F354814

General Info

Members Datasets Scaffolds Average Seq Length
242 144 482 401

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10030342|Ga0307405_100303423
Length 474
Sequence VAHKCIALLLARSETSRPSCLPSIGNVIVVDDAGEEFSIMISDHLGGGAQAPPVDGEGIDDPSEGNAHEQLVDRDAQRVAGPDDWLAVVARTAAADANAPIELLGEYLSILADAALSGRRPEKRELESVRRLGRRAAEQGVDANQAVDLYLSAAWRLWQEIPTIVRSRDREKVRAAAEAVLRVINDAVEVLVEGHQAARRQMIRQEESARREFVDDLLRGDTDVSRLVERAEPFGLDLGRSHQVLLAAPVRSSASVDKAVVVMERAIVERFGDRDVLIASKDDLLVMLVPGELRDVVSDTDVTDPSGFARSRLRQSAQHDRWQVAAGRSYPGAYGIARSYEEAREGLLLARRLRLEDDVVQARDLLMFRVLGRDQAALVDLVHALLEPLTRSRGGAAPLLATLEAYFASGAVATETARRLHMSVRTVTYRLAKVKTLTGTDPADPAQRLALHMAVVGARLLDWPASDLPRQMLS

Samples

Sample ID Description Type Environment
1 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
75 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
92 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
93 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
94 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
95 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
96 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
97 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
98 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
99 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
100 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
101 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
102 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
103 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
104 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
105 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
106 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
107 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
108 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
109 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
110 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
111 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
112 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
113 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
114 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
115 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
116 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
121 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
124 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
125 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
140 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
141 2643221641 Nocardioides sp. Root122 Isolate Unclassified
142 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
143 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
144 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.69
Metatranscriptomes 1.24
Isolates 2.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.55
Rhizosphere 92.98
Stem 0
Stem Tuber 0
Unclassified 12.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307405_10030342 3300031731 Unclassified 3169
2 JGI24740J21852_10033316 3300001979 Unclassified 1637
3 Ga0070658_10000592 3300005327 Bacteria 31417
4 Ga0070658_10000872 3300005327 Bacteria 25795
5 Ga0070658_10015904 3300005327 Bacteria 6016
6 Ga0070683_100004549 3300005329 Bacteria 11445
7 Ga0070683_100023624 3300005329 Bacteria 5500
8 Ga0070683_100027081 3300005329 Bacteria 5168
9 Ga0070683_100198704 3300005329 Bacteria 1904
10 Ga0070683_100225056 3300005329 Bacteria 1783
11 Ga0068869_100222294 3300005334 Unclassified 1497
12 Ga0070680_100000007 3300005336 Bacteria 104173
13 Ga0070680_100004261 3300005336 Bacteria 10741
14 Ga0070680_100034029 3300005336 Bacteria 4109
15 Ga0070680_100114370 3300005336 Bacteria 2248
16 Ga0070682_100038237 3300005337 Bacteria 2942
17 Ga0070660_100016055 3300005339 Bacteria 5426
18 Ga0070660_100049606 3300005339 Unclassified 3227
19 Ga0070660_100050095 3300005339 Bacteria 3213
20 Ga0070660_100064294 3300005339 Bacteria 2854
21 Ga0070692_10053755 3300005345 Bacteria 2101
22 Ga0070659_100184938 3300005366 Unclassified 1711
23 Ga0070709_10138312 3300005434 Bacteria 1670
24 Ga0070713_100161184 3300005436 Bacteria 2002
25 Ga0070711_100229035 3300005439 Bacteria 1448
26 Ga0070708_100004087 3300005445 Bacteria 11467
27 Ga0070681_10000024 3300005458 Bacteria 111597
28 Ga0070681_10004875 3300005458 Bacteria 12873
29 Ga0070681_10179576 3300005458 Bacteria 2038
30 Ga0070681_10330389 3300005458 Unclassified 1434
31 Ga0070685_10073247 3300005466 Unclassified 2035
32 Ga0070706_100027316 3300005467 Bacteria 5253
33 Ga0070707_100040885 3300005468 Bacteria 4436
34 Ga0070698_100003208 3300005471 Bacteria 18015
35 Ga0070679_100000109 3300005530 Bacteria 65139
36 Ga0070679_100007693 3300005530 Bacteria 10089
37 Ga0070679_100008936 3300005530 Bacteria 9454
38 Ga0070679_100010858 3300005530 Bacteria 8652
39 Ga0070679_100019393 3300005530 Bacteria 6611
40 Ga0070679_100032845 3300005530 Bacteria 5136
41 Ga0070679_100049048 3300005530 Bacteria 4206
42 Ga0070679_100148966 3300005530 Bacteria 2317
43 Ga0070679_100202379 3300005530 Bacteria 1951
44 Ga0070684_100100387 3300005535 Bacteria 2584
45 Ga0070697_100145013 3300005536 Bacteria 1998
46 Ga0070686_100051103 3300005544 Bacteria 2630
47 Ga0070693_100120742 3300005547 Unclassified 1625
48 Ga0068855_100179318 3300005563 Unclassified 2396
49 Ga0068857_100009476 3300005577 Bacteria 8456
50 Ga0068856_100055084 3300005614 Bacteria 3925
51 Ga0068856_100164563 3300005614 Bacteria 2229
52 Ga0068852_100082682 3300005616 Bacteria 2854
53 Ga0068864_100013295 3300005618 Bacteria 6817
54 Ga0068860_100083660 3300005843 Bacteria 3035
55 Ga0081455_10007766 3300005937 Bacteria 11246
56 Ga0070717_10131865 3300006028 Unclassified 2149
57 Ga0097621_100063649 3300006237 Bacteria 3032
58 Ga0105240_10007908 3300009093 Bacteria 15338
59 Ga0105240_10122358 3300009093 Bacteria 3131
60 Ga0105245_10014279 3300009098 Bacteria 6921
61 Ga0105248_10056369 3300009177 Bacteria 4409
62 Ga0105249_10004475 3300009553 Bacteria 12082
63 Ga0105239_10006150 3300010375 Bacteria 13968
64 Ga0105239_10019589 3300010375 Bacteria 7469
65 Ga0157371_10116968 3300013102 Unclassified 1895
66 Ga0157370_10011555 3300013104 Bacteria 9218
67 Ga0157370_10083207 3300013104 Bacteria 3009
68 Ga0157369_10020097 3300013105 Bacteria 7469
69 Ga0157369_10189660 3300013105 Bacteria 2160
70 Ga0157374_10108151 3300013296 Bacteria 2672
71 Ga0157374_10235067 3300013296 Bacteria 1801
72 Ga0163162_10003510 3300013306 Bacteria 14992
73 Ga0157372_10007075 3300013307 Bacteria 11956
74 Ga0157372_10043584 3300013307 Bacteria 4968
75 Ga0157372_10102426 3300013307 Bacteria 3271
76 Ga0157375_10028450 3300013308 Bacteria 5239
77 Ga0163163_10016473 3300014325 Bacteria 6872
78 Ga0157379_10073867 3300014968 Bacteria 3053
79 Ga0197907_10063486 3300020069 Unclassified 2487
80 Ga0206353_10117150 3300020082 Bacteria 2210
81 Ga0206353_11688639 3300020082 Bacteria 4442
82 Ga0213875_10000304 3300021388 Bacteria 46946
83 Ga0207688_10074326 3300025901 Bacteria 1933
84 Ga0207647_10004137 3300025904 Bacteria 10767
85 Ga0207705_10000683 3300025909 Bacteria 28088
86 Ga0207705_10008432 3300025909 Bacteria 7524
87 Ga0207705_10061749 3300025909 Bacteria 2707
88 Ga0207705_10076211 3300025909 Unclassified 2438
89 Ga0207684_10004819 3300025910 Bacteria 12625
90 Ga0207707_10000059 3300025912 Bacteria 110997
91 Ga0207707_10001102 3300025912 Bacteria 25734
92 Ga0207707_10059836 3300025912 Unclassified 3314
93 Ga0207660_10000229 3300025917 Bacteria 36124
94 Ga0207660_10000630 3300025917 Bacteria 23689
95 Ga0207660_10013497 3300025917 Bacteria 5353
96 Ga0207660_10017623 3300025917 Unclassified 4748
97 Ga0207660_10024571 3300025917 Bacteria 4080
98 Ga0207660_10088369 3300025917 Bacteria 2292
99 Ga0207660_10115932 3300025917 Bacteria 2023
100 Ga0207657_10022599 3300025919 Bacteria 5879
101 Ga0207657_10073146 3300025919 Bacteria 2898
102 Ga0207657_10085943 3300025919 Unclassified 2634
103 Ga0207652_10000020 3300025921 Bacteria 159903
104 Ga0207652_10021419 3300025921 Bacteria 5335
105 Ga0207652_10081356 3300025921 Bacteria 2833
106 Ga0207652_10211551 3300025921 Unclassified 1746
107 Ga0207652_10314785 3300025921 Bacteria 1413
108 Ga0207646_10005874 3300025922 Bacteria 12819
109 Ga0207664_10005385 3300025929 Bacteria 8742
110 Ga0207690_10098010 3300025932 Bacteria 2087
111 Ga0207665_10013192 3300025939 Bacteria 5435
112 Ga0207689_10229834 3300025942 Unclassified 1533
113 Ga0207661_10008704 3300025944 Bacteria 7256
114 Ga0207661_10042875 3300025944 Bacteria 3569
115 Ga0207661_10054619 3300025944 Bacteria 3200
116 Ga0207661_10168352 3300025944 Unclassified 1906
117 Ga0207661_10346391 3300025944 Bacteria 1340
118 Ga0207658_10065469 3300025986 Bacteria 2730
119 Ga0207702_10056283 3300026078 Bacteria 3339
120 Ga0207676_10042810 3300026095 Bacteria 3483
121 Ga0207674_10008137 3300026116 Bacteria 12156
122 Ga0207683_10036083 3300026121 Bacteria 4302
123 Ga0268264_10037158 3300028381 Bacteria 4014
124 Ga0265336_10001401 3300028666 Bacteria 11125
125 Ga0265338_10001803 3300028800 Bacteria 33699
126 Ga0307408_100019857 3300031548 Unclassified 4526
127 Ga0307408_100020859 3300031548 Bacteria 4426
128 Ga0307405_10067845 3300031731 Bacteria 2280
129 Ga0307413_10015197 3300031824 Unclassified 3938
130 Ga0307413_10077379 3300031824 Bacteria 2118
131 Ga0307410_10017829 3300031852 Unclassified 4273
132 Ga0307410_10026621 3300031852 Bacteria 3644
133 Ga0307410_10245856 3300031852 Bacteria 1389
134 Ga0307406_10001446 3300031901 Bacteria 13126
135 Ga0307406_10007413 3300031901 Bacteria 6083
136 Ga0307406_10012094 3300031901 Unclassified 4911
137 Ga0307406_10020983 3300031901 Unclassified 3858
138 Ga0307407_10001589 3300031903 Bacteria 8372
139 Ga0307407_10008424 3300031903 Unclassified 4732
140 Ga0307407_10019379 3300031903 Bacteria 3464
141 Ga0307412_10016601 3300031911 Bacteria 4391
142 Ga0307412_10043028 3300031911 Bacteria 2939
143 Ga0307409_100003198 3300031995 Bacteria 8811
144 Ga0307409_100050815 3300031995 Bacteria 3169
145 Ga0307409_100054006 3300031995 Bacteria 3091
146 Ga0307409_100103281 3300031995 Bacteria 2370
147 Ga0307409_100144663 3300031995 Bacteria 2054
148 Ga0307409_100228813 3300031995 Bacteria 1684
149 Ga0307409_100245031 3300031995 Bacteria 1634
150 Ga0307409_100329094 3300031995 Bacteria 1433
151 Ga0307416_100000393 3300032002 Bacteria 22451
152 Ga0307416_100014563 3300032002 Bacteria 5396
153 Ga0307416_100017615 3300032002 Bacteria 5005
154 Ga0307416_100037220 3300032002 Bacteria 3741
155 Ga0307416_100362976 3300032002 Bacteria 1471
156 Ga0307414_10015445 3300032004 Unclassified 4609
157 Ga0307415_100000586 3300032126 Bacteria 15855
158 Ga0307415_100003777 3300032126 Bacteria 7762
159 Ga0307415_100006511 3300032126 Bacteria 6309
160 Ga0307415_100021266 3300032126 Unclassified 3983
161 Ga0373943_0067567 3300035170 Bacteria 1803
162 Ga0373937_0239480 3300036401 Bacteria 1709
163 Ga0373925_0001689 3300037068 Bacteria 18556
164 Ga0395900_0092639 3300037418 Bacteria 3105
165 Ga0395900_0144027 3300037418 Bacteria 2438
166 Ga0395900_0171186 3300037418 Unclassified 2211
167 Ga0395900_0252555 3300037418 Bacteria 1764
168 Ga0395898_0013801 3300037466 Bacteria 8304
169 Ga0395898_0023038 3300037466 Bacteria 6297
170 Ga0395898_0121931 3300037466 Bacteria 2498
171 Ga0436364_0653654 3300037853 Bacteria 62794
172 Ga0395901_0013403 3300038443 Bacteria 8331
173 Ga0395901_0094788 3300038443 Bacteria 3127
174 Ga0436365_0796601 3300039437 Bacteria 5712
175 Ga0451791_0169755 3300041451 Bacteria 10429
176 Ga0451793_0990025 3300041452 Bacteria 2936
177 Ga0451843_0214559 3300041509 Unclassified 2774
178 Ga0466965_0015812 3300044683 Bacteria 3585
179 Ga0466966_0040217 3300044684 Bacteria 3009
180 Ga0466961_0045656 3300044693 Bacteria 2803
181 Ga0466961_0108907 3300044693 Bacteria 1744
182 Ga0466963_0007136 3300044694 Bacteria 6658
183 Ga0466964_0009880 3300044706 Bacteria 3596
184 Ga0466971_0007444 3300044719 Bacteria 4769
185 Ga0466970_0029350 3300044765 Bacteria 2895
186 Ga0466970_0032283 3300044765 Bacteria 2766
187 Ga0466957_0009482 3300044842 Bacteria 5558
188 Ga0466960_0003826 3300044901 Bacteria 5835
189 Ga0466960_0025129 3300044901 Bacteria 2693
190 Ga0466960_0028156 3300044901 Bacteria 2570
191 Ga0466959_0048342 3300045049 Bacteria 3126
192 Ga0466959_0164444 3300045049 Bacteria 1559
193 Ga0466958_0000040 3300045836 Bacteria 37398
194 Ga0466967_0015815 3300045976 Bacteria 5928
195 Ga0466967_0030193 3300045976 Bacteria 4546
196 Ga0466967_0207165 3300045976 Bacteria 1859
197 Ga0495653_0002234 3300046463 Bacteria 15311
198 Ga0495664_0059321 3300046477 Bacteria 2277
199 Ga0495608_0000819 3300046511 Bacteria 21767
200 Ga0495618_0024378 3300046514 Bacteria 3747
201 Ga0495628_0032895 3300046516 Bacteria 4182
202 Ga0495630_0119849 3300046517 Bacteria 1996
203 Ga0495652_0007827 3300046529 Bacteria 9815
204 Ga0495652_0044070 3300046529 Bacteria 3843
205 Ga0495640_0024649 3300046533 Bacteria 4374
206 Ga0495640_0208756 3300046533 Bacteria 1235
207 Ga0495587_0000837 3300046536 Bacteria 20355
208 Ga0495645_0104590 3300046543 Bacteria 2010
209 Ga0495667_0002141 3300046559 Bacteria 13160
210 Ga0495635_0009709 3300046663 Bacteria 6726
211 Ga0495657_0004715 3300046675 Bacteria 10867
212 Ga0495599_0020760 3300046678 Bacteria 4092
213 Ga0495646_0021957 3300046680 Bacteria 4029
214 Ga0495600_0000808 3300046809 Bacteria 16623
215 Ga0495604_0007950 3300047317 Bacteria 8403
216 Ga0495674_0004339 3300047319 Bacteria 13635
217 Ga0495674_0007787 3300047319 Bacteria 10226
218 Ga0495680_0000454 3300047322 Bacteria 45871
219 Ga0495675_0039967 3300047444 Bacteria 2988
220 Ga0495684_0005615 3300047471 Bacteria 9778
221 Ga0496101_0086386 3300048904 Bacteria 2326
222 Ga0496102_0110930 3300048905 Bacteria 2557
223 Ga0496106_0093478 3300048909 Bacteria 2324
224 Ga0496108_0018882 3300048911 Bacteria 5653
225 Ga0496109_0009648 3300048912 Bacteria 8234
226 Ga0496110_0004063 3300048913 Bacteria 11294
227 Ga0496111_0118110 3300048914 Unclassified 1957
228 Ga0496112_0010315 3300048915 Bacteria 8472
229 Ga0496115_0017120 3300048918 Bacteria 5531
230 Ga0501047_0000037 3300049581 Bacteria 189750
231 Ga0501047_0142450 3300049581 Bacteria 2275
232 Ga0501070_0024043 3300049586 Bacteria 5109
233 Ga0501070_0136514 3300049586 Bacteria 2025
234 Ga0501075_0230912 3300049591 Bacteria 1411
235 Ga0495595_0019982 3300053084 Bacteria 2911
236 Ga0466962_0007205 3300061719 Bacteria 5327
237 2644230518 2643221641 Bacteria 4490190
238 2731906067 2731639228 Bacteria 4187555
239 2816507734 2816332139 Bacteria 9138787
240 8054472333 8054472261 Bacteria 7464355
241 8054478739 8054472261 Bacteria 7464355
242 Ga0307405_10030342
243 JGI24740J21852_10033316
244 Ga0070658_10000592
245 Ga0070658_10000872
246 Ga0070658_10015904
247 Ga0070683_100004549
248 Ga0070683_100023624
249 Ga0070683_100027081
250 Ga0070683_100198704
251 Ga0070683_100225056
252 Ga0068869_100222294
253 Ga0070680_100000007
254 Ga0070680_100004261
255 Ga0070680_100034029
256 Ga0070680_100114370
257 Ga0070682_100038237
258 Ga0070660_100016055
259 Ga0070660_100049606
260 Ga0070660_100050095
261 Ga0070660_100064294
262 Ga0070692_10053755
263 Ga0070659_100184938
264 Ga0070709_10138312
265 Ga0070713_100161184
266 Ga0070711_100229035
267 Ga0070708_100004087
268 Ga0070681_10000024
269 Ga0070681_10004875
270 Ga0070681_10179576
271 Ga0070681_10330389
272 Ga0070685_10073247
273 Ga0070706_100027316
274 Ga0070707_100040885
275 Ga0070698_100003208
276 Ga0070679_100000109
277 Ga0070679_100007693
278 Ga0070679_100008936
279 Ga0070679_100010858
280 Ga0070679_100019393
281 Ga0070679_100032845
282 Ga0070679_100049048
283 Ga0070679_100148966
284 Ga0070679_100202379
285 Ga0070684_100100387
286 Ga0070697_100145013
287 Ga0070686_100051103
288 Ga0070693_100120742
289 Ga0068855_100179318
290 Ga0068857_100009476
291 Ga0068856_100055084
292 Ga0068856_100164563
293 Ga0068852_100082682
294 Ga0068864_100013295
295 Ga0068860_100083660
296 Ga0081455_10007766
297 Ga0070717_10131865
298 Ga0097621_100063649
299 Ga0105240_10007908
300 Ga0105240_10122358
301 Ga0105245_10014279
302 Ga0105248_10056369
303 Ga0105249_10004475
304 Ga0105239_10006150
305 Ga0105239_10019589
306 Ga0157371_10116968
307 Ga0157370_10011555
308 Ga0157370_10083207
309 Ga0157369_10020097
310 Ga0157369_10189660
311 Ga0157374_10108151
312 Ga0157374_10235067
313 Ga0163162_10003510
314 Ga0157372_10007075
315 Ga0157372_10043584
316 Ga0157372_10102426
317 Ga0157375_10028450
318 Ga0163163_10016473
319 Ga0157379_10073867
320 Ga0197907_10063486
321 Ga0206353_10117150
322 Ga0206353_11688639
323 Ga0213875_10000304
324 Ga0207688_10074326
325 Ga0207647_10004137
326 Ga0207705_10000683
327 Ga0207705_10008432
328 Ga0207705_10061749
329 Ga0207705_10076211
330 Ga0207684_10004819
331 Ga0207707_10000059
332 Ga0207707_10001102
333 Ga0207707_10059836
334 Ga0207660_10000229
335 Ga0207660_10000630
336 Ga0207660_10013497
337 Ga0207660_10017623
338 Ga0207660_10024571
339 Ga0207660_10088369
340 Ga0207660_10115932
341 Ga0207657_10022599
342 Ga0207657_10073146
343 Ga0207657_10085943
344 Ga0207652_10000020
345 Ga0207652_10021419
346 Ga0207652_10081356
347 Ga0207652_10211551
348 Ga0207652_10314785
349 Ga0207646_10005874
350 Ga0207664_10005385
351 Ga0207690_10098010
352 Ga0207665_10013192
353 Ga0207689_10229834
354 Ga0207661_10008704
355 Ga0207661_10042875
356 Ga0207661_10054619
357 Ga0207661_10168352
358 Ga0207661_10346391
359 Ga0207658_10065469
360 Ga0207702_10056283
361 Ga0207676_10042810
362 Ga0207674_10008137
363 Ga0207683_10036083
364 Ga0268264_10037158
365 Ga0265336_10001401
366 Ga0265338_10001803
367 Ga0307408_100019857
368 Ga0307408_100020859
369 Ga0307405_10067845
370 Ga0307413_10015197
371 Ga0307413_10077379
372 Ga0307410_10017829
373 Ga0307410_10026621
374 Ga0307410_10245856
375 Ga0307406_10001446
376 Ga0307406_10007413
377 Ga0307406_10012094
378 Ga0307406_10020983
379 Ga0307407_10001589
380 Ga0307407_10008424
381 Ga0307407_10019379
382 Ga0307412_10016601
383 Ga0307412_10043028
384 Ga0307409_100003198
385 Ga0307409_100050815
386 Ga0307409_100054006
387 Ga0307409_100103281
388 Ga0307409_100144663
389 Ga0307409_100228813
390 Ga0307409_100245031
391 Ga0307409_100329094
392 Ga0307416_100000393
393 Ga0307416_100014563
394 Ga0307416_100017615
395 Ga0307416_100037220
396 Ga0307416_100362976
397 Ga0307414_10015445
398 Ga0307415_100000586
399 Ga0307415_100003777
400 Ga0307415_100006511
401 Ga0307415_100021266
402 Ga0373943_0067567
403 Ga0373937_0239480
404 Ga0373925_0001689
405 Ga0395900_0092639
406 Ga0395900_0144027
407 Ga0395900_0171186
408 Ga0395900_0252555
409 Ga0395898_0013801
410 Ga0395898_0023038
411 Ga0395898_0121931
412 Ga0436364_0653654
413 Ga0395901_0013403
414 Ga0395901_0094788
415 Ga0436365_0796601
416 Ga0451791_0169755
417 Ga0451793_0990025
418 Ga0451843_0214559
419 Ga0466965_0015812
420 Ga0466966_0040217
421 Ga0466961_0045656
422 Ga0466961_0108907
423 Ga0466963_0007136
424 Ga0466964_0009880
425 Ga0466971_0007444
426 Ga0466970_0029350
427 Ga0466970_0032283
428 Ga0466957_0009482
429 Ga0466960_0003826
430 Ga0466960_0025129
431 Ga0466960_0028156
432 Ga0466959_0048342
433 Ga0466959_0164444
434 Ga0466958_0000040
435 Ga0466967_0015815
436 Ga0466967_0030193
437 Ga0466967_0207165
438 Ga0495653_0002234
439 Ga0495664_0059321
440 Ga0495608_0000819
441 Ga0495618_0024378
442 Ga0495628_0032895
443 Ga0495630_0119849
444 Ga0495652_0007827
445 Ga0495652_0044070
446 Ga0495640_0024649
447 Ga0495640_0208756
448 Ga0495587_0000837
449 Ga0495645_0104590
450 Ga0495667_0002141
451 Ga0495635_0009709
452 Ga0495657_0004715
453 Ga0495599_0020760
454 Ga0495646_0021957
455 Ga0495600_0000808
456 Ga0495604_0007950
457 Ga0495674_0004339
458 Ga0495674_0007787
459 Ga0495680_0000454
460 Ga0495675_0039967
461 Ga0495684_0005615
462 Ga0496101_0086386
463 Ga0496102_0110930
464 Ga0496106_0093478
465 Ga0496108_0018882
466 Ga0496109_0009648
467 Ga0496110_0004063
468 Ga0496111_0118110
469 Ga0496112_0010315
470 Ga0496115_0017120
471 Ga0501047_0000037
472 Ga0501047_0142450
473 Ga0501070_0024043
474 Ga0501070_0136514
475 Ga0501075_0230912
476 Ga0495595_0019982
477 Ga0466962_0007205
478 2644230518
479 2731906067
480 2816507734
481 8054472333
482 8054478739

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13556

HTH_30

PucR C-terminal helix-turn-helix domain

399

456

0.98

PF17853

GGDEF_2

GGDEF-like domain

219

349

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2m8g-assembly1.cif.gz_X structure, function, and tethering of dna-binding domains in 54 transcriptional activators 0.9375 253 290
4l5e-assembly1.cif.gz_A-2 crystal structure of a. aeolicus ntrc1 dna binding domain 0.9213 257 289
4fth-assembly1.cif.gz_A crystal structure of ntrc4 dna-binding domain bound to double-stranded dna 0.883 258 291
4fth-assembly1.cif.gz_B crystal structure of ntrc4 dna-binding domain bound to double-stranded dna 0.8773 258 291
3vfz-assembly3.cif.gz_A crystal structure of -35 promoter binding domain of sigd of mycobacterium tuberculosis 0.8525 257 295
ID Description Score Start End Superfamily
2m8gX00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9375 253 290 1.10.10.60
4l5eA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9212 257 289 1.10.10.60
1ojlD03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8971 258 288 1.10.10.60
3e7lC00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8905 258 291 1.10.10.60
4fthA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.883 258 291 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A286EE14-F1-model_v4 PucR C-terminal helix-turn-helix domain-containing protein 0.9409 226 328
AF-A0A7W7PJ97-F1-model_v4 DNA-binding PucR family transcriptional regulator 0.9229 211 324 GO:0003677
AF-A0A3A5I9W9-F1-model_v4 PucR C-terminal helix-turn-helix domain-containing protein 0.9072 219 316
AF-G9PU62-F1-model_v4 deleted 0.9072 230 314
AF-A0A848DSE9-F1-model_v4 PucR family transcriptional regulator 0.9026 2 150

Map