F357231

General Info

Members Datasets Scaffolds Average Seq Length
245 145 245 231

Family's Representative Sequence

Representative Sequence 3300006173|Ga0070716_100308276|Ga0070716_1003082762
Length 248
Sequence MNAHATKAPSVKAPSMTEGADPATVLVVEDDASLNAALAATLKAAGFRPVTARTAAEGLRWFNHYAPDLVLLDLGLPDRDGLSVIAAIREKGQTPIVVLSAREAQAMKVEALDLGADDYVQKPFGVEELLARIRAGLRHGVQARGSAPVVRTGDLEIDLGLRLVSKAGEALKLSPKEYDLLAELAVNLGGAVGHRALLAAVWGSERADIQYLRVYVGQLRQKLGTFAGAPLLVSEPGVGYRLAKMSHT

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
90 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
91 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
92 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
93 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
94 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
95 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
96 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
97 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
98 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
106 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
107 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
125 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
126 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
127 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
128 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
139 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
140 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
141 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
142 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
143 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
144 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
145 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.08
Nodule 0
Rhizoplane 2.04
Rhizosphere 90.61
Stem 0
Stem Tuber 0
Unclassified 3.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10382497 3300003322 Bacteria 1488
2 rootH1_10095626 3300003323 Unclassified 3123
3 Ga0065165_1027507 3300005262 Bacteria 1853
4 Ga0065704_10117939 3300005289 Unclassified 1825
5 Ga0065707_10114261 3300005295 Unclassified 2302
6 Ga0070658_10109947 3300005327 Bacteria 2282
7 Ga0070658_10141012 3300005327 Bacteria 2013
8 Ga0070670_100000039 3300005331 Bacteria 152618
9 Ga0070666_10296063 3300005335 Bacteria 1152
10 Ga0070680_100067503 3300005336 Bacteria 2933
11 Ga0070680_100107329 3300005336 Bacteria 2322
12 Ga0070680_100502130 3300005336 Bacteria 1038
13 Ga0070660_100060789 3300005339 Bacteria 2933
14 Ga0070660_100203184 3300005339 Bacteria 1607
15 Ga0070691_10041065 3300005341 Bacteria 2187
16 Ga0070668_100000155 3300005347 Bacteria 43650
17 Ga0070668_100001488 3300005347 Bacteria 16920
18 Ga0070668_100001526 3300005347 Bacteria 16698
19 Ga0070669_100002380 3300005353 Bacteria 13603
20 Ga0070669_100203933 3300005353 Bacteria 1557
21 Ga0070675_100581918 3300005354 Bacteria 1014
22 Ga0070671_100001863 3300005355 Bacteria 16101
23 Ga0070659_100001826 3300005366 Bacteria 15326
24 Ga0070659_100009186 3300005366 Bacteria 7254
25 Ga0070667_100000231 3300005367 Bacteria 63589
26 Ga0070667_100007110 3300005367 Bacteria 9308
27 Ga0070667_100011509 3300005367 Bacteria 7318
28 Ga0070681_10019245 3300005458 Bacteria 6831
29 Ga0070681_10091156 3300005458 Bacteria 2998
30 Ga0070679_100022788 3300005530 Bacteria 6125
31 Ga0070679_100058191 3300005530 Bacteria 3851
32 Ga0070679_100521601 3300005530 Bacteria 1132
33 Ga0068853_100003369 3300005539 Bacteria 12231
34 Ga0068853_100027005 3300005539 Bacteria 4824
35 Ga0068853_100168649 3300005539 Bacteria 1980
36 Ga0070672_100382260 3300005543 Bacteria 1204
37 Ga0070665_100001079 3300005548 Bacteria 33925
38 Ga0070665_100002798 3300005548 Bacteria 18908
39 Ga0070665_100010387 3300005548 Bacteria 9421
40 Ga0068855_100012737 3300005563 Bacteria 10143
41 Ga0068855_100237381 3300005563 Bacteria 2038
42 Ga0068855_100305286 3300005563 Bacteria 1762
43 Ga0068857_100305072 3300005577 Bacteria 1468
44 Ga0068854_100180770 3300005578 Bacteria 1647
45 Ga0068856_100061362 3300005614 Bacteria 3714
46 Ga0068856_100565153 3300005614 Bacteria 1159
47 Ga0068859_100001153 3300005617 Bacteria 26984
48 Ga0068859_100164037 3300005617 Bacteria 2301
49 Ga0068859_100285837 3300005617 Bacteria 1742
50 Ga0068864_100000068 3300005618 Bacteria 115507
51 Ga0068861_100007558 3300005719 Bacteria 7457
52 Ga0068863_100000758 3300005841 Bacteria 32348
53 Ga0068863_100057611 3300005841 Bacteria 3677
54 Ga0068858_100003007 3300005842 Bacteria 16907
55 Ga0068858_100141667 3300005842 Bacteria 2257
56 Ga0068860_100000303 3300005843 Bacteria 68443
57 Ga0068860_100046679 3300005843 Bacteria 4130
58 Ga0068860_100242551 3300005843 Bacteria 1753
59 Ga0068862_100000910 3300005844 Bacteria 28660
60 Ga0068862_100174258 3300005844 Bacteria 1927
61 Ga0068862_100274768 3300005844 Bacteria 1542
62 Ga0081455_10003258 3300005937 Bacteria 18798
63 Ga0075363_100051959 3300006048 Bacteria 2187
64 Ga0070716_100308276 3300006173 Bacteria 1104
65 Ga0075430_100051722 3300006846 Bacteria 3461
66 Ga0068865_100003446 3300006881 Bacteria 9469
67 Ga0068865_100365515 3300006881 Bacteria 1173
68 Ga0097620_100001153 3300006931 Bacteria 26984
69 Ga0097620_100164031 3300006931 Bacteria 2301
70 Ga0097620_100285853 3300006931 Bacteria 1742
71 Ga0105240_10000500 3300009093 Bacteria 72286
72 Ga0105240_10004167 3300009093 Bacteria 22157
73 Ga0105240_10053463 3300009093 Bacteria 5069
74 Ga0105240_10173915 3300009093 Bacteria 2547
75 Ga0105240_11037929 3300009093 Bacteria 875
76 Ga0111539_10349665 3300009094 Bacteria 1720
77 Ga0105245_10831351 3300009098 Bacteria 963
78 Ga0105247_10293263 3300009101 Bacteria 1126
79 Ga0105242_10073180 3300009176 Bacteria 2848
80 Ga0105248_10002464 3300009177 Bacteria 20562
81 Ga0105248_10004208 3300009177 Bacteria 15919
82 Ga0105248_10037264 3300009177 Bacteria 5441
83 Ga0105248_10385628 3300009177 Bacteria 1578
84 Ga0105237_10289005 3300009545 Bacteria 1642
85 Ga0105238_10016306 3300009551 Bacteria 7520
86 Ga0105238_10020124 3300009551 Bacteria 6792
87 Ga0105249_10001383 3300009553 Bacteria 21239
88 Ga0105239_10092056 3300010375 Bacteria 3346
89 Ga0105239_10307365 3300010375 Bacteria 1786
90 Ga0105239_11121766 3300010375 Bacteria 906
91 Ga0163162_10315450 3300013306 Bacteria 1696
92 Ga0163163_10014927 3300014325 Bacteria 7157
93 Ga0163163_10039039 3300014325 Bacteria 4631
94 Ga0163163_10048064 3300014325 Bacteria 4194
95 Ga0163163_10097561 3300014325 Bacteria 2959
96 Ga0157380_10000814 3300014326 Bacteria 19552
97 Ga0157379_10019744 3300014968 Bacteria 5955
98 Ga0157379_10104681 3300014968 Bacteria 2540
99 Ga0207680_10010816 3300025903 Bacteria 4581
100 Ga0207680_10500074 3300025903 Bacteria 866
101 Ga0207705_10000943 3300025909 Bacteria 23748
102 Ga0207654_10377430 3300025911 Bacteria 981
103 Ga0207695_10003336 3300025913 Bacteria 22735
104 Ga0207695_10004414 3300025913 Bacteria 19216
105 Ga0207695_10011137 3300025913 Bacteria 10914
106 Ga0207695_10117072 3300025913 Bacteria 2638
107 Ga0207695_10178639 3300025913 Bacteria 2044
108 Ga0207671_10452057 3300025914 Bacteria 1023
109 Ga0207660_10000234 3300025917 Bacteria 35837
110 Ga0207660_10235025 3300025917 Bacteria 1442
111 Ga0207657_10009357 3300025919 Bacteria 9859
112 Ga0207657_10221415 3300025919 Bacteria 1516
113 Ga0207649_10118894 3300025920 Bacteria 1778
114 Ga0207681_10025765 3300025923 Bacteria 3786
115 Ga0207694_10030954 3300025924 Bacteria 4086
116 Ga0207694_10035870 3300025924 Bacteria 3804
117 Ga0207650_10000161 3300025925 Bacteria 81097
118 Ga0207659_10616349 3300025926 Bacteria 926
119 Ga0207644_10005164 3300025931 Bacteria 8528
120 Ga0207690_10000250 3300025932 Bacteria 39031
121 Ga0207670_10307813 3300025936 Bacteria 1243
122 Ga0207704_10006105 3300025938 Bacteria 5588
123 Ga0207691_10302334 3300025940 Bacteria 1374
124 Ga0207711_10000743 3300025941 Bacteria 31975
125 Ga0207711_10045815 3300025941 Bacteria 3737
126 Ga0207711_10369018 3300025941 Bacteria 1331
127 Ga0207689_10461888 3300025942 Bacteria 1062
128 Ga0207712_10002339 3300025961 Bacteria 12295
129 Ga0207668_10000587 3300025972 Bacteria 22645
130 Ga0207668_10000920 3300025972 Bacteria 17748
131 Ga0207668_10049739 3300025972 Bacteria 2883
132 Ga0207640_10205462 3300025981 Bacteria 1496
133 Ga0207658_10000791 3300025986 Bacteria 26889
134 Ga0207658_10004912 3300025986 Bacteria 9221
135 Ga0207658_10011887 3300025986 Bacteria 5934
136 Ga0207703_10012980 3300026035 Bacteria 6491
137 Ga0207639_10008446 3300026041 Bacteria 7058
138 Ga0207639_10111211 3300026041 Bacteria 2233
139 Ga0207639_10512956 3300026041 Bacteria 1097
140 Ga0207639_10544882 3300026041 Bacteria 1065
141 Ga0207639_10794582 3300026041 Bacteria 882
142 Ga0207639_10881109 3300026041 Bacteria 836
143 Ga0207702_10165355 3300026078 Bacteria 2023
144 Ga0207702_10620988 3300026078 Bacteria 1061
145 Ga0207641_10001619 3300026088 Bacteria 21967
146 Ga0207641_10002650 3300026088 Bacteria 16363
147 Ga0207676_10000127 3300026095 Bacteria 66733
148 Ga0207676_10238550 3300026095 Bacteria 1630
149 Ga0207675_100013915 3300026118 Bacteria 7501
150 Ga0207675_100093262 3300026118 Bacteria 2832
151 Ga0207683_10809673 3300026121 Bacteria 869
152 Ga0207698_10324779 3300026142 Bacteria 1443
153 Ga0209983_1027412 3300027665 Bacteria 1206
154 Ga0268266_10000005 3300028379 Bacteria 1448194
155 Ga0268266_10021190 3300028379 Bacteria 5537
156 Ga0268266_10040432 3300028379 Bacteria 3974
157 Ga0268265_10002255 3300028380 Bacteria 14751
158 Ga0268265_10019856 3300028380 Bacteria 4680
159 Ga0268265_10340129 3300028380 Bacteria 1366
160 Ga0268264_10000059 3300028381 Bacteria 306927
161 Ga0268264_10009512 3300028381 Bacteria 8050
162 Ga0268264_10834837 3300028381 Bacteria 922
163 Ga0265319_1002855 3300028563 Bacteria 9235
164 Ga0265319_1004676 3300028563 Bacteria 6715
165 Ga0265319_1027296 3300028563 Bacteria 2027
166 Ga0265334_10001015 3300028573 Bacteria 13861
167 Ga0265318_10009307 3300028577 Bacteria 4326
168 Ga0265318_10027424 3300028577 Bacteria 2238
169 Ga0265336_10005158 3300028666 Bacteria 4855
170 Ga0265336_10037509 3300028666 Bacteria 1489
171 Ga0265338_10047202 3300028800 Bacteria 3936
172 Ga0265338_10052543 3300028800 Bacteria 3654
173 Ga0265338_10279260 3300028800 Bacteria 1221
174 Ga0265324_10016182 3300029957 Bacteria 2729
175 Ga0265325_10016754 3300031241 Bacteria 4090
176 Ga0265325_10150162 3300031241 Bacteria 1102
177 Ga0265329_10011099 3300031242 Bacteria 3281
178 Ga0265340_10002055 3300031247 Bacteria 11527
179 Ga0265339_10041053 3300031249 Bacteria 2570
180 Ga0265339_10067361 3300031249 Bacteria 1915
181 Ga0265339_10081075 3300031249 Bacteria 1715
182 Ga0265331_10038560 3300031250 Bacteria 2335
183 Ga0265316_10032275 3300031344 Bacteria 4274
184 Ga0265316_10098353 3300031344 Bacteria 2227
185 Ga0307513_10211882 3300031456 Bacteria 1768
186 Ga0307513_10358022 3300031456 Bacteria 1205
187 Ga0307509_10001479 3300031507 Bacteria 39686
188 Ga0265314_10010241 3300031711 Bacteria 7842
189 Ga0265314_10031409 3300031711 Bacteria 3921
190 Ga0265342_10045282 3300031712 Bacteria 2649
191 Ga0373944_0017456 3300035089 Bacteria 2038
192 Ga0373936_0009874 3300035113 Bacteria 3603
193 Ga0373927_0000947 3300035695 Bacteria 22105
194 Ga0373937_0397326 3300036401 Bacteria 1308
195 Ga0373925_0000760 3300037068 Bacteria 29657
196 Ga0373925_0128560 3300037068 Bacteria 1973
197 Ga0395899_0000847 3300037312 Bacteria 29441
198 Ga0395900_0000016 3300037418 Bacteria 382407
199 Ga0395898_0015631 3300037466 Bacteria 7779
200 Ga0395898_0409779 3300037466 Bacteria 1292
201 Ga0395905_0008634 3300037471 Bacteria 10037
202 Ga0395905_0022481 3300037471 Bacteria 5963
203 Ga0395905_0170850 3300037471 Bacteria 2042
204 Ga0395905_0410077 3300037471 Bacteria 1250
205 Ga0395901_0000028 3300038443 Bacteria 242653
206 Ga0395901_0428213 3300038443 Bacteria 1356
207 Ga0395901_0481787 3300038443 Bacteria 1265
208 Ga0400483_234993 3300039062 Bacteria 2000
209 Ga0495629_0020456 3300046459 Bacteria 4726
210 Ga0495638_0000590 3300046460 Bacteria 40980
211 Ga0495638_0078571 3300046460 Bacteria 2008
212 Ga0495653_0044763 3300046463 Bacteria 3434
213 Ga0495630_0264800 3300046517 Bacteria 1313
214 Ga0495645_0214286 3300046543 Bacteria 1299
215 Ga0495667_0167347 3300046559 Bacteria 1413
216 Ga0495625_0010034 3300046660 Bacteria 7872
217 Ga0495635_0056573 3300046663 Bacteria 2700
218 Ga0495599_0154542 3300046678 Bacteria 1420
219 Ga0495669_0000009 3300046684 Bacteria 165516
220 Ga0495672_0120955 3300047320 Unclassified 1392
221 Ga0495593_0228484 3300047673 Bacteria 933
222 Ga0496101_0077540 3300048904 Bacteria 2449
223 Ga0496112_0007341 3300048915 Bacteria 9780
224 Ga0496115_0000433 3300048918 Bacteria 33940
225 Ga0496115_0001846 3300048918 Bacteria 15154
226 Ga0496115_0289760 3300048918 Bacteria 1343
227 Ga0496118_0174898 3300048921 Unclassified 1306
228 Ga0496121_0170660 3300048924 Unclassified 1580
229 Ga0501047_0001157 3300049581 Bacteria 26178
230 Ga0501047_0024591 3300049581 Bacteria 5782
231 Ga0501047_0221583 3300049581 Bacteria 1748
232 Ga0501047_0790113 3300049581 Bacteria 764
233 Ga0501067_0009469 3300049583 Bacteria 5397
234 Ga0501080_0591334 3300049742 Bacteria 986
235 nmdc:mga03n38_203769_c1 3300050490 Bacteria 1025
236 nmdc:mga0qj67_148333_c1 3300050509 Bacteria 1902
237 nmdc:mga0qj67_44879_c1 3300050509 Bacteria 3486
238 Ga0495619_0398037 3300053085 Bacteria 951
239 Ga0500643_006997 3300053087 Bacteria 4627
240 Ga0500647_0127433 3300053091 Bacteria 1201
241 Ga0500555_000714 3300053103 Bacteria 12489
242 Ga0500556_0004865 3300053104 Bacteria 3806
243 Ga0500572_000813 3300053111 Bacteria 9889
244 Ga0500616_0080822 3300053153 Bacteria 1634
245 Ga0500552_002832 3300053733 Bacteria 1718

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300027665 Ga0209983_1027412 Ga0209983_10274122 212
2 3300031456 Ga0307513_10211882 Ga0307513_102118822 215
3 3300049742 Ga0501080_0591334 Ga0501080_0591334_237_971 216
4 3300005719 Ga0068861_100007558 Ga0068861_1000075582 217
5 3300026118 Ga0207675_100013915 Ga0207675_1000139156 217
6 3300026118 Ga0207675_100093262 Ga0207675_1000932623 217
7 3300039062 Ga0400483_234993 Ga0400483_234993_74_760 218
8 3300049583 Ga0501067_0009469 Ga0501067_0009469_378_1094 219
9 3300006881 Ga0068865_100365515 Ga0068865_1003655152 220
10 3300037471 Ga0395905_0170850 Ga0395905_0170850_629_1315 220
11 3300005335 Ga0070666_10296063 Ga0070666_102960631 221
12 3300005347 Ga0070668_100001526 Ga0070668_1000015262 221
13 3300005353 Ga0070669_100002380 Ga0070669_1000023806 221
14 3300005355 Ga0070671_100001863 Ga0070671_1000018635 221
15 3300005367 Ga0070667_100011509 Ga0070667_1000115093 221
16 3300005530 Ga0070679_100521601 Ga0070679_1005216011 221
17 3300005539 Ga0068853_100027005 Ga0068853_1000270053 221
18 3300005563 Ga0068855_100305286 Ga0068855_1003052862 221
19 3300005617 Ga0068859_100001153 Ga0068859_10000115321 221
20 3300005841 Ga0068863_100057611 Ga0068863_1000576112 221
21 3300005842 Ga0068858_100003007 Ga0068858_10000300717 221
22 3300005843 Ga0068860_100046679 Ga0068860_1000466792 221
23 3300006846 Ga0075430_100051722 Ga0075430_1000517222 221
24 3300006931 Ga0097620_100001153 Ga0097620_10000115321 221
25 3300009177 Ga0105248_10004208 Ga0105248_1000420810 221
26 3300010375 Ga0105239_11121766 Ga0105239_111217662 221
27 3300014325 Ga0163163_10014927 Ga0163163_100149276 221
28 3300014968 Ga0157379_10104681 Ga0157379_101046812 221
29 3300025903 Ga0207680_10500074 Ga0207680_105000741 221
30 3300025923 Ga0207681_10025765 Ga0207681_100257652 221
31 3300025931 Ga0207644_10005164 Ga0207644_100051643 221
32 3300025972 Ga0207668_10049739 Ga0207668_100497393 221
33 3300025986 Ga0207658_10011887 Ga0207658_100118873 221
34 3300026035 Ga0207703_10012980 Ga0207703_100129802 221
35 3300026041 Ga0207639_10111211 Ga0207639_101112112 221
36 3300026088 Ga0207641_10002650 Ga0207641_1000265016 221
37 3300026121 Ga0207683_10809673 Ga0207683_108096732 221
38 3300028379 Ga0268266_10021190 Ga0268266_100211902 221
39 3300028381 Ga0268264_10009512 Ga0268264_100095123 221
40 3300037068 Ga0373925_0128560 Ga0373925_0128560_491_1165 221
41 3300037471 Ga0395905_0022481 Ga0395905_0022481_1119_1796 221
42 3300037471 Ga0395905_0410077 Ga0395905_0410077_501_1178 221
43 3300038443 Ga0395901_0428213 Ga0395901_0428213_34_714 221
44 3300038443 Ga0395901_0481787 Ga0395901_0481787_299_976 221
45 3300046460 Ga0495638_0000590 Ga0495638_0000590_25020_25712 221
46 3300046660 Ga0495625_0010034 Ga0495625_0010034_3647_4339 221
47 3300048904 Ga0496101_0077540 Ga0496101_0077540_1489_2166 221
48 3300048918 Ga0496115_0289760 Ga0496115_0289760_423_1103 221
49 3300048921 Ga0496118_0174898 Ga0496118_0174898_290_982 221
50 3300048924 Ga0496121_0170660 Ga0496121_0170660_459_1151 221
51 3300049581 Ga0501047_0024591 Ga0501047_0024591_231_908 221
52 3300049581 Ga0501047_0790113 Ga0501047_0790113_34_714 221
53 3300050509 nmdc:mga0qj67_44879_c1 nmdc:mga0qj67_44879_c1_377_1069 221
54 3300053091 Ga0500647_0127433 Ga0500647_0127433_59_736 221
55 3300053111 Ga0500572_000813 Ga0500572_000813_4025_4702 221
56 3300053733 Ga0500552_002832 Ga0500552_002832_691_1368 221
57 3300005262 Ga0065165_1027507 Ga0065165_10275072 222
58 3300005842 Ga0068858_100141667 Ga0068858_1001416673 222
59 3300005937 Ga0081455_10003258 Ga0081455_100032583 222
60 3300009093 Ga0105240_10000500 Ga0105240_1000050017 222
61 3300009093 Ga0105240_10173915 Ga0105240_101739153 222
62 3300025913 Ga0207695_10003336 Ga0207695_100033364 222
63 3300025913 Ga0207695_10178639 Ga0207695_101786392 222
64 3300025942 Ga0207689_10461888 Ga0207689_104618882 222
65 3300026041 Ga0207639_10794582 Ga0207639_107945821 222
66 3300036401 Ga0373937_0397326 Ga0373937_0397326_189_869 222
67 3300046684 Ga0495669_0000009 Ga0495669_0000009_114952_115632 222
68 3300049581 Ga0501047_0001157 Ga0501047_0001157_12908_13585 222
69 3300049581 Ga0501047_0221583 Ga0501047_0221583_136_810 222
70 3300053153 Ga0500616_0080822 Ga0500616_0080822_228_905 222
71 3300005331 Ga0070670_100000039 Ga0070670_100000039150 223
72 3300005347 Ga0070668_100000155 Ga0070668_10000015513 223
73 3300005347 Ga0070668_100001488 Ga0070668_1000014888 223
74 3300005367 Ga0070667_100000231 Ga0070667_10000023145 223
75 3300005367 Ga0070667_100007110 Ga0070667_1000071104 223
76 3300005548 Ga0070665_100001079 Ga0070665_10000107914 223
77 3300005548 Ga0070665_100002798 Ga0070665_1000027987 223
78 3300005617 Ga0068859_100285837 Ga0068859_1002858372 223
79 3300005618 Ga0068864_100000068 Ga0068864_10000006892 223
80 3300005841 Ga0068863_100000758 Ga0068863_10000075822 223
81 3300005843 Ga0068860_100000303 Ga0068860_10000030340 223
82 3300005843 Ga0068860_100242551 Ga0068860_1002425512 223
83 3300005844 Ga0068862_100000910 Ga0068862_1000009104 223
84 3300005844 Ga0068862_100274768 Ga0068862_1002747682 223
85 3300006931 Ga0097620_100285853 Ga0097620_1002858532 223
86 3300009177 Ga0105248_10037264 Ga0105248_100372643 223
87 3300009553 Ga0105249_10001383 Ga0105249_100013838 223
88 3300014325 Ga0163163_10097561 Ga0163163_100975613 223
89 3300014968 Ga0157379_10019744 Ga0157379_100197444 223
90 3300025903 Ga0207680_10010816 Ga0207680_100108163 223
91 3300025925 Ga0207650_10000161 Ga0207650_1000016180 223
92 3300025941 Ga0207711_10045815 Ga0207711_100458153 223
93 3300025961 Ga0207712_10002339 Ga0207712_100023399 223
94 3300025972 Ga0207668_10000587 Ga0207668_1000058714 223
95 3300025972 Ga0207668_10000920 Ga0207668_100009209 223
96 3300025986 Ga0207658_10000791 Ga0207658_100007913 223
97 3300025986 Ga0207658_10004912 Ga0207658_100049123 223
98 3300026088 Ga0207641_10001619 Ga0207641_1000161913 223
99 3300026095 Ga0207676_10000127 Ga0207676_1000012757 223
100 3300028379 Ga0268266_10040432 Ga0268266_100404322 223
101 3300028380 Ga0268265_10002255 Ga0268265_100022553 223
102 3300028380 Ga0268265_10019856 Ga0268265_100198563 223
103 3300028381 Ga0268264_10000059 Ga0268264_1000005929 223
104 3300028800 Ga0265338_10047202 Ga0265338_100472023 223
105 3300031711 Ga0265314_10031409 Ga0265314_100314092 223
106 3300035089 Ga0373944_0017456 Ga0373944_0017456_952_1644 223
107 3300035695 Ga0373927_0000947 Ga0373927_0000947_5984_6676 223
108 3300037068 Ga0373925_0000760 Ga0373925_0000760_23678_24370 223
109 3300037466 Ga0395898_0409779 Ga0395898_0409779_179_871 223
110 3300047320 Ga0495672_0120955 Ga0495672_0120955_250_942 223
111 3300053087 Ga0500643_006997 Ga0500643_006997_2058_2750 223
112 3300053103 Ga0500555_000714 Ga0500555_000714_8844_9563 223
113 3300053104 Ga0500556_0004865 Ga0500556_0004865_2130_2849 223
114 3300046459 Ga0495629_0020456 Ga0495629_0020456_3650_4336 224
115 3300046463 Ga0495653_0044763 Ga0495653_0044763_2455_3141 224
116 3300046517 Ga0495630_0264800 Ga0495630_0264800_330_1016 224
117 3300046559 Ga0495667_0167347 Ga0495667_0167347_390_1076 224
118 3300046663 Ga0495635_0056573 Ga0495635_0056573_231_917 224
119 3300047673 Ga0495593_0228484 Ga0495593_0228484_206_892 224
120 3300048915 Ga0496112_0007341 Ga0496112_0007341_560_1246 224
121 3300053085 Ga0495619_0398037 Ga0495619_0398037_160_846 224
122 3300005614 Ga0068856_100061362 Ga0068856_1000613623 225
123 3300014325 Ga0163163_10039039 Ga0163163_100390393 225
124 3300026095 Ga0207676_10238550 Ga0207676_102385502 225
125 3300050509 nmdc:mga0qj67_148333_c1 nmdc:mga0qj67_148333_c1_48_725 225
126 3300005327 Ga0070658_10109947 Ga0070658_101099472 226
127 3300005339 Ga0070660_100060789 Ga0070660_1000607892 226
128 3300005339 Ga0070660_100203184 Ga0070660_1002031842 226
129 3300005366 Ga0070659_100001826 Ga0070659_10000182611 226
130 3300005548 Ga0070665_100010387 Ga0070665_1000103875 226
131 3300009176 Ga0105242_10073180 Ga0105242_100731802 226
132 3300009551 Ga0105238_10020124 Ga0105238_100201243 226
133 3300010375 Ga0105239_10092056 Ga0105239_100920562 226
134 3300013306 Ga0163162_10315450 Ga0163162_103154501 226
135 3300025919 Ga0207657_10221415 Ga0207657_102214152 226
136 3300025920 Ga0207649_10118894 Ga0207649_101188942 226
137 3300025924 Ga0207694_10035870 Ga0207694_100358701 226
138 3300025932 Ga0207690_10000250 Ga0207690_1000025023 226
139 3300026041 Ga0207639_10544882 Ga0207639_105448821 226
140 3300026041 Ga0207639_10881109 Ga0207639_108811091 226
141 3300028379 Ga0268266_10000005 Ga0268266_10000005645 226
142 3300035113 Ga0373936_0009874 Ga0373936_0009874_1499_2191 226
143 3300048918 Ga0496115_0000433 Ga0496115_0000433_24751_25437 226
144 3300048918 Ga0496115_0001846 Ga0496115_0001846_13061_13753 226
145 3300005327 Ga0070658_10141012 Ga0070658_101410122 227
146 3300005336 Ga0070680_100067503 Ga0070680_1000675033 227
147 3300005336 Ga0070680_100107329 Ga0070680_1001073292 227
148 3300005336 Ga0070680_100502130 Ga0070680_1005021301 227
149 3300005341 Ga0070691_10041065 Ga0070691_100410652 227
150 3300005366 Ga0070659_100009186 Ga0070659_1000091867 227
151 3300005458 Ga0070681_10019245 Ga0070681_100192453 227
152 3300005458 Ga0070681_10091156 Ga0070681_100911562 227
153 3300005530 Ga0070679_100022788 Ga0070679_1000227883 227
154 3300005530 Ga0070679_100058191 Ga0070679_1000581912 227
155 3300005539 Ga0068853_100003369 Ga0068853_1000033698 227
156 3300005539 Ga0068853_100168649 Ga0068853_1001686493 227
157 3300005563 Ga0068855_100012737 Ga0068855_1000127377 227
158 3300005563 Ga0068855_100237381 Ga0068855_1002373813 227
159 3300005577 Ga0068857_100305072 Ga0068857_1003050722 227
160 3300005578 Ga0068854_100180770 Ga0068854_1001807702 227
161 3300005614 Ga0068856_100565153 Ga0068856_1005651532 227
162 3300006048 Ga0075363_100051959 Ga0075363_1000519594 227
163 3300006173 Ga0070716_100308276 Ga0070716_1003082762 227
164 3300006881 Ga0068865_100003446 Ga0068865_1000034464 227
165 3300009093 Ga0105240_10004167 Ga0105240_1000416718 227
166 3300009093 Ga0105240_10053463 Ga0105240_100534633 227
167 3300009093 Ga0105240_11037929 Ga0105240_110379291 227
168 3300009098 Ga0105245_10831351 Ga0105245_108313511 227
169 3300009177 Ga0105248_10002464 Ga0105248_1000246412 227
170 3300009545 Ga0105237_10289005 Ga0105237_102890052 227
171 3300009551 Ga0105238_10016306 Ga0105238_100163067 227
172 3300010375 Ga0105239_10307365 Ga0105239_103073652 227
173 3300014325 Ga0163163_10048064 Ga0163163_100480645 227
174 3300025909 Ga0207705_10000943 Ga0207705_100009437 227
175 3300025911 Ga0207654_10377430 Ga0207654_103774302 227
176 3300025913 Ga0207695_10004414 Ga0207695_1000441415 227
177 3300025913 Ga0207695_10011137 Ga0207695_100111374 227
178 3300025913 Ga0207695_10117072 Ga0207695_101170722 227
179 3300025914 Ga0207671_10452057 Ga0207671_104520572 227
180 3300025917 Ga0207660_10000234 Ga0207660_1000023419 227
181 3300025917 Ga0207660_10235025 Ga0207660_102350251 227
182 3300025919 Ga0207657_10009357 Ga0207657_100093574 227
183 3300025924 Ga0207694_10030954 Ga0207694_100309543 227
184 3300025938 Ga0207704_10006105 Ga0207704_100061055 227
185 3300025941 Ga0207711_10000743 Ga0207711_1000074316 227
186 3300025981 Ga0207640_10205462 Ga0207640_102054622 227
187 3300026041 Ga0207639_10008446 Ga0207639_100084463 227
188 3300026041 Ga0207639_10512956 Ga0207639_105129562 227
189 3300026078 Ga0207702_10165355 Ga0207702_101653552 227
190 3300026078 Ga0207702_10620988 Ga0207702_106209882 227
191 3300026142 Ga0207698_10324779 Ga0207698_103247792 227
192 3300028381 Ga0268264_10834837 Ga0268264_108348371 227
193 3300037312 Ga0395899_0000847 Ga0395899_0000847_28406_29107 227
194 3300037418 Ga0395900_0000016 Ga0395900_0000016_304832_305533 227
195 3300037466 Ga0395898_0015631 Ga0395898_0015631_5975_6676 227
196 3300037471 Ga0395905_0008634 Ga0395905_0008634_8837_9538 227
197 3300038443 Ga0395901_0000028 Ga0395901_0000028_40783_41484 227
198 3300046543 Ga0495645_0214286 Ga0495645_0214286_285_1025 227
199 3300046678 Ga0495599_0154542 Ga0495599_0154542_415_1155 227
200 3300050490 nmdc:mga03n38_203769_c1 nmdc:mga03n38_203769_c1_289_996 227
201 3300031507 Ga0307509_10001479 Ga0307509_1000147925 228
202 3300046460 Ga0495638_0078571 Ga0495638_0078571_1217_1903 228
203 3300003322 rootL2_10382497 rootL2_103824972 229
204 3300003323 rootH1_10095626 rootH1_100956262 229
205 3300005289 Ga0065704_10117939 Ga0065704_101179392 229
206 3300005295 Ga0065707_10114261 Ga0065707_101142612 229
207 3300005353 Ga0070669_100203933 Ga0070669_1002039332 229
208 3300005354 Ga0070675_100581918 Ga0070675_1005819182 229
209 3300005543 Ga0070672_100382260 Ga0070672_1003822602 229
210 3300005617 Ga0068859_100164037 Ga0068859_1001640372 229
211 3300005844 Ga0068862_100174258 Ga0068862_1001742582 229
212 3300006931 Ga0097620_100164031 Ga0097620_1001640312 229
213 3300009094 Ga0111539_10349665 Ga0111539_103496652 229
214 3300009101 Ga0105247_10293263 Ga0105247_102932632 229
215 3300009177 Ga0105248_10385628 Ga0105248_103856282 229
216 3300014326 Ga0157380_10000814 Ga0157380_100008143 229
217 3300025926 Ga0207659_10616349 Ga0207659_106163492 229
218 3300025936 Ga0207670_10307813 Ga0207670_103078132 229
219 3300025940 Ga0207691_10302334 Ga0207691_103023342 229
220 3300025941 Ga0207711_10369018 Ga0207711_103690182 229
221 3300028380 Ga0268265_10340129 Ga0268265_103401292 229
222 3300028563 Ga0265319_1002855 Ga0265319_10028553 229
223 3300028563 Ga0265319_1004676 Ga0265319_10046767 229
224 3300028563 Ga0265319_1027296 Ga0265319_10272962 229
225 3300028573 Ga0265334_10001015 Ga0265334_100010157 229
226 3300028577 Ga0265318_10009307 Ga0265318_100093072 229
227 3300028577 Ga0265318_10027424 Ga0265318_100274242 229
228 3300028666 Ga0265336_10005158 Ga0265336_100051583 229
229 3300028666 Ga0265336_10037509 Ga0265336_100375092 229
230 3300028800 Ga0265338_10052543 Ga0265338_100525432 229
231 3300028800 Ga0265338_10279260 Ga0265338_102792603 229
232 3300029957 Ga0265324_10016182 Ga0265324_100161823 229
233 3300031241 Ga0265325_10016754 Ga0265325_100167546 229
234 3300031241 Ga0265325_10150162 Ga0265325_101501621 229
235 3300031242 Ga0265329_10011099 Ga0265329_100110993 229
236 3300031247 Ga0265340_10002055 Ga0265340_100020555 229
237 3300031249 Ga0265339_10041053 Ga0265339_100410536 229
238 3300031249 Ga0265339_10067361 Ga0265339_100673613 229
239 3300031249 Ga0265339_10081075 Ga0265339_100810753 229
240 3300031250 Ga0265331_10038560 Ga0265331_100385602 229
241 3300031344 Ga0265316_10032275 Ga0265316_100322753 229
242 3300031344 Ga0265316_10098353 Ga0265316_100983533 229
243 3300031456 Ga0307513_10358022 Ga0307513_103580222 229
244 3300031711 Ga0265314_10010241 Ga0265314_100102416 229
245 3300031712 Ga0265342_10045282 Ga0265342_100452822 229

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

25

134

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9912 6 120
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9908 6 120
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9904 6 120
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9869 4 123
1zh4-assembly1.cif.gz_A crystal structure of the mg+2/bef3-bound receiver domain of kdp potassium transport system response regulator kdpe 0.9808 4 123
ID Description Score Start End Superfamily
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9949 6 83 3.40.50.2300
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9913 4 83 3.40.50.2300
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9865 3 124 3.40.50.2300
af_P69228_9_89_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.984 3 83 3.40.50.2300
af_P9WGM1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9835 3 83 3.40.50.2300
ID Description Score Start End GO Terms
AF-I8TRD0-F1-model_v4 Two component transcriptional regulator, winged helix family 0.9701 4 229 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A431MQV3-F1-model_v4 Response regulator 0.9659 1 229 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A1I7CJW1-F1-model_v4 deleted 0.9602 4 225
AF-M6Y5Y5-F1-model_v4 Putative KDP operon transcriptional regulatory protein KdpE 0.9581 4 229 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A0U3T5H5-F1-model_v4 Transcriptional regulator 0.9572 4 226 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Feature Viewer

pLDDT pTM Quality
90.42 0.82 High
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Predicted Structure (AlphaFold2)

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