F357097

General Info

Members Datasets Scaffolds Average Seq Length
245 156 245 198

Family's Representative Sequence

Representative Sequence 3300005341|Ga0070691_10045546|Ga0070691_100455462
Length 227
Sequence LRNPALPALDSALMAEERDQSEVEGRDPARVPPAEVVPEQPDEDAPALDPEAEARRVAAMSFIRRLGDPVLKSSATPVDRFDDSLRRQVSRMAGIMSDAYGVGLAAPQLGISQRLLVYRVGPDAPVIALANPELEWTSQDQEVLDEGCLSIPGITVDVERPVHVRVRATDEDGGTRLVEASGLEARVIQHEMDHLDGVLILDRTTRDERKRALRELREAERASEEAA

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
85 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
86 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
87 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
88 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
91 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
92 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
93 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
100 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
101 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
106 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
107 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
110 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
111 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
112 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
115 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
116 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
117 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
122 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
155 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
156 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.37
Metatranscriptomes 1.63
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.94
Rhizosphere 91.02
Stem 0
Stem Tuber 0
Unclassified 2.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10004821 3300003373 Bacteria 3296
2 Ga0070658_10564603 3300005327 Bacteria 985
3 Ga0070683_100045287 3300005329 Bacteria 4060
4 Ga0070683_100090950 3300005329 Bacteria 2865
5 Ga0070680_100000851 3300005336 Bacteria 21636
6 Ga0070682_100073077 3300005337 Bacteria 2199
7 Ga0070691_10045546 3300005341 Bacteria 2082
8 Ga0070661_100029904 3300005344 Bacteria 3934
9 Ga0070659_100049719 3300005366 Bacteria 3298
10 Ga0070714_100012519 3300005435 Bacteria 6777
11 Ga0070713_100240571 3300005436 Bacteria 1648
12 Ga0070710_10000005 3300005437 Bacteria 238049
13 Ga0070710_10145043 3300005437 Bacteria 1459
14 Ga0070711_100000559 3300005439 Bacteria 19456
15 Ga0070700_100006365 3300005441 Bacteria 6306
16 Ga0070700_100285158 3300005441 Bacteria 1199
17 Ga0070662_100002622 3300005457 Bacteria 11091
18 Ga0070681_10019390 3300005458 Bacteria 6806
19 Ga0068867_100420343 3300005459 Bacteria 1132
20 Ga0070679_100004554 3300005530 Bacteria 12798
21 Ga0070679_100611623 3300005530 Bacteria 1033
22 Ga0070684_100020541 3300005535 Bacteria 5478
23 Ga0070695_100340547 3300005545 Bacteria 1120
24 Ga0070696_100089009 3300005546 Bacteria 2195
25 Ga0070664_100119515 3300005564 Bacteria 2306
26 Ga0070664_100682305 3300005564 Bacteria 956
27 Ga0068854_100104931 3300005578 Bacteria 2124
28 Ga0068854_100270115 3300005578 Bacteria 1365
29 Ga0068854_100296004 3300005578 Bacteria 1307
30 Ga0068856_100058949 3300005614 Bacteria 3791
31 Ga0070702_100422076 3300005615 Bacteria 960
32 Ga0068852_100074063 3300005616 Bacteria 2998
33 Ga0068861_100012951 3300005719 Bacteria 5825
34 Ga0068870_10519990 3300005840 Bacteria 796
35 Ga0068862_100521260 3300005844 Bacteria 1131
36 Ga0081455_10065486 3300005937 Bacteria 3039
37 Ga0081538_10000993 3300005981 Bacteria 30110
38 Ga0081538_10001168 3300005981 Bacteria 27727
39 Ga0081538_10002493 3300005981 Bacteria 17948
40 Ga0081538_10003540 3300005981 Bacteria 14683
41 Ga0081538_10004281 3300005981 Bacteria 13209
42 Ga0081538_10004828 3300005981 Bacteria 12285
43 Ga0081538_10005319 3300005981 Bacteria 11590
44 Ga0081538_10016639 3300005981 Bacteria 5625
45 Ga0081538_10023626 3300005981 Bacteria 4412
46 Ga0081538_10026578 3300005981 Bacteria 4043
47 Ga0081538_10030924 3300005981 Bacteria 3623
48 Ga0081538_10036142 3300005981 Bacteria 3230
49 Ga0081539_10000479 3300005985 Bacteria 84481
50 Ga0081539_10020164 3300005985 Bacteria 4523
51 Ga0075428_100005801 3300006844 Bacteria 13714
52 Ga0075428_100277661 3300006844 Bacteria 1803
53 Ga0075428_100373500 3300006844 Bacteria 1529
54 Ga0075430_100000538 3300006846 Bacteria 28640
55 Ga0075430_100064279 3300006846 Bacteria 3083
56 Ga0075430_100787316 3300006846 Bacteria 784
57 Ga0075431_100010005 3300006847 Bacteria 9526
58 Ga0075429_100069033 3300006880 Bacteria 3077
59 Ga0075429_100226643 3300006880 Bacteria 1637
60 Ga0105240_10127110 3300009093 Bacteria 3062
61 Ga0111539_10697901 3300009094 Bacteria 1181
62 Ga0105245_10007275 3300009098 Bacteria 9693
63 Ga0105245_10731567 3300009098 Bacteria 1024
64 Ga0114129_10000941 3300009147 Bacteria 38048
65 Ga0114129_10144407 3300009147 Bacteria 3260
66 Ga0114129_10203348 3300009147 Bacteria 2681
67 Ga0114129_10385073 3300009147 Bacteria 1851
68 Ga0105242_10447086 3300009176 Bacteria 1217
69 Ga0105242_11008224 3300009176 Bacteria 841
70 Ga0105248_10401775 3300009177 Bacteria 1543
71 Ga0105237_10087442 3300009545 Bacteria 3106
72 Ga0105238_10021833 3300009551 Bacteria 6520
73 Ga0105249_10001540 3300009553 Bacteria 20238
74 Ga0105249_11944940 3300009553 Bacteria 661
75 Ga0105239_10599751 3300010375 Bacteria 1256
76 Ga0157371_10105213 3300013102 Bacteria 2002
77 Ga0157370_10017809 3300013104 Bacteria 7158
78 Ga0157369_10063151 3300013105 Bacteria 3991
79 Ga0157369_11160556 3300013105 Bacteria 789
80 Ga0157372_10061492 3300013307 Bacteria 4205
81 Ga0157372_10813340 3300013307 Bacteria 1085
82 Ga0157376_10082796 3300014969 Bacteria 2759
83 Ga0206356_11902535 3300020070 Bacteria 2360
84 Ga0206354_10595406 3300020081 Bacteria 2775
85 Ga0206354_11138651 3300020081 Bacteria 962
86 Ga0206353_10343938 3300020082 Bacteria 2006
87 Ga0213874_10000286 3300021377 Bacteria 9904
88 Ga0213876_10004599 3300021384 Bacteria 7697
89 Ga0207692_10000009 3300025898 Bacteria 159859
90 Ga0207692_10028790 3300025898 Bacteria 2633
91 Ga0207688_10012512 3300025901 Bacteria 4618
92 Ga0207705_10048827 3300025909 Bacteria 3045
93 Ga0207707_10064264 3300025912 Bacteria 3194
94 Ga0207695_10015973 3300025913 Bacteria 8812
95 Ga0207695_10437053 3300025913 Bacteria 1192
96 Ga0207671_10325428 3300025914 Bacteria 1217
97 Ga0207663_10010162 3300025916 Bacteria 4996
98 Ga0207660_10048893 3300025917 Bacteria 2994
99 Ga0207649_10087232 3300025920 Bacteria 2035
100 Ga0207652_10011648 3300025921 Bacteria 7095
101 Ga0207687_10011414 3300025927 Bacteria 5807
102 Ga0207687_10336952 3300025927 Bacteria 1225
103 Ga0207700_10022970 3300025928 Bacteria 4289
104 Ga0207664_10001425 3300025929 Bacteria 15730
105 Ga0207690_10035400 3300025932 Bacteria 3225
106 Ga0207690_10090518 3300025932 Bacteria 2160
107 Ga0207686_10652391 3300025934 Bacteria 833
108 Ga0207711_10311263 3300025941 Bacteria 1454
109 Ga0207661_10004877 3300025944 Bacteria 9402
110 Ga0207661_10108538 3300025944 Bacteria 2343
111 Ga0207661_10583919 3300025944 Bacteria 1025
112 Ga0207679_10334655 3300025945 Bacteria 1315
113 Ga0207712_10019421 3300025961 Bacteria 4437
114 Ga0207668_10005688 3300025972 Bacteria 7341
115 Ga0207640_10195627 3300025981 Bacteria 1528
116 Ga0207640_10514418 3300025981 Bacteria 999
117 Ga0207708_10032062 3300026075 Bacteria 3990
118 Ga0207702_10067424 3300026078 Bacteria 3071
119 Ga0207702_10507884 3300026078 Bacteria 1176
120 Ga0207648_10564928 3300026089 Bacteria 1046
121 Ga0207674_10130483 3300026116 Bacteria 2477
122 Ga0207675_100020535 3300026118 Bacteria 6156
123 Ga0207698_10345073 3300026142 Bacteria 1404
124 Ga0207428_10446133 3300027907 Bacteria 944
125 Ga0265334_10000012 3300028573 Bacteria 174358
126 Ga0265336_10005755 3300028666 Bacteria 4537
127 Ga0265338_10007079 3300028800 Bacteria 14059
128 Ga0265324_10003704 3300029957 Bacteria 7169
129 Ga0265340_10136771 3300031247 Bacteria 1122
130 Ga0307408_100965018 3300031548 Bacteria 784
131 Ga0265314_10215016 3300031711 Bacteria 1126
132 Ga0307405_10037683 3300031731 Bacteria 2908
133 Ga0307405_10567716 3300031731 Bacteria 921
134 Ga0307413_10008363 3300031824 Bacteria 4881
135 Ga0307413_10391732 3300031824 Bacteria 1086
136 Ga0307410_10045011 3300031852 Bacteria 2935
137 Ga0307410_10082430 3300031852 Bacteria 2263
138 Ga0307410_10179660 3300031852 Bacteria 1601
139 Ga0307410_10313131 3300031852 Bacteria 1243
140 Ga0307410_10547982 3300031852 Bacteria 958
141 Ga0307410_10581827 3300031852 Bacteria 932
142 Ga0307406_10049604 3300031901 Bacteria 2657
143 Ga0307407_10006213 3300031903 Bacteria 5279
144 Ga0307407_10132015 3300031903 Bacteria 1599
145 Ga0307412_10445294 3300031911 Bacteria 1066
146 Ga0307412_10682090 3300031911 Bacteria 880
147 Ga0307409_100037919 3300031995 Bacteria 3558
148 Ga0307409_100061494 3300031995 Bacteria 2935
149 Ga0307409_100065389 3300031995 Bacteria 2861
150 Ga0307409_100658525 3300031995 Bacteria 1042
151 Ga0307416_100011172 3300032002 Bacteria 5970
152 Ga0307416_100099657 3300032002 Bacteria 2524
153 Ga0307416_100487553 3300032002 Bacteria 1294
154 Ga0307414_10052204 3300032004 Bacteria 2844
155 Ga0307411_10158073 3300032005 Bacteria 1693
156 Ga0307411_10749200 3300032005 Bacteria 855
157 Ga0307415_100023158 3300032126 Bacteria 3850
158 Ga0307415_100286985 3300032126 Bacteria 1356
159 Ga0307415_100371774 3300032126 Bacteria 1211
160 Ga0307415_100638883 3300032126 Bacteria 952
161 Ga0307415_101133315 3300032126 Bacteria 734
162 Ga0395900_0113730 3300037418 Bacteria 2778
163 Ga0395901_0001743 3300038443 Bacteria 22473
164 Ga0395901_0494984 3300038443 Bacteria 1245
165 Ga0395901_0532149 3300038443 Bacteria 1193
166 Ga0395901_0676744 3300038443 Bacteria 1032
167 Ga0395901_1103501 3300038443 Bacteria 764
168 Ga0436365_1439885 3300039437 Bacteria 10548
169 Ga0436363_0043966 3300039450 Bacteria 1451
170 Ga0436363_0805533 3300039450 Bacteria 51825
171 Ga0439464_0042361 3300042439 Bacteria 1300
172 Ga0466963_0009374 3300044694 Bacteria 5895
173 Ga0466967_0740538 3300045976 Bacteria 975
174 Ga0495653_0001520 3300046463 Bacteria 18130
175 Ga0495584_0228446 3300046491 Bacteria 946
176 Ga0495596_0034046 3300046500 Bacteria 2025
177 Ga0495618_0000805 3300046514 Bacteria 21850
178 Ga0495630_0000440 3300046517 Bacteria 31661
179 Ga0495637_0102674 3300046520 Bacteria 1116
180 Ga0495645_0000021 3300046543 Bacteria 137604
181 Ga0495668_0020720 3300046616 Bacteria 3779
182 Ga0495661_0245153 3300046665 Bacteria 917
183 Ga0495657_0000017 3300046675 Bacteria 174558
184 Ga0495599_0223880 3300046678 Bacteria 1150
185 Ga0495604_0000063 3300047317 Bacteria 92821
186 Ga0495683_0215134 3300047323 Bacteria 860
187 Ga0495684_0021117 3300047471 Bacteria 5016
188 Ga0496102_0000002 3300048905 Bacteria 814588
189 Ga0496102_0571216 3300048905 Bacteria 1054
190 Ga0496103_0000047 3300048906 Bacteria 161130
191 Ga0496103_0147963 3300048906 Bacteria 1504
192 Ga0496104_0017521 3300048907 Bacteria 6525
193 Ga0496105_0005885 3300048908 Bacteria 9350
194 Ga0496107_0297931 3300048910 Bacteria 1200
195 Ga0496109_0521016 3300048912 Bacteria 1122
196 Ga0496111_0062506 3300048914 Bacteria 2700
197 Ga0496111_0588558 3300048914 Bacteria 815
198 Ga0496112_0009005 3300048915 Bacteria 8962
199 Ga0496112_0203859 3300048915 Bacteria 1936
200 Ga0496113_0068133 3300048916 Bacteria 2700
201 Ga0496113_0145254 3300048916 Bacteria 1868
202 Ga0496113_0614139 3300048916 Bacteria 870
203 Ga0496114_0487862 3300048917 Bacteria 1090
204 Ga0496115_0437973 3300048918 Bacteria 1057
205 Ga0501039_0094499 3300049575 Bacteria 2331
206 Ga0501040_0006425 3300049576 Bacteria 7634
207 Ga0501040_0073614 3300049576 Bacteria 2361
208 Ga0501040_0385964 3300049576 Bacteria 1005
209 Ga0501041_0037894 3300049577 Bacteria 2923
210 Ga0501041_0076500 3300049577 Bacteria 2059
211 Ga0501048_0020089 3300049582 Bacteria 4900
212 Ga0501068_0065383 3300049584 Bacteria 2214
213 Ga0501071_0313456 3300049587 Bacteria 1190
214 Ga0501072_0044761 3300049588 Bacteria 3480
215 Ga0501075_0097776 3300049591 Bacteria 2228
216 Ga0501076_0169749 3300049592 Bacteria 1778
217 Ga0501077_0224142 3300049593 Bacteria 1195
218 Ga0501079_0025892 3300049741 Bacteria 4500
219 Ga0501079_0057749 3300049741 Bacteria 2994
220 Ga0501079_0571679 3300049741 Bacteria 889
221 Ga0501080_0302996 3300049742 Bacteria 1449
222 Ga0501081_0601842 3300049743 Bacteria 823
223 Ga0501045_0198689 3300049824 Bacteria 1494
224 Ga0501045_0344896 3300049824 Bacteria 1108
225 nmdc:mga05p37_115856_c1 3300050507 Bacteria 3294
226 nmdc:mga05p37_203177_c1 3300050507 Bacteria 2398
227 nmdc:mga05p37_393901_c1 3300050507 Bacteria 1619
228 nmdc:mga05p37_8057_c1 3300050507 Bacteria 12446
229 nmdc:mga05p37_87933_c2 3300050507 Bacteria 1110
230 nmdc:mga09592_3784_c1 3300050508 Bacteria 12177
231 nmdc:mga09592_45954_c1 3300050508 Bacteria 3678
232 nmdc:mga09592_47137_c1 3300050508 Bacteria 3631
233 nmdc:mga0qj67_311044_c1 3300050509 Bacteria 1276
234 nmdc:mga0qj67_374077_c1 3300050509 Bacteria 1150
235 nmdc:mga0qj67_8795_c1 3300050509 Bacteria 7495
236 nmdc:mga06r32_155003_c1 3300050510 Bacteria 2271
237 nmdc:mga06r32_857695_c1 3300050510 Bacteria 866
238 nmdc:mga06r32_8820_c1 3300050510 Bacteria 9084
239 nmdc:mga08y16_624394_c1 3300050511 Bacteria 1084
240 Ga0495601_0017341 3300053077 Bacteria 4369
241 Ga0495601_0021478 3300053077 Bacteria 3954
242 Ga0495612_0000214 3300053078 Bacteria 24528
243 Ga0495655_0002585 3300053083 Bacteria 2895
244 Ga0530510_0019016 3300061734 Bacteria 4873
245 Ga0530510_0686369 3300061734 Bacteria 780

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053077 Ga0495601_0021478 Ga0495601_0021478_396_1109 178
2 3300009093 Ga0105240_10127110 Ga0105240_101271103 181
3 3300031901 Ga0307406_10049604 Ga0307406_100496041 181
4 3300047317 Ga0495604_0000063 Ga0495604_0000063_5683_6282 181
5 3300006844 Ga0075428_100373500 Ga0075428_1003735002 182
6 3300006846 Ga0075430_100787316 Ga0075430_1007873161 182
7 3300009094 Ga0111539_10697901 Ga0111539_106979012 182
8 3300009147 Ga0114129_10144407 Ga0114129_101444072 182
9 3300027907 Ga0207428_10446133 Ga0207428_104461332 182
10 3300050511 nmdc:mga08y16_624394_c1 nmdc:mga08y16_624394_c1_391_1014 182
11 3300005981 Ga0081538_10002493 Ga0081538_1000249316 183
12 3300006844 Ga0075428_100277661 Ga0075428_1002776613 183
13 3300020081 Ga0206354_10595406 Ga0206354_105954063 183
14 3300046520 Ga0495637_0102674 Ga0495637_0102674_272_898 183
15 3300048905 Ga0496102_0000002 Ga0496102_0000002_127686_128291 183
16 3300048906 Ga0496103_0000047 Ga0496103_0000047_21711_22316 183
17 3300050509 nmdc:mga0qj67_374077_c1 nmdc:mga0qj67_374077_c1_56_679 183
18 3300005327 Ga0070658_10564603 Ga0070658_105646032 184
19 3300005329 Ga0070683_100045287 Ga0070683_1000452872 184
20 3300005336 Ga0070680_100000851 Ga0070680_1000008512 184
21 3300005337 Ga0070682_100073077 Ga0070682_1000730772 184
22 3300005344 Ga0070661_100029904 Ga0070661_1000299045 184
23 3300005366 Ga0070659_100049719 Ga0070659_1000497192 184
24 3300005458 Ga0070681_10019390 Ga0070681_100193906 184
25 3300005530 Ga0070679_100004554 Ga0070679_1000045549 184
26 3300005535 Ga0070684_100020541 Ga0070684_1000205413 184
27 3300005564 Ga0070664_100119515 Ga0070664_1001195152 184
28 3300005578 Ga0068854_100296004 Ga0068854_1002960042 184
29 3300005614 Ga0068856_100058949 Ga0068856_1000589492 184
30 3300009545 Ga0105237_10087442 Ga0105237_100874422 184
31 3300009551 Ga0105238_10021833 Ga0105238_100218332 184
32 3300013102 Ga0157371_10105213 Ga0157371_101052132 184
33 3300013104 Ga0157370_10017809 Ga0157370_100178098 184
34 3300013105 Ga0157369_10063151 Ga0157369_100631513 184
35 3300013307 Ga0157372_10061492 Ga0157372_100614922 184
36 3300020070 Ga0206356_11902535 Ga0206356_119025352 184
37 3300020082 Ga0206353_10343938 Ga0206353_103439382 184
38 3300025909 Ga0207705_10048827 Ga0207705_100488273 184
39 3300025912 Ga0207707_10064264 Ga0207707_100642643 184
40 3300025914 Ga0207671_10325428 Ga0207671_103254282 184
41 3300025917 Ga0207660_10048893 Ga0207660_100488932 184
42 3300025920 Ga0207649_10087232 Ga0207649_100872323 184
43 3300025921 Ga0207652_10011648 Ga0207652_100116484 184
44 3300025932 Ga0207690_10035400 Ga0207690_100354004 184
45 3300025944 Ga0207661_10004877 Ga0207661_1000487710 184
46 3300025945 Ga0207679_10334655 Ga0207679_103346552 184
47 3300025981 Ga0207640_10195627 Ga0207640_101956271 184
48 3300026078 Ga0207702_10067424 Ga0207702_100674242 184
49 3300026116 Ga0207674_10130483 Ga0207674_101304832 184
50 3300031995 Ga0307409_100037919 Ga0307409_1000379192 184
51 3300048914 Ga0496111_0588558 Ga0496111_0588558_141_734 184
52 3300005530 Ga0070679_100611623 Ga0070679_1006116232 185
53 3300031852 Ga0307410_10581827 Ga0307410_105818272 186
54 3300044694 Ga0466963_0009374 Ga0466963_0009374_1643_2266 187
55 3300009147 Ga0114129_10385073 Ga0114129_103850732 189
56 3300014969 Ga0157376_10082796 Ga0157376_100827962 189
57 3300031731 Ga0307405_10037683 Ga0307405_100376832 189
58 3300031824 Ga0307413_10008363 Ga0307413_100083633 189
59 3300031852 Ga0307410_10045011 Ga0307410_100450112 189
60 3300031852 Ga0307410_10179660 Ga0307410_101796602 189
61 3300031903 Ga0307407_10006213 Ga0307407_100062134 189
62 3300031903 Ga0307407_10132015 Ga0307407_101320152 189
63 3300031911 Ga0307412_10682090 Ga0307412_106820902 189
64 3300031995 Ga0307409_100065389 Ga0307409_1000653892 189
65 3300032002 Ga0307416_100011172 Ga0307416_1000111726 189
66 3300032004 Ga0307414_10052204 Ga0307414_100522042 189
67 3300032005 Ga0307411_10158073 Ga0307411_101580732 189
68 3300032005 Ga0307411_10749200 Ga0307411_107492001 189
69 3300032126 Ga0307415_100023158 Ga0307415_1000231584 189
70 3300032126 Ga0307415_100638883 Ga0307415_1006388832 189
71 3300050507 nmdc:mga05p37_203177_c1 nmdc:mga05p37_203177_c1_122_718 189
72 3300005435 Ga0070714_100012519 Ga0070714_1000125194 190
73 3300025929 Ga0207664_10001425 Ga0207664_100014254 190
74 3300031548 Ga0307408_100965018 Ga0307408_1009650181 190
75 3300031995 Ga0307409_100658525 Ga0307409_1006585252 190
76 3300048907 Ga0496104_0017521 Ga0496104_0017521_949_1521 190
77 3300048908 Ga0496105_0005885 Ga0496105_0005885_4820_5392 190
78 3300048912 Ga0496109_0521016 Ga0496109_0521016_174_746 190
79 3300005329 Ga0070683_100090950 Ga0070683_1000909503 191
80 3300005437 Ga0070710_10000005 Ga0070710_10000005191 191
81 3300025898 Ga0207692_10000009 Ga0207692_10000009101 191
82 3300025913 Ga0207695_10437053 Ga0207695_104370532 191
83 3300025944 Ga0207661_10108538 Ga0207661_101085382 191
84 3300046616 Ga0495668_0020720 Ga0495668_0020720_1440_2066 191
85 3300046665 Ga0495661_0245153 Ga0495661_0245153_145_768 191
86 3300048916 Ga0496113_0068133 Ga0496113_0068133_478_1056 191
87 3300053083 Ga0495655_0002585 Ga0495655_0002585_605_1231 191
88 3300005985 Ga0081539_10000479 Ga0081539_100004792 192
89 3300005441 Ga0070700_100285158 Ga0070700_1002851581 193
90 3300005578 Ga0068854_100270115 Ga0068854_1002701152 193
91 3300005615 Ga0070702_100422076 Ga0070702_1004220761 193
92 3300006846 Ga0075430_100000538 Ga0075430_10000053815 193
93 3300006847 Ga0075431_100010005 Ga0075431_1000100057 193
94 3300006880 Ga0075429_100226643 Ga0075429_1002266432 193
95 3300049577 Ga0501041_0076500 Ga0501041_0076500_1050_1664 193
96 3300049584 Ga0501068_0065383 Ga0501068_0065383_1314_1928 193
97 3300049741 Ga0501079_0025892 Ga0501079_0025892_2313_2927 193
98 3300049742 Ga0501080_0302996 Ga0501080_0302996_95_709 193
99 3300050508 nmdc:mga09592_47137_c1 nmdc:mga09592_47137_c1_1381_1965 193
100 3300050509 nmdc:mga0qj67_311044_c1 nmdc:mga0qj67_311044_c1_323_907 193
101 3300050510 nmdc:mga06r32_8820_c1 nmdc:mga06r32_8820_c1_2477_3061 193
102 3300025913 Ga0207695_10015973 Ga0207695_100159738 194
103 3300046543 Ga0495645_0000021 Ga0495645_0000021_19149_19787 194
104 3300046678 Ga0495599_0223880 Ga0495599_0223880_141_779 194
105 3300050508 nmdc:mga09592_3784_c1 nmdc:mga09592_3784_c1_2666_3256 194
106 3300005436 Ga0070713_100240571 Ga0070713_1002405712 195
107 3300005459 Ga0068867_100420343 Ga0068867_1004203432 195
108 3300005564 Ga0070664_100682305 Ga0070664_1006823052 195
109 3300005616 Ga0068852_100074063 Ga0068852_1000740632 195
110 3300005844 Ga0068862_100521260 Ga0068862_1005212602 195
111 3300005981 Ga0081538_10016639 Ga0081538_100166394 195
112 3300009098 Ga0105245_10731567 Ga0105245_107315672 195
113 3300009176 Ga0105242_11008224 Ga0105242_110082242 195
114 3300009177 Ga0105248_10401775 Ga0105248_104017752 195
115 3300009553 Ga0105249_11944940 Ga0105249_119449401 195
116 3300010375 Ga0105239_10599751 Ga0105239_105997511 195
117 3300013105 Ga0157369_11160556 Ga0157369_111605562 195
118 3300020081 Ga0206354_11138651 Ga0206354_111386512 195
119 3300021377 Ga0213874_10000286 Ga0213874_100002862 195
120 3300021384 Ga0213876_10004599 Ga0213876_100045992 195
121 3300025927 Ga0207687_10336952 Ga0207687_103369522 195
122 3300025928 Ga0207700_10022970 Ga0207700_100229702 195
123 3300025934 Ga0207686_10652391 Ga0207686_106523912 195
124 3300025941 Ga0207711_10311263 Ga0207711_103112632 195
125 3300025944 Ga0207661_10583919 Ga0207661_105839192 195
126 3300025981 Ga0207640_10514418 Ga0207640_105144181 195
127 3300026078 Ga0207702_10507884 Ga0207702_105078842 195
128 3300026142 Ga0207698_10345073 Ga0207698_103450732 195
129 3300028573 Ga0265334_10000012 Ga0265334_1000001290 195
130 3300028666 Ga0265336_10005755 Ga0265336_100057554 195
131 3300028800 Ga0265338_10007079 Ga0265338_100070799 195
132 3300029957 Ga0265324_10003704 Ga0265324_100037044 195
133 3300031247 Ga0265340_10136771 Ga0265340_101367712 195
134 3300031711 Ga0265314_10215016 Ga0265314_102150162 195
135 3300031731 Ga0307405_10567716 Ga0307405_105677162 195
136 3300031824 Ga0307413_10391732 Ga0307413_103917321 195
137 3300031852 Ga0307410_10313131 Ga0307410_103131312 195
138 3300032126 Ga0307415_100286985 Ga0307415_1002869852 195
139 3300038443 Ga0395901_0001743 Ga0395901_0001743_2582_3178 195
140 3300038443 Ga0395901_0532149 Ga0395901_0532149_491_1078 195
141 3300038443 Ga0395901_1103501 Ga0395901_1103501_90_677 195
142 3300039437 Ga0436365_1439885 Ga0436365_1439885_7010_7597 195
143 3300039450 Ga0436363_0043966 Ga0436363_0043966_32_622 195
144 3300039450 Ga0436363_0805533 Ga0436363_0805533_13414_14001 195
145 3300045976 Ga0466967_0740538 Ga0466967_0740538_11_598 195
146 3300048905 Ga0496102_0571216 Ga0496102_0571216_294_881 195
147 3300048906 Ga0496103_0147963 Ga0496103_0147963_624_1211 195
148 3300048910 Ga0496107_0297931 Ga0496107_0297931_427_1014 195
149 3300048914 Ga0496111_0062506 Ga0496111_0062506_1569_2156 195
150 3300048915 Ga0496112_0009005 Ga0496112_0009005_7959_8546 195
151 3300048915 Ga0496112_0203859 Ga0496112_0203859_1298_1885 195
152 3300048916 Ga0496113_0145254 Ga0496113_0145254_585_1172 195
153 3300048916 Ga0496113_0614139 Ga0496113_0614139_61_648 195
154 3300048917 Ga0496114_0487862 Ga0496114_0487862_476_1063 195
155 3300048918 Ga0496115_0437973 Ga0496115_0437973_381_968 195
156 3300005439 Ga0070711_100000559 Ga0070711_1000005597 196
157 3300005985 Ga0081539_10020164 Ga0081539_100201643 196
158 3300025916 Ga0207663_10010162 Ga0207663_100101624 196
159 3300031852 Ga0307410_10547982 Ga0307410_105479821 196
160 3300032002 Ga0307416_100487553 Ga0307416_1004875532 196
161 3300032126 Ga0307415_100371774 Ga0307415_1003717742 196
162 3300032126 Ga0307415_101133315 Ga0307415_1011333151 196
163 3300037418 Ga0395900_0113730 Ga0395900_0113730_1823_2437 196
164 3300038443 Ga0395901_0494984 Ga0395901_0494984_521_1135 196
165 3300005545 Ga0070695_100340547 Ga0070695_1003405472 197
166 3300005981 Ga0081538_10030924 Ga0081538_100309243 197
167 3300005981 Ga0081538_10036142 Ga0081538_100361422 197
168 3300031852 Ga0307410_10082430 Ga0307410_100824302 197
169 3300031995 Ga0307409_100061494 Ga0307409_1000614942 197
170 3300032002 Ga0307416_100099657 Ga0307416_1000996572 197
171 3300049741 Ga0501079_0571679 Ga0501079_0571679_72_674 197
172 3300049743 Ga0501081_0601842 Ga0501081_0601842_50_649 197
173 3300050507 nmdc:mga05p37_393901_c1 nmdc:mga05p37_393901_c1_569_1168 197
174 3300050507 nmdc:mga05p37_8057_c1 nmdc:mga05p37_8057_c1_3011_3607 197
175 3300050510 nmdc:mga06r32_155003_c1 nmdc:mga06r32_155003_c1_1376_1975 197
176 3300050510 nmdc:mga06r32_857695_c1 nmdc:mga06r32_857695_c1_230_829 197
177 3300005937 Ga0081455_10065486 Ga0081455_100654865 198
178 3300005981 Ga0081538_10001168 Ga0081538_1000116819 198
179 3300005981 Ga0081538_10023626 Ga0081538_100236265 198
180 3300005981 Ga0081538_10026578 Ga0081538_100265785 198
181 3300031911 Ga0307412_10445294 Ga0307412_104452941 198
182 3300042439 Ga0439464_0042361 Ga0439464_0042361_209_808 198
183 3300049575 Ga0501039_0094499 Ga0501039_0094499_1551_2153 198
184 3300049576 Ga0501040_0006425 Ga0501040_0006425_3636_4235 198
185 3300049576 Ga0501040_0073614 Ga0501040_0073614_81_683 198
186 3300049577 Ga0501041_0037894 Ga0501041_0037894_441_1040 198
187 3300049582 Ga0501048_0020089 Ga0501048_0020089_2122_2724 198
188 3300049587 Ga0501071_0313456 Ga0501071_0313456_62_661 198
189 3300049588 Ga0501072_0044761 Ga0501072_0044761_1772_2371 198
190 3300049591 Ga0501075_0097776 Ga0501075_0097776_951_1553 198
191 3300049592 Ga0501076_0169749 Ga0501076_0169749_921_1520 198
192 3300049593 Ga0501077_0224142 Ga0501077_0224142_434_1036 198
193 3300049741 Ga0501079_0057749 Ga0501079_0057749_1938_2540 198
194 3300049824 Ga0501045_0198689 Ga0501045_0198689_189_788 198
195 3300049824 Ga0501045_0344896 Ga0501045_0344896_330_932 198
196 3300053078 Ga0495612_0000214 Ga0495612_0000214_3903_4568 198
197 3300061734 Ga0530510_0019016 Ga0530510_0019016_4060_4659 198
198 3300061734 Ga0530510_0686369 Ga0530510_0686369_49_651 198
199 3300005437 Ga0070710_10145043 Ga0070710_101450431 199
200 3300005981 Ga0081538_10005319 Ga0081538_100053197 199
201 3300025898 Ga0207692_10028790 Ga0207692_100287902 199
202 3300053077 Ga0495601_0017341 Ga0495601_0017341_284_952 199
203 3300005981 Ga0081538_10000993 Ga0081538_1000099319 200
204 3300049576 Ga0501040_0385964 Ga0501040_0385964_238_843 200
205 3300005578 Ga0068854_100104931 Ga0068854_1001049312 201
206 3300005840 Ga0068870_10519990 Ga0068870_105199902 201
207 3300009147 Ga0114129_10203348 Ga0114129_102033481 201
208 3300025932 Ga0207690_10090518 Ga0207690_100905181 201
209 3300026089 Ga0207648_10564928 Ga0207648_105649282 201
210 3300038443 Ga0395901_0676744 Ga0395901_0676744_383_994 201
211 3300046491 Ga0495584_0228446 Ga0495584_0228446_275_913 201
212 3300046500 Ga0495596_0034046 Ga0495596_0034046_467_1105 201
213 3300047323 Ga0495683_0215134 Ga0495683_0215134_61_696 201
214 3300050507 nmdc:mga05p37_87933_c2 nmdc:mga05p37_87933_c2_364_993 201
215 3300005341 Ga0070691_10045546 Ga0070691_100455462 202
216 3300005441 Ga0070700_100006365 Ga0070700_1000063652 202
217 3300005457 Ga0070662_100002622 Ga0070662_1000026224 202
218 3300005546 Ga0070696_100089009 Ga0070696_1000890091 202
219 3300005719 Ga0068861_100012951 Ga0068861_1000129511 202
220 3300005981 Ga0081538_10004281 Ga0081538_100042812 202
221 3300009098 Ga0105245_10007275 Ga0105245_100072756 202
222 3300009176 Ga0105242_10447086 Ga0105242_104470861 202
223 3300009553 Ga0105249_10001540 Ga0105249_100015408 202
224 3300025901 Ga0207688_10012512 Ga0207688_100125123 202
225 3300025927 Ga0207687_10011414 Ga0207687_100114143 202
226 3300025961 Ga0207712_10019421 Ga0207712_100194213 202
227 3300025972 Ga0207668_10005688 Ga0207668_100056884 202
228 3300026075 Ga0207708_10032062 Ga0207708_100320622 202
229 3300026118 Ga0207675_100020535 Ga0207675_1000205356 202
230 3300046514 Ga0495618_0000805 Ga0495618_0000805_6522_7199 202
231 3300046463 Ga0495653_0001520 Ga0495653_0001520_13934_14644 203
232 3300006844 Ga0075428_100005801 Ga0075428_1000058015 205
233 3300006846 Ga0075430_100064279 Ga0075430_1000642792 205
234 3300006880 Ga0075429_100069033 Ga0075429_1000690332 205
235 3300009147 Ga0114129_10000941 Ga0114129_100009418 205
236 3300013307 Ga0157372_10813340 Ga0157372_108133402 205
237 3300050507 nmdc:mga05p37_115856_c1 nmdc:mga05p37_115856_c1_1999_2661 205
238 3300050508 nmdc:mga09592_45954_c1 nmdc:mga09592_45954_c1_1557_2219 205
239 3300050509 nmdc:mga0qj67_8795_c1 nmdc:mga0qj67_8795_c1_74_736 205
240 3300046517 Ga0495630_0000440 Ga0495630_0000440_21983_22675 206
241 3300046675 Ga0495657_0000017 Ga0495657_0000017_146652_147344 206
242 3300047471 Ga0495684_0021117 Ga0495684_0021117_3531_4223 206
243 3300003373 JGI25407J50210_10004821 JGI25407J50210_100048213 208
244 3300005981 Ga0081538_10003540 Ga0081538_1000354010 208
245 3300005981 Ga0081538_10004828 Ga0081538_100048285 208

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01327

Pep_deformylase

Polypeptide deformylase

60

210

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ws1-assembly1.cif.gz_A structure analysis of peptide deformylase from bacillus cereus 0.9409 52 188
1lme-assembly2.cif.gz_B crystal structure of peptide deformylase from thermotoga maritima 0.9336 49 187
6jf7-assembly1.cif.gz_B k3u bound crystal structure of class i type b peptide deformylase from acinetobacter baumannii 0.9171 49 185
1rl4-assembly1.cif.gz_A plasmodium falciparum peptide deformylase complex with inhibitor 0.9124 50 203
6jf4-assembly1.cif.gz_A k1u bound crystal structure of class i type b peptide deformylase from acinetobacter baumannii 0.9114 49 185
ID Description Score Start End Superfamily
1ws1A00 Alpha Beta;Alpha-Beta Complex;Peptide Deformylase;Peptide deformylase 0.9409 52 188 3.90.45.10
af_Q2G265_1_160_3.90.45.10 Alpha Beta;Alpha-Beta Complex;Peptide Deformylase;Peptide deformylase 0.9406 51 188 3.90.45.10
1lmeB00 Alpha Beta;Alpha-Beta Complex;Peptide Deformylase;Peptide deformylase 0.9358 49 187 3.90.45.10
af_Q4D3X8_38_196_3.90.45.10 Alpha Beta;Alpha-Beta Complex;Peptide Deformylase;Peptide deformylase 0.923 53 186 3.90.45.10
af_Q9VGY2_49_232_3.90.45.10 Alpha Beta;Alpha-Beta Complex;Peptide Deformylase;Peptide deformylase 0.9085 48 190 3.90.45.10
ID Description Score Start End GO Terms
AF-A0A6B3HYN1-F1-model_v4 Peptide deformylase 0.9547 87 188 GO:0006412
GO:0042586
GO:0043686
AF-A0A3D5VDI9-F1-model_v4 Peptide deformylase (PDF) (EC 3.5.1.88) (Polypeptide deformylase) 0.9525 49 186 GO:0006412
GO:0042586
GO:0043686
GO:0046872
AF-A0A2H0S623-F1-model_v4 Peptide deformylase (PDF) (EC 3.5.1.88) (Polypeptide deformylase) 0.95 52 186 GO:0006412
GO:0042586
GO:0043686
GO:0046872
AF-A0A1N7K3Z9-F1-model_v4 Peptide deformylase 0.9493 111 185 GO:0042586
AF-A0A2M7UWQ6-F1-model_v4 Peptide deformylase 0.9475 51 177 GO:0042586
GO:0043686

Feature Viewer

pLDDT pTM Quality
82.2 0.76 High
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Predicted Structure (AlphaFold2)

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