F357165

General Info

Members Datasets Scaffolds Average Seq Length
245 153 490 328

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100215092|Ga0070707_1002150923
Length 368
Sequence MDPVSQWNPAHVRGAYVGRVPRCLGIHGIADPPDLMASTFDPSPLAARIAADAEVRDRDLGFGAVVSRDSRQRLLNRDGSFNVVREGLGMFETVAPYSHLLTVSWTAFIGLITLLYLGLNLVFAVLFVLCGPDALAGPGSHMLGGRFSQAFFFSIQTFATIGYGQIGPNGLAANILVTIEALIGLMYQALATGLLFARFARPLAAIVFSRQAIVAPYAGIQALEFRIANRRRRNEIIELEAQVLYTAFERNSEGQLVRRFRLLPLERNKVTFFPLSWTIVHPIDDQSPLAGKTPADLERDQAEILVLLTGVDETYEQTVHARTSYRADEIIWNARFQPVFRGESPSHLLAVDVSRLHDVVRLKPDTTD

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
37 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
60 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
61 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
109 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
113 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
115 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
116 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
123 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
124 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
125 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
129 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
130 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
131 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
134 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
137 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
138 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
139 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
140 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
141 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
153 2914759650 Rhizosphaericola mali Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.41
Nodule 0
Rhizoplane 0.82
Rhizosphere 97.55
Stem 0
Stem Tuber 0
Unclassified 24.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100215092 3300005468 Bacteria 1873
2 SwRhRL2b_contig_1556719 2162886007 Bacteria 2164
3 rootH1_10063987 3300003316 Bacteria 4138
4 rootH1_10271413 3300003323 Bacteria 1255
5 Ga0065707_10090454 3300005295 Bacteria 4137
6 Ga0065707_10095172 3300005295 Bacteria 3405
7 Ga0070676_10023877 3300005328 Bacteria 3440
8 Ga0070683_100077446 3300005329 Bacteria 3109
9 Ga0070683_100077999 3300005329 Unclassified 3098
10 Ga0070683_100353737 3300005329 Bacteria 1399
11 Ga0070690_100174125 3300005330 Unclassified 1483
12 Ga0070666_10003015 3300005335 Bacteria 10214
13 Ga0070666_10064834 3300005335 Bacteria 2478
14 Ga0070689_100034765 3300005340 Unclassified 3846
15 Ga0070691_10028271 3300005341 Bacteria 2618
16 Ga0070687_100003921 3300005343 Bacteria 5856
17 Ga0070687_100015988 3300005343 Unclassified 3408
18 Ga0070687_100036188 3300005343 Bacteria 2458
19 Ga0070692_10083891 3300005345 Unclassified 1721
20 Ga0070669_100000124 3300005353 Bacteria 70510
21 Ga0070669_100000306 3300005353 Bacteria 38513
22 Ga0070675_100004822 3300005354 Bacteria 10289
23 Ga0070675_100368438 3300005354 Unclassified 1277
24 Ga0070671_100032069 3300005355 Bacteria 4345
25 Ga0070673_100025084 3300005364 Bacteria 4382
26 Ga0070673_100451393 3300005364 Bacteria 1157
27 Ga0070688_100001452 3300005365 Bacteria 11792
28 Ga0070688_100141417 3300005365 Unclassified 1635
29 Ga0070659_100056368 3300005366 Bacteria 3099
30 Ga0070667_100015993 3300005367 Bacteria 6208
31 Ga0070714_100000025 3300005435 Bacteria 147717
32 Ga0070713_100129332 3300005436 Bacteria 2225
33 Ga0070701_10009154 3300005438 Bacteria 4327
34 Ga0070705_100021003 3300005440 Unclassified 3466
35 Ga0070700_100069998 3300005441 Unclassified 2236
36 Ga0070700_100079752 3300005441 Unclassified 2110
37 Ga0070700_100193671 3300005441 Bacteria 1423
38 Ga0070694_100000989 3300005444 Bacteria 16124
39 Ga0070694_100055533 3300005444 Bacteria 2686
40 Ga0068867_100331637 3300005459 Bacteria 1264
41 Ga0070685_10000129 3300005466 Bacteria 48224
42 Ga0070685_10000915 3300005466 Bacteria 15870
43 Ga0070685_10029338 3300005466 Unclassified 3055
44 Ga0070685_10030815 3300005466 Bacteria 2992
45 Ga0070685_10072148 3300005466 Unclassified 2049
46 Ga0070706_100295013 3300005467 Bacteria 1513
47 Ga0070707_100011816 3300005468 Bacteria 8153
48 Ga0070698_100022903 3300005471 Bacteria 6531
49 Ga0070698_100513095 3300005471 Bacteria 1137
50 Ga0070699_100040590 3300005518 Bacteria 4029
51 Ga0070699_100073880 3300005518 Unclassified 2966
52 Ga0070699_100188818 3300005518 Unclassified 1830
53 Ga0070684_100005924 3300005535 Bacteria 9412
54 Ga0070697_100122084 3300005536 Bacteria 2180
55 Ga0068853_100200085 3300005539 Bacteria 1818
56 Ga0070672_100004786 3300005543 Bacteria 8887
57 Ga0070672_100028915 3300005543 Unclassified 4150
58 Ga0070686_100078696 3300005544 Bacteria 2177
59 Ga0070695_100021840 3300005545 Bacteria 3921
60 Ga0070665_100001567 3300005548 Bacteria 26375
61 Ga0070704_100000034 3300005549 Bacteria 44933
62 Ga0070704_100014637 3300005549 Bacteria 4904
63 Ga0070664_100082571 3300005564 Bacteria 2772
64 Ga0070664_100471723 3300005564 Bacteria 1154
65 Ga0068857_100022812 3300005577 Bacteria 5507
66 Ga0068856_100092484 3300005614 Bacteria 3010
67 Ga0070702_100087296 3300005615 Bacteria 1883
68 Ga0070702_100237578 3300005615 Unclassified 1228
69 Ga0068859_100001958 3300005617 Bacteria 20998
70 Ga0068864_100021655 3300005618 Bacteria 5383
71 Ga0068861_100011857 3300005719 Bacteria 6068
72 Ga0068870_10001533 3300005840 Bacteria 9381
73 Ga0068863_100055936 3300005841 Bacteria 3736
74 Ga0068858_100028547 3300005842 Bacteria 5182
75 Ga0068858_100053778 3300005842 Bacteria 3724
76 Ga0068860_100002794 3300005843 Bacteria 18152
77 Ga0068860_100033762 3300005843 Unclassified 4909
78 Ga0068860_100188824 3300005843 Unclassified 1994
79 Ga0068860_100302607 3300005843 Unclassified 1567
80 Ga0068862_100000265 3300005844 Bacteria 58275
81 Ga0081455_10104328 3300005937 Bacteria 2268
82 Ga0070712_100238680 3300006175 Bacteria 1447
83 Ga0097621_100034595 3300006237 Unclassified 4032
84 Ga0097621_100290568 3300006237 Unclassified 1441
85 Ga0068871_100105811 3300006358 Bacteria 2361
86 Ga0068871_100298860 3300006358 Unclassified 1412
87 Ga0075428_100003618 3300006844 Bacteria 16941
88 Ga0075433_10025095 3300006852 Bacteria 5037
89 Ga0075433_10042718 3300006852 Bacteria 3934
90 Ga0075434_100003866 3300006871 Bacteria 13395
91 Ga0075434_100009425 3300006871 Bacteria 9100
92 Ga0075434_100019375 3300006871 Bacteria 6585
93 Ga0075434_100087523 3300006871 Bacteria 3116
94 Ga0075434_100276866 3300006871 Bacteria 1697
95 Ga0075429_100236804 3300006880 Unclassified 1599
96 Ga0068865_100065460 3300006881 Bacteria 2561
97 Ga0075436_100091631 3300006914 Unclassified 2113
98 Ga0097620_100001958 3300006931 Bacteria 20998
99 Ga0075435_100024409 3300007076 Bacteria 4692
100 Ga0111539_10024727 3300009094 Bacteria 7367
101 Ga0111539_10075794 3300009094 Unclassified 3962
102 Ga0111539_10092207 3300009094 Bacteria 3560
103 Ga0105247_10050554 3300009101 Bacteria 2558
104 Ga0114129_10007101 3300009147 Bacteria 15937
105 Ga0114129_10020856 3300009147 Bacteria 9309
106 Ga0114129_10028208 3300009147 Bacteria 7954
107 Ga0114129_10038400 3300009147 Bacteria 6755
108 Ga0114129_10123947 3300009147 Bacteria 3554
109 Ga0114129_10353951 3300009147 Bacteria 1944
110 Ga0114129_10415329 3300009147 Bacteria 1771
111 Ga0105242_10504883 3300009176 Bacteria 1151
112 Ga0105248_10057253 3300009177 Bacteria 4375
113 Ga0105248_10074746 3300009177 Bacteria 3808
114 Ga0105248_10086153 3300009177 Bacteria 3535
115 Ga0105248_10096795 3300009177 Bacteria 3325
116 Ga0105238_10000026 3300009551 Bacteria 195584
117 Ga0105249_10007048 3300009553 Bacteria 9806
118 Ga0157378_10051311 3300013297 Unclassified 3670
119 Ga0157375_10006055 3300013308 Bacteria 10548
120 Ga0157380_10021025 3300014326 Bacteria 4889
121 Ga0157379_10161788 3300014968 Bacteria 2020
122 Ga0207680_10060959 3300025903 Bacteria 2299
123 Ga0207645_10030921 3300025907 Bacteria 3448
124 Ga0207643_10001325 3300025908 Bacteria 14342
125 Ga0207684_10199873 3300025910 Bacteria 1724
126 Ga0207662_10031589 3300025918 Bacteria 3077
127 Ga0207662_10059496 3300025918 Bacteria 2290
128 Ga0207681_10000032 3300025923 Bacteria 168987
129 Ga0207681_10004309 3300025923 Bacteria 8782
130 Ga0207694_10000034 3300025924 Bacteria 197650
131 Ga0207659_10000470 3300025926 Bacteria 24214
132 Ga0207659_10037592 3300025926 Bacteria 3362
133 Ga0207700_10277241 3300025928 Unclassified 1441
134 Ga0207664_10000115 3300025929 Bacteria 70933
135 Ga0207644_10035496 3300025931 Bacteria 3494
136 Ga0207706_10031633 3300025933 Bacteria 4713
137 Ga0207686_10048025 3300025934 Unclassified 2642
138 Ga0207670_10009918 3300025936 Bacteria 5457
139 Ga0207691_10012536 3300025940 Bacteria 8127
140 Ga0207691_10049441 3300025940 Bacteria 3852
141 Ga0207711_10107910 3300025941 Bacteria 2472
142 Ga0207711_10249010 3300025941 Bacteria 1631
143 Ga0207661_10013782 3300025944 Bacteria 5907
144 Ga0207661_10092050 3300025944 Unclassified 2527
145 Ga0207679_10376656 3300025945 Bacteria 1243
146 Ga0207651_10013143 3300025960 Bacteria 4724
147 Ga0207651_10227519 3300025960 Unclassified 1512
148 Ga0207712_10012172 3300025961 Bacteria 5495
149 Ga0207658_10072407 3300025986 Bacteria 2612
150 Ga0207703_10008884 3300026035 Bacteria 7915
151 Ga0207703_10398873 3300026035 Unclassified 1276
152 Ga0207639_10131357 3300026041 Bacteria 2073
153 Ga0207639_10199509 3300026041 Bacteria 1715
154 Ga0207708_10020200 3300026075 Bacteria 5023
155 Ga0207708_10034396 3300026075 Bacteria 3855
156 Ga0207702_10283256 3300026078 Bacteria 1568
157 Ga0207648_10289962 3300026089 Bacteria 1465
158 Ga0207676_10016132 3300026095 Bacteria 5404
159 Ga0207676_10265374 3300026095 Unclassified 1552
160 Ga0207674_10007513 3300026116 Bacteria 12706
161 Ga0207675_100125658 3300026118 Bacteria 2429
162 Ga0207675_100151347 3300026118 Bacteria 2208
163 Ga0207675_100345815 3300026118 Unclassified 1456
164 Ga0207428_10000958 3300027907 Bacteria 32012
165 Ga0268266_10000593 3300028379 Bacteria 49658
166 Ga0268266_10098729 3300028379 Unclassified 2570
167 Ga0268265_10000733 3300028380 Bacteria 31991
168 Ga0268264_10009189 3300028381 Bacteria 8188
169 Ga0268264_10088968 3300028381 Bacteria 2658
170 Ga0268264_10136768 3300028381 Unclassified 2179
171 Ga0268264_10273875 3300028381 Unclassified 1578
172 Ga0268264_10372231 3300028381 Bacteria 1366
173 Ga0265314_10124982 3300031711 Bacteria 1613
174 Ga0307409_100368094 3300031995 Bacteria 1362
175 Ga0307411_10162979 3300032005 Bacteria 1673
176 Ga0307415_100339687 3300032126 Bacteria 1260
177 Ga0373959_0000163 3300034820 Bacteria 14947
178 Ga0373923_0047264 3300035111 Unclassified 1793
179 Ga0373939_0008089 3300035114 Unclassified 2571
180 Ga0373953_0079478 3300035117 Unclassified 1362
181 Ga0373935_0002935 3300035692 Bacteria 9824
182 Ga0395905_0095058 3300037471 Bacteria 2796
183 Ga0395901_0009316 3300038443 Bacteria 9952
184 Ga0436365_0096401 3300039437 Unclassified 1036
185 Ga0451800_0972466 3300041459 Unclassified 1092
186 Ga0451577_0000591 3300042876 Bacteria 58202
187 Ga0451577_0000958 3300042876 Bacteria 42272
188 Ga0466969_0098947 3300044656 Unclassified 1375
189 Ga0453683_0077970 3300044673 Archaea 2075
190 Ga0466961_0148537 3300044693 Unclassified 1464
191 Ga0466963_0113005 3300044694 Unclassified 1865
192 Ga0453684_0000252 3300044712 Bacteria 231665
193 Ga0453684_0009450 3300044712 Bacteria 17055
194 Ga0453684_0494426 3300044712 Bacteria 1355
195 Ga0451576_0020829 3300045051 Bacteria 7136
196 Ga0451576_0032553 3300045051 Bacteria 5549
197 Ga0451576_0071891 3300045051 Unclassified 3600
198 Ga0451576_0212030 3300045051 Unclassified 2022
199 Ga0495653_0013951 3300046463 Bacteria 6552
200 Ga0495584_0062048 3300046491 Bacteria 1879
201 Ga0495585_0144068 3300046492 Unclassified 1246
202 Ga0495594_0011390 3300046499 Bacteria 4620
203 Ga0495632_0012227 3300046519 Bacteria 4958
204 Ga0495663_0014842 3300046525 Bacteria 2188
205 Ga0495642_0027224 3300046528 Unclassified 2274
206 Ga0495645_0036158 3300046543 Bacteria 3600
207 Ga0495645_0284117 3300046543 Unclassified 1087
208 Ga0495633_0052878 3300046558 Unclassified 1912
209 Ga0495634_0082455 3300046642 Bacteria 2101
210 Ga0495659_0003005 3300046664 Bacteria 5408
211 Ga0495659_0006843 3300046664 Bacteria 3604
212 Ga0495659_0010551 3300046664 Unclassified 2967
213 Ga0495659_0034915 3300046664 Bacteria 1770
214 Ga0495599_0113583 3300046678 Unclassified 1686
215 Ga0495669_0031782 3300046684 Unclassified 2318
216 Ga0495636_0032570 3300047318 Unclassified 2138
217 Ga0495636_0077156 3300047318 Unclassified 1430
218 Ga0496114_0000008 3300048917 Bacteria 420692
219 Ga0501249_028538 3300049679 Bacteria 1238
220 Ga0501083_0000221 3300049744 Bacteria 36795
221 nmdc:mga05p37_100164_c1 3300050507 Bacteria 3568
222 nmdc:mga05p37_105168_c1 3300050507 Unclassified 3473
223 nmdc:mga05p37_106120_c1 3300050507 Archaea 3455
224 nmdc:mga05p37_155509_c1 3300050507 Unclassified 2795
225 nmdc:mga05p37_327724_c1 3300050507 Bacteria 1810
226 nmdc:mga05p37_3655_c1 3300050507 Bacteria 17990
227 nmdc:mga05p37_595869_c1 3300050507 Bacteria 1248
228 nmdc:mga05p37_728452_c1 3300050507 Bacteria 1097
229 nmdc:mga09592_41341_c1 3300050508 Bacteria 3876
230 nmdc:mga08y16_8850_c1 3300050511 Bacteria 10567
231 nmdc:mga08y16_94793_c1 3300050511 Unclassified 3109
232 nmdc:mga08y16_99203_c1 3300050511 Bacteria 3032
233 nmdc:mga0n895_21041_c1 3300050512 Bacteria 6095
234 nmdc:mga0n895_40191_c1 3300050512 Bacteria 4543
235 nmdc:mga0n895_54145_c1 3300050512 Bacteria 3945
236 nmdc:mga0n895_6792_c1 3300050512 Bacteria 9766
237 nmdc:mga0rr50_260139_c1 3300050513 Bacteria 1444
238 nmdc:mga0rr50_71537_c1 3300050513 Bacteria 2647
239 nmdc:mga08x19_190059_c1 3300050514 Unclassified 1405
240 nmdc:mga0a205_115732_c1 3300050515 Bacteria 2580
241 nmdc:mga0a205_195914_c1 3300050515 Bacteria 1911
242 nmdc:mga0a205_38200_c1 3300050515 Bacteria 4618
243 nmdc:mga0a205_61653_c1 3300050515 Bacteria 3623
244 Ga0500628_000799 3300053129 Bacteria 5584
245 2914759956 2914759650 Bacteria 4701441
246 Ga0070707_100215092
247 SwRhRL2b_contig_1556719
248 rootH1_10063987
249 rootH1_10271413
250 Ga0065707_10090454
251 Ga0065707_10095172
252 Ga0070676_10023877
253 Ga0070683_100077446
254 Ga0070683_100077999
255 Ga0070683_100353737
256 Ga0070690_100174125
257 Ga0070666_10003015
258 Ga0070666_10064834
259 Ga0070689_100034765
260 Ga0070691_10028271
261 Ga0070687_100003921
262 Ga0070687_100015988
263 Ga0070687_100036188
264 Ga0070692_10083891
265 Ga0070669_100000124
266 Ga0070669_100000306
267 Ga0070675_100004822
268 Ga0070675_100368438
269 Ga0070671_100032069
270 Ga0070673_100025084
271 Ga0070673_100451393
272 Ga0070688_100001452
273 Ga0070688_100141417
274 Ga0070659_100056368
275 Ga0070667_100015993
276 Ga0070714_100000025
277 Ga0070713_100129332
278 Ga0070701_10009154
279 Ga0070705_100021003
280 Ga0070700_100069998
281 Ga0070700_100079752
282 Ga0070700_100193671
283 Ga0070694_100000989
284 Ga0070694_100055533
285 Ga0068867_100331637
286 Ga0070685_10000129
287 Ga0070685_10000915
288 Ga0070685_10029338
289 Ga0070685_10030815
290 Ga0070685_10072148
291 Ga0070706_100295013
292 Ga0070707_100011816
293 Ga0070698_100022903
294 Ga0070698_100513095
295 Ga0070699_100040590
296 Ga0070699_100073880
297 Ga0070699_100188818
298 Ga0070684_100005924
299 Ga0070697_100122084
300 Ga0068853_100200085
301 Ga0070672_100004786
302 Ga0070672_100028915
303 Ga0070686_100078696
304 Ga0070695_100021840
305 Ga0070665_100001567
306 Ga0070704_100000034
307 Ga0070704_100014637
308 Ga0070664_100082571
309 Ga0070664_100471723
310 Ga0068857_100022812
311 Ga0068856_100092484
312 Ga0070702_100087296
313 Ga0070702_100237578
314 Ga0068859_100001958
315 Ga0068864_100021655
316 Ga0068861_100011857
317 Ga0068870_10001533
318 Ga0068863_100055936
319 Ga0068858_100028547
320 Ga0068858_100053778
321 Ga0068860_100002794
322 Ga0068860_100033762
323 Ga0068860_100188824
324 Ga0068860_100302607
325 Ga0068862_100000265
326 Ga0081455_10104328
327 Ga0070712_100238680
328 Ga0097621_100034595
329 Ga0097621_100290568
330 Ga0068871_100105811
331 Ga0068871_100298860
332 Ga0075428_100003618
333 Ga0075433_10025095
334 Ga0075433_10042718
335 Ga0075434_100003866
336 Ga0075434_100009425
337 Ga0075434_100019375
338 Ga0075434_100087523
339 Ga0075434_100276866
340 Ga0075429_100236804
341 Ga0068865_100065460
342 Ga0075436_100091631
343 Ga0097620_100001958
344 Ga0075435_100024409
345 Ga0111539_10024727
346 Ga0111539_10075794
347 Ga0111539_10092207
348 Ga0105247_10050554
349 Ga0114129_10007101
350 Ga0114129_10020856
351 Ga0114129_10028208
352 Ga0114129_10038400
353 Ga0114129_10123947
354 Ga0114129_10353951
355 Ga0114129_10415329
356 Ga0105242_10504883
357 Ga0105248_10057253
358 Ga0105248_10074746
359 Ga0105248_10086153
360 Ga0105248_10096795
361 Ga0105238_10000026
362 Ga0105249_10007048
363 Ga0157378_10051311
364 Ga0157375_10006055
365 Ga0157380_10021025
366 Ga0157379_10161788
367 Ga0207680_10060959
368 Ga0207645_10030921
369 Ga0207643_10001325
370 Ga0207684_10199873
371 Ga0207662_10031589
372 Ga0207662_10059496
373 Ga0207681_10000032
374 Ga0207681_10004309
375 Ga0207694_10000034
376 Ga0207659_10000470
377 Ga0207659_10037592
378 Ga0207700_10277241
379 Ga0207664_10000115
380 Ga0207644_10035496
381 Ga0207706_10031633
382 Ga0207686_10048025
383 Ga0207670_10009918
384 Ga0207691_10012536
385 Ga0207691_10049441
386 Ga0207711_10107910
387 Ga0207711_10249010
388 Ga0207661_10013782
389 Ga0207661_10092050
390 Ga0207679_10376656
391 Ga0207651_10013143
392 Ga0207651_10227519
393 Ga0207712_10012172
394 Ga0207658_10072407
395 Ga0207703_10008884
396 Ga0207703_10398873
397 Ga0207639_10131357
398 Ga0207639_10199509
399 Ga0207708_10020200
400 Ga0207708_10034396
401 Ga0207702_10283256
402 Ga0207648_10289962
403 Ga0207676_10016132
404 Ga0207676_10265374
405 Ga0207674_10007513
406 Ga0207675_100125658
407 Ga0207675_100151347
408 Ga0207675_100345815
409 Ga0207428_10000958
410 Ga0268266_10000593
411 Ga0268266_10098729
412 Ga0268265_10000733
413 Ga0268264_10009189
414 Ga0268264_10088968
415 Ga0268264_10136768
416 Ga0268264_10273875
417 Ga0268264_10372231
418 Ga0265314_10124982
419 Ga0307409_100368094
420 Ga0307411_10162979
421 Ga0307415_100339687
422 Ga0373959_0000163
423 Ga0373923_0047264
424 Ga0373939_0008089
425 Ga0373953_0079478
426 Ga0373935_0002935
427 Ga0395905_0095058
428 Ga0395901_0009316
429 Ga0436365_0096401
430 Ga0451800_0972466
431 Ga0451577_0000591
432 Ga0451577_0000958
433 Ga0466969_0098947
434 Ga0453683_0077970
435 Ga0466961_0148537
436 Ga0466963_0113005
437 Ga0453684_0000252
438 Ga0453684_0009450
439 Ga0453684_0494426
440 Ga0451576_0020829
441 Ga0451576_0032553
442 Ga0451576_0071891
443 Ga0451576_0212030
444 Ga0495653_0013951
445 Ga0495584_0062048
446 Ga0495585_0144068
447 Ga0495594_0011390
448 Ga0495632_0012227
449 Ga0495663_0014842
450 Ga0495642_0027224
451 Ga0495645_0036158
452 Ga0495645_0284117
453 Ga0495633_0052878
454 Ga0495634_0082455
455 Ga0495659_0003005
456 Ga0495659_0006843
457 Ga0495659_0010551
458 Ga0495659_0034915
459 Ga0495599_0113583
460 Ga0495669_0031782
461 Ga0495636_0032570
462 Ga0495636_0077156
463 Ga0496114_0000008
464 Ga0501249_028538
465 Ga0501083_0000221
466 nmdc:mga05p37_100164_c1
467 nmdc:mga05p37_105168_c1
468 nmdc:mga05p37_106120_c1
469 nmdc:mga05p37_155509_c1
470 nmdc:mga05p37_327724_c1
471 nmdc:mga05p37_3655_c1
472 nmdc:mga05p37_595869_c1
473 nmdc:mga05p37_728452_c1
474 nmdc:mga09592_41341_c1
475 nmdc:mga08y16_8850_c1
476 nmdc:mga08y16_94793_c1
477 nmdc:mga08y16_99203_c1
478 nmdc:mga0n895_21041_c1
479 nmdc:mga0n895_40191_c1
480 nmdc:mga0n895_54145_c1
481 nmdc:mga0n895_6792_c1
482 nmdc:mga0rr50_260139_c1
483 nmdc:mga0rr50_71537_c1
484 nmdc:mga08x19_190059_c1
485 nmdc:mga0a205_115732_c1
486 nmdc:mga0a205_195914_c1
487 nmdc:mga0a205_38200_c1
488 nmdc:mga0a205_61653_c1
489 Ga0500628_000799
490 2914759956

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01007

IRK

Inward rectifier potassium channel transmembrane domain

140

202

0.93

PF17655

IRK_C

Inward rectifier potassium channel C-terminal domain

206

367

0.91

PF07885

Ion_trans_2

Ion channel

111

201

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u4e-assembly1.cif.gz_A crystal structure of cytoplasmic domains of girk1 channel 0.904 171 327
1u4f-assembly1.cif.gz_A crystal structure of cytoplasmic domains of irk1 (kir2.1) channel 0.8927 171 327
2wll-assembly1.cif.gz_A-2 potassium channel from burkholderia pseudomallei 0.8924 47 327
2xky-assembly1.cif.gz_I single particle analysis of kir2.1nc_4 in negative stain 0.8914 171 326
3atf-assembly1.cif.gz_A crystal structure of the kir3.2 cytoplasmic domain (na+-free crystal soaked in 200 mm cesium chloride) 0.8902 171 326
ID Description Score Start End Superfamily
2wlkA02 Mainly Beta;Sandwich;Immunoglobulin-like;G protein-activated inward rectifier potassium channel 1 0.9588 168 327 2.60.40.1400
2wllB02 Mainly Beta;Sandwich;Immunoglobulin-like;G protein-activated inward rectifier potassium channel 1 0.9488 171 327 2.60.40.1400
2wlkA02 Mainly Beta;Sandwich;Immunoglobulin-like;G protein-activated inward rectifier potassium channel 1 0.9247 168 327 2.60.40.1400
2wllA01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.9247 59 167 1.10.287.70
2wllB02 Mainly Beta;Sandwich;Immunoglobulin-like;G protein-activated inward rectifier potassium channel 1 0.924 171 327 2.60.40.1400
ID Description Score Start End GO Terms
AF-A0A535AEH2-F1-model_v4 ATP-sensitive inward rectifier potassium channel 10 0.9644 180 326 GO:0005242
GO:0005886
GO:0034702
GO:0034765
GO:1990573
AF-A0A4Q3P6M8-F1-model_v4 deleted 0.9606 169 327
AF-A0A4Q3PRG0-F1-model_v4 deleted 0.9519 166 327
AF-A0A846CYG5-F1-model_v4 ATP-sensitive inward rectifier potassium channel 10 0.9504 196 325 GO:0005242
GO:0005886
GO:0034702
GO:0034765
GO:1990573
AF-T0ZPU0-F1-model_v4 Inward rectifier potassium channel 0.9476 203 326 GO:0005242
GO:0005886
GO:0034702
GO:0034765
GO:1990573

Map