2928058823 2928060887 515
114 3300031250 Ga0265331_10017102 Ga0265331_100171023 516
115 3300044673 Ga0453683_0123135 Ga0453683_0123135_15_1577 516
116 3300044712 Ga0453684_0001279 Ga0453684_0001279_55847_57409 516
117 3300028563 Ga0265319_1026716 Ga0265319_10267162 517
118 3300031240 Ga0265320_10012888 Ga0265320_100128883 517
119 3300031995 Ga0307409_100031366 Ga0307409_1000313663 517
120 3300046457 Ga0495590_0000343 Ga0495590_0000343_1344_2900 517
121 3300046660 Ga0495625_0002315 Ga0495625_0002315_7293_8849 517
122 3300049580 Ga0501046_0000026 Ga0501046_0000026_43003_44565 517
123 3300049581 Ga0501047_0001799 Ga0501047_0001799_4324_5886 517
124 3300049582 Ga0501048_0005003 Ga0501048_0005003_6942_8504 517
125 3300049744 Ga0501083_0000006 Ga0501083_0000006_99364_100926 517
126 3300049823 Ga0501044_0022565 Ga0501044_0022565_4075_5637 517
127 3300049824 Ga0501045_0026664 Ga0501045_0026664_1126_2688 517
128 3300053108 Ga0500562_002940 Ga0500562_002940_753_2309 517
129 3300053123 Ga0500614_006128 Ga0500614_006128_83_1639 517
130 iso_pu_bacteria 2744054900 2746086643 517
131 iso_pu_bacteria 2744054901 2746094042 517
132 iso_pu_bacteria 2818991450 2819624139 517
133 iso_pu_bacteria 2904615490 2904620012 517
134 iso_pu_bacteria 2928135762 2928141796 517
135 iso_pu_bacteria 8020807995 8020812966 517
136 iso_pu_bacteria 8040173305 8040178473 517
137 3300021361 Ga0213872_10001705 Ga0213872_100017054 518
138 3300025299 Ga0209256_1001016 Ga0209256_100101613 518
139 3300025304 Ga0209257_1003220 Ga0209257_100322017 518
140 3300039447 Ga0436361_0566317 Ga0436361_0566317_1971_3533 518
141 3300046471 Ga0495650_0000069 Ga0495650_0000069_78191_79750 518
142 3300046524 Ga0495648_0016480 Ga0495648_0016480_1923_3482 518
143 3300046616 Ga0495668_0000267 Ga0495668_0000267_11558_13117 518
144 3300046616 Ga0495668_0002340 Ga0495668_0002340_3186_4745 518
145 3300047319 Ga0495674_0051813 Ga0495674_0051813_79_1647 518
146 3300047471 Ga0495684_0004638 Ga0495684_0004638_127_1695 518
147 3300049669 Ga0501235_000926 Ga0501235_000926_2584_4146 518
148 3300003752 Ga0055539_1000056 Ga0055539_100005671 519
149 3300003756 Ga0055533_1000402 Ga0055533_100040215 519
150 3300003758 Ga0055532_1000111 Ga0055532_10001115 519
151 3300003759 Ga0055525_1000529 Ga0055525_100052916 519
152 3300003759 Ga0055525_1000583 Ga0055525_10005839 519
153 3300003760 Ga0055527_1001125 Ga0055527_10011255 519
154 3300003761 Ga0055535_1000114 Ga0055535_10001145 519
155 3300003763 Ga0055529_1000179 Ga0055529_10001795 519
156 3300005577 Ga0068857_100001627 Ga0068857_10000162717 519
157 3300009093 Ga0105240_10004966 Ga0105240_100049664 519
158 3300013104 Ga0157370_10000219 Ga0157370_1000021913 519
159 3300013105 Ga0157369_10074734 Ga0157369_100747341 519
160 3300025224 Ga0209784_100006 Ga0209784_100006523 519
161 3300025225 Ga0209566_100002 Ga0209566_100002523 519
162 3300025226 Ga0209674_100060 Ga0209674_100060218 519
163 3300025228 Ga0209672_101675 Ga0209672_1016755 519
164 3300025229 Ga0209147_100015 Ga0209147_1000154 519
165 3300025242 Ga0209258_100021 Ga0209258_1000214 519
166 3300025253 Ga0209677_100007 Ga0209677_100007523 519
167 3300025256 Ga0209759_1001449 Ga0209759_100144911 519
168 3300025272 Ga0209455_1000028 Ga0209455_10000284 519
169 3300025913 Ga0207695_10004687 Ga0207695_1000468717 519
170 3300026116 Ga0207674_10004382 Ga0207674_100043828 519
171 3300044650 Ga0466986_0000786 Ga0466986_0000786_9132_10691 519
172 3300044658 Ga0466972_0004821 Ga0466972_0004821_3563_5122 519
173 3300001915 JGI24741J21665_1000539 JGI24741J21665_10005398 521
174 3300001979 JGI24740J21852_10000160 JGI24740J21852_100001608 521
175 3300002704 JGI25155J39150_1000310 JGI25155J39150_100031013 521
176 3300002705 JGI25156J39149_1000764 JGI25156J39149_10007645 521
177 3300003751 Ga0055538_1000410 Ga0055538_100041015 521
178 3300003756 Ga0055533_1001122 Ga0055533_10011225 521
179 3300003771 Ga0055526_1000321 Ga0055526_100032123 521
180 3300003773 Ga0055537_1000119 Ga0055537_100011929 521
181 3300003775 Ga0055524_1005254 Ga0055524_10052545 521
182 3300003784 Ga0055534_1000047 Ga0055534_100004723 521
183 3300003790 Ga0055528_1000049 Ga0055528_100004944 521
184 3300003790 Ga0055528_1000272 Ga0055528_100027226 521
185 3300003841 Ga0055541_1000305 Ga0055541_10003052 521
186 3300005344 Ga0070661_100000142 Ga0070661_10000014237 521
187 3300005455 Ga0070663_100000021 Ga0070663_10000002187 521
188 3300005539 Ga0068853_100000280 Ga0068853_1000002803 521
189 3300006195 Ga0075366_10000206 Ga0075366_1000020621 521
190 3300006195 Ga0075366_10000624 Ga0075366_100006244 521
191 3300006195 Ga0075366_10000926 Ga0075366_100009266 521
192 3300006948 Ga0099826_10070783 Ga0099826_100707832 521
193 3300013102 Ga0157371_10000072 Ga0157371_10000072134 521
194 3300013102 Ga0157371_10050681 Ga0157371_100506811 521
195 3300013307 Ga0157372_10000309 Ga0157372_1000030933 521
196 3300021361 Ga0213872_10000108 Ga0213872_1000010848 521
197 3300025225 Ga0209566_100110 Ga0209566_10011094 521
198 3300025250 Ga0209026_1001574 Ga0209026_10015745 521
199 3300025253 Ga0209677_102889 Ga0209677_1028894 521
200 3300025256 Ga0209759_1000092 Ga0209759_1000092145 521
201 3300025261 Ga0209233_1002486 Ga0209233_10024864 521
202 3300025263 Ga0209565_1000112 Ga0209565_100011245 521
203 3300025273 Ga0209673_1000210 Ga0209673_100021042 521
204 3300025291 Ga0209675_1000142 Ga0209675_100014220 521
205 3300025295 Ga0209564_1000245 Ga0209564_100024541 521
206 3300025299 Ga0209256_1000252 Ga0209256_100025220 521
207 3300025941 Ga0207711_10003611 Ga0207711_1000361111 521
208 3300026041 Ga0207639_10000287 Ga0207639_100002872 521
209 3300028786 Ga0307517_10000228 Ga0307517_1000022886 521
210 3300031251 Ga0265327_10000528 Ga0265327_1000052817 521
211 3300031507 Ga0307509_10018787 Ga0307509_100187877 521
212 3300031548 Ga0307408_100002291 Ga0307408_1000022914 521
213 3300031548 Ga0307408_100009724 Ga0307408_1000097245 521
214 3300031616 Ga0307508_10029022 Ga0307508_100290223 521
215 3300031728 Ga0316578_10046720 Ga0316578_100467201 521
216 3300031911 Ga0307412_10000153 Ga0307412_1000015320 521
217 3300032002 Ga0307416_100001936 Ga0307416_1000019363 521
218 3300036647 Ga0316582_0017716 Ga0316582_0017716_895_2484 521
219 3300037418 Ga0395900_0000555 Ga0395900_0000555_11525_13093 521
220 3300037471 Ga0395905_0000814 Ga0395905_0000814_10865_12430 521
221 3300039447 Ga0436361_0169043 Ga0436361_0169043_8666_10231 521
222 3300039447 Ga0436361_1139539 Ga0436361_1139539_10838_12412 521
223 3300044765 Ga0466970_0000053 Ga0466970_0000053_35016_36581 521
224 3300045051 Ga0451576_0032419 Ga0451576_0032419_1599_3260 521
225 3300045051 Ga0451576_0061801 Ga0451576_0061801_1203_2771 521
226 3300046472 Ga0495580_0014224 Ga0495580_0014224_2023_3588 521
227 3300046474 Ga0495605_0000315 Ga0495605_0000315_44674_46248 521
228 3300046692 Ga0495671_0000364 Ga0495671_0000364_22350_23915 521
229 3300046810 Ga0495660_0000249 Ga0495660_0000249_33080_34645 521
230 3300047320 Ga0495672_0000309 Ga0495672_0000309_36600_38252 521
231 3300047443 Ga0495687_002673 Ga0495687_002673_3125_4690 521
232 3300048909 Ga0496106_0038064 Ga0496106_0038064_688_2253 521
233 3300048921 Ga0496118_0022305 Ga0496118_0022305_1202_2767 521
234 3300048926 Ga0496123_0059015 Ga0496123_0059015_220_1794 521
235 3300049570 Ga0501033_0029837 Ga0501033_0029837_1072_2637 521
236 3300049581 Ga0501047_0054524 Ga0501047_0054524_572_2137 521
237 3300049705 Ga0501225_0000339 Ga0501225_0000339_4049_5614 521
238 3300049759 Ga0501262_000004 Ga0501262_000004_33916_35481 521
239 3300049759 Ga0501262_000017 Ga0501262_000017_3821_5386 521
240 3300049823 Ga0501044_0000086 Ga0501044_0000086_8787_10352 521
241 3300050493 nmdc:mga0k408_1191_c1 nmdc:mga0k408_1191_c1_7414_8979 521
242 3300050493 nmdc:mga0k408_314_c1 nmdc:mga0k408_314_c1_4066_5631 521
243 3300050493 nmdc:mga0k408_798_c1 nmdc:mga0k408_798_c1_12409_13974 521
244 3300053136 Ga0500559_0000034 Ga0500559_0000034_82721_84301 521
245 3300053153 Ga0500616_0006265 Ga0500616_0006265_6051_7649 521
246 3300053730 Ga0500645_002862 Ga0500645_002862_2256_3821 521

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07508

Recombinase

Recombinase

266

371

0.97

PF00239

Resolvase

Resolvase, N terminal domain

86

216

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lhk-assembly1.cif.gz_B crystal structure of putative dna binding protein from methanocaldococcus jannaschii. 0.7202 18 148
3bvp-assembly1.cif.gz_B-2 crystal structure of the n-terminal catalytic domain of tp901-1 integrase 0.7134 18 154
3bvp-assembly1.cif.gz_A-2 crystal structure of the n-terminal catalytic domain of tp901-1 integrase 0.7106 18 151
3guv-assembly1.cif.gz_A-2 crystal structure of a resolvase family site-specific recombinase from streptococcus pneumoniae 0.7088 16 145
5dte-assembly3.cif.gz_C crystal structure of an abc transporter periplasmic solute binding protein (ipr025997) from actinobacillus succinogenes 130z(asuc_0081, target efi-511065) with bound d-allose 0.7032 16 122
ID Description Score Start End Superfamily
6dgcA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Resolvase, N-terminal catalytic domain 0.8625 17 125 3.40.50.1390
6dgcA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Resolvase, N-terminal catalytic domain 0.8551 17 125 3.40.50.1390
3lhkD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Resolvase, N-terminal catalytic domain 0.8191 18 125 3.40.50.1390
3lhkD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Resolvase, N-terminal catalytic domain 0.8046 18 125 3.40.50.1390
6dgbB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Resolvase, N-terminal catalytic domain 0.8004 19 123 3.40.50.1390
ID Description Score Start End GO Terms
AF-A0A378MWD3-F1-model_v4 Integrase 0.9338 413 513
AF-V7FRY6-F1-model_v4 Uncharacterized protein 0.9238 177 251
AF-A0A5R2N0L4-F1-model_v4 Recombinase family protein 0.9173 185 315 GO:0000150
GO:0003677
AF-A0A2U3LN66-F1-model_v4 Site-specific recombinase, DNA invertase Pin 0.9164 217 321 GO:0000150
GO:0003677
AF-A0A0R2C9H1-F1-model_v4 Site-specific recombinase 0.9162 209 322 GO:0000150
GO:0003677

Feature Viewer

pLDDT pTM Quality
80.66 0.66 Medium
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Predicted Structure (AlphaFold2)

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