F356906

General Info

Members Datasets Scaffolds Average Seq Length
244 136 488 866

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0002679|Ga0500616_0002679_9915_12875
Length 919
Sequence VNKYPRRWKPPAAETRGRARLVKYQEPKQGFRGFLRRWLRRLTRPVVLVPIGIVAAVVITVLVYYWTIFSQRIDQLLNGDVFTRTAGIYAAPKMLHAGQEITVEELVVYLKAANYVEKSQQGDAARGRYRVQDLAASNFAPPPGKPKQRASGYKSGAVVEVEPSNDAIVDGQKVFHPLRIQFGAGGTMIASLGDLVSHAPFQTAELEPQLISSVAGQDRSKRRVIGFQDLPPHLIKAITTTEDRSFFEHWGINVRGIARAFFRRYDADPNSPISNQGGSSITQQLVKNLLLSPERTWKRKASEAYMSVILETRLSKQEIFALYCNQVYLGQQAGFSVNGFGEAAESYFGKDVSTITLPEAAFLAGIIRSPNRYNPYRDLNTATQRRNQVLDSMAETGAITTQAAADAKASPLKVVAAKTRIDLSDAPYFADYVQNNLAEIIPDSGMTQHLRVYTTLDMDLQRAAVNSVNKQLDLLDKVVAKRGVEPGTLQASLVAMNVKTGDIIAMVGGRDYTKSQLNRATDAMRQPGSVFKPFVYATALNTAYDPVPRVITAADVFKDEPKTFFYEGQTYSPGNFGDRYTNGPLTLRDALVNSKNVITVEVAMDVTIGRVMALAAKAGLPHVDKAYPAMALGASEATPLQRVTTGTGTTVATPTGQRNEVLRPDVAYLMTDLLKDVVNRGTAAKLNSRGFHNEAGKTGFTSRDGWFAGFTPSIVCVVYVGFDDGSQLGITGADAALPIWADFMTAALAEHPEWNGDWQRPESIQEAEIDIRTGVVIGTPAADGSTEPSEVPAEFRRKELFISGTVPGGVRPPLPEDGTEAPPVPDITPYDPDLEPSPAVPDDQGVPAPRSTSRNVTIENGTVTVDIDPTTGLLAASTCPVIRTKTYIIGKEPHQYCGPQYHGGVAPAVREERPRKASP

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
26 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
27 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
41 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
42 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
43 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
53 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
54 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
55 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
66 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
67 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
69 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
81 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
117 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
123 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
124 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
127 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
130 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.41
Nodule 0
Rhizoplane 0.82
Rhizosphere 96.31
Stem 0
Stem Tuber 0
Unclassified 13.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0002679 3300053153 Bacteria 14476
2 JGI24748J21848_1000008 3300002074 Bacteria 191483
3 JGI24034J26672_10000002 3300002239 Bacteria 925353
4 JGI24751J29686_10000137 3300002459 Bacteria 36592
5 JGI25406J46586_10002897 3300003203 Bacteria 8090
6 Ga0065714_10064469 3300005288 Bacteria 61986
7 Ga0065704_10072426 3300005289 Bacteria 8542
8 Ga0065712_10000127 3300005290 Bacteria 117106
9 Ga0065715_10090628 3300005293 Bacteria 6707
10 Ga0065715_10102421 3300005293 Bacteria 3116
11 Ga0065707_10003181 3300005295 Unclassified 4060
12 Ga0070676_10021243 3300005328 Bacteria 3633
13 Ga0070690_100002455 3300005330 Bacteria 9966
14 Ga0070670_100004087 3300005331 Bacteria 12190
15 Ga0070670_100005843 3300005331 Bacteria 10403
16 Ga0070670_100072976 3300005331 Unclassified 2948
17 Ga0068869_100012749 3300005334 Bacteria 5560
18 Ga0068869_100023730 3300005334 Unclassified 4242
19 Ga0070666_10030433 3300005335 Unclassified 3556
20 Ga0070680_100012705 3300005336 Bacteria 6545
21 Ga0070682_100006506 3300005337 Bacteria 6558
22 Ga0070682_100014470 3300005337 Bacteria 4560
23 Ga0068868_100039850 3300005338 Bacteria 3653
24 Ga0070660_100010393 3300005339 Bacteria 6580
25 Ga0070689_100001418 3300005340 Bacteria 15284
26 Ga0070661_100004333 3300005344 Bacteria 9790
27 Ga0070692_10013990 3300005345 Unclassified 3755
28 Ga0070669_100003156 3300005353 Bacteria 11851
29 Ga0070669_100003681 3300005353 Bacteria 11059
30 Ga0070659_100002545 3300005366 Bacteria 12966
31 Ga0070703_10000329 3300005406 Bacteria 21473
32 Ga0070700_100000155 3300005441 Bacteria 39898
33 Ga0070700_100019231 3300005441 Unclassified 3939
34 Ga0070694_100001782 3300005444 Bacteria 12747
35 Ga0070694_100003337 3300005444 Bacteria 9605
36 Ga0070694_100017243 3300005444 Unclassified 4561
37 Ga0070694_100024819 3300005444 Unclassified 3872
38 Ga0070708_100000123 3300005445 Bacteria 52148
39 Ga0070662_100016255 3300005457 Bacteria 4993
40 Ga0070681_10001930 3300005458 Bacteria 18715
41 Ga0070681_10012645 3300005458 Bacteria 8373
42 Ga0070681_10022413 3300005458 Bacteria 6342
43 Ga0068867_100003147 3300005459 Bacteria 11634
44 Ga0070706_100000068 3300005467 Bacteria 119756
45 Ga0070706_100008396 3300005467 Bacteria 9624
46 Ga0070706_100011966 3300005467 Bacteria 8051
47 Ga0070706_100013729 3300005467 Bacteria 7488
48 Ga0070707_100002790 3300005468 Bacteria 16625
49 Ga0070707_100010939 3300005468 Bacteria 8451
50 Ga0070707_100012170 3300005468 Bacteria 8031
51 Ga0070707_100043609 3300005468 Bacteria 4293
52 Ga0070698_100000671 3300005471 Bacteria 36522
53 Ga0070698_100002252 3300005471 Bacteria 21345
54 Ga0070698_100022600 3300005471 Bacteria 6578
55 Ga0070698_100023164 3300005471 Bacteria 6492
56 Ga0070698_100026737 3300005471 Bacteria 6003
57 Ga0070699_100001087 3300005518 Bacteria 25323
58 Ga0070679_100001494 3300005530 Bacteria 20758
59 Ga0070697_100000292 3300005536 Bacteria 40131
60 Ga0070697_100000395 3300005536 Bacteria 33783
61 Ga0070697_100008618 3300005536 Bacteria 7961
62 Ga0070697_100021712 3300005536 Bacteria 5088
63 Ga0068853_100010093 3300005539 Bacteria 7630
64 Ga0068853_100027226 3300005539 Bacteria 4802
65 Ga0070672_100022879 3300005543 Unclassified 4598
66 Ga0070696_100017728 3300005546 Bacteria 4808
67 Ga0070693_100008907 3300005547 Unclassified 4978
68 Ga0070704_100001584 3300005549 Bacteria 12287
69 Ga0070704_100018225 3300005549 Bacteria 4483
70 Ga0070664_100001677 3300005564 Bacteria 17745
71 Ga0068857_100006374 3300005577 Bacteria 10108
72 Ga0070702_100014618 3300005615 Unclassified 3986
73 Ga0068859_100005638 3300005617 Bacteria 12762
74 Ga0068859_100021355 3300005617 Bacteria 6496
75 Ga0068859_100037472 3300005617 Unclassified 4866
76 Ga0068859_100043642 3300005617 Bacteria 4507
77 Ga0068864_100004594 3300005618 Bacteria 11326
78 Ga0068864_100014419 3300005618 Bacteria 6564
79 Ga0068864_100037484 3300005618 Bacteria 4137
80 Ga0068861_100011556 3300005719 Bacteria 6143
81 Ga0068861_100017584 3300005719 Bacteria 5079
82 Ga0068863_100017361 3300005841 Bacteria 6899
83 Ga0068858_100000055 3300005842 Bacteria 118619
84 Ga0068858_100061712 3300005842 Bacteria 3466
85 Ga0068860_100003407 3300005843 Bacteria 16343
86 Ga0068860_100021040 3300005843 Bacteria 6320
87 Ga0068860_100046929 3300005843 Unclassified 4117
88 Ga0068862_100007308 3300005844 Bacteria 9169
89 Ga0068862_100035065 3300005844 Bacteria 4247
90 Ga0081539_10000156 3300005985 Bacteria 158871
91 Ga0081539_10000476 3300005985 Bacteria 84955
92 Ga0081539_10001446 3300005985 Bacteria 40634
93 Ga0081539_10001626 3300005985 Bacteria 36835
94 Ga0070715_10000035 3300006163 Bacteria 78855
95 Ga0070716_100000011 3300006173 Bacteria 143884
96 Ga0097621_100020349 3300006237 Bacteria 5112
97 Ga0075433_10011225 3300006852 Bacteria 7210
98 Ga0075434_100033680 3300006871 Bacteria 5057
99 Ga0068865_100009291 3300006881 Bacteria 6091
100 Ga0075436_100000040 3300006914 Bacteria 81162
101 Ga0075436_100001628 3300006914 Bacteria 15372
102 Ga0097620_100005638 3300006931 Bacteria 12762
103 Ga0097620_100021357 3300006931 Bacteria 6496
104 Ga0097620_100037472 3300006931 Unclassified 4866
105 Ga0097620_100043642 3300006931 Bacteria 4507
106 Ga0075435_100001431 3300007076 Bacteria 15356
107 Ga0099794_10006538 3300007265 Bacteria 4730
108 Ga0111539_10000227 3300009094 Bacteria 67567
109 Ga0111539_10007271 3300009094 Bacteria 14177
110 Ga0111539_10011993 3300009094 Bacteria 10866
111 Ga0105245_10020886 3300009098 Bacteria 5740
112 Ga0105247_10000001 3300009101 Bacteria 739726
113 Ga0105247_10002410 3300009101 Bacteria 12715
114 Ga0114129_10002599 3300009147 Bacteria 25103
115 Ga0114129_10004840 3300009147 Bacteria 19014
116 Ga0114129_10006354 3300009147 Bacteria 16753
117 Ga0114129_10017737 3300009147 Bacteria 10136
118 Ga0114129_10057713 3300009147 Bacteria 5431
119 Ga0114129_10094150 3300009147 Bacteria 4149
120 Ga0105243_10000503 3300009148 Bacteria 39965
121 Ga0105243_10000725 3300009148 Bacteria 31590
122 Ga0105243_10006964 3300009148 Bacteria 8704
123 Ga0105242_10003694 3300009176 Bacteria 11913
124 Ga0105242_10010993 3300009176 Bacteria 6953
125 Ga0105242_10011837 3300009176 Bacteria 6714
126 Ga0105248_10005655 3300009177 Bacteria 13732
127 Ga0105248_10016561 3300009177 Bacteria 8117
128 Ga0105248_10020932 3300009177 Bacteria 7249
129 Ga0105237_10002034 3300009545 Bacteria 25707
130 Ga0105237_10009952 3300009545 Bacteria 10145
131 Ga0105249_10000484 3300009553 Bacteria 36999
132 Ga0105249_10006583 3300009553 Bacteria 10108
133 Ga0105249_10097974 3300009553 Unclassified 2753
134 Ga0157373_10003543 3300013100 Bacteria 11791
135 Ga0157373_10005784 3300013100 Bacteria 9263
136 Ga0157378_10000015 3300013297 Bacteria 143601
137 Ga0157378_10003455 3300013297 Bacteria 14018
138 Ga0157378_10009450 3300013297 Bacteria 8499
139 Ga0157378_10017328 3300013297 Bacteria 6319
140 Ga0157378_10025298 3300013297 Bacteria 5228
141 Ga0157378_10081419 3300013297 Unclassified 2926
142 Ga0163162_10000047 3300013306 Bacteria 123541
143 Ga0163162_10003809 3300013306 Bacteria 14465
144 Ga0163162_10050624 3300013306 Unclassified 4165
145 Ga0163162_10103388 3300013306 Bacteria 2943
146 Ga0157372_10061349 3300013307 Unclassified 4210
147 Ga0163163_10001143 3300014325 Bacteria 22584
148 Ga0163163_10002341 3300014325 Bacteria 16030
149 Ga0163163_10004240 3300014325 Bacteria 12219
150 Ga0157380_10001895 3300014326 Bacteria 13871
151 Ga0157380_10005187 3300014326 Bacteria 9105
152 Ga0157380_10006099 3300014326 Bacteria 8447
153 Ga0157380_10015953 3300014326 Bacteria 5529
154 Ga0163161_10012789 3300017792 Bacteria 5830
155 Ga0213876_10000159 3300021384 Bacteria 70556
156 Ga0213876_10002337 3300021384 Bacteria 11182
157 Ga0207672_1000074 3300025223 Bacteria 13256
158 Ga0207653_10000253 3300025885 Bacteria 34204
159 Ga0207710_10000003 3300025900 Bacteria 1071597
160 Ga0207685_10000019 3300025905 Bacteria 145568
161 Ga0207684_10000297 3300025910 Bacteria 71105
162 Ga0207684_10002048 3300025910 Bacteria 20747
163 Ga0207684_10011480 3300025910 Bacteria 7745
164 Ga0207684_10020885 3300025910 Bacteria 5594
165 Ga0207707_10000080 3300025912 Bacteria 96693
166 Ga0207707_10014827 3300025912 Bacteria 6788
167 Ga0207695_10034489 3300025913 Bacteria 5503
168 Ga0207671_10016043 3300025914 Bacteria 5838
169 Ga0207662_10010483 3300025918 Bacteria 5119
170 Ga0207652_10001473 3300025921 Bacteria 20844
171 Ga0207652_10019934 3300025921 Bacteria 5522
172 Ga0207646_10001340 3300025922 Bacteria 30583
173 Ga0207646_10040140 3300025922 Unclassified 4210
174 Ga0207646_10067654 3300025922 Bacteria 3189
175 Ga0207681_10000306 3300025923 Bacteria 36019
176 Ga0207681_10006079 3300025923 Bacteria 7404
177 Ga0207650_10000041 3300025925 Bacteria 197115
178 Ga0207650_10029917 3300025925 Unclassified 3919
179 Ga0207644_10001427 3300025931 Bacteria 15394
180 Ga0207644_10013834 3300025931 Bacteria 5390
181 Ga0207690_10005003 3300025932 Bacteria 7829
182 Ga0207706_10011576 3300025933 Bacteria 8032
183 Ga0207686_10000024 3300025934 Bacteria 171857
184 Ga0207686_10000753 3300025934 Bacteria 19965
185 Ga0207709_10000012 3300025935 Bacteria 552803
186 Ga0207709_10006609 3300025935 Bacteria 6507
187 Ga0207670_10000595 3300025936 Bacteria 19771
188 Ga0207670_10028103 3300025936 Bacteria 3565
189 Ga0207665_10000057 3300025939 Bacteria 73138
190 Ga0207691_10011275 3300025940 Bacteria 8575
191 Ga0207711_10017644 3300025941 Bacteria 5928
192 Ga0207711_10017875 3300025941 Bacteria 5891
193 Ga0207689_10002378 3300025942 Bacteria 17562
194 Ga0207689_10018089 3300025942 Bacteria 5951
195 Ga0207689_10045610 3300025942 Unclassified 3624
196 Ga0207679_10010507 3300025945 Bacteria 5964
197 Ga0207651_10001718 3300025960 Bacteria 10115
198 Ga0207651_10029161 3300025960 Unclassified 3493
199 Ga0207712_10003313 3300025961 Bacteria 10205
200 Ga0207712_10003787 3300025961 Bacteria 9548
201 Ga0207703_10000118 3300026035 Bacteria 95317
202 Ga0207639_10011655 3300026041 Bacteria 6110
203 Ga0207639_10037614 3300026041 Unclassified 3595
204 Ga0207708_10000188 3300026075 Bacteria 48769
205 Ga0207648_10028713 3300026089 Unclassified 4931
206 Ga0207676_10013613 3300026095 Bacteria 5839
207 Ga0207674_10000212 3300026116 Bacteria 71941
208 Ga0207674_10052810 3300026116 Unclassified 4144
209 Ga0207674_10054445 3300026116 Bacteria 4073
210 Ga0207675_100003349 3300026118 Bacteria 15674
211 Ga0207675_100011828 3300026118 Bacteria 8159
212 Ga0207675_100051746 3300026118 Unclassified 3833
213 Ga0207428_10002797 3300027907 Bacteria 17327
214 Ga0268264_10009915 3300028381 Bacteria 7886
215 Ga0268264_10040145 3300028381 Unclassified 3867
216 Ga0307513_10000792 3300031456 Bacteria 45967
217 Ga0373951_0002644 3300035091 Bacteria 4496
218 Ga0395900_0039228 3300037418 Unclassified 4880
219 Ga0395905_0002371 3300037471 Bacteria 20992
220 Ga0395901_0108050 3300038443 Unclassified 2921
221 Ga0436365_0067166 3300039437 Bacteria 157821
222 Ga0436365_0802972 3300039437 Bacteria 4543
223 Ga0436365_0915988 3300039437 Bacteria 51495
224 Ga0495663_0000068 3300046525 Bacteria 47393
225 Ga0495598_0000430 3300046537 Bacteria 7590
226 Ga0495621_0000355 3300046539 Bacteria 11151
227 Ga0496102_0064947 3300048905 Bacteria 3344
228 Ga0496103_0053584 3300048906 Bacteria 2500
229 Ga0501298_000607 3300049521 Bacteria 4897
230 Ga0501038_0001415 3300049574 Bacteria 21957
231 Ga0501225_0001271 3300049705 Bacteria 7820
232 Ga0501225_0008520 3300049705 Bacteria 2940
233 Ga0501283_000670 3300049779 Bacteria 4523
234 nmdc:mga05p37_117813_c1 3300050507 Bacteria 3263
235 nmdc:mga05p37_41685_c1 3300050507 Bacteria 5637
236 nmdc:mga05p37_62111_c1 3300050507 Unclassified 4598
237 nmdc:mga05p37_62996_c1 3300050507 Unclassified 4564
238 nmdc:mga09592_62694_c1 3300050508 Unclassified 3145
239 nmdc:mga0rr50_690_c2 3300050513 Bacteria 16407
240 nmdc:mga08x19_850_c1 3300050514 Bacteria 18151
241 nmdc:mga08x19_8_c1 3300050514 Bacteria 427794
242 nmdc:mga0a205_18101_c1 3300050515 Bacteria 6619
243 nmdc:mga0a205_30467_c1 3300050515 Bacteria 5165
244 Ga0530510_0056115 3300061734 Bacteria 2845
245 Ga0500616_0002679
246 JGI24748J21848_1000008
247 JGI24034J26672_10000002
248 JGI24751J29686_10000137
249 JGI25406J46586_10002897
250 Ga0065714_10064469
251 Ga0065704_10072426
252 Ga0065712_10000127
253 Ga0065715_10090628
254 Ga0065715_10102421
255 Ga0065707_10003181
256 Ga0070676_10021243
257 Ga0070690_100002455
258 Ga0070670_100004087
259 Ga0070670_100005843
260 Ga0070670_100072976
261 Ga0068869_100012749
262 Ga0068869_100023730
263 Ga0070666_10030433
264 Ga0070680_100012705
265 Ga0070682_100006506
266 Ga0070682_100014470
267 Ga0068868_100039850
268 Ga0070660_100010393
269 Ga0070689_100001418
270 Ga0070661_100004333
271 Ga0070692_10013990
272 Ga0070669_100003156
273 Ga0070669_100003681
274 Ga0070659_100002545
275 Ga0070703_10000329
276 Ga0070700_100000155
277 Ga0070700_100019231
278 Ga0070694_100001782
279 Ga0070694_100003337
280 Ga0070694_100017243
281 Ga0070694_100024819
282 Ga0070708_100000123
283 Ga0070662_100016255
284 Ga0070681_10001930
285 Ga0070681_10012645
286 Ga0070681_10022413
287 Ga0068867_100003147
288 Ga0070706_100000068
289 Ga0070706_100008396
290 Ga0070706_100011966
291 Ga0070706_100013729
292 Ga0070707_100002790
293 Ga0070707_100010939
294 Ga0070707_100012170
295 Ga0070707_100043609
296 Ga0070698_100000671
297 Ga0070698_100002252
298 Ga0070698_100022600
299 Ga0070698_100023164
300 Ga0070698_100026737
301 Ga0070699_100001087
302 Ga0070679_100001494
303 Ga0070697_100000292
304 Ga0070697_100000395
305 Ga0070697_100008618
306 Ga0070697_100021712
307 Ga0068853_100010093
308 Ga0068853_100027226
309 Ga0070672_100022879
310 Ga0070696_100017728
311 Ga0070693_100008907
312 Ga0070704_100001584
313 Ga0070704_100018225
314 Ga0070664_100001677
315 Ga0068857_100006374
316 Ga0070702_100014618
317 Ga0068859_100005638
318 Ga0068859_100021355
319 Ga0068859_100037472
320 Ga0068859_100043642
321 Ga0068864_100004594
322 Ga0068864_100014419
323 Ga0068864_100037484
324 Ga0068861_100011556
325 Ga0068861_100017584
326 Ga0068863_100017361
327 Ga0068858_100000055
328 Ga0068858_100061712
329 Ga0068860_100003407
330 Ga0068860_100021040
331 Ga0068860_100046929
332 Ga0068862_100007308
333 Ga0068862_100035065
334 Ga0081539_10000156
335 Ga0081539_10000476
336 Ga0081539_10001446
337 Ga0081539_10001626
338 Ga0070715_10000035
339 Ga0070716_100000011
340 Ga0097621_100020349
341 Ga0075433_10011225
342 Ga0075434_100033680
343 Ga0068865_100009291
344 Ga0075436_100000040
345 Ga0075436_100001628
346 Ga0097620_100005638
347 Ga0097620_100021357
348 Ga0097620_100037472
349 Ga0097620_100043642
350 Ga0075435_100001431
351 Ga0099794_10006538
352 Ga0111539_10000227
353 Ga0111539_10007271
354 Ga0111539_10011993
355 Ga0105245_10020886
356 Ga0105247_10000001
357 Ga0105247_10002410
358 Ga0114129_10002599
359 Ga0114129_10004840
360 Ga0114129_10006354
361 Ga0114129_10017737
362 Ga0114129_10057713
363 Ga0114129_10094150
364 Ga0105243_10000503
365 Ga0105243_10000725
366 Ga0105243_10006964
367 Ga0105242_10003694
368 Ga0105242_10010993
369 Ga0105242_10011837
370 Ga0105248_10005655
371 Ga0105248_10016561
372 Ga0105248_10020932
373 Ga0105237_10002034
374 Ga0105237_10009952
375 Ga0105249_10000484
376 Ga0105249_10006583
377 Ga0105249_10097974
378 Ga0157373_10003543
379 Ga0157373_10005784
380 Ga0157378_10000015
381 Ga0157378_10003455
382 Ga0157378_10009450
383 Ga0157378_10017328
384 Ga0157378_10025298
385 Ga0157378_10081419
386 Ga0163162_10000047
387 Ga0163162_10003809
388 Ga0163162_10050624
389 Ga0163162_10103388
390 Ga0157372_10061349
391 Ga0163163_10001143
392 Ga0163163_10002341
393 Ga0163163_10004240
394 Ga0157380_10001895
395 Ga0157380_10005187
396 Ga0157380_10006099
397 Ga0157380_10015953
398 Ga0163161_10012789
399 Ga0213876_10000159
400 Ga0213876_10002337
401 Ga0207672_1000074
402 Ga0207653_10000253
403 Ga0207710_10000003
404 Ga0207685_10000019
405 Ga0207684_10000297
406 Ga0207684_10002048
407 Ga0207684_10011480
408 Ga0207684_10020885
409 Ga0207707_10000080
410 Ga0207707_10014827
411 Ga0207695_10034489
412 Ga0207671_10016043
413 Ga0207662_10010483
414 Ga0207652_10001473
415 Ga0207652_10019934
416 Ga0207646_10001340
417 Ga0207646_10040140
418 Ga0207646_10067654
419 Ga0207681_10000306
420 Ga0207681_10006079
421 Ga0207650_10000041
422 Ga0207650_10029917
423 Ga0207644_10001427
424 Ga0207644_10013834
425 Ga0207690_10005003
426 Ga0207706_10011576
427 Ga0207686_10000024
428 Ga0207686_10000753
429 Ga0207709_10000012
430 Ga0207709_10006609
431 Ga0207670_10000595
432 Ga0207670_10028103
433 Ga0207665_10000057
434 Ga0207691_10011275
435 Ga0207711_10017644
436 Ga0207711_10017875
437 Ga0207689_10002378
438 Ga0207689_10018089
439 Ga0207689_10045610
440 Ga0207679_10010507
441 Ga0207651_10001718
442 Ga0207651_10029161
443 Ga0207712_10003313
444 Ga0207712_10003787
445 Ga0207703_10000118
446 Ga0207639_10011655
447 Ga0207639_10037614
448 Ga0207708_10000188
449 Ga0207648_10028713
450 Ga0207676_10013613
451 Ga0207674_10000212
452 Ga0207674_10052810
453 Ga0207674_10054445
454 Ga0207675_100003349
455 Ga0207675_100011828
456 Ga0207675_100051746
457 Ga0207428_10002797
458 Ga0268264_10009915
459 Ga0268264_10040145
460 Ga0307513_10000792
461 Ga0373951_0002644
462 Ga0395900_0039228
463 Ga0395905_0002371
464 Ga0395901_0108050
465 Ga0436365_0067166
466 Ga0436365_0802972
467 Ga0436365_0915988
468 Ga0495663_0000068
469 Ga0495598_0000430
470 Ga0495621_0000355
471 Ga0496102_0064947
472 Ga0496103_0053584
473 Ga0501298_000607
474 Ga0501038_0001415
475 Ga0501225_0001271
476 Ga0501225_0008520
477 Ga0501283_000670
478 nmdc:mga05p37_117813_c1
479 nmdc:mga05p37_41685_c1
480 nmdc:mga05p37_62111_c1
481 nmdc:mga05p37_62996_c1
482 nmdc:mga09592_62694_c1
483 nmdc:mga0rr50_690_c2
484 nmdc:mga08x19_850_c1
485 nmdc:mga08x19_8_c1
486 nmdc:mga0a205_18101_c1
487 nmdc:mga0a205_30467_c1
488 Ga0530510_0056115

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00912

Transgly

Transglycosylase

207

394

0.93

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

491

745

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4oon-assembly1.cif.gz_A crystal structure of pbp1a in complex with compound 17 ((4z,8s,11e,14s)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2h-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid) 0.8516 404 785
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.849 200 388
3nb7-assembly1.cif.gz_A-2 crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with decarboxylated neryl moenomycin 0.8362 200 388
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.8355 200 388
2oqo-assembly1.cif.gz_A-2 crystal structure of a peptidoglycan glycosyltransferase from a class a pbp: insight into bacterial cell wall synthesis 0.8293 198 388
ID Description Score Start End Superfamily
af_P02918_397_833_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.87 459 790 3.40.710.10
5u2gB01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8656 404 789 3.40.710.10
4oonA02 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8606 434 785 3.40.710.10
5hldA03 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8532 405 785 3.40.710.10
4oonA02 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8531 434 785 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A2U3LEW5-F1-model_v4 Penicillin-binding protein, 1A family (EC 2.4.1.129) 0.9102 409 790 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0030288
GO:0071555
AF-A0A658JH02-F1-model_v4 deleted 0.8948 486 672
AF-A0A7W0J196-F1-model_v4 Penicillin-binding protein 0.8853 465 798 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0030288
GO:0071555
AF-A0A382Y4B9-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.8842 483 742 GO:0008658
GO:0008955
GO:0009252
GO:0030288
AF-A0A350JE00-F1-model_v4 deleted 0.8731 186 789

Map