F356355

General Info

Members Datasets Scaffolds Average Seq Length
244 182 488 436

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10050689|Ga0081538_100506892
Length 503
Sequence MVQRCCTPQVDMGEHWYRCIPPAVVTSPLTCVGRGSVGSGVDAPPPREQGSEARVARHPDGAPRLSHTEGSMMKRVLAIILGGGAGTRLYPLTKLRAKPAVPLGAKYRLIDIPISNCINSEIQRIYVLTQFNSASLNRHIARTYALAGVGFSQGFVEVLAAQQTPESPSWFEGTADAVRKYLRLFAEWDVDQYLILAGDHLYRMNYAEFIHRHRETKADITIGVVPVDASRASDFGLLRIDPQGRVRSFSEKPTGEALHAMRVDTTVLGLHAAQAPAAPYMASMGIYVFEKQVLHALLTQAPAHTDFGKDILPLATREYNVQAYLFPDYWEDIGTIDAFYHANLALTSQPDPPFSFYDEQAPIYTRSRYLPPTKLLDATVIESMLGEGCILKECTVKRSVIGIRSRLETGCVIDQALLMGADYYESPPERLEHMEQGTVPLGVGAHTTIHKAIVDKNARIGRHVRIVNKDHVQEANQEDLGFVIRNGIVVVIKNATLPDGLVI

Samples

Sample ID Description Type Environment
1 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300023559 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
62 3300023561 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
63 3300023562 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
64 3300023564 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI4 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
65 3300023664 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
66 3300023666 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
67 3300023682 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
68 3300023684 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRE2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
69 3300023688 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRE1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
70 3300023689 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
71 3300023690 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
72 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
102 3300031591 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
103 3300031614 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRI4 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
104 3300031615 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
105 3300031632 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRI2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
106 3300031635 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
107 3300031666 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRI6 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
108 3300031690 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRI1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
109 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
110 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
111 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
112 3300031810 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Unclassified
113 3300031815 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Unclassified
114 3300031816 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Unclassified
115 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
116 3300031828 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Unclassified
117 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
120 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
121 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
122 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
123 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
124 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
125 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
128 3300036242 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRI5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300036458 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
131 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
132 3300036534 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
133 3300036535 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU6 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
134 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
135 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
136 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
137 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
138 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
139 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
140 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
141 3300041450 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaT Metatranscriptome Rhizoplane
142 3300041497 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaT Metatranscriptome Unclassified
143 3300041907 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaT_extra_run Metatranscriptome Unclassified
144 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
145 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
146 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
147 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
148 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
149 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
159 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
160 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
161 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
162 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
163 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
164 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
165 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
178 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
180 2831426010 Nostoc sp. 106C Isolate Unclassified
181 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
182 2849660919 Nostoc sp. T09 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 85.66
Metatranscriptomes 13.11
Isolates 1.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.64
Rhizosphere 82.38
Stem 0
Stem Tuber 0
Unclassified 10.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081538_10050689 3300005981 Unclassified 2503
2 LJQas_1000296 3300000549 Bacteria 8858
3 JGI25405J52794_10015150 3300003911 Unclassified 1512
4 Ga0065712_10002620 3300005290 Bacteria 5379
5 Ga0065715_10001419 3300005293 Bacteria 7574
6 Ga0070658_10012593 3300005327 Bacteria 6785
7 Ga0070670_100008027 3300005331 Bacteria 8980
8 Ga0068869_100047923 3300005334 Bacteria 3088
9 Ga0070666_10006130 3300005335 Bacteria 7390
10 Ga0070689_100057506 3300005340 Bacteria 3019
11 Ga0070691_10058683 3300005341 Bacteria 1848
12 Ga0070661_100011964 3300005344 Bacteria 6062
13 Ga0070668_100085017 3300005347 Bacteria 2486
14 Ga0070675_100030328 3300005354 Bacteria 4366
15 Ga0070671_100051413 3300005355 Bacteria 3427
16 Ga0070674_100011471 3300005356 Bacteria 5397
17 Ga0070700_100052376 3300005441 Unclassified 2545
18 Ga0070708_100026155 3300005445 Unclassified 4992
19 Ga0070708_100032349 3300005445 Unclassified 4536
20 Ga0070678_100041088 3300005456 Bacteria 3276
21 Ga0070662_100154565 3300005457 Bacteria 1789
22 Ga0070681_10096145 3300005458 Bacteria 2910
23 Ga0070681_10185535 3300005458 Bacteria 2000
24 Ga0070679_100053900 3300005530 Bacteria 4003
25 Ga0070697_100010932 3300005536 Bacteria 7090
26 Ga0070697_100134749 3300005536 Bacteria 2073
27 Ga0068853_100024652 3300005539 Bacteria 5045
28 Ga0068853_100216698 3300005539 Bacteria 1747
29 Ga0070686_100003146 3300005544 Bacteria 9038
30 Ga0070693_100074044 3300005547 Bacteria 2013
31 Ga0070704_100040220 3300005549 Bacteria 3217
32 Ga0070704_100043545 3300005549 Bacteria 3112
33 Ga0068855_100043500 3300005563 Bacteria 5320
34 Ga0068855_100198566 3300005563 Bacteria 2259
35 Ga0070664_100035800 3300005564 Bacteria 4168
36 Ga0068859_100000004 3300005617 Bacteria 470249
37 Ga0068864_100158119 3300005618 Bacteria 2058
38 Ga0068864_100180317 3300005618 Unclassified 1931
39 Ga0068861_100164836 3300005719 Bacteria 1831
40 Ga0068860_100070473 3300005843 Bacteria 3324
41 Ga0068860_100214755 3300005843 Bacteria 1866
42 Ga0081455_10003911 3300005937 Bacteria 16956
43 Ga0081455_10015675 3300005937 Bacteria 7350
44 Ga0081540_1017669 3300005983 Unclassified 4406
45 Ga0081540_1024474 3300005983 Bacteria 3503
46 Ga0081539_10006657 3300005985 Bacteria 10949
47 Ga0070717_10127491 3300006028 Bacteria 2186
48 Ga0075428_100014113 3300006844 Bacteria 8890
49 Ga0075428_100036108 3300006844 Bacteria 5446
50 Ga0075430_100113921 3300006846 Bacteria 2254
51 Ga0075430_100195406 3300006846 Unclassified 1681
52 Ga0075431_100022146 3300006847 Bacteria 6497
53 Ga0075431_100074339 3300006847 Unclassified 3507
54 Ga0075431_100272357 3300006847 Bacteria 1715
55 Ga0075433_10007171 3300006852 Bacteria 8829
56 Ga0075433_10039252 3300006852 Bacteria 4092
57 Ga0075429_100039753 3300006880 Unclassified 4094
58 Ga0097620_100000004 3300006931 Bacteria 470249
59 Ga0111539_10035130 3300009094 Bacteria 6069
60 Ga0111539_10068659 3300009094 Bacteria 4185
61 Ga0111539_10115054 3300009094 Unclassified 3155
62 Ga0111539_10234253 3300009094 Bacteria 2138
63 Ga0105245_10078467 3300009098 Unclassified 3013
64 Ga0105247_10075676 3300009101 Unclassified 2113
65 Ga0114129_10113216 3300009147 Bacteria 3741
66 Ga0114129_10260855 3300009147 Bacteria 2323
67 Ga0114129_10393816 3300009147 Bacteria 1827
68 Ga0105242_10093998 3300009176 Bacteria 2528
69 Ga0105248_10095722 3300009177 Bacteria 3343
70 Ga0105237_10073810 3300009545 Bacteria 3403
71 Ga0105249_10000029 3300009553 Bacteria 227479
72 Ga0105239_10178266 3300010375 Bacteria 2377
73 Ga0105246_10013051 3300011119 Bacteria 5199
74 Ga0157371_10180937 3300013102 Bacteria 1508
75 Ga0157378_10037570 3300013297 Bacteria 4290
76 Ga0157378_10061309 3300013297 Bacteria 3356
77 Ga0163162_10000009 3300013306 Bacteria 316099
78 Ga0163162_10017813 3300013306 Bacteria 6951
79 Ga0163163_10030258 3300014325 Bacteria 5215
80 Ga0157379_10017886 3300014968 Bacteria 6245
81 Ga0163161_10034540 3300017792 Bacteria 3618
82 Ga0213876_10000169 3300021384 Bacteria 68458
83 Ga0213876_10000434 3300021384 Bacteria 34208
84 Ga0247529_101196 3300023559 Eukaryota 2232
85 Ga0247518_102250 3300023561 Eukaryota 2155
86 Ga0247516_102498 3300023562 Eukaryota 2034
87 Ga0247515_102181 3300023564 Eukaryota 2098
88 Ga0247527_101049 3300023664 Eukaryota 2082
89 Ga0247531_101205 3300023666 Eukaryota 2178
90 Ga0247513_101610 3300023682 Eukaryota 2131
91 Ga0247523_101779 3300023684 Eukaryota 2043
92 Ga0247522_101768 3300023688 Eukaryota 2081
93 Ga0247517_101463 3300023689 Eukaryota 2275
94 Ga0247512_102549 3300023690 Eukaryota 2039
95 Ga0207697_10003983 3300025315 Bacteria 7164
96 Ga0207647_10044653 3300025904 Bacteria 2767
97 Ga0207645_10004447 3300025907 Bacteria 10378
98 Ga0207705_10031055 3300025909 Unclassified 3812
99 Ga0207657_10001822 3300025919 Bacteria 22989
100 Ga0207652_10043005 3300025921 Bacteria 3847
101 Ga0207681_10174871 3300025923 Bacteria 1630
102 Ga0207650_10005493 3300025925 Bacteria 8653
103 Ga0207650_10012197 3300025925 Bacteria 5928
104 Ga0207659_10020440 3300025926 Bacteria 4377
105 Ga0207659_10167595 3300025926 Bacteria 1730
106 Ga0207687_10091829 3300025927 Bacteria 2215
107 Ga0207706_10201600 3300025933 Unclassified 1745
108 Ga0207669_10231970 3300025937 Bacteria 1362
109 Ga0207704_10021350 3300025938 Bacteria 3446
110 Ga0207691_10018227 3300025940 Bacteria 6650
111 Ga0207679_10064571 3300025945 Bacteria 2736
112 Ga0207667_10062282 3300025949 Bacteria 3901
113 Ga0207667_10121086 3300025949 Bacteria 2696
114 Ga0207712_10000128 3300025961 Bacteria 79324
115 Ga0207677_10026847 3300026023 Unclassified 3617
116 Ga0207703_10169446 3300026035 Bacteria 1919
117 Ga0207639_10057674 3300026041 Bacteria 2983
118 Ga0207639_10082105 3300026041 Bacteria 2554
119 Ga0207702_10169715 3300026078 Bacteria 1999
120 Ga0207648_10113666 3300026089 Bacteria 2378
121 Ga0207674_10186780 3300026116 Unclassified 2023
122 Ga0207675_100138914 3300026118 Bacteria 2307
123 Ga0207683_10009619 3300026121 Bacteria 8237
124 Ga0207683_10175907 3300026121 Unclassified 1940
125 Ga0209971_1017327 3300027682 Bacteria 1708
126 Ga0209974_10004951 3300027876 Bacteria 4712
127 Ga0209974_10006899 3300027876 Bacteria 3937
128 Ga0207428_10082168 3300027907 Bacteria 2514
129 Ga0268266_10223294 3300028379 Bacteria 1733
130 Ga0265322_10000068 3300028654 Bacteria 49602
131 Ga0310116_102587 3300031591 Eukaryota 1821
132 Ga0310103_101798 3300031614 Eukaryota 2461
133 Ga0310107_102971 3300031615 Eukaryota 2106
134 Ga0310102_100441 3300031632 Eukaryota 2061
135 Ga0310115_102417 3300031635 Eukaryota 2158
136 Ga0310105_101663 3300031666 Eukaryota 2326
137 Ga0310101_102060 3300031690 Eukaryota 2254
138 Ga0316579_10003770 3300031691 Bacteria 5967
139 Ga0316579_10073685 3300031691 Unclassified 1620
140 Ga0316578_10077196 3300031728 Bacteria 1978
141 Ga0316578_10089626 3300031728 Bacteria 1836
142 Ga0316577_10007846 3300031733 Bacteria 5699
143 Ga0316577_10113307 3300031733 Bacteria 1522
144 Ga0316044_102526 3300031810 Eukaryota 2184
145 Ga0316045_101930 3300031815 Eukaryota 2363
146 Ga0316042_103415 3300031816 Eukaryota 2220
147 Ga0307413_10007156 3300031824 Bacteria 5157
148 Ga0316043_102917 3300031828 Eukaryota 2338
149 Ga0307412_10089915 3300031911 Bacteria 2145
150 Ga0307416_100005174 3300032002 Bacteria 7972
151 Ga0307416_100028968 3300032002 Bacteria 4128
152 Ga0307416_100062820 3300032002 Bacteria 3038
153 Ga0307411_10006806 3300032005 Bacteria 5756
154 Ga0307411_10040995 3300032005 Bacteria 2942
155 Ga0307415_100032904 3300032126 Bacteria 3359
156 Ga0316583_10002211 3300032133 Bacteria 6704
157 Ga0316593_10001668 3300032168 Bacteria 4999
158 Ga0373923_0016537 3300035111 Bacteria 2805
159 Ga0316574_0000340 3300035398 Bacteria 18046
160 Ga0316574_0005132 3300035398 Bacteria 6964
161 Ga0316574_0041603 3300035398 Bacteria 2833
162 Ga0373931_0016950 3300035691 Bacteria 3594
163 Ga0373935_0141881 3300035692 Bacteria 1623
164 Ga0373947_0012770 3300035725 Bacteria 4814
165 Ga0310104_01330 3300036242 Eukaryota 1955
166 Ga0373937_0247346 3300036401 Unclassified 1681
167 Ga0310112_003498 3300036458 Eukaryota 2069
168 Ga0372808_003320 3300036459 Eukaryota 1961
169 Ga0310109_003076 3300036534 Eukaryota 1954
170 Ga0310110_004351 3300036535 Eukaryota 1980
171 Ga0316582_0000559 3300036647 Bacteria 14295
172 Ga0316582_0011217 3300036647 Bacteria 4945
173 Ga0316582_0026906 3300036647 Bacteria 3467
174 Ga0316584_0004134 3300036712 Bacteria 9576
175 Ga0373925_0081104 3300037068 Bacteria 2466
176 Ga0316581_0010625 3300037588 Bacteria 2558
177 Ga0400483_005734 3300039062 Bacteria 2081
178 Ga0400489_52411 3300039093 Bacteria 4582
179 Ga0436365_1207177 3300039437 Bacteria 90363
180 Ga0436365_1237576 3300039437 Bacteria 49735
181 Ga0451796_09133 3300041450 Eukaryota 1705
182 Ga0451840_18989 3300041497 Eukaryota 2042
183 Ga0452268_42631 3300041907 Eukaryota 2360
184 Ga0452268_52922 3300041907 Eukaryota 2030
185 Ga0451577_0151147 3300042876 Bacteria 2089
186 Ga0453683_0016088 3300044673 Bacteria 4833
187 Ga0453683_0057381 3300044673 Bacteria 2436
188 Ga0453684_0005872 3300044712 Bacteria 23852
189 Ga0453684_0050374 3300044712 Bacteria 5479
190 Ga0451576_0001224 3300045051 Bacteria 45523
191 Ga0451576_0004816 3300045051 Bacteria 17288
192 Ga0451576_0018153 3300045051 Bacteria 7717
193 Ga0495582_0054320 3300046473 Unclassified 2209
194 Ga0495598_0001680 3300046537 Bacteria 4434
195 Ga0496112_0052603 3300048915 Bacteria 3997
196 Ga0496112_0254243 3300048915 Bacteria 1707
197 Ga0496113_0229187 3300048916 Bacteria 1481
198 Ga0501038_0009654 3300049574 Bacteria 8852
199 Ga0501039_0021857 3300049575 Bacteria 4909
200 Ga0501040_0010872 3300049576 Bacteria 5950
201 Ga0501042_0002466 3300049578 Bacteria 11367
202 Ga0501048_0017564 3300049582 Bacteria 5269
203 Ga0501068_0023677 3300049584 Bacteria 3601
204 Ga0501071_0004159 3300049587 Bacteria 9156
205 Ga0501072_0010659 3300049588 Bacteria 7000
206 Ga0501072_0047770 3300049588 Unclassified 3371
207 Ga0501074_0047713 3300049590 Bacteria 3095
208 Ga0501075_0002494 3300049591 Bacteria 12268
209 Ga0501075_0026737 3300049591 Bacteria 4250
210 Ga0501076_0041286 3300049592 Bacteria 3629
211 Ga0501076_0048864 3300049592 Bacteria 3343
212 Ga0501077_0035756 3300049593 Bacteria 3162
213 Ga0501233_008281 3300049668 Bacteria 1999
214 Ga0501079_0003502 3300049741 Bacteria 11539
215 Ga0501079_0020697 3300049741 Bacteria 5030
216 Ga0501080_0111073 3300049742 Bacteria 2541
217 Ga0501081_0007134 3300049743 Bacteria 7262
218 Ga0501035_0064981 3300049822 Bacteria 3242
219 Ga0501045_0010143 3300049824 Bacteria 6592
220 nmdc:mga05p37_192350_c1 3300050507 Bacteria 2476
221 nmdc:mga05p37_30831_c1 3300050507 Bacteria 6545
222 nmdc:mga05p37_45879_c1 3300050507 Bacteria 5375
223 nmdc:mga05p37_56208_c1 3300050507 Bacteria 4845
224 nmdc:mga05p37_89267_c1 3300050507 Bacteria 3799
225 nmdc:mga0qj67_103821_c1 3300050509 Bacteria 2293
226 nmdc:mga0qj67_253666_c1 3300050509 Unclassified 1427
227 nmdc:mga06r32_139660_c1 3300050510 Bacteria 2398
228 nmdc:mga06r32_7685_c1 3300050510 Bacteria 9699
229 nmdc:mga06r32_94271_c1 3300050510 Unclassified 2929
230 nmdc:mga08y16_172333_c1 3300050511 Bacteria 2248
231 nmdc:mga08y16_265092_c1 3300050511 Bacteria 1774
232 nmdc:mga08y16_352669_c1 3300050511 Unclassified 1511
233 nmdc:mga0n895_61345_c1 3300050512 Bacteria 3712
234 nmdc:mga0rr50_8142_c1 3300050513 Bacteria 6506
235 nmdc:mga0a205_4338_c1 3300050515 Bacteria 12717
236 nmdc:mga0a205_6335_c1 3300050515 Bacteria 10686
237 Ga0501084_0005757 3300054114 Bacteria 10196
238 Ga0501084_0037925 3300054114 Bacteria 4028
239 Ga0590077_002414 3300059426 Bacteria 4009
240 Ga0501082_0006806 3300060353 Bacteria 9879
241 Ga0501082_0006875 3300060353 Bacteria 9840
242 2831432183 2831426010 Bacteria 8662725
243 2848702924 2848694841 Bacteria 9205737
244 2849665220 2849660919 Bacteria 8251853
245 Ga0081538_10050689
246 LJQas_1000296
247 JGI25405J52794_10015150
248 Ga0065712_10002620
249 Ga0065715_10001419
250 Ga0070658_10012593
251 Ga0070670_100008027
252 Ga0068869_100047923
253 Ga0070666_10006130
254 Ga0070689_100057506
255 Ga0070691_10058683
256 Ga0070661_100011964
257 Ga0070668_100085017
258 Ga0070675_100030328
259 Ga0070671_100051413
260 Ga0070674_100011471
261 Ga0070700_100052376
262 Ga0070708_100026155
263 Ga0070708_100032349
264 Ga0070678_100041088
265 Ga0070662_100154565
266 Ga0070681_10096145
267 Ga0070681_10185535
268 Ga0070679_100053900
269 Ga0070697_100010932
270 Ga0070697_100134749
271 Ga0068853_100024652
272 Ga0068853_100216698
273 Ga0070686_100003146
274 Ga0070693_100074044
275 Ga0070704_100040220
276 Ga0070704_100043545
277 Ga0068855_100043500
278 Ga0068855_100198566
279 Ga0070664_100035800
280 Ga0068859_100000004
281 Ga0068864_100158119
282 Ga0068864_100180317
283 Ga0068861_100164836
284 Ga0068860_100070473
285 Ga0068860_100214755
286 Ga0081455_10003911
287 Ga0081455_10015675
288 Ga0081540_1017669
289 Ga0081540_1024474
290 Ga0081539_10006657
291 Ga0070717_10127491
292 Ga0075428_100014113
293 Ga0075428_100036108
294 Ga0075430_100113921
295 Ga0075430_100195406
296 Ga0075431_100022146
297 Ga0075431_100074339
298 Ga0075431_100272357
299 Ga0075433_10007171
300 Ga0075433_10039252
301 Ga0075429_100039753
302 Ga0097620_100000004
303 Ga0111539_10035130
304 Ga0111539_10068659
305 Ga0111539_10115054
306 Ga0111539_10234253
307 Ga0105245_10078467
308 Ga0105247_10075676
309 Ga0114129_10113216
310 Ga0114129_10260855
311 Ga0114129_10393816
312 Ga0105242_10093998
313 Ga0105248_10095722
314 Ga0105237_10073810
315 Ga0105249_10000029
316 Ga0105239_10178266
317 Ga0105246_10013051
318 Ga0157371_10180937
319 Ga0157378_10037570
320 Ga0157378_10061309
321 Ga0163162_10000009
322 Ga0163162_10017813
323 Ga0163163_10030258
324 Ga0157379_10017886
325 Ga0163161_10034540
326 Ga0213876_10000169
327 Ga0213876_10000434
328 Ga0247529_101196
329 Ga0247518_102250
330 Ga0247516_102498
331 Ga0247515_102181
332 Ga0247527_101049
333 Ga0247531_101205
334 Ga0247513_101610
335 Ga0247523_101779
336 Ga0247522_101768
337 Ga0247517_101463
338 Ga0247512_102549
339 Ga0207697_10003983
340 Ga0207647_10044653
341 Ga0207645_10004447
342 Ga0207705_10031055
343 Ga0207657_10001822
344 Ga0207652_10043005
345 Ga0207681_10174871
346 Ga0207650_10005493
347 Ga0207650_10012197
348 Ga0207659_10020440
349 Ga0207659_10167595
350 Ga0207687_10091829
351 Ga0207706_10201600
352 Ga0207669_10231970
353 Ga0207704_10021350
354 Ga0207691_10018227
355 Ga0207679_10064571
356 Ga0207667_10062282
357 Ga0207667_10121086
358 Ga0207712_10000128
359 Ga0207677_10026847
360 Ga0207703_10169446
361 Ga0207639_10057674
362 Ga0207639_10082105
363 Ga0207702_10169715
364 Ga0207648_10113666
365 Ga0207674_10186780
366 Ga0207675_100138914
367 Ga0207683_10009619
368 Ga0207683_10175907
369 Ga0209971_1017327
370 Ga0209974_10004951
371 Ga0209974_10006899
372 Ga0207428_10082168
373 Ga0268266_10223294
374 Ga0265322_10000068
375 Ga0310116_102587
376 Ga0310103_101798
377 Ga0310107_102971
378 Ga0310102_100441
379 Ga0310115_102417
380 Ga0310105_101663
381 Ga0310101_102060
382 Ga0316579_10003770
383 Ga0316579_10073685
384 Ga0316578_10077196
385 Ga0316578_10089626
386 Ga0316577_10007846
387 Ga0316577_10113307
388 Ga0316044_102526
389 Ga0316045_101930
390 Ga0316042_103415
391 Ga0307413_10007156
392 Ga0316043_102917
393 Ga0307412_10089915
394 Ga0307416_100005174
395 Ga0307416_100028968
396 Ga0307416_100062820
397 Ga0307411_10006806
398 Ga0307411_10040995
399 Ga0307415_100032904
400 Ga0316583_10002211
401 Ga0316593_10001668
402 Ga0373923_0016537
403 Ga0316574_0000340
404 Ga0316574_0005132
405 Ga0316574_0041603
406 Ga0373931_0016950
407 Ga0373935_0141881
408 Ga0373947_0012770
409 Ga0310104_01330
410 Ga0373937_0247346
411 Ga0310112_003498
412 Ga0372808_003320
413 Ga0310109_003076
414 Ga0310110_004351
415 Ga0316582_0000559
416 Ga0316582_0011217
417 Ga0316582_0026906
418 Ga0316584_0004134
419 Ga0373925_0081104
420 Ga0316581_0010625
421 Ga0400483_005734
422 Ga0400489_52411
423 Ga0436365_1207177
424 Ga0436365_1237576
425 Ga0451796_09133
426 Ga0451840_18989
427 Ga0452268_42631
428 Ga0452268_52922
429 Ga0451577_0151147
430 Ga0453683_0016088
431 Ga0453683_0057381
432 Ga0453684_0005872
433 Ga0453684_0050374
434 Ga0451576_0001224
435 Ga0451576_0004816
436 Ga0451576_0018153
437 Ga0495582_0054320
438 Ga0495598_0001680
439 Ga0496112_0052603
440 Ga0496112_0254243
441 Ga0496113_0229187
442 Ga0501038_0009654
443 Ga0501039_0021857
444 Ga0501040_0010872
445 Ga0501042_0002466
446 Ga0501048_0017564
447 Ga0501068_0023677
448 Ga0501071_0004159
449 Ga0501072_0010659
450 Ga0501072_0047770
451 Ga0501074_0047713
452 Ga0501075_0002494
453 Ga0501075_0026737
454 Ga0501076_0041286
455 Ga0501076_0048864
456 Ga0501077_0035756
457 Ga0501233_008281
458 Ga0501079_0003502
459 Ga0501079_0020697
460 Ga0501080_0111073
461 Ga0501081_0007134
462 Ga0501035_0064981
463 Ga0501045_0010143
464 nmdc:mga05p37_192350_c1
465 nmdc:mga05p37_30831_c1
466 nmdc:mga05p37_45879_c1
467 nmdc:mga05p37_56208_c1
468 nmdc:mga05p37_89267_c1
469 nmdc:mga0qj67_103821_c1
470 nmdc:mga0qj67_253666_c1
471 nmdc:mga06r32_139660_c1
472 nmdc:mga06r32_7685_c1
473 nmdc:mga06r32_94271_c1
474 nmdc:mga08y16_172333_c1
475 nmdc:mga08y16_265092_c1
476 nmdc:mga08y16_352669_c1
477 nmdc:mga0n895_61345_c1
478 nmdc:mga0rr50_8142_c1
479 nmdc:mga0a205_4338_c1
480 nmdc:mga0a205_6335_c1
481 Ga0501084_0005757
482 Ga0501084_0037925
483 Ga0590077_002414
484 Ga0501082_0006806
485 Ga0501082_0006875
486 2831432183
487 2848702924
488 2849665220

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00483

NTP_transferase

Nucleotidyl transferase

77

349

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1yp2-assembly1.cif.gz_B crystal structure of potato tuber adp-glucose pyrophosphorylase 0.9511 5 431
1yp4-assembly1.cif.gz_A crystal structure of potato tuber adp-glucose pyrophosphorylase in complex with adp-glucose 0.9476 5 431
1yp4-assembly1.cif.gz_B crystal structure of potato tuber adp-glucose pyrophosphorylase in complex with adp-glucose 0.9468 5 431
1yp2-assembly1.cif.gz_A crystal structure of potato tuber adp-glucose pyrophosphorylase 0.9467 5 431
1yp2-assembly1.cif.gz_C crystal structure of potato tuber adp-glucose pyrophosphorylase 0.9462 5 431
ID Description Score Start End Superfamily
af_A0A1D6FPJ1_169_404_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9516 5 218 3.90.550.10
af_A0A1D6HWJ4_65_382_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9227 2 296 3.90.550.10
af_F4I8U2_340_476_2.160.10.10 Mainly Beta;3 Solenoid;UDP N-Acetylglucosamine Acyltransferase; domain 1;Hexapeptide repeat proteins 0.9182 297 431 2.160.10.10
af_F4I8U2_340_476_2.160.10.10 Mainly Beta;3 Solenoid;UDP N-Acetylglucosamine Acyltransferase; domain 1;Hexapeptide repeat proteins 0.8995 297 431 2.160.10.10
af_P55240_1_125_2.160.10.10 Mainly Beta;3 Solenoid;UDP N-Acetylglucosamine Acyltransferase; domain 1;Hexapeptide repeat proteins 0.8983 329 431 2.160.10.10
ID Description Score Start End GO Terms
AF-A0A2V8PGG1-F1-model_v4 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) 0.9702 96 431 GO:0005524
GO:0005978
GO:0008878
AF-K4EKL3-F1-model_v4 glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) 0.9636 5 431 GO:0005524
GO:0005978
GO:0008878
AF-A0A2G5EAE7-F1-model_v4 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) 0.9633 5 343 GO:0005524
GO:0005978
GO:0008878
GO:0009507
GO:0019252
AF-A0A7T9GG02-F1-model_v4 deleted 0.9626 6 431
AF-A0A2V8PGG1-F1-model_v4 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) 0.9618 96 431 GO:0005524
GO:0005978
GO:0008878

Map