F355928

General Info

Members Datasets Scaffolds Average Seq Length
243 177 486 461

Family's Representative Sequence

Representative Sequence 3300047471|Ga0495684_0008010|Ga0495684_0008010_1834_3429
Length 531
Sequence MSARSGACSVEVSGSVIDTSRDASLSAQPELLLGHPSKAAAARFSMARAWKMGHDHREKSSSRSEVGRFEEDSMSTSAIDELRTQIRGEVITPQDSSYEEARKVYNGMIDKHPAAVIRCNGSADVAAVIRVARTEGLDLSVRGGSHSAPGFGTNDGGLVIDLSPLQAVTVDPEAKTARAGGGCTWAVFNEATNAHGLATTGGIIGSTGIAGLTLGGGIGYLARKYGLSCDNLVSAEVVTADGQVLTASEQENDDLFWALRGGGGNFGVVTTFEFRLHPVADIYGGPIAYPVDRADDVLRFYREYISESPEELGGFVGFHLAPPLPFLPEEWHFKNVCLAVPCWAGPLEQGEKMIKPFLDAVEPIGSHVGPMPYPALNTAFDELLPAGLQAYWKASFARELSDGAIAVHADHGARVPAIQCAVHLYPIDGAVQRVGAADTAFAYRDVNFSPVIAGMWESPADNEQNIAWVRGYYEALEPYSAEGGYINFMDGDDQNRITANYRGNYDRLAAVKAQYDPTNLFHLNQNIQPAT

Samples

Sample ID Description Type Environment
1 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
82 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
83 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
85 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
86 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
87 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
89 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
98 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
99 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
102 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
105 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
106 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
107 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
108 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
109 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
117 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
146 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
160 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
161 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
162 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
166 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
167 2643221692 Nocardia sp. Root136 Isolate Unclassified
168 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
169 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
170 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
171 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
172 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
173 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
174 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
175 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
176 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
177 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.47
Metatranscriptomes 0
Isolates 4.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.06
Nodule 0
Rhizoplane 6.58
Rhizosphere 86.42
Stem 0
Stem Tuber 0
Unclassified 4.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495684_0008010 3300047471 Bacteria 8169
2 LJQas_1003155 3300000549 Bacteria 2224
3 JGI24740J21852_10017007 3300001979 Bacteria 2612
4 JGI24739J22299_10015618 3300001989 Bacteria 2759
5 JGI24738J21930_10003735 3300002075 Bacteria 3806
6 JGI25406J46586_10008777 3300003203 Unclassified 4554
7 rootH2_10257899 3300003320 Bacteria 2218
8 Ga0065714_10012380 3300005288 Bacteria 3212
9 Ga0070683_100011755 3300005329 Bacteria 7580
10 Ga0068868_100008153 3300005338 Bacteria 7497
11 Ga0070675_100014230 3300005354 Bacteria 6272
12 Ga0070709_10052353 3300005434 Bacteria 2565
13 Ga0070714_100017536 3300005435 Bacteria 5802
14 Ga0070713_100139865 3300005436 Bacteria 2143
15 Ga0070710_10046563 3300005437 Bacteria 2416
16 Ga0070700_100001884 3300005441 Bacteria 10598
17 Ga0070708_100002133 3300005445 Bacteria 15285
18 Ga0070708_100005316 3300005445 Bacteria 10209
19 Ga0070708_100046933 3300005445 Bacteria 3814
20 Ga0070708_100049259 3300005445 Bacteria 3726
21 Ga0070663_100180572 3300005455 Bacteria 1637
22 Ga0070662_100009427 3300005457 Bacteria 6380
23 Ga0070681_10059236 3300005458 Bacteria 3809
24 Ga0070706_100001705 3300005467 Bacteria 22868
25 Ga0070706_100031589 3300005467 Bacteria 4883
26 Ga0070706_100048466 3300005467 Bacteria 3921
27 Ga0070706_100060392 3300005467 Bacteria 3499
28 Ga0070706_100069944 3300005467 Bacteria 3246
29 Ga0070707_100003443 3300005468 Bacteria 14957
30 Ga0070707_100028158 3300005468 Bacteria 5345
31 Ga0070707_100032650 3300005468 Bacteria 4960
32 Ga0068853_100034446 3300005539 Bacteria 4298
33 Ga0070664_100000704 3300005564 Bacteria 25537
34 Ga0068857_100057641 3300005577 Bacteria 3448
35 Ga0068857_100088405 3300005577 Bacteria 2772
36 Ga0070702_100132297 3300005615 Bacteria 1577
37 Ga0081539_10000006 3300005985 Bacteria 534555
38 Ga0070717_10058676 3300006028 Bacteria 3182
39 Ga0070717_10210545 3300006028 Bacteria 1706
40 Ga0075432_10000099 3300006058 Bacteria 18409
41 Ga0070716_100030841 3300006173 Bacteria 2913
42 Ga0070712_100044289 3300006175 Bacteria 3068
43 Ga0075428_100040049 3300006844 Archaea 5156
44 Ga0075430_100018353 3300006846 Archaea 5954
45 Ga0075430_100101344 3300006846 Bacteria 2404
46 Ga0075433_10001181 3300006852 Bacteria 18990
47 Ga0075433_10007510 3300006852 Bacteria 8653
48 Ga0075434_100000582 3300006871 Bacteria 28164
49 Ga0075434_100035213 3300006871 Bacteria 4948
50 Ga0075436_100058549 3300006914 Bacteria 2661
51 Ga0075436_100071545 3300006914 Bacteria 2398
52 Ga0075435_100000099 3300007076 Bacteria 46122
53 Ga0105240_10013594 3300009093 Bacteria 11168
54 Ga0105240_10282373 3300009093 Unclassified 1907
55 Ga0111539_10006074 3300009094 Bacteria 15593
56 Ga0111539_10009106 3300009094 Bacteria 12566
57 Ga0105245_10001004 3300009098 Bacteria 25627
58 Ga0105245_10027016 3300009098 Bacteria 5055
59 Ga0114129_10388801 3300009147 Bacteria 1841
60 Ga0105243_10029104 3300009148 Bacteria 4246
61 Ga0105242_10059744 3300009176 Bacteria 3129
62 Ga0105239_10058190 3300010375 Bacteria 4241
63 Ga0105239_10238383 3300010375 Unclassified 2042
64 Ga0157369_10231481 3300013105 Unclassified 1932
65 Ga0157378_10058038 3300013297 Bacteria 3451
66 Ga0163162_10230783 3300013306 Unclassified 1981
67 Ga0157372_10149848 3300013307 Bacteria 2692
68 Ga0157372_10286708 3300013307 Bacteria 1915
69 Ga0157375_10047523 3300013308 Bacteria 4192
70 Ga0157375_10178931 3300013308 Bacteria 2272
71 Ga0157376_10211934 3300014969 Bacteria 1789
72 Ga0209129_1000079 3300025258 Bacteria 187308
73 Ga0209025_1002025 3300025294 Bacteria 23132
74 Ga0207655_1005661 3300025728 Bacteria 8451
75 Ga0207655_1026842 3300025728 Bacteria 2756
76 Ga0207684_10000799 3300025910 Bacteria 36374
77 Ga0207684_10027783 3300025910 Bacteria 4819
78 Ga0207684_10097920 3300025910 Bacteria 2504
79 Ga0207684_10171578 3300025910 Bacteria 1870
80 Ga0207707_10013623 3300025912 Bacteria 7090
81 Ga0207646_10006459 3300025922 Bacteria 12104
82 Ga0207646_10011868 3300025922 Bacteria 8403
83 Ga0207646_10027368 3300025922 Bacteria 5199
84 Ga0207646_10039694 3300025922 Archaea 4235
85 Ga0207646_10150848 3300025922 Bacteria 2096
86 Ga0207650_10113636 3300025925 Bacteria 2100
87 Ga0207659_10005734 3300025926 Bacteria 7560
88 Ga0207687_10124356 3300025927 Bacteria 1934
89 Ga0207700_10161991 3300025928 Bacteria 1858
90 Ga0207690_10043685 3300025932 Bacteria 2950
91 Ga0207706_10017468 3300025933 Bacteria 6465
92 Ga0207665_10058790 3300025939 Unclassified 2600
93 Ga0207661_10013859 3300025944 Bacteria 5892
94 Ga0207661_10090799 3300025944 Bacteria 2544
95 Ga0207658_10074091 3300025986 Unclassified 2586
96 Ga0207658_10082882 3300025986 Bacteria 2464
97 Ga0207677_10003368 3300026023 Bacteria 8455
98 Ga0207708_10021780 3300026075 Bacteria 4836
99 Ga0207674_10015576 3300026116 Bacteria 8350
100 Ga0207698_10078371 3300026142 Bacteria 2653
101 Ga0207428_10000696 3300027907 Bacteria 39096
102 Ga0207428_10059574 3300027907 Bacteria 3027
103 Ga0307408_100005508 3300031548 Bacteria 8458
104 Ga0307408_100123646 3300031548 Bacteria 2008
105 Ga0307405_10020688 3300031731 Bacteria 3681
106 Ga0307413_10002794 3300031824 Bacteria 7188
107 Ga0307410_10009043 3300031852 Bacteria 5563
108 Ga0307406_10014549 3300031901 Bacteria 4531
109 Ga0307407_10071196 3300031903 Bacteria 2069
110 Ga0307407_10072842 3300031903 Bacteria 2050
111 Ga0307409_100003538 3300031995 Bacteria 8519
112 Ga0307409_100200541 3300031995 Bacteria 1785
113 Ga0307416_100059147 3300032002 Bacteria 3112
114 Ga0307416_100198148 3300032002 Bacteria 1902
115 Ga0307414_10002688 3300032004 Bacteria 9347
116 Ga0307414_10029128 3300032004 Bacteria 3590
117 Ga0307411_10009774 3300032005 Bacteria 5068
118 Ga0307415_100030154 3300032126 Bacteria 3476
119 Ga0307415_100038575 3300032126 Bacteria 3150
120 Ga0316583_10000753 3300032133 Bacteria 10135
121 Ga0373923_0025866 3300035111 Unclassified 2330
122 Ga0373936_0000390 3300035113 Bacteria 14909
123 Ga0373957_0023573 3300035120 Unclassified 2203
124 Ga0373943_0000092 3300035170 Bacteria 33178
125 Ga0373935_0001269 3300035692 Bacteria 13918
126 Ga0373927_0000056 3300035695 Bacteria 81041
127 Ga0373947_0000369 3300035725 Bacteria 25404
128 Ga0373947_0051113 3300035725 Bacteria 2486
129 Ga0373937_0211074 3300036401 Bacteria 1827
130 Ga0373925_0003309 3300037068 Bacteria 12522
131 Ga0395899_0033583 3300037312 Bacteria 3852
132 Ga0395900_0008923 3300037418 Bacteria 10285
133 Ga0395900_0015977 3300037418 Bacteria 7649
134 Ga0395898_0013285 3300037466 Bacteria 8481
135 Ga0395898_0031657 3300037466 Bacteria 5283
136 Ga0395898_0049392 3300037466 Bacteria 4122
137 Ga0395898_0234482 3300037466 Bacteria 1750
138 Ga0395901_0003578 3300038443 Bacteria 15677
139 Ga0395901_0116013 3300038443 Bacteria 2813
140 Ga0436365_1718037 3300039437 Bacteria 2127
141 Ga0436361_0147964 3300039447 Bacteria 6359
142 Ga0436363_0214036 3300039450 Bacteria 21593
143 Ga0436363_1015572 3300039450 Bacteria 2379
144 Ga0466971_0013902 3300044719 Bacteria 3539
145 Ga0466967_0157361 3300045976 Unclassified 2130
146 Ga0495592_0022971 3300046454 Bacteria 4746
147 Ga0495653_0002574 3300046463 Bacteria 14455
148 Ga0495653_0053368 3300046463 Bacteria 3093
149 Ga0495585_0126340 3300046492 Bacteria 1349
150 Ga0495628_0013464 3300046516 Bacteria 6881
151 Ga0495628_0057599 3300046516 Bacteria 3057
152 Ga0495628_0080201 3300046516 Bacteria 2537
153 Ga0495630_0121829 3300046517 Bacteria 1979
154 Ga0495666_0027948 3300046526 Bacteria 2776
155 Ga0495587_0007261 3300046536 Bacteria 7185
156 Ga0495587_0067378 3300046536 Bacteria 2087
157 Ga0495656_0017736 3300046615 Bacteria 2721
158 Ga0495588_0021210 3300046674 Bacteria 3199
159 Ga0495658_0033964 3300046683 Bacteria 2797
160 Ga0495624_0073721 3300046690 Bacteria 2122
161 Ga0495670_0019643 3300046691 Bacteria 3329
162 Ga0495636_0009956 3300047318 Bacteria 3746
163 Ga0495674_0225235 3300047319 Bacteria 1549
164 Ga0495680_0066386 3300047322 Bacteria 2761
165 Ga0495675_0036133 3300047444 Bacteria 3152
166 Ga0495675_0053662 3300047444 Bacteria 2559
167 Ga0495681_0055365 3300047470 Bacteria 1850
168 Ga0496100_0002489 3300048903 Bacteria 9370
169 Ga0496101_0003572 3300048904 Bacteria 9702
170 Ga0496102_0030784 3300048905 Bacteria 4805
171 Ga0496102_0106724 3300048905 Bacteria 2607
172 Ga0496103_0090597 3300048906 Bacteria 1929
173 Ga0496105_0204516 3300048908 Bacteria 1611
174 Ga0496106_0016709 3300048909 Bacteria 5429
175 Ga0496106_0148066 3300048909 Bacteria 1851
176 Ga0496107_0099258 3300048910 Bacteria 2133
177 Ga0496108_0043522 3300048911 Bacteria 3750
178 Ga0496109_0086205 3300048912 Bacteria 2900
179 Ga0496111_0013591 3300048914 Bacteria 5543
180 Ga0496112_0056722 3300048915 Bacteria 3856
181 Ga0496115_0057672 3300048918 Bacteria 3124
182 Ga0496115_0060157 3300048918 Bacteria 3060
183 Ga0496115_0303537 3300048918 Bacteria 1308
184 Ga0496121_0013756 3300048924 Bacteria 8665
185 Ga0496126_0011694 3300048929 Bacteria 9051
186 Ga0501031_0128772 3300049568 Bacteria 1653
187 Ga0501032_0011806 3300049569 Bacteria 6259
188 Ga0501036_0074556 3300049572 Bacteria 2870
189 Ga0501038_0151326 3300049574 Bacteria 1891
190 Ga0501040_0001591 3300049576 Archaea 14466
191 Ga0501040_0068276 3300049576 Bacteria 2451
192 Ga0501041_0008848 3300049577 Bacteria 5925
193 Ga0501042_0054253 3300049578 Bacteria 2859
194 Ga0501042_0096941 3300049578 Bacteria 2119
195 Ga0501043_0005898 3300049579 Bacteria 9854
196 Ga0501046_0050221 3300049580 Bacteria 3296
197 Ga0501046_0197610 3300049580 Bacteria 1497
198 Ga0501070_0008518 3300049586 Bacteria 8668
199 Ga0501071_0019165 3300049587 Bacteria 4747
200 Ga0501071_0061702 3300049587 Bacteria 2715
201 Ga0501072_0027547 3300049588 Bacteria 4433
202 Ga0501073_0111133 3300049589 Bacteria 1901
203 Ga0501076_0018185 3300049592 Bacteria 5353
204 Ga0501077_0025668 3300049593 Bacteria 3740
205 Ga0501077_0060826 3300049593 Bacteria 2397
206 Ga0501077_0096108 3300049593 Bacteria 1878
207 Ga0501080_0081602 3300049742 Bacteria 3004
208 Ga0501081_0030067 3300049743 Bacteria 3675
209 Ga0501044_0078393 3300049823 Bacteria 3348
210 Ga0501045_0007789 3300049824 Bacteria 7450
211 Ga0501045_0045588 3300049824 Bacteria 3192
212 nmdc:mga05p37_58471_c1 3300050507 Unclassified 4748
213 nmdc:mga0qj67_41679_c1 3300050509 Archaea 3612
214 nmdc:mga06r32_56960_c1 3300050510 Unclassified 3753
215 nmdc:mga08y16_12086_c1 3300050511 Bacteria 9073
216 nmdc:mga08y16_234881_c1 3300050511 Bacteria 1896
217 nmdc:mga08y16_62994_c1 3300050511 Bacteria 3873
218 nmdc:mga0n895_172_c1 3300050512 Bacteria 40069
219 nmdc:mga0n895_23329_c1 3300050512 Bacteria 5814
220 nmdc:mga0rr50_362_c1 3300050513 Bacteria 24724
221 nmdc:mga08x19_17697_c1 3300050514 Bacteria 4364
222 nmdc:mga0a205_2477_c2 3300050515 Bacteria 11472
223 nmdc:mga0a205_6275_c1 3300050515 Bacteria 10731
224 Ga0500635_0001108 3300053080 Bacteria 6434
225 Ga0495619_0007992 3300053085 Bacteria 6695
226 Ga0500583_0010718 3300053092 Bacteria 3417
227 Ga0500616_0000011 3300053153 Bacteria 732880
228 Ga0501084_0011413 3300054114 Bacteria 7357
229 Ga0501082_0087669 3300060353 Bacteria 2685
230 Ga0466962_0028316 3300061719 Bacteria 2685
231 Ga0530510_0011696 3300061734 Bacteria 6159
232 Ga0530510_0020837 3300061734 Bacteria 4663
233 2644517405 2643221692 Bacteria 7282860
234 2739363695 2738543034 Bacteria 6084756
235 2808877855 2808606366 Bacteria 4415912
236 2808891068 2808606370 Bacteria 4942454
237 2816425319 2816332119 Bacteria 8120218
238 2904778634 2904776348 Bacteria 4658726
239 2919053148 2919051321 Bacteria 4210889
240 2919060713 2919059106 Bacteria 4991624
241 2919392788 2919391150 Bacteria 4884741
242 2939648026 2939647034 Bacteria 4681660
243 2974302913 2974302888 Bacteria 4369871
244 Ga0495684_0008010
245 LJQas_1003155
246 JGI24740J21852_10017007
247 JGI24739J22299_10015618
248 JGI24738J21930_10003735
249 JGI25406J46586_10008777
250 rootH2_10257899
251 Ga0065714_10012380
252 Ga0070683_100011755
253 Ga0068868_100008153
254 Ga0070675_100014230
255 Ga0070709_10052353
256 Ga0070714_100017536
257 Ga0070713_100139865
258 Ga0070710_10046563
259 Ga0070700_100001884
260 Ga0070708_100002133
261 Ga0070708_100005316
262 Ga0070708_100046933
263 Ga0070708_100049259
264 Ga0070663_100180572
265 Ga0070662_100009427
266 Ga0070681_10059236
267 Ga0070706_100001705
268 Ga0070706_100031589
269 Ga0070706_100048466
270 Ga0070706_100060392
271 Ga0070706_100069944
272 Ga0070707_100003443
273 Ga0070707_100028158
274 Ga0070707_100032650
275 Ga0068853_100034446
276 Ga0070664_100000704
277 Ga0068857_100057641
278 Ga0068857_100088405
279 Ga0070702_100132297
280 Ga0081539_10000006
281 Ga0070717_10058676
282 Ga0070717_10210545
283 Ga0075432_10000099
284 Ga0070716_100030841
285 Ga0070712_100044289
286 Ga0075428_100040049
287 Ga0075430_100018353
288 Ga0075430_100101344
289 Ga0075433_10001181
290 Ga0075433_10007510
291 Ga0075434_100000582
292 Ga0075434_100035213
293 Ga0075436_100058549
294 Ga0075436_100071545
295 Ga0075435_100000099
296 Ga0105240_10013594
297 Ga0105240_10282373
298 Ga0111539_10006074
299 Ga0111539_10009106
300 Ga0105245_10001004
301 Ga0105245_10027016
302 Ga0114129_10388801
303 Ga0105243_10029104
304 Ga0105242_10059744
305 Ga0105239_10058190
306 Ga0105239_10238383
307 Ga0157369_10231481
308 Ga0157378_10058038
309 Ga0163162_10230783
310 Ga0157372_10149848
311 Ga0157372_10286708
312 Ga0157375_10047523
313 Ga0157375_10178931
314 Ga0157376_10211934
315 Ga0209129_1000079
316 Ga0209025_1002025
317 Ga0207655_1005661
318 Ga0207655_1026842
319 Ga0207684_10000799
320 Ga0207684_10027783
321 Ga0207684_10097920
322 Ga0207684_10171578
323 Ga0207707_10013623
324 Ga0207646_10006459
325 Ga0207646_10011868
326 Ga0207646_10027368
327 Ga0207646_10039694
328 Ga0207646_10150848
329 Ga0207650_10113636
330 Ga0207659_10005734
331 Ga0207687_10124356
332 Ga0207700_10161991
333 Ga0207690_10043685
334 Ga0207706_10017468
335 Ga0207665_10058790
336 Ga0207661_10013859
337 Ga0207661_10090799
338 Ga0207658_10074091
339 Ga0207658_10082882
340 Ga0207677_10003368
341 Ga0207708_10021780
342 Ga0207674_10015576
343 Ga0207698_10078371
344 Ga0207428_10000696
345 Ga0207428_10059574
346 Ga0307408_100005508
347 Ga0307408_100123646
348 Ga0307405_10020688
349 Ga0307413_10002794
350 Ga0307410_10009043
351 Ga0307406_10014549
352 Ga0307407_10071196
353 Ga0307407_10072842
354 Ga0307409_100003538
355 Ga0307409_100200541
356 Ga0307416_100059147
357 Ga0307416_100198148
358 Ga0307414_10002688
359 Ga0307414_10029128
360 Ga0307411_10009774
361 Ga0307415_100030154
362 Ga0307415_100038575
363 Ga0316583_10000753
364 Ga0373923_0025866
365 Ga0373936_0000390
366 Ga0373957_0023573
367 Ga0373943_0000092
368 Ga0373935_0001269
369 Ga0373927_0000056
370 Ga0373947_0000369
371 Ga0373947_0051113
372 Ga0373937_0211074
373 Ga0373925_0003309
374 Ga0395899_0033583
375 Ga0395900_0008923
376 Ga0395900_0015977
377 Ga0395898_0013285
378 Ga0395898_0031657
379 Ga0395898_0049392
380 Ga0395898_0234482
381 Ga0395901_0003578
382 Ga0395901_0116013
383 Ga0436365_1718037
384 Ga0436361_0147964
385 Ga0436363_0214036
386 Ga0436363_1015572
387 Ga0466971_0013902
388 Ga0466967_0157361
389 Ga0495592_0022971
390 Ga0495653_0002574
391 Ga0495653_0053368
392 Ga0495585_0126340
393 Ga0495628_0013464
394 Ga0495628_0057599
395 Ga0495628_0080201
396 Ga0495630_0121829
397 Ga0495666_0027948
398 Ga0495587_0007261
399 Ga0495587_0067378
400 Ga0495656_0017736
401 Ga0495588_0021210
402 Ga0495658_0033964
403 Ga0495624_0073721
404 Ga0495670_0019643
405 Ga0495636_0009956
406 Ga0495674_0225235
407 Ga0495680_0066386
408 Ga0495675_0036133
409 Ga0495675_0053662
410 Ga0495681_0055365
411 Ga0496100_0002489
412 Ga0496101_0003572
413 Ga0496102_0030784
414 Ga0496102_0106724
415 Ga0496103_0090597
416 Ga0496105_0204516
417 Ga0496106_0016709
418 Ga0496106_0148066
419 Ga0496107_0099258
420 Ga0496108_0043522
421 Ga0496109_0086205
422 Ga0496111_0013591
423 Ga0496112_0056722
424 Ga0496115_0057672
425 Ga0496115_0060157
426 Ga0496115_0303537
427 Ga0496121_0013756
428 Ga0496126_0011694
429 Ga0501031_0128772
430 Ga0501032_0011806
431 Ga0501036_0074556
432 Ga0501038_0151326
433 Ga0501040_0001591
434 Ga0501040_0068276
435 Ga0501041_0008848
436 Ga0501042_0054253
437 Ga0501042_0096941
438 Ga0501043_0005898
439 Ga0501046_0050221
440 Ga0501046_0197610
441 Ga0501070_0008518
442 Ga0501071_0019165
443 Ga0501071_0061702
444 Ga0501072_0027547
445 Ga0501073_0111133
446 Ga0501076_0018185
447 Ga0501077_0025668
448 Ga0501077_0060826
449 Ga0501077_0096108
450 Ga0501080_0081602
451 Ga0501081_0030067
452 Ga0501044_0078393
453 Ga0501045_0007789
454 Ga0501045_0045588
455 nmdc:mga05p37_58471_c1
456 nmdc:mga0qj67_41679_c1
457 nmdc:mga06r32_56960_c1
458 nmdc:mga08y16_12086_c1
459 nmdc:mga08y16_234881_c1
460 nmdc:mga08y16_62994_c1
461 nmdc:mga0n895_172_c1
462 nmdc:mga0n895_23329_c1
463 nmdc:mga0rr50_362_c1
464 nmdc:mga08x19_17697_c1
465 nmdc:mga0a205_2477_c2
466 nmdc:mga0a205_6275_c1
467 Ga0500635_0001108
468 Ga0495619_0007992
469 Ga0500583_0010718
470 Ga0500616_0000011
471 Ga0501084_0011413
472 Ga0501082_0087669
473 Ga0466962_0028316
474 Ga0530510_0011696
475 Ga0530510_0020837
476 2644517405
477 2739363695
478 2808877855
479 2808891068
480 2816425319
481 2904778634
482 2919053148
483 2919060713
484 2919392788
485 2939648026
486 2974302913

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01565

FAD_binding_4

FAD binding domain

113

248

0.98

PF08031

BBE

Berberine and berberine like

484

528

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fye-assembly1.cif.gz_B-2 the crystal structure of encm h138t mutant 0.9595 1 449
6fyf-assembly3.cif.gz_C the crystal structure of encm v135m mutant 0.9582 1 448
6fyb-assembly1.cif.gz_A the crystal structure of encm l144m mutant 0.958 1 449
6fye-assembly1.cif.gz_B-2 the crystal structure of encm h138t mutant 0.9574 1 449
6fyg-assembly1.cif.gz_A the crystal structure of encm v135t mutant 0.9561 1 448
ID Description Score Start End Superfamily
3w8wB01 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 0.9776 15 90 3.30.43.10
af_Q55CU9_33_111_3.30.43.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 0.9621 15 90 3.30.43.10
af_O53608_47_126_3.30.43.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 0.9612 15 89 3.30.43.10
2bvfA01 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 0.9574 15 89 3.30.43.10
6fycB03 Alpha Beta;3-Layer(aba) Sandwich;Vanillyl-alcohol Oxidase; Chain A, domain 3; 0.9393 198 408 3.40.462.20
ID Description Score Start End GO Terms
AF-A0A0F0HWX2-F1-model_v4 FAD-binding PCMH-type domain-containing protein 0.9733 1 449 GO:0016491
GO:0071949
AF-A0A431UYG7-F1-model_v4 FAD-binding oxidoreductase 0.9722 1 449 GO:0016491
GO:0071949
AF-A0A0F0HWX2-F1-model_v4 FAD-binding PCMH-type domain-containing protein 0.9712 1 449 GO:0016491
GO:0071949
AF-A0A658A747-F1-model_v4 deleted 0.9705 64 430
AF-A0A431UYG7-F1-model_v4 FAD-binding oxidoreductase 0.9701 1 449 GO:0016491
GO:0071949

Map