F356616

General Info

Members Datasets Scaffolds Average Seq Length
244 186 488 277

Family's Representative Sequence

Representative Sequence 3300028379|Ga0268266_10121409|Ga0268266_101214092
Length 270
Sequence MKVVLFCGGQGLRMRGASGDDLPKPMVPLGTRPILWHLMKYYAHWGHKDFILCLGYKGTTIKEFFVHYQDWISNDFVVTDGGRKIELFQPDMADWRITLLDTGSDATIAERLLAVRPYLRDEPVFLANYSDGLTDCPLPEITDRLERTGAVATFLVVRPNISLHFVQHAPDGLVTNVMTSEQADAWVNGGFFALRQEIFDYILPGDELVEAPFQRLVAARKLAALPYTGFWRCCDTFKDLQTLESLLRRGAAPWEVWRTAARPPTAAMVA

Samples

Sample ID Description Type Environment
1 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
4 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
5 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
6 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
7 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
76 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
77 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
107 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
108 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
109 3300030889 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
112 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
113 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
114 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
115 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
116 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
117 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
118 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
119 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
120 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
121 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
122 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
123 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
124 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
125 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
130 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
131 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
132 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
136 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
141 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
142 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
143 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
144 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
145 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
158 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
159 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
162 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
163 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
164 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
165 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
166 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
180 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
181 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
182 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
183 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
184 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
185 2818991467 Bosea vestrisii 3192 Isolate Unclassified
186 2917699015 Bosea sp. F3-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.72
Metatranscriptomes 2.46
Isolates 0.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.1
Nodule 0
Rhizoplane 2.87
Rhizosphere 88.93
Stem 0
Stem Tuber 0
Unclassified 13.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0268266_10121409 3300028379 Unclassified 2326
2 MRS1b_contig_4472188 2162886011 Bacteria 1353
3 Ga0055524_1000011 3300003775 Bacteria 261442
4 Ga0055534_1006129 3300003784 Bacteria 3087
5 JGI25405J52794_10010023 3300003911 Bacteria 1798
6 Ga0058861_11525704 3300004800 Unclassified 911
7 Ga0058862_11312244 3300004803 Unclassified 1107
8 Ga0065712_10081860 3300005290 Bacteria 2969
9 Ga0065707_10108449 3300005295 Bacteria 2510
10 Ga0065707_10159687 3300005295 Bacteria 1575
11 Ga0070676_10059441 3300005328 Bacteria 2267
12 Ga0070670_100067796 3300005331 Bacteria 3061
13 Ga0068869_100012376 3300005334 Bacteria 5638
14 Ga0068868_100703266 3300005338 Bacteria 904
15 Ga0070689_100020885 3300005340 Bacteria 4867
16 Ga0070689_100205835 3300005340 Bacteria 1609
17 Ga0070692_10144609 3300005345 Bacteria 1349
18 Ga0070668_100022086 3300005347 Bacteria 4810
19 Ga0070668_100294976 3300005347 Unclassified 1358
20 Ga0070669_100009863 3300005353 Bacteria 6802
21 Ga0070669_100025751 3300005353 Bacteria 4226
22 Ga0070675_100032574 3300005354 Bacteria 4219
23 Ga0070675_100059548 3300005354 Bacteria 3150
24 Ga0070675_100395347 3300005354 Bacteria 1232
25 Ga0070673_100010766 3300005364 Bacteria 6208
26 Ga0070673_100076056 3300005364 Unclassified 2710
27 Ga0070673_100640928 3300005364 Bacteria 972
28 Ga0070688_100002786 3300005365 Bacteria 8878
29 Ga0070714_100037807 3300005435 Bacteria 4057
30 Ga0070714_100058474 3300005435 Bacteria 3303
31 Ga0070711_100098260 3300005439 Bacteria 2125
32 Ga0070705_100001182 3300005440 Bacteria 14252
33 Ga0070708_100024568 3300005445 Bacteria 5143
34 Ga0070662_100019663 3300005457 Bacteria 4588
35 Ga0070681_10031216 3300005458 Bacteria 5347
36 Ga0068867_100091665 3300005459 Bacteria 2307
37 Ga0070707_100077085 3300005468 Bacteria 3216
38 Ga0070707_100447840 3300005468 Unclassified 1252
39 Ga0070698_100087475 3300005471 Bacteria 3102
40 Ga0070698_100104870 3300005471 Bacteria 2797
41 Ga0070699_100014449 3300005518 Bacteria 6789
42 Ga0070679_100001165 3300005530 Bacteria 23040
43 Ga0070679_100438363 3300005530 Unclassified 1251
44 Ga0070679_100528710 3300005530 Unclassified 1123
45 Ga0070697_100067720 3300005536 Bacteria 2921
46 Ga0070672_100008669 3300005543 Bacteria 6971
47 Ga0070695_100003839 3300005545 Bacteria 8768
48 Ga0070695_100047696 3300005545 Unclassified 2737
49 Ga0070693_100040096 3300005547 Bacteria 2628
50 Ga0070665_100072528 3300005548 Unclassified 3450
51 Ga0070665_100226550 3300005548 Bacteria 1869
52 Ga0068855_100034581 3300005563 Bacteria 6024
53 Ga0068857_100083914 3300005577 Bacteria 2846
54 Ga0070702_100007959 3300005615 Bacteria 5107
55 Ga0068859_100026654 3300005617 Bacteria 5796
56 Ga0068859_100061793 3300005617 Bacteria 3775
57 Ga0068861_100012886 3300005719 Bacteria 5838
58 Ga0068870_10017323 3300005840 Bacteria 3459
59 Ga0081455_10003101 3300005937 Bacteria 19344
60 Ga0081455_10008686 3300005937 Bacteria 10522
61 Ga0081455_10039074 3300005937 Bacteria 4197
62 Ga0081455_10070838 3300005937 Unclassified 2893
63 Ga0070717_10119890 3300006028 Bacteria 2253
64 Ga0075363_100035684 3300006048 Bacteria 2604
65 Ga0070712_100027454 3300006175 Bacteria 3802
66 Ga0075369_10018953 3300006186 Bacteria 2806
67 Ga0097621_100062352 3300006237 Bacteria 3061
68 Ga0097621_100650574 3300006237 Bacteria 967
69 Ga0068871_100007409 3300006358 Bacteria 7837
70 Ga0075428_100030822 3300006844 Bacteria 5929
71 Ga0075428_100687671 3300006844 Unclassified 1090
72 Ga0075430_100107689 3300006846 Bacteria 2325
73 Ga0075430_100141837 3300006846 Bacteria 2001
74 Ga0075430_100451616 3300006846 Unclassified 1061
75 Ga0075431_100077291 3300006847 Bacteria 3436
76 Ga0075431_100474728 3300006847 Unclassified 1244
77 Ga0075433_10010647 3300006852 Bacteria 7394
78 Ga0075429_100161718 3300006880 Bacteria 1961
79 Ga0097620_100026655 3300006931 Bacteria 5796
80 Ga0097620_100061792 3300006931 Bacteria 3775
81 Ga0097620_100109230 3300006931 Bacteria 2827
82 Ga0105251_10066849 3300009011 Bacteria 1680
83 Ga0111539_10015034 3300009094 Bacteria 9646
84 Ga0111539_10371557 3300009094 Bacteria 1664
85 Ga0105245_10002123 3300009098 Bacteria 17958
86 Ga0114129_10055539 3300009147 Bacteria 5549
87 Ga0105241_10487488 3300009174 Unclassified 1097
88 Ga0105242_10396925 3300009176 Bacteria 1286
89 Ga0105237_10747812 3300009545 Unclassified 984
90 Ga0105249_10152525 3300009553 Bacteria 2226
91 Ga0105249_10452993 3300009553 Bacteria 1322
92 Ga0105239_10013455 3300010375 Bacteria 9089
93 Ga0171462_1011 3300013250 Bacteria 229282
94 Ga0157378_10000946 3300013297 Bacteria 26663
95 Ga0157378_10046362 3300013297 Unclassified 3864
96 Ga0157378_10106763 3300013297 Bacteria 2562
97 Ga0157378_10217084 3300013297 Bacteria 1816
98 Ga0163162_10267100 3300013306 Bacteria 1842
99 Ga0163162_10309661 3300013306 Bacteria 1711
100 Ga0157375_10002523 3300013308 Bacteria 15891
101 Ga0163163_10206867 3300014325 Bacteria 2011
102 Ga0163163_10278784 3300014325 Bacteria 1723
103 Ga0157380_10000255 3300014326 Bacteria 31852
104 Ga0157380_10059468 3300014326 Bacteria 3050
105 Ga0157377_10001466 3300014745 Bacteria 10209
106 Ga0157379_10076800 3300014968 Bacteria 2991
107 Ga0206356_10959764 3300020070 Unclassified 1578
108 Ga0206352_10551140 3300020078 Bacteria 1714
109 Ga0213872_10002845 3300021361 Bacteria 9886
110 Ga0213875_10001697 3300021388 Bacteria 13865
111 Ga0209675_1000957 3300025291 Bacteria 18303
112 Ga0209676_1009177 3300025292 Bacteria 4302
113 Ga0209564_1000143 3300025295 Bacteria 177136
114 Ga0209256_1000111 3300025299 Bacteria 178442
115 Ga0207645_10068216 3300025907 Bacteria 2274
116 Ga0207643_10008018 3300025908 Bacteria 5667
117 Ga0207707_10004100 3300025912 Bacteria 12909
118 Ga0207695_10058131 3300025913 Bacteria 4015
119 Ga0207693_10011168 3300025915 Bacteria 7272
120 Ga0207663_10230476 3300025916 Bacteria 1353
121 Ga0207660_10026675 3300025917 Bacteria 3935
122 Ga0207660_10145036 3300025917 Unclassified 1819
123 Ga0207652_10011849 3300025921 Bacteria 7034
124 Ga0207652_10386036 3300025921 Unclassified 1264
125 Ga0207652_10469909 3300025921 Unclassified 1133
126 Ga0207646_10077784 3300025922 Unclassified 2964
127 Ga0207646_10098327 3300025922 Bacteria 2623
128 Ga0207681_10072723 3300025923 Bacteria 2402
129 Ga0207681_10130906 3300025923 Bacteria 1855
130 Ga0207650_10166877 3300025925 Bacteria 1747
131 Ga0207659_10029567 3300025926 Bacteria 3736
132 Ga0207659_10098993 3300025926 Bacteria 2194
133 Ga0207659_10345411 3300025926 Bacteria 1233
134 Ga0207700_10000006 3300025928 Bacteria 348187
135 Ga0207700_10007846 3300025928 Bacteria 6563
136 Ga0207664_10429313 3300025929 Bacteria 1178
137 Ga0207706_10087920 3300025933 Unclassified 2733
138 Ga0207686_10288003 3300025934 Bacteria 1215
139 Ga0207670_10013136 3300025936 Bacteria 4874
140 Ga0207691_10020964 3300025940 Bacteria 6177
141 Ga0207711_10580883 3300025941 Bacteria 1045
142 Ga0207667_10058812 3300025949 Bacteria 4029
143 Ga0207651_10015513 3300025960 Bacteria 4430
144 Ga0207712_10387738 3300025961 Bacteria 1171
145 Ga0207668_10008963 3300025972 Bacteria 5984
146 Ga0207648_10120447 3300026089 Bacteria 2307
147 Ga0207675_100000282 3300026118 Bacteria 48883
148 Ga0207428_10032995 3300027907 Bacteria 4256
149 Ga0268266_10114622 3300028379 Unclassified 2392
150 Ga0265319_1004419 3300028563 Bacteria 6960
151 Ga0265318_10001006 3300028577 Bacteria 18018
152 Ga0265761_100032 3300030889 Bacteria 4332
153 Ga0265760_10052715 3300031090 Bacteria 1227
154 Ga0265330_10002824 3300031235 Bacteria 9299
155 Ga0265332_10013475 3300031238 Bacteria 3623
156 Ga0265320_10000218 3300031240 Bacteria 46495
157 Ga0265325_10005753 3300031241 Bacteria 7612
158 Ga0265329_10000485 3300031242 Bacteria 20653
159 Ga0265340_10001203 3300031247 Bacteria 14795
160 Ga0265339_10008789 3300031249 Bacteria 6398
161 Ga0265339_10010087 3300031249 Bacteria 5886
162 Ga0265331_10001063 3300031250 Bacteria 21390
163 Ga0265316_10010366 3300031344 Bacteria 8499
164 Ga0265313_10001858 3300031595 Bacteria 19223
165 Ga0265313_10008740 3300031595 Bacteria 6687
166 Ga0265342_10000161 3300031712 Bacteria 75750
167 Ga0265342_10002794 3300031712 Bacteria 14771
168 Ga0307516_10227779 3300031730 Bacteria 1569
169 Ga0373941_0004012 3300035115 Bacteria 3373
170 Ga0373931_0050908 3300035691 Bacteria 2205
171 Ga0373931_0174868 3300035691 Bacteria 1268
172 Ga0373947_0085420 3300035725 Unclassified 1960
173 Ga0373937_0024763 3300036401 Bacteria 5417
174 Ga0436364_1271543 3300037853 Bacteria 981
175 Ga0436365_0677256 3300039437 Bacteria 2551
176 Ga0436361_0048153 3300039447 Bacteria 35068
177 Ga0436363_0996793 3300039450 Bacteria 2991
178 Ga0439466_0045833 3300041411 Bacteria 1445
179 Ga0439434_0047038 3300042435 Bacteria 1332
180 Ga0451576_0017077 3300045051 Bacteria 7986
181 Ga0495580_0036468 3300046472 Bacteria 3530
182 Ga0495604_0220556 3300047317 Bacteria 1306
183 Ga0496107_0591847 3300048910 Unclassified 820
184 Ga0496110_0015335 3300048913 Bacteria 6375
185 Ga0496110_0216899 3300048913 Bacteria 1740
186 Ga0496111_0056272 3300048914 Bacteria 2845
187 Ga0496111_0199610 3300048914 Bacteria 1487
188 Ga0496112_0004756 3300048915 Bacteria 11579
189 Ga0496114_0059407 3300048917 Bacteria 3194
190 Ga0496122_0194483 3300048925 Bacteria 1193
191 Ga0496123_0122763 3300048926 Bacteria 1456
192 Ga0496125_0086073 3300048928 Bacteria 2379
193 Ga0496126_0012949 3300048929 Bacteria 8517
194 Ga0501032_0004094 3300049569 Bacteria 11049
195 Ga0501033_0003616 3300049570 Bacteria 12609
196 Ga0501034_0028728 3300049571 Bacteria 5658
197 Ga0501036_0000908 3300049572 Bacteria 22186
198 Ga0501037_0014276 3300049573 Bacteria 5853
199 Ga0501039_0004417 3300049575 Bacteria 10614
200 Ga0501040_0296574 3300049576 Bacteria 1155
201 Ga0501042_0010534 3300049578 Bacteria 6205
202 Ga0501043_0038619 3300049579 Unclassified 3753
203 Ga0501046_0004067 3300049580 Bacteria 13341
204 Ga0501047_0013191 3300049581 Bacteria 7826
205 Ga0501048_0072796 3300049582 Bacteria 2426
206 Ga0501067_0002632 3300049583 Bacteria 9937
207 Ga0501068_0000491 3300049584 Bacteria 20048
208 Ga0501069_0001666 3300049585 Bacteria 11051
209 Ga0501070_0042263 3300049586 Unclassified 3796
210 Ga0501072_0001477 3300049588 Bacteria 17625
211 Ga0501072_0022209 3300049588 Bacteria 4923
212 Ga0501073_0022938 3300049589 Unclassified 4488
213 Ga0501074_0003463 3300049590 Bacteria 11198
214 Ga0501074_0401408 3300049590 Bacteria 972
215 Ga0501075_0006511 3300049591 Bacteria 8041
216 Ga0501076_0014627 3300049592 Bacteria 5916
217 Ga0501077_0080864 3300049593 Unclassified 2058
218 Ga0501077_0198856 3300049593 Bacteria 1273
219 Ga0501079_0000655 3300049741 Bacteria 23110
220 Ga0501079_0090403 3300049741 Bacteria 2372
221 Ga0501080_0000166 3300049742 Bacteria 47741
222 Ga0501083_0078334 3300049744 Unclassified 2192
223 Ga0501035_0006144 3300049822 Bacteria 11304
224 Ga0501035_0347068 3300049822 Bacteria 1243
225 Ga0501044_0033755 3300049823 Bacteria 5373
226 nmdc:mga0yw44_191185_c1 3300050492 Unclassified 1350
227 nmdc:mga05p37_27788_c1 3300050507 Bacteria 6891
228 nmdc:mga05p37_83262_c1 3300050507 Bacteria 3941
229 nmdc:mga09592_138643_c1 3300050508 Bacteria 2096
230 nmdc:mga09592_347333_c1 3300050508 Unclassified 1284
231 nmdc:mga06r32_36456_c1 3300050510 Bacteria 4647
232 nmdc:mga08y16_384839_c1 3300050511 Bacteria 1437
233 nmdc:mga0n895_33665_c1 3300050512 Bacteria 4926
234 nmdc:mga0a205_276822_c1 3300050515 Bacteria 1554
235 nmdc:mga0a205_5255_c1 3300050515 Bacteria 11656
236 nmdc:mga0sz30_2943_c1 3300050516 Bacteria 2777
237 Ga0495595_0173494 3300053084 Bacteria 1068
238 Ga0495619_0207477 3300053085 Bacteria 1357
239 Ga0501084_0000632 3300054114 Bacteria 26843
240 Ga0501082_0007237 3300060353 Bacteria 9569
241 Ga0501082_0056142 3300060353 Bacteria 3392
242 Ga0530510_0005790 3300061734 Bacteria 8567
243 2819719153 2818991467 Bacteria 5893227
244 2917700685 2917699015 Bacteria 7043791
245 Ga0268266_10121409
246 MRS1b_contig_4472188
247 Ga0055524_1000011
248 Ga0055534_1006129
249 JGI25405J52794_10010023
250 Ga0058861_11525704
251 Ga0058862_11312244
252 Ga0065712_10081860
253 Ga0065707_10108449
254 Ga0065707_10159687
255 Ga0070676_10059441
256 Ga0070670_100067796
257 Ga0068869_100012376
258 Ga0068868_100703266
259 Ga0070689_100020885
260 Ga0070689_100205835
261 Ga0070692_10144609
262 Ga0070668_100022086
263 Ga0070668_100294976
264 Ga0070669_100009863
265 Ga0070669_100025751
266 Ga0070675_100032574
267 Ga0070675_100059548
268 Ga0070675_100395347
269 Ga0070673_100010766
270 Ga0070673_100076056
271 Ga0070673_100640928
272 Ga0070688_100002786
273 Ga0070714_100037807
274 Ga0070714_100058474
275 Ga0070711_100098260
276 Ga0070705_100001182
277 Ga0070708_100024568
278 Ga0070662_100019663
279 Ga0070681_10031216
280 Ga0068867_100091665
281 Ga0070707_100077085
282 Ga0070707_100447840
283 Ga0070698_100087475
284 Ga0070698_100104870
285 Ga0070699_100014449
286 Ga0070679_100001165
287 Ga0070679_100438363
288 Ga0070679_100528710
289 Ga0070697_100067720
290 Ga0070672_100008669
291 Ga0070695_100003839
292 Ga0070695_100047696
293 Ga0070693_100040096
294 Ga0070665_100072528
295 Ga0070665_100226550
296 Ga0068855_100034581
297 Ga0068857_100083914
298 Ga0070702_100007959
299 Ga0068859_100026654
300 Ga0068859_100061793
301 Ga0068861_100012886
302 Ga0068870_10017323
303 Ga0081455_10003101
304 Ga0081455_10008686
305 Ga0081455_10039074
306 Ga0081455_10070838
307 Ga0070717_10119890
308 Ga0075363_100035684
309 Ga0070712_100027454
310 Ga0075369_10018953
311 Ga0097621_100062352
312 Ga0097621_100650574
313 Ga0068871_100007409
314 Ga0075428_100030822
315 Ga0075428_100687671
316 Ga0075430_100107689
317 Ga0075430_100141837
318 Ga0075430_100451616
319 Ga0075431_100077291
320 Ga0075431_100474728
321 Ga0075433_10010647
322 Ga0075429_100161718
323 Ga0097620_100026655
324 Ga0097620_100061792
325 Ga0097620_100109230
326 Ga0105251_10066849
327 Ga0111539_10015034
328 Ga0111539_10371557
329 Ga0105245_10002123
330 Ga0114129_10055539
331 Ga0105241_10487488
332 Ga0105242_10396925
333 Ga0105237_10747812
334 Ga0105249_10152525
335 Ga0105249_10452993
336 Ga0105239_10013455
337 Ga0171462_1011
338 Ga0157378_10000946
339 Ga0157378_10046362
340 Ga0157378_10106763
341 Ga0157378_10217084
342 Ga0163162_10267100
343 Ga0163162_10309661
344 Ga0157375_10002523
345 Ga0163163_10206867
346 Ga0163163_10278784
347 Ga0157380_10000255
348 Ga0157380_10059468
349 Ga0157377_10001466
350 Ga0157379_10076800
351 Ga0206356_10959764
352 Ga0206352_10551140
353 Ga0213872_10002845
354 Ga0213875_10001697
355 Ga0209675_1000957
356 Ga0209676_1009177
357 Ga0209564_1000143
358 Ga0209256_1000111
359 Ga0207645_10068216
360 Ga0207643_10008018
361 Ga0207707_10004100
362 Ga0207695_10058131
363 Ga0207693_10011168
364 Ga0207663_10230476
365 Ga0207660_10026675
366 Ga0207660_10145036
367 Ga0207652_10011849
368 Ga0207652_10386036
369 Ga0207652_10469909
370 Ga0207646_10077784
371 Ga0207646_10098327
372 Ga0207681_10072723
373 Ga0207681_10130906
374 Ga0207650_10166877
375 Ga0207659_10029567
376 Ga0207659_10098993
377 Ga0207659_10345411
378 Ga0207700_10000006
379 Ga0207700_10007846
380 Ga0207664_10429313
381 Ga0207706_10087920
382 Ga0207686_10288003
383 Ga0207670_10013136
384 Ga0207691_10020964
385 Ga0207711_10580883
386 Ga0207667_10058812
387 Ga0207651_10015513
388 Ga0207712_10387738
389 Ga0207668_10008963
390 Ga0207648_10120447
391 Ga0207675_100000282
392 Ga0207428_10032995
393 Ga0268266_10114622
394 Ga0265319_1004419
395 Ga0265318_10001006
396 Ga0265761_100032
397 Ga0265760_10052715
398 Ga0265330_10002824
399 Ga0265332_10013475
400 Ga0265320_10000218
401 Ga0265325_10005753
402 Ga0265329_10000485
403 Ga0265340_10001203
404 Ga0265339_10008789
405 Ga0265339_10010087
406 Ga0265331_10001063
407 Ga0265316_10010366
408 Ga0265313_10001858
409 Ga0265313_10008740
410 Ga0265342_10000161
411 Ga0265342_10002794
412 Ga0307516_10227779
413 Ga0373941_0004012
414 Ga0373931_0050908
415 Ga0373931_0174868
416 Ga0373947_0085420
417 Ga0373937_0024763
418 Ga0436364_1271543
419 Ga0436365_0677256
420 Ga0436361_0048153
421 Ga0436363_0996793
422 Ga0439466_0045833
423 Ga0439434_0047038
424 Ga0451576_0017077
425 Ga0495580_0036468
426 Ga0495604_0220556
427 Ga0496107_0591847
428 Ga0496110_0015335
429 Ga0496110_0216899
430 Ga0496111_0056272
431 Ga0496111_0199610
432 Ga0496112_0004756
433 Ga0496114_0059407
434 Ga0496122_0194483
435 Ga0496123_0122763
436 Ga0496125_0086073
437 Ga0496126_0012949
438 Ga0501032_0004094
439 Ga0501033_0003616
440 Ga0501034_0028728
441 Ga0501036_0000908
442 Ga0501037_0014276
443 Ga0501039_0004417
444 Ga0501040_0296574
445 Ga0501042_0010534
446 Ga0501043_0038619
447 Ga0501046_0004067
448 Ga0501047_0013191
449 Ga0501048_0072796
450 Ga0501067_0002632
451 Ga0501068_0000491
452 Ga0501069_0001666
453 Ga0501070_0042263
454 Ga0501072_0001477
455 Ga0501072_0022209
456 Ga0501073_0022938
457 Ga0501074_0003463
458 Ga0501074_0401408
459 Ga0501075_0006511
460 Ga0501076_0014627
461 Ga0501077_0080864
462 Ga0501077_0198856
463 Ga0501079_0000655
464 Ga0501079_0090403
465 Ga0501080_0000166
466 Ga0501083_0078334
467 Ga0501035_0006144
468 Ga0501035_0347068
469 Ga0501044_0033755
470 nmdc:mga0yw44_191185_c1
471 nmdc:mga05p37_27788_c1
472 nmdc:mga05p37_83262_c1
473 nmdc:mga09592_138643_c1
474 nmdc:mga09592_347333_c1
475 nmdc:mga06r32_36456_c1
476 nmdc:mga08y16_384839_c1
477 nmdc:mga0n895_33665_c1
478 nmdc:mga0a205_276822_c1
479 nmdc:mga0a205_5255_c1
480 nmdc:mga0sz30_2943_c1
481 Ga0495595_0173494
482 Ga0495619_0207477
483 Ga0501084_0000632
484 Ga0501082_0007237
485 Ga0501082_0056142
486 Ga0530510_0005790
487 2819719153
488 2917700685

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wvc-assembly1.cif.gz_A alpha-d-glucose-1-phosphate cytidylyltransferase complexed with ctp 0.8506 2 256
1tzf-assembly1.cif.gz_A x-ray crystal structure of alpha-d-glucose-1-phosphate cytidylyltransferase from salmonella typhi 0.8404 2 256
1wvc-assembly1.cif.gz_A alpha-d-glucose-1-phosphate cytidylyltransferase complexed with ctp 0.8379 2 256
4y7v-assembly1.cif.gz_A structural analysis of muru 0.8314 1 247
1tzf-assembly1.cif.gz_A x-ray crystal structure of alpha-d-glucose-1-phosphate cytidylyltransferase from salmonella typhi 0.8255 2 256
ID Description Score Start End Superfamily
1tzfA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8404 2 256 3.90.550.10
af_K7LRM0_18_167_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.84 106 233 3.90.550.10
4y7vA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8314 1 247 3.90.550.10
1tzfA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8255 2 256 3.90.550.10
4y7vA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8242 1 247 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A2V5QWW3-F1-model_v4 Glucose-1-phosphate cytidylyltransferase 0.9676 1 244 GO:0009058
GO:0047343
AF-A0A2V5YUL8-F1-model_v4 Glucose-1-phosphate cytidylyltransferase 0.9648 41 259 GO:0047343
AF-A0A2V5QWW3-F1-model_v4 Glucose-1-phosphate cytidylyltransferase 0.9638 1 244 GO:0009058
GO:0047343
AF-A0A1Q7ZZV2-F1-model_v4 Glucose-1-phosphate cytidylyltransferase 0.9575 26 257 GO:0047343
AF-A0A3B8ZAJ3-F1-model_v4 Glucose-1-phosphate cytidylyltransferase 0.9574 1 262 GO:0009058
GO:0047343

Map