F355651

General Info

Members Datasets Scaffolds Average Seq Length
243 198 216 309

Family's Representative Sequence

Representative Sequence 3300025913|Ga0207695_10139186|Ga0207695_101391861
Length 371
Sequence MLWLSQQRLCLRTLLGHEAEETHKPGPSLLRDPRMEPARWKRIDLPSSPTRVGLNRMEITMSTMKAVCIHSFGGPEVLKVESIERPTPQADEVLIKVHAASVNPVDYKIRSGGYPAVKKQQLPKVLGRDVSGTIEECGRAVQNMQEGDEVYAMLDGGPGGYAEYVAVKANLCAPKPKQLDYTAAAAVPLAALTAWQGLFDHGHLLAGQRVLIHGGAGGVGHFAIQFAKASGATVCTTVSAEDEAFVRSLGADEVVDYKSERFEQKVHDVDLVFDLVAGDTQERSWAVLKDGGTLISTLAKPSEARAREHHARAAHYMAHPDGTELKEIGTLIDSGKVKPHIDATYPLERAAEAQQRIEGQHTQGKVVLQVS

Samples

Sample ID Description Type Environment
1 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
2 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
3 2599185302 Pseudomonas sp. NFACC43 Isolate Rhizoplane
4 2599185304 Pseudomonas sp. NFACC47-1 Isolate Rhizoplane
5 2599185309 Pseudomonas sp. NFACC49-2 Isolate Rhizoplane
6 2599185310 Pseudomonas sp. NFACC09-4 Isolate Rhizoplane
7 2599185312 Pseudomonas sp. NFACC32-1 Isolate Rhizoplane
8 2599185320 Pseudomonas sp. NFACC36 Isolate Rhizoplane
9 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
10 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
11 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
12 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
13 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
14 2818991446 Variovorax sp. 1180 Isolate Unclassified
15 2842854478 Pseudomonas sp. R-71998 Isolate Unclassified
16 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
17 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
18 2899924645 Variovorax sp. 369 Isolate Unclassified
19 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
20 2928037797 Variovorax sp. 1126 Isolate Unclassified
21 2928044640 Variovorax sp. 1128 Isolate Unclassified
22 2928051484 Variovorax sp. 1133 Isolate Unclassified
23 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
24 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
25 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
26 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
27 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
28 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
29 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
30 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
31 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
32 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
33 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
34 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
35 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
36 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
37 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
38 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
39 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
40 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
41 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
42 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
43 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
44 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
45 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
46 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
47 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
48 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
49 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
50 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
51 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
52 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
53 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
54 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
55 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
56 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
57 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
58 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
59 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
60 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
61 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
62 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
63 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
64 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
65 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
66 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
72 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
99 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
102 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
103 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
107 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
110 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
116 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
122 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
123 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
124 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
125 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
126 3300042116 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126F_E14_082316_1792 Metagenome Rhizosphere
127 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
128 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
129 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
130 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
131 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
132 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
133 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
134 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
135 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
136 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
137 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
138 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
141 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
142 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
143 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
144 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
145 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
146 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
147 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
148 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
149 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
152 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
153 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
154 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
155 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
161 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
162 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
165 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
166 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
173 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
174 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
175 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
178 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
179 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
180 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
181 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
182 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
183 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
186 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
187 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
188 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
189 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
190 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
191 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
192 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
193 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
194 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
195 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
196 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
197 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
198 8056143049 Pseudomonas alvandae SWRI17 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.89
Metatranscriptomes 0
Isolates 11.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.52
Nodule 0.41
Rhizoplane 7
Rhizosphere 67.49
Stem 0
Stem Tuber 0.41
Unclassified 13.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10033857 3300003320 Bacteria 4552
2 rootL2_10167669 3300003322 Bacteria 2224
3 rootL2_10198174 3300003322 Bacteria 9772
4 rootH1_10007952 3300003323 Bacteria 103524
5 rootH1_10098657 3300003323 Bacteria 5160
6 rootH1_10296936 3300003323 Unclassified 2679
7 Ga0055535_1000470 3300003761 Bacteria 36908
8 Ga0055542_1000073 3300003762 Bacteria 145255
9 Ga0055542_1002177 3300003762 Bacteria 7029
10 Ga0065715_10111232 3300005293 Bacteria 2583
11 Ga0070683_100018504 3300005329 Bacteria 6172
12 Ga0070683_100454196 3300005329 Bacteria 1223
13 Ga0070680_100007296 3300005336 Bacteria 8427
14 Ga0070674_100144547 3300005356 Bacteria 1789
15 Ga0070709_10176487 3300005434 Bacteria 1497
16 Ga0070714_100175964 3300005435 Bacteria 1944
17 Ga0070705_100061255 3300005440 Bacteria 2236
18 Ga0070694_100043631 3300005444 Bacteria 2999
19 Ga0070694_100196028 3300005444 Bacteria 1503
20 Ga0070694_100244479 3300005444 Bacteria 1355
21 Ga0070708_100151841 3300005445 Bacteria 2154
22 Ga0070681_10325033 3300005458 Bacteria 1448
23 Ga0070706_100015886 3300005467 Bacteria 6950
24 Ga0070707_100376046 3300005468 Bacteria 1380
25 Ga0070699_100063400 3300005518 Bacteria 3205
26 Ga0070679_100055807 3300005530 Bacteria 3934
27 Ga0070684_100033200 3300005535 Bacteria 4404
28 Ga0070684_100208794 3300005535 Bacteria 1780
29 Ga0070697_100398135 3300005536 Bacteria 1194
30 Ga0070686_100042337 3300005544 Bacteria 2852
31 Ga0070695_100039768 3300005545 Bacteria 2974
32 Ga0070696_100047135 3300005546 Bacteria 2990
33 Ga0070665_100033926 3300005548 Bacteria 5134
34 Ga0070704_100002351 3300005549 Bacteria 10610
35 Ga0068855_100057004 3300005563 Bacteria 4581
36 Ga0081455_10003142 3300005937 Bacteria 19205
37 Ga0081455_10052879 3300005937 Bacteria 3473
38 Ga0081538_10008657 3300005981 Bacteria 8603
39 Ga0081540_1000115 3300005983 Bacteria 84188
40 Ga0075368_10000003 3300006042 Bacteria 56143
41 Ga0075363_100011395 3300006048 Unclassified 4255
42 Ga0070716_100019966 3300006173 Bacteria 3511
43 Ga0070712_100072862 3300006175 Bacteria 2462
44 Ga0075367_10000031 3300006178 Bacteria 30935
45 Ga0075366_10000026 3300006195 Bacteria 51752
46 Ga0075433_10082638 3300006852 Bacteria 2833
47 Ga0075434_100162175 3300006871 Bacteria 2255
48 Ga0075436_100070789 3300006914 Bacteria 2411
49 Ga0075435_100206077 3300007076 Bacteria 1667
50 Ga0105240_10025953 3300009093 Bacteria 7695
51 Ga0105240_10029194 3300009093 Bacteria 7191
52 Ga0105240_10148105 3300009093 Bacteria 2799
53 Ga0114129_10911043 3300009147 Unclassified 1113
54 Ga0105237_10028855 3300009545 Bacteria 5646
55 Ga0105237_10062212 3300009545 Bacteria 3732
56 Ga0105237_10257620 3300009545 Bacteria 1747
57 Ga0105238_10298154 3300009551 Bacteria 1595
58 Ga0105032_100001 3300009979 Bacteria 472394
59 Ga0105239_10027408 3300010375 Bacteria 6271
60 Ga0105239_10274599 3300010375 Bacteria 1896
61 Ga0157371_10037266 3300013102 Bacteria 3481
62 Ga0157371_10043052 3300013102 Bacteria 3217
63 Ga0157369_10100905 3300013105 Unclassified 3076
64 Ga0163162_10000564 3300013306 Bacteria 34206
65 Ga0157380_10007000 3300014326 Bacteria 7986
66 Ga0157379_10006931 3300014968 Bacteria 9798
67 Ga0182006_1010250 3300015261 Bacteria 4174
68 Ga0163161_10000012 3300017792 Bacteria 264639
69 Ga0209672_100195 3300025228 Bacteria 48946
70 Ga0209147_101700 3300025229 Bacteria 7152
71 Ga0209258_100069 3300025242 Bacteria 280496
72 Ga0209148_1000076 3300025254 Bacteria 301449
73 Ga0209148_1000146 3300025254 Bacteria 160734
74 Ga0207684_10149496 3300025910 Bacteria 2009
75 Ga0207707_10155856 3300025912 Bacteria 1997
76 Ga0207695_10029557 3300025913 Bacteria 6051
77 Ga0207695_10139186 3300025913 Bacteria 2377
78 Ga0207671_10043730 3300025914 Bacteria 3312
79 Ga0207693_10022598 3300025915 Bacteria 4996
80 Ga0207660_10040085 3300025917 Bacteria 3277
81 Ga0207646_10238591 3300025922 Bacteria 1642
82 Ga0207700_10022241 3300025928 Bacteria 4347
83 Ga0207669_10091275 3300025937 Bacteria 1984
84 Ga0207665_10097625 3300025939 Bacteria 2046
85 Ga0207667_10036646 3300025949 Bacteria 5253
86 Ga0207708_10374131 3300026075 Bacteria 1173
87 Ga0209813_10000004 3300027866 Bacteria 139340
88 Ga0268266_10002557 3300028379 Bacteria 19304
89 Ga0265334_10000022 3300028573 Bacteria 127132
90 Ga0307517_10000803 3300028786 Bacteria 53852
91 Ga0307515_10000300 3300028794 Bacteria 122040
92 Ga0307515_10025144 3300028794 Bacteria 10323
93 Ga0307515_10060279 3300028794 Bacteria 5416
94 Ga0265320_10038485 3300031240 Unclassified 2399
95 Ga0265327_10000025 3300031251 Bacteria 380054
96 Ga0265327_10004747 3300031251 Bacteria 11850
97 Ga0307513_10132939 3300031456 Bacteria 2430
98 Ga0307408_100000003 3300031548 Bacteria 618438
99 Ga0307408_100000066 3300031548 Bacteria 121679
100 Ga0307408_100000112 3300031548 Bacteria 89783
101 Ga0265314_10104203 3300031711 Unclassified 1817
102 Ga0316578_10135605 3300031728 Bacteria 1482
103 Ga0307516_10071131 3300031730 Bacteria 3340
104 Ga0307405_10011847 3300031731 Bacteria 4590
105 Ga0307410_10000011 3300031852 Bacteria 80087
106 Ga0307406_10009213 3300031901 Bacteria 5530
107 Ga0307412_10000747 3300031911 Bacteria 18841
108 Ga0307412_10001082 3300031911 Bacteria 15573
109 Ga0307412_10040971 3300031911 Unclassified 2999
110 Ga0307409_100000044 3300031995 Bacteria 44244
111 Ga0307409_100219985 3300031995 Bacteria 1714
112 Ga0307416_100000137 3300032002 Bacteria 42935
113 Ga0307416_100398084 3300032002 Bacteria 1414
114 Ga0307414_10069472 3300032004 Bacteria 2532
115 Ga0307411_10007411 3300032005 Bacteria 5588
116 Ga0373934_0081255 3300035086 Bacteria 1302
117 Ga0395900_0331847 3300037418 Bacteria 1499
118 Ga0395898_0099138 3300037466 Bacteria 2798
119 Ga0436360_0707874 3300039438 Bacteria 2231
120 Ga0436361_1111155 3300039447 Bacteria 2499
121 Ga0436363_1245000 3300039450 Bacteria 3867
122 Ga0439447_006453 3300041407 Bacteria 3806
123 Ga0439447_010857 3300041407 Bacteria 2685
124 Ga0439466_0003412 3300041411 Bacteria 6165
125 Ga0451837_1347126 3300041494 Bacteria 1326
126 Ga0439452_000097 3300042010 Bacteria 74034
127 Ga0450912_000130 3300042116 Bacteria 2819
128 Ga0450891_000308 3300042129 Bacteria 5006
129 Ga0450902_000063 3300042137 Bacteria 10429
130 Ga0451577_0005197 3300042876 Bacteria 13392
131 Ga0451577_0190820 3300042876 Bacteria 1848
132 Ga0451577_0287950 3300042876 Bacteria 1489
133 Ga0466972_0018986 3300044658 Bacteria 3437
134 Ga0453683_0000004 3300044673 Bacteria 759456
135 Ga0453683_0000198 3300044673 Bacteria 81903
136 Ga0453683_0003449 3300044673 Bacteria 11652
137 Ga0466966_0003217 3300044684 Bacteria 10766
138 Ga0466966_0062250 3300044684 Unclassified 2353
139 Ga0466961_0003589 3300044693 Bacteria 9680
140 Ga0466964_0075327 3300044706 Bacteria 1436
141 Ga0453684_0019373 3300044712 Bacteria 10363
142 Ga0453684_0029510 3300044712 Bacteria 7784
143 Ga0453684_0119798 3300044712 Bacteria 3180
144 Ga0466971_0009658 3300044719 Bacteria 4209
145 Ga0466957_0001708 3300044842 Bacteria 11552
146 Ga0466959_0005736 3300045049 Bacteria 8541
147 Ga0466959_0020474 3300045049 Bacteria 4875
148 Ga0466959_0120292 3300045049 Bacteria 1868
149 Ga0451576_0000005 3300045051 Bacteria 1294643
150 Ga0451576_0129402 3300045051 Bacteria 2631
151 Ga0495592_0121547 3300046454 Bacteria 1836
152 Ga0495582_0289617 3300046473 Unclassified 941
153 Ga0495664_0043032 3300046477 Bacteria 2676
154 Ga0495594_0000004 3300046499 Bacteria 195881
155 Ga0495630_0012998 3300046517 Bacteria 6048
156 Ga0495652_0000066 3300046529 Bacteria 109895
157 Ga0495665_0104690 3300046531 Bacteria 1485
158 Ga0495645_0089235 3300046543 Bacteria 2205
159 Ga0495622_0000016 3300046557 Bacteria 177089
160 Ga0495633_0118713 3300046558 Bacteria 1225
161 Ga0495625_0000252 3300046660 Bacteria 83831
162 Ga0495625_0003696 3300046660 Bacteria 14966
163 Ga0495625_0028333 3300046660 Bacteria 4202
164 Ga0495613_0083416 3300046689 Unclassified 2321
165 Ga0495613_0200503 3300046689 Bacteria 1407
166 Ga0495624_0095919 3300046690 Bacteria 1827
167 Ga0495674_0056892 3300047319 Bacteria 3424
168 Ga0495684_0016205 3300047471 Bacteria 5739
169 Ga0495686_0007727 3300047472 Bacteria 8016
170 Ga0496104_0015719 3300048907 Bacteria 6865
171 Ga0496105_0029336 3300048908 Bacteria 4503
172 Ga0496105_0152775 3300048908 Bacteria 1897
173 Ga0496108_0057066 3300048911 Bacteria 3281
174 Ga0496109_0031717 3300048912 Bacteria 4745
175 Ga0496110_0108383 3300048913 Bacteria 2493
176 Ga0496110_0164929 3300048913 Bacteria 2009
177 Ga0496113_0147395 3300048916 Bacteria 1855
178 Ga0496114_0310489 3300048917 Bacteria 1393
179 Ga0496115_0005483 3300048918 Bacteria 9232
180 Ga0496121_0059404 3300048924 Bacteria 3153
181 Ga0496124_0003569 3300048927 Bacteria 18917
182 Ga0496124_0059362 3300048927 Bacteria 3214
183 Ga0501032_0000585 3300049569 Bacteria 29325
184 Ga0501034_0193565 3300049571 Bacteria 1995
185 Ga0501036_0072687 3300049572 Bacteria 2907
186 Ga0501043_0019574 3300049579 Bacteria 5313
187 Ga0501046_0007621 3300049580 Bacteria 9494
188 Ga0501047_0160428 3300049581 Bacteria 2120
189 Ga0501217_003836 3300049661 Bacteria 3059
190 Ga0501227_020063 3300049665 Bacteria 1529
191 Ga0501249_000011 3300049679 Bacteria 168084
192 Ga0501035_0001654 3300049822 Bacteria 22526
193 Ga0501035_0102034 3300049822 Bacteria 2517
194 Ga0501044_0002160 3300049823 Bacteria 22548
195 Ga0501226_001306 3300049853 Bacteria 3216
196 nmdc:mga03n38_580_c1 3300050490 Bacteria 9287
197 nmdc:mga0k408_26_c4 3300050493 Bacteria 51744
198 nmdc:mga06z11_6_c1 3300050494 Bacteria 124054
199 nmdc:mga04h51_4_c1 3300050495 Bacteria 139342
200 nmdc:mga07m45_4665_c1 3300050496 Bacteria 6728
201 nmdc:mga05p37_627379_c1 3300050507 Bacteria 1208
202 nmdc:mga0n895_510682_c1 3300050512 Bacteria 1210
203 nmdc:mga0rr50_108039_c1 3300050513 Bacteria 2197
204 nmdc:mga08x19_143262_c1 3300050514 Bacteria 1615
205 nmdc:mga0a205_129514_c1 3300050515 Bacteria 2424
206 nmdc:mga0a205_295221_c1 3300050515 Bacteria 1494
207 nmdc:mga0sz30_76857_c1 3300050516 Bacteria 1442
208 Ga0500578_0000012 3300053086 Bacteria 188658
209 Ga0500644_0012276 3300053088 Bacteria 2364
210 Ga0500651_0185182 3300053093 Bacteria 1235
211 Ga0500560_000059 3300053107 Bacteria 10296
212 Ga0500658_0000009 3300053134 Bacteria 270303
213 Ga0500604_0016324 3300053151 Bacteria 2044
214 Ga0500624_002981 3300053157 Unclassified 2237
215 Ga0500633_0000089 3300053160 Bacteria 12930
216 Ga0500634_0096629 3300053161 Bacteria 1487

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300026075 Ga0207708_10374131 Ga0207708_103741312 241
2 3300046473 Ga0495582_0289617 Ga0495582_0289617_110_865 245
3 3300006852 Ga0075433_10082638 Ga0075433_100826383 269
4 3300050515 nmdc:mga0a205_129514_c1 nmdc:mga0a205_129514_c1_551_1405 269
5 3300053157 Ga0500624_002981 Ga0500624_002981_84_917 270
6 3300005563 Ga0068855_100057004 Ga0068855_1000570043 285
7 3300025913 Ga0207695_10029557 Ga0207695_100295576 285
8 3300025914 Ga0207671_10043730 Ga0207671_100437302 285
9 3300025949 Ga0207667_10036646 Ga0207667_100366464 285
10 3300045049 Ga0466959_0120292 Ga0466959_0120292_250_1227 287
11 3300031251 Ga0265327_10004747 Ga0265327_100047475 289
12 3300006195 Ga0075366_10000026 Ga0075366_1000002621 291
13 3300028786 Ga0307517_10000803 Ga0307517_1000080327 291
14 3300028794 Ga0307515_10060279 Ga0307515_100602792 291
15 3300046499 Ga0495594_0000004 Ga0495594_0000004_66903_67862 291
16 3300046557 Ga0495622_0000016 Ga0495622_0000016_32561_33520 291
17 3300046660 Ga0495625_0003696 Ga0495625_0003696_14012_14938 291
18 3300048907 Ga0496104_0015719 Ga0496104_0015719_510_1469 291
19 3300048908 Ga0496105_0152775 Ga0496105_0152775_280_1239 291
20 3300048911 Ga0496108_0057066 Ga0496108_0057066_124_1083 291
21 3300048912 Ga0496109_0031717 Ga0496109_0031717_3067_4026 291
22 3300048913 Ga0496110_0108383 Ga0496110_0108383_1075_2034 291
23 3300048916 Ga0496113_0147395 Ga0496113_0147395_485_1444 291
24 3300048917 Ga0496114_0310489 Ga0496114_0310489_288_1247 291
25 3300050493 nmdc:mga0k408_26_c4 nmdc:mga0k408_26_c4_18250_19176 291
26 3300050513 nmdc:mga0rr50_108039_c1 nmdc:mga0rr50_108039_c1_464_1372 291
27 3300005981 Ga0081538_10008657 Ga0081538_100086577 293
28 3300037418 Ga0395900_0331847 Ga0395900_0331847_227_1126 293
29 3300037466 Ga0395898_0099138 Ga0395898_0099138_1603_2502 293
30 3300005329 Ga0070683_100454196 Ga0070683_1004541961 294
31 3300005434 Ga0070709_10176487 Ga0070709_101764872 294
32 3300005535 Ga0070684_100033200 Ga0070684_1000332004 294
33 3300006173 Ga0070716_100019966 Ga0070716_1000199663 294
34 3300006175 Ga0070712_100072862 Ga0070712_1000728622 294
35 3300006871 Ga0075434_100162175 Ga0075434_1001621752 294
36 3300025915 Ga0207693_10022598 Ga0207693_100225982 294
37 3300048913 Ga0496110_0164929 Ga0496110_0164929_888_1790 294
38 3300048927 Ga0496124_0059362 Ga0496124_0059362_1951_2865 294
39 3300050512 nmdc:mga0n895_510682_c1 nmdc:mga0n895_510682_c1_40_942 294
40 3300006914 Ga0075436_100070789 Ga0075436_1000707892 295
41 3300007076 Ga0075435_100206077 Ga0075435_1002060771 295
42 3300009147 Ga0114129_10911043 Ga0114129_109110431 295
43 3300013306 Ga0163162_10000564 Ga0163162_1000056413 295
44 3300031995 Ga0307409_100219985 Ga0307409_1002199851 295
45 3300039447 Ga0436361_1111155 Ga0436361_1111155_638_1567 295
46 3300050507 nmdc:mga05p37_627379_c1 nmdc:mga05p37_627379_c1_274_1179 295
47 3300050514 nmdc:mga08x19_143262_c1 nmdc:mga08x19_143262_c1_579_1484 295
48 3300005356 Ga0070674_100144547 Ga0070674_1001445472 296
49 3300005440 Ga0070705_100061255 Ga0070705_1000612552 296
50 3300005444 Ga0070694_100043631 Ga0070694_1000436312 296
51 3300005444 Ga0070694_100196028 Ga0070694_1001960281 296
52 3300005444 Ga0070694_100244479 Ga0070694_1002444792 296
53 3300005445 Ga0070708_100151841 Ga0070708_1001518412 296
54 3300005467 Ga0070706_100015886 Ga0070706_1000158862 296
55 3300005518 Ga0070699_100063400 Ga0070699_1000634005 296
56 3300005536 Ga0070697_100398135 Ga0070697_1003981351 296
57 3300005544 Ga0070686_100042337 Ga0070686_1000423374 296
58 3300005545 Ga0070695_100039768 Ga0070695_1000397683 296
59 3300005546 Ga0070696_100047135 Ga0070696_1000471355 296
60 3300005549 Ga0070704_100002351 Ga0070704_1000023514 296
61 3300005937 Ga0081455_10003142 Ga0081455_100031427 296
62 3300014326 Ga0157380_10007000 Ga0157380_1000700012 296
63 3300025910 Ga0207684_10149496 Ga0207684_101494961 296
64 3300025922 Ga0207646_10238591 Ga0207646_102385912 296
65 3300025937 Ga0207669_10091275 Ga0207669_100912752 296
66 3300025939 Ga0207665_10097625 Ga0207665_100976253 296
67 3300035086 Ga0373934_0081255 Ga0373934_0081255_169_1167 296
68 3300039438 Ga0436360_0707874 Ga0436360_0707874_722_1651 296
69 3300046660 Ga0495625_0000252 Ga0495625_0000252_11818_12744 296
70 3300046660 Ga0495625_0028333 Ga0495625_0028333_852_1778 296
71 3300050515 nmdc:mga0a205_295221_c1 nmdc:mga0a205_295221_c1_349_1272 296
72 3300053086 Ga0500578_0000012 Ga0500578_0000012_6631_7566 296
73 iso_pu_bacteria 2738541279 2738732301 296
74 iso_pu_bacteria 2738541285 2738764866 296
75 iso_pu_bacteria 2738543007 2739213881 296
76 iso_pu_bacteria 2857618242 2857622705 296
77 iso_pu_bacteria 2929177148 2929183070 296
78 iso_pu_bacteria 2946013367 2946015116 296
79 3300039450 Ga0436363_1245000 Ga0436363_1245000_2008_3051 297
80 iso_pu_bacteria 2537561728 2538425594 297
81 3300044658 Ga0466972_0018986 Ga0466972_0018986_2265_3197 298
82 3300005468 Ga0070707_100376046 Ga0070707_1003760461 299
83 3300009545 Ga0105237_10257620 Ga0105237_102576202 299
84 3300046543 Ga0495645_0089235 Ga0495645_0089235_946_1875 299
85 3300049569 Ga0501032_0000585 Ga0501032_0000585_28316_29248 299
86 3300049572 Ga0501036_0072687 Ga0501036_0072687_1807_2739 299
87 3300049579 Ga0501043_0019574 Ga0501043_0019574_3095_4027 299
88 3300049580 Ga0501046_0007621 Ga0501046_0007621_1399_2331 299
89 3300049581 Ga0501047_0160428 Ga0501047_0160428_1010_1942 299
90 3300049822 Ga0501035_0001654 Ga0501035_0001654_73_1005 299
91 3300049823 Ga0501044_0002160 Ga0501044_0002160_59_991 299
92 iso_pu_bacteria 2508501123 2509117821 299
93 3300003322 rootL2_10198174 rootL2_101981748 300
94 3300013102 Ga0157371_10043052 Ga0157371_100430523 300
95 3300017792 Ga0163161_10000012 Ga0163161_10000012209 300
96 3300028794 Ga0307515_10000300 Ga0307515_1000030081 300
97 3300028794 Ga0307515_10025144 Ga0307515_100251444 300
98 3300031548 Ga0307408_100000003 Ga0307408_100000003276 300
99 3300031730 Ga0307516_10071131 Ga0307516_100711312 300
100 3300031852 Ga0307410_10000011 Ga0307410_1000001110 300
101 3300031911 Ga0307412_10040971 Ga0307412_100409711 300
102 3300031995 Ga0307409_100000044 Ga0307409_10000004437 300
103 3300032002 Ga0307416_100000137 Ga0307416_10000013725 300
104 3300041494 Ga0451837_1347126 Ga0451837_1347126_76_1056 300
105 3300046558 Ga0495633_0118713 Ga0495633_0118713_138_1115 300
106 3300046689 Ga0495613_0083416 Ga0495613_0083416_549_1565 300
107 3300048924 Ga0496121_0059404 Ga0496121_0059404_1922_2845 300
108 3300049661 Ga0501217_003836 Ga0501217_003836_804_1727 300
109 3300049679 Ga0501249_000011 Ga0501249_000011_29170_30093 300
110 3300053088 Ga0500644_0012276 Ga0500644_0012276_1185_2108 300
111 3300053107 Ga0500560_000059 Ga0500560_000059_4301_5278 300
112 3300053151 Ga0500604_0016324 Ga0500604_0016324_476_1399 300
113 3300053160 Ga0500633_0000089 Ga0500633_0000089_6622_7545 300
114 3300053161 Ga0500634_0096629 Ga0500634_0096629_136_1113 300
115 iso_pu_bacteria 2738541276 2738713572 300
116 iso_pu_bacteria 2925326138 2925332883 300
117 3300005293 Ga0065715_10111232 Ga0065715_101112322 301
118 3300009093 Ga0105240_10029194 Ga0105240_100291943 301
119 3300009545 Ga0105237_10062212 Ga0105237_100622122 301
120 3300010375 Ga0105239_10027408 Ga0105239_100274084 301
121 3300031251 Ga0265327_10000025 Ga0265327_10000025260 301
122 3300044673 Ga0453683_0000198 Ga0453683_0000198_74061_74984 301
123 3300046477 Ga0495664_0043032 Ga0495664_0043032_1297_2220 301
124 3300046517 Ga0495630_0012998 Ga0495630_0012998_501_1424 301
125 3300046531 Ga0495665_0104690 Ga0495665_0104690_118_1041 301
126 3300046690 Ga0495624_0095919 Ga0495624_0095919_128_1051 301
127 3300047319 Ga0495674_0056892 Ga0495674_0056892_2444_3367 301
128 3300047471 Ga0495684_0016205 Ga0495684_0016205_4789_5712 301
129 3300050516 nmdc:mga0sz30_76857_c1 nmdc:mga0sz30_76857_c1_109_1032 301
130 3300053093 Ga0500651_0185182 Ga0500651_0185182_58_999 301
131 3300053134 Ga0500658_0000009 Ga0500658_0000009_39041_39970 301
132 iso_pu_bacteria 2871282230 2871286001 301
133 3300003762 Ga0055542_1002177 Ga0055542_10021774 302
134 3300005329 Ga0070683_100018504 Ga0070683_1000185049 302
135 3300005336 Ga0070680_100007296 Ga0070680_1000072964 302
136 3300005435 Ga0070714_100175964 Ga0070714_1001759641 302
137 3300005458 Ga0070681_10325033 Ga0070681_103250331 302
138 3300005530 Ga0070679_100055807 Ga0070679_1000558071 302
139 3300005535 Ga0070684_100208794 Ga0070684_1002087942 302
140 3300005937 Ga0081455_10052879 Ga0081455_100528793 302
141 3300009093 Ga0105240_10148105 Ga0105240_101481051 302
142 3300009551 Ga0105238_10298154 Ga0105238_102981541 302
143 3300013105 Ga0157369_10100905 Ga0157369_101009053 302
144 3300014968 Ga0157379_10006931 Ga0157379_100069317 302
145 3300025254 Ga0209148_1000146 Ga0209148_1000146113 302
146 3300025912 Ga0207707_10155856 Ga0207707_101558562 302
147 3300025913 Ga0207695_10139186 Ga0207695_101391861 302
148 3300025917 Ga0207660_10040085 Ga0207660_100400855 302
149 3300025928 Ga0207700_10022241 Ga0207700_100222413 302
150 3300031456 Ga0307513_10132939 Ga0307513_101329392 302
151 3300044684 Ga0466966_0003217 Ga0466966_0003217_3014_3940 302
152 3300044684 Ga0466966_0062250 Ga0466966_0062250_532_1509 302
153 3300044693 Ga0466961_0003589 Ga0466961_0003589_1345_2271 302
154 3300044706 Ga0466964_0075327 Ga0466964_0075327_249_1175 302
155 3300044712 Ga0453684_0119798 Ga0453684_0119798_1701_2633 302
156 3300044719 Ga0466971_0009658 Ga0466971_0009658_1299_2225 302
157 3300044842 Ga0466957_0001708 Ga0466957_0001708_8882_9808 302
158 3300045049 Ga0466959_0005736 Ga0466959_0005736_1539_2474 302
159 3300045049 Ga0466959_0020474 Ga0466959_0020474_2838_3815 302
160 iso_pu_bacteria 2599185302 2599944980 302
161 iso_pu_bacteria 2599185304 2599955291 302
162 iso_pu_bacteria 2599185309 2599984023 302
163 iso_pu_bacteria 2599185310 2599990256 302
164 iso_pu_bacteria 2599185312 2600001804 302
165 iso_pu_bacteria 2599185320 2600048790 302
166 iso_pu_bacteria 2818991446 2819598398 302
167 iso_pu_bacteria 2842854478 2842857817 302
168 iso_pu_bacteria 2899924645 2899926182 302
169 iso_pu_bacteria 2928037797 2928044111 302
170 iso_pu_bacteria 2928044640 2928050950 302
171 iso_pu_bacteria 2928051484 2928057210 302
172 iso_pu_bacteria 2928064002 2928069274 302
173 iso_pu_bacteria 3002998708 3002999962 302
174 iso_pu_bacteria 8056143049 8056146368 302
175 3300003323 rootH1_10296936 rootH1_102969361 303
176 3300005548 Ga0070665_100033926 Ga0070665_1000339262 303
177 3300009093 Ga0105240_10025953 Ga0105240_100259537 303
178 3300009545 Ga0105237_10028855 Ga0105237_100288558 303
179 3300010375 Ga0105239_10274599 Ga0105239_102745992 303
180 3300028379 Ga0268266_10002557 Ga0268266_1000255726 303
181 3300031240 Ga0265320_10038485 Ga0265320_100384852 303
182 3300042876 Ga0451577_0005197 Ga0451577_0005197_11525_12460 303
183 3300044673 Ga0453683_0000004 Ga0453683_0000004_289266_290201 303
184 3300044673 Ga0453683_0003449 Ga0453683_0003449_1963_2901 303
185 3300044712 Ga0453684_0019373 Ga0453684_0019373_4019_4954 303
186 3300045051 Ga0451576_0000005 Ga0451576_0000005_289266_290201 303
187 3300045051 Ga0451576_0129402 Ga0451576_0129402_731_1675 303
188 3300049822 Ga0501035_0102034 Ga0501035_0102034_287_1222 303
189 3300003323 rootH1_10007952 rootH1_1000795237 304
190 3300005983 Ga0081540_1000115 Ga0081540_100011579 304
191 3300006042 Ga0075368_10000003 Ga0075368_1000000338 304
192 3300006048 Ga0075363_100011395 Ga0075363_1000113955 304
193 3300006178 Ga0075367_10000031 Ga0075367_1000003121 304
194 3300009979 Ga0105032_100001 Ga0105032_100001546 304
195 3300027866 Ga0209813_10000004 Ga0209813_1000000452 304
196 3300031548 Ga0307408_100000112 Ga0307408_1000001129 304
197 3300031711 Ga0265314_10104203 Ga0265314_101042031 304
198 3300031901 Ga0307406_10009213 Ga0307406_100092133 304
199 3300042876 Ga0451577_0190820 Ga0451577_0190820_731_1696 304
200 3300042876 Ga0451577_0287950 Ga0451577_0287950_439_1380 304
201 3300044712 Ga0453684_0029510 Ga0453684_0029510_120_1061 304
202 3300046529 Ga0495652_0000066 Ga0495652_0000066_86167_87117 304
203 3300046689 Ga0495613_0200503 Ga0495613_0200503_220_1182 304
204 3300047472 Ga0495686_0007727 Ga0495686_0007727_2963_3901 304
205 3300049571 Ga0501034_0193565 Ga0501034_0193565_824_1759 304
206 3300050490 nmdc:mga03n38_580_c1 nmdc:mga03n38_580_c1_5818_6759 304
207 3300050494 nmdc:mga06z11_6_c1 nmdc:mga06z11_6_c1_62368_63309 304
208 3300050495 nmdc:mga04h51_4_c1 nmdc:mga04h51_4_c1_91610_92551 304
209 3300050496 nmdc:mga07m45_4665_c1 nmdc:mga07m45_4665_c1_40_981 304
210 3300031728 Ga0316578_10135605 Ga0316578_101356052 305
211 3300041407 Ga0439447_006453 Ga0439447_006453_2585_3529 305
212 3300041407 Ga0439447_010857 Ga0439447_010857_15_959 305
213 3300041411 Ga0439466_0003412 Ga0439466_0003412_548_1492 305
214 3300042010 Ga0439452_000097 Ga0439452_000097_5775_6719 305
215 3300042137 Ga0450902_000063 Ga0450902_000063_198_1142 305
216 3300046454 Ga0495592_0121547 Ga0495592_0121547_102_1043 305
217 3300048908 Ga0496105_0029336 Ga0496105_0029336_2736_3737 305
218 3300048918 Ga0496115_0005483 Ga0496115_0005483_4516_5517 305
219 3300048927 Ga0496124_0003569 Ga0496124_0003569_7938_8972 305
220 iso_pu_bacteria 2738543031 2739351611 305
221 3300003320 rootH2_10033857 rootH2_100338573 306
222 3300003322 rootL2_10167669 rootL2_101676692 306
223 3300003323 rootH1_10098657 rootH1_100986572 306
224 3300003761 Ga0055535_1000470 Ga0055535_100047018 306
225 3300003762 Ga0055542_1000073 Ga0055542_100007394 306
226 3300013102 Ga0157371_10037266 Ga0157371_100372662 306
227 3300015261 Ga0182006_1010250 Ga0182006_10102504 306
228 3300025228 Ga0209672_100195 Ga0209672_10019520 306
229 3300025229 Ga0209147_101700 Ga0209147_1017008 306
230 3300025242 Ga0209258_100069 Ga0209258_100069193 306
231 3300025254 Ga0209148_1000076 Ga0209148_100007662 306
232 3300028573 Ga0265334_10000022 Ga0265334_1000002280 306
233 3300031548 Ga0307408_100000066 Ga0307408_10000006623 306
234 3300031731 Ga0307405_10011847 Ga0307405_100118474 306
235 3300031911 Ga0307412_10000747 Ga0307412_1000074718 306
236 3300031911 Ga0307412_10001082 Ga0307412_1000108216 306
237 3300032002 Ga0307416_100398084 Ga0307416_1003980842 306
238 3300032004 Ga0307414_10069472 Ga0307414_100694723 306
239 3300032005 Ga0307411_10007411 Ga0307411_100074115 306
240 3300042116 Ga0450912_000130 Ga0450912_000130_472_1392 306
241 3300042129 Ga0450891_000308 Ga0450891_000308_1998_2918 306
242 3300049665 Ga0501227_020063 Ga0501227_020063_166_1086 306
243 3300049853 Ga0501226_001306 Ga0501226_001306_2030_2950 306

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

89

177

0.91

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

218

307

0.9

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

249

368

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5a3j-assembly8.cif.gz_H crystal structure of the chloroplastic gamma-ketol reductase from arabidopsis thaliana bound to 13-oxo-9(z),11(e),15(z)- octadecatrienoic acid. 0.9341 1 303
5a3j-assembly8.cif.gz_H crystal structure of the chloroplastic gamma-ketol reductase from arabidopsis thaliana bound to 13-oxo-9(z),11(e),15(z)- octadecatrienoic acid. 0.9222 1 303
2eih-assembly1.cif.gz_A crystal structure of nad-dependent alcohol dehydrogenase 0.917 1 305
4j6f-assembly1.cif.gz_B crystal structure of putative alcohol dehydrogenase from sinorhizobium meliloti 1021, nysgrc-target 012230 0.9151 1 305
3tqh-assembly1.cif.gz_A structure of the quinone oxidoreductase from coxiella burnetii 0.9149 1 305
ID Description Score Start End Superfamily
af_A0A0P0W924_2_174_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9665 15 136 3.90.180.10
af_Q3UNZ8_26_154_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9639 2 132 3.90.180.10
af_A0A0P0W8W7_12_109_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9595 18 114 3.90.180.10
af_B0BNC9_25_138_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9544 2 118 3.90.180.10
af_Q9LK96_31_155_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.948 2 122 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A0L8MXM1-F1-model_v4 deleted 0.9805 1 107
AF-A0A1Z4T6R5-F1-model_v4 deleted 0.9716 1 161
AF-A0A0L8MXM1-F1-model_v4 deleted 0.9713 1 107
AF-A0A6G8NSM8-F1-model_v4 L-threonine 3-dehydrogenase (EC 1.1.1.103) 0.9683 2 303 GO:0008270
GO:0008743
AF-A0A1S9XML4-F1-model_v4 deleted 0.9676 1 303

Feature Viewer

pLDDT pTM Quality
95.88 0.93 High
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Predicted Structure (AlphaFold2)

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