F354793

General Info

Members Datasets Scaffolds Average Seq Length
242 189 484 184

Family's Representative Sequence

Representative Sequence 3300031507|Ga0307509_10020782|Ga0307509_100207824
Length 211
Sequence VARQFASVAEGPLRTERMSVGRTSVLNMTTLTERPNTALLLIDVQVGVVADAYERDAVVANIAGLVDRAREEGVQVIWVQHSDEEVPVGSEAWEYVPELHLRDGEPLVPKRYPDSFEDTSLEAVLAAAQVGRLVVAGASTDACIRSTLHGAFVRGYDVTLVGDAHTTSDLSKWGAPPPEQVIAHTNLYWKYHTGPGRTAGVETAKDVALGD

Samples

Sample ID Description Type Environment
1 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
75 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
76 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
77 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
78 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
79 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
83 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
84 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
85 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
86 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
87 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
93 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
94 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
95 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
96 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
97 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
98 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
99 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
100 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
101 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
102 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
103 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
104 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
105 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
111 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
112 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
113 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
114 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
115 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
116 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
117 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
121 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
124 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
125 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
126 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
127 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
128 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
129 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
133 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
134 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
135 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
136 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
137 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
140 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
141 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
142 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
147 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
148 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
164 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
165 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
166 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
170 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
171 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
172 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
173 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
174 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
175 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
176 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
177 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
178 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
179 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
180 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
181 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
182 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
183 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
184 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
185 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
186 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
187 2643221714 Streptomyces sp. Root264 Isolate Unclassified
188 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
189 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 96.69
Metatranscriptomes 1.24
Isolates 2.07

Biome Distribution

Category Percentage (%)
Aerial Root 0.41
Bulb 0
Endosphere 5.79
Nodule 0
Rhizoplane 8.26
Rhizosphere 77.27
Stem 0
Stem Tuber 0
Unclassified 0.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307509_10020782 3300031507 Bacteria 7445
2 Ga0070682_100057101 3300005337 Bacteria 2458
3 Ga0070682_100520735 3300005337 Bacteria 925
4 Ga0070668_100502288 3300005347 Bacteria 1050
5 Ga0070668_100605066 3300005347 Bacteria 959
6 Ga0070675_100274613 3300005354 Bacteria 1480
7 Ga0070713_100240278 3300005436 Bacteria 1649
8 Ga0070700_100681102 3300005441 Bacteria 815
9 Ga0070678_100027560 3300005456 Bacteria 3859
10 Ga0068867_100211741 3300005459 Bacteria 1557
11 Ga0070706_100003155 3300005467 Bacteria 16289
12 Ga0070707_100052231 3300005468 Bacteria 3918
13 Ga0070707_100340158 3300005468 Bacteria 1458
14 Ga0070698_100013129 3300005471 Bacteria 8765
15 Ga0070672_100411824 3300005543 Bacteria 1160
16 Ga0070686_100328327 3300005544 Bacteria 1143
17 Ga0070665_100662219 3300005548 Bacteria 1057
18 Ga0070664_100444278 3300005564 Bacteria 1190
19 Ga0068854_101268324 3300005578 Bacteria 662
20 Ga0068856_100400479 3300005614 Bacteria 1392
21 Ga0070702_100929826 3300005615 Bacteria 683
22 Ga0068861_100148470 3300005719 Bacteria 1921
23 Ga0081538_10003207 3300005981 Bacteria 15542
24 Ga0081538_10096100 3300005981 Bacteria 1511
25 Ga0081540_1005614 3300005983 Bacteria 9339
26 Ga0075364_10065066 3300006051 Bacteria 2393
27 Ga0075362_10310454 3300006177 Bacteria 784
28 Ga0097621_100124035 3300006237 Bacteria 2193
29 Ga0075370_10423222 3300006353 Bacteria 800
30 Ga0075428_100112156 3300006844 Bacteria 2970
31 Ga0075428_100564688 3300006844 Bacteria 1216
32 Ga0075430_100157379 3300006846 Bacteria 1891
33 Ga0075430_100547146 3300006846 Bacteria 955
34 Ga0075431_100435932 3300006847 Bacteria 1308
35 Ga0075431_101145060 3300006847 Bacteria 742
36 Ga0105245_10118938 3300009098 Bacteria 2466
37 Ga0105245_10897456 3300009098 Bacteria 928
38 Ga0105243_10456411 3300009148 Bacteria 1200
39 Ga0105242_10126271 3300009176 Bacteria 2202
40 Ga0105248_10084977 3300009177 Bacteria 3561
41 Ga0105238_10097273 3300009551 Bacteria 2929
42 Ga0105249_10695813 3300009553 Bacteria 1076
43 Ga0105249_11086976 3300009553 Bacteria 870
44 Ga0105239_10162381 3300010375 Bacteria 2497
45 Ga0105246_10883169 3300011119 Bacteria 800
46 Ga0157371_10153146 3300013102 Bacteria 1645
47 Ga0157369_10086006 3300013105 Bacteria 3359
48 Ga0157369_10096534 3300013105 Bacteria 3153
49 Ga0157374_10732446 3300013296 Bacteria 1003
50 Ga0163162_10039110 3300013306 Bacteria 4738
51 Ga0163162_10218910 3300013306 Bacteria 2034
52 Ga0157372_10048095 3300013307 Bacteria 4741
53 Ga0157372_11040872 3300013307 Bacteria 948
54 Ga0157375_10010992 3300013308 Bacteria 7983
55 Ga0157375_10091853 3300013308 Bacteria 3098
56 Ga0163163_11195612 3300014325 Bacteria 823
57 Ga0157380_10022439 3300014326 Bacteria 4752
58 Ga0157380_10706590 3300014326 Bacteria 1014
59 Ga0157377_10056975 3300014745 Bacteria 2221
60 Ga0157379_10529269 3300014968 Bacteria 1095
61 Ga0206350_10286125 3300020080 Unclassified 815
62 Ga0206354_10966065 3300020081 Bacteria 1842
63 Ga0206353_10214527 3300020082 Bacteria 4758
64 Ga0207642_10619432 3300025899 Bacteria 675
65 Ga0207688_10321095 3300025901 Bacteria 950
66 Ga0207684_10000341 3300025910 Bacteria 64955
67 Ga0207652_10081053 3300025921 Bacteria 2839
68 Ga0207646_10091390 3300025922 Bacteria 2724
69 Ga0207646_10355910 3300025922 Bacteria 1323
70 Ga0207650_10726800 3300025925 Bacteria 840
71 Ga0207664_10055377 3300025929 Bacteria 3147
72 Ga0207686_10093752 3300025934 Bacteria 1989
73 Ga0207686_10441855 3300025934 Bacteria 999
74 Ga0207709_10373498 3300025935 Bacteria 1083
75 Ga0207669_10072680 3300025937 Bacteria 2167
76 Ga0207691_10587607 3300025940 Bacteria 943
77 Ga0207711_10293755 3300025941 Bacteria 1498
78 Ga0207661_10052854 3300025944 Bacteria 3248
79 Ga0207679_10546767 3300025945 Bacteria 1039
80 Ga0207712_10040555 3300025961 Bacteria 3196
81 Ga0207712_10324811 3300025961 Bacteria 1271
82 Ga0207668_10719423 3300025972 Bacteria 879
83 Ga0207640_11131020 3300025981 Bacteria 694
84 Ga0207702_10467094 3300026078 Bacteria 1226
85 Ga0207648_10111166 3300026089 Bacteria 2405
86 Ga0207675_101029313 3300026118 Bacteria 842
87 Ga0207683_10083510 3300026121 Bacteria 2838
88 Ga0207698_10791051 3300026142 Bacteria 950
89 Ga0209974_10019107 3300027876 Bacteria 2272
90 Ga0268266_10458206 3300028379 Bacteria 1213
91 Ga0307517_10049741 3300028786 Bacteria 4280
92 Ga0307511_10000604 3300030521 Bacteria 38490
93 Ga0307513_10061838 3300031456 Bacteria 3961
94 Ga0307509_10028430 3300031507 Bacteria 6215
95 Ga0307508_10101076 3300031616 Bacteria 2479
96 Ga0307516_10019016 3300031730 Bacteria 7127
97 Ga0307518_10226571 3300031838 Bacteria 1214
98 Ga0307410_10007247 3300031852 Bacteria 6057
99 Ga0307409_100555771 3300031995 Bacteria 1127
100 Ga0307507_10006763 3300033179 Bacteria 17244
101 Ga0307507_10028935 3300033179 Bacteria 5889
102 Ga0307510_10015319 3300033180 Bacteria 9064
103 Ga0307510_10043807 3300033180 Bacteria 4858
104 Ga0373943_0032474 3300035170 Bacteria 2482
105 Ga0373935_0279862 3300035692 Bacteria 1174
106 Ga0373927_0091264 3300035695 Bacteria 1978
107 Ga0373947_0033574 3300035725 Bacteria 3030
108 Ga0395900_0109851 3300037418 Bacteria 2833
109 Ga0395898_0214217 3300037466 Bacteria 1837
110 Ga0395905_0571368 3300037471 Bacteria 1032
111 Ga0395905_0806429 3300037471 Bacteria 842
112 Ga0395901_0036829 3300038443 Bacteria 5058
113 Ga0436363_0045519 3300039450 Bacteria 767
114 Ga0436363_1338509 3300039450 Bacteria 838
115 Ga0436362_0802313 3300039453 Bacteria 657
116 Ga0451849_1262559 3300041505 Bacteria 668
117 Ga0451843_1498534 3300041509 Bacteria 711
118 Ga0451853_3079790 3300041512 Bacteria 1117
119 Ga0439463_068406 3300042016 Bacteria 909
120 Ga0439458_0124344 3300042157 Bacteria 681
121 Ga0466969_0145316 3300044656 Bacteria 1094
122 Ga0466965_0198292 3300044683 Bacteria 1064
123 Ga0466966_0032953 3300044684 Bacteria 3354
124 Ga0466966_0036373 3300044684 Bacteria 3179
125 Ga0466966_0039509 3300044684 Bacteria 3038
126 Ga0466961_0002240 3300044693 Bacteria 12028
127 Ga0466961_0026833 3300044693 Bacteria 3704
128 Ga0466961_0198883 3300044693 Bacteria 1240
129 Ga0466971_0010472 3300044719 Bacteria 4053
130 Ga0466957_0130978 3300044842 Bacteria 1607
131 Ga0466957_0213040 3300044842 Bacteria 1273
132 Ga0466960_0075659 3300044901 Bacteria 1685
133 Ga0466959_0030698 3300045049 Bacteria 3979
134 Ga0466959_0046732 3300045049 Bacteria 3185
135 Ga0466959_0052955 3300045049 Bacteria 2970
136 Ga0466959_0112273 3300045049 Bacteria 1944
137 Ga0466967_0481528 3300045976 Bacteria 1216
138 Ga0495592_0064951 3300046454 Bacteria 2673
139 Ga0495629_0005582 3300046459 Bacteria 9391
140 Ga0495629_0027178 3300046459 Bacteria 4064
141 Ga0495629_0177445 3300046459 Bacteria 1477
142 Ga0495638_0140051 3300046460 Bacteria 1413
143 Ga0495641_0020201 3300046461 Bacteria 3385
144 Ga0495641_0156883 3300046461 Bacteria 1018
145 Ga0495651_0019010 3300046462 Bacteria 5323
146 Ga0495653_0316255 3300046463 Bacteria 1013
147 Ga0495662_0022235 3300046476 Bacteria 3063
148 Ga0495664_0001892 3300046477 Bacteria 11132
149 Ga0495594_0006183 3300046499 Bacteria 6160
150 Ga0495618_0354694 3300046514 Bacteria 903
151 Ga0495630_0018421 3300046517 Bacteria 5129
152 Ga0495652_0094147 3300046529 Bacteria 2444
153 Ga0495640_0014819 3300046533 Bacteria 5885
154 Ga0495587_0285997 3300046536 Bacteria 923
155 Ga0495645_0287661 3300046543 Bacteria 1078
156 Ga0495667_0140280 3300046559 Bacteria 1558
157 Ga0495634_0195584 3300046642 Bacteria 1258
158 Ga0495625_0010185 3300046660 Bacteria 7803
159 Ga0495635_0016037 3300046663 Bacteria 5232
160 Ga0495588_0002568 3300046674 Bacteria 7764
161 Ga0495588_0337667 3300046674 Bacteria 792
162 Ga0495657_0202936 3300046675 Bacteria 1207
163 Ga0495657_0341213 3300046675 Bacteria 888
164 Ga0495646_0205296 3300046680 Bacteria 1071
165 Ga0495658_0424551 3300046683 Bacteria 848
166 Ga0495613_0002030 3300046689 Bacteria 15371
167 Ga0495613_0139050 3300046689 Bacteria 1736
168 Ga0495624_0149050 3300046690 Bacteria 1431
169 Ga0495624_0248415 3300046690 Bacteria 1076
170 Ga0495671_0012132 3300046692 Bacteria 4710
171 Ga0495671_0306711 3300046692 Bacteria 763
172 Ga0495600_0133986 3300046809 Bacteria 1609
173 Ga0495600_0251383 3300046809 Bacteria 1124
174 Ga0495581_0002502 3300047315 Bacteria 10425
175 Ga0495581_0378387 3300047315 Bacteria 826
176 Ga0495604_0001203 3300047317 Bacteria 21382
177 Ga0495636_0130560 3300047318 Bacteria 1117
178 Ga0495674_0234978 3300047319 Bacteria 1512
179 Ga0495676_0031528 3300047321 Bacteria 4480
180 Ga0495676_0082777 3300047321 Bacteria 2428
181 Ga0495680_0474314 3300047322 Bacteria 853
182 Ga0495687_007716 3300047443 Bacteria 6276
183 Ga0495681_0000474 3300047470 Bacteria 30767
184 Ga0495686_0018351 3300047472 Bacteria 4697
185 Ga0495686_0451888 3300047472 Bacteria 682
186 Ga0495593_0169896 3300047673 Bacteria 1099
187 Ga0495602_0274593 3300048088 Bacteria 1244
188 Ga0495614_0004685 3300048089 Bacteria 6166
189 Ga0495614_0014794 3300048089 Bacteria 3412
190 Ga0496100_0636145 3300048903 Bacteria 830
191 Ga0496101_0204996 3300048904 Bacteria 1526
192 Ga0496101_0481751 3300048904 Bacteria 980
193 Ga0496102_0094120 3300048905 Bacteria 2776
194 Ga0496104_0228646 3300048907 Bacteria 1772
195 Ga0496104_0323078 3300048907 Bacteria 1456
196 Ga0496104_0651305 3300048907 Bacteria 962
197 Ga0496106_0379389 3300048909 Bacteria 1136
198 Ga0496108_0016251 3300048911 Bacteria 6067
199 Ga0496108_0235639 3300048911 Bacteria 1592
200 Ga0496109_0005514 3300048912 Bacteria 10596
201 Ga0496110_0016690 3300048913 Bacteria 6133
202 Ga0496110_0959684 3300048913 Bacteria 762
203 Ga0496111_0008754 3300048914 Bacteria 6718
204 Ga0496112_0190190 3300048915 Bacteria 2015
205 Ga0496113_0030467 3300048916 Bacteria 3906
206 Ga0496113_0476980 3300048916 Bacteria 1002
207 Ga0496114_0034588 3300048917 Bacteria 4170
208 Ga0496114_0086863 3300048917 Bacteria 2651
209 Ga0496114_0134593 3300048917 Bacteria 2136
210 Ga0501034_0018324 3300049571 Bacteria 7183
211 Ga0501042_0351587 3300049578 Bacteria 1066
212 Ga0501046_0350096 3300049580 Bacteria 1073
213 Ga0501047_0061359 3300049581 Bacteria 3627
214 Ga0501067_0065803 3300049583 Bacteria 2007
215 Ga0501071_0221827 3300049587 Bacteria 1423
216 Ga0501077_0209162 3300049593 Bacteria 1240
217 Ga0501081_0285437 3300049743 Bacteria 1209
218 Ga0501044_0185564 3300049823 Bacteria 2045
219 nmdc:mga00v17_356617_c1 3300050491 Bacteria 951
220 nmdc:mga07m45_287129_c1 3300050496 Bacteria 957
221 nmdc:mga0qj67_347740_c1 3300050509 Bacteria 1199
222 nmdc:mga06r32_1053805_c1 3300050510 Bacteria 764
223 nmdc:mga06r32_128172_c1 3300050510 Bacteria 2508
224 Ga0495601_0226663 3300053077 Bacteria 1221
225 Ga0495595_0032387 3300053084 Bacteria 2355
226 Ga0495595_0043505 3300053084 Bacteria 2060
227 Ga0495619_0039011 3300053085 Bacteria 3100
228 Ga0500640_004047 3300053095 Bacteria 5265
229 Ga0500553_120339 3300053101 Bacteria 1083
230 Ga0500560_002427 3300053107 Bacteria 3556
231 Ga0500572_069715 3300053111 Bacteria 1084
232 Ga0500573_0330782 3300053140 Bacteria 748
233 Ga0500574_138503 3300053141 Bacteria 715
234 Ga0500616_0000692 3300053153 Bacteria 39433
235 Ga0500624_019871 3300053157 Bacteria 1071
236 Ga0500636_0279002 3300053177 Bacteria 835
237 Ga0466962_0005874 3300061719 Bacteria 5896
238 2585318752 2582581314 Bacteria 11452267
239 2644440618 2643221678 Bacteria 9540101
240 2644627780 2643221714 Bacteria 9015452
241 2808845715 2808606359 Bacteria 9866990
242 2984593310 2984592036 Bacteria 3670284
243 Ga0307509_10020782
244 Ga0070682_100057101
245 Ga0070682_100520735
246 Ga0070668_100502288
247 Ga0070668_100605066
248 Ga0070675_100274613
249 Ga0070713_100240278
250 Ga0070700_100681102
251 Ga0070678_100027560
252 Ga0068867_100211741
253 Ga0070706_100003155
254 Ga0070707_100052231
255 Ga0070707_100340158
256 Ga0070698_100013129
257 Ga0070672_100411824
258 Ga0070686_100328327
259 Ga0070665_100662219
260 Ga0070664_100444278
261 Ga0068854_101268324
262 Ga0068856_100400479
263 Ga0070702_100929826
264 Ga0068861_100148470
265 Ga0081538_10003207
266 Ga0081538_10096100
267 Ga0081540_1005614
268 Ga0075364_10065066
269 Ga0075362_10310454
270 Ga0097621_100124035
271 Ga0075370_10423222
272 Ga0075428_100112156
273 Ga0075428_100564688
274 Ga0075430_100157379
275 Ga0075430_100547146
276 Ga0075431_100435932
277 Ga0075431_101145060
278 Ga0105245_10118938
279 Ga0105245_10897456
280 Ga0105243_10456411
281 Ga0105242_10126271
282 Ga0105248_10084977
283 Ga0105238_10097273
284 Ga0105249_10695813
285 Ga0105249_11086976
286 Ga0105239_10162381
287 Ga0105246_10883169
288 Ga0157371_10153146
289 Ga0157369_10086006
290 Ga0157369_10096534
291 Ga0157374_10732446
292 Ga0163162_10039110
293 Ga0163162_10218910
294 Ga0157372_10048095
295 Ga0157372_11040872
296 Ga0157375_10010992
297 Ga0157375_10091853
298 Ga0163163_11195612
299 Ga0157380_10022439
300 Ga0157380_10706590
301 Ga0157377_10056975
302 Ga0157379_10529269
303 Ga0206350_10286125
304 Ga0206354_10966065
305 Ga0206353_10214527
306 Ga0207642_10619432
307 Ga0207688_10321095
308 Ga0207684_10000341
309 Ga0207652_10081053
310 Ga0207646_10091390
311 Ga0207646_10355910
312 Ga0207650_10726800
313 Ga0207664_10055377
314 Ga0207686_10093752
315 Ga0207686_10441855
316 Ga0207709_10373498
317 Ga0207669_10072680
318 Ga0207691_10587607
319 Ga0207711_10293755
320 Ga0207661_10052854
321 Ga0207679_10546767
322 Ga0207712_10040555
323 Ga0207712_10324811
324 Ga0207668_10719423
325 Ga0207640_11131020
326 Ga0207702_10467094
327 Ga0207648_10111166
328 Ga0207675_101029313
329 Ga0207683_10083510
330 Ga0207698_10791051
331 Ga0209974_10019107
332 Ga0268266_10458206
333 Ga0307517_10049741
334 Ga0307511_10000604
335 Ga0307513_10061838
336 Ga0307509_10028430
337 Ga0307508_10101076
338 Ga0307516_10019016
339 Ga0307518_10226571
340 Ga0307410_10007247
341 Ga0307409_100555771
342 Ga0307507_10006763
343 Ga0307507_10028935
344 Ga0307510_10015319
345 Ga0307510_10043807
346 Ga0373943_0032474
347 Ga0373935_0279862
348 Ga0373927_0091264
349 Ga0373947_0033574
350 Ga0395900_0109851
351 Ga0395898_0214217
352 Ga0395905_0571368
353 Ga0395905_0806429
354 Ga0395901_0036829
355 Ga0436363_0045519
356 Ga0436363_1338509
357 Ga0436362_0802313
358 Ga0451849_1262559
359 Ga0451843_1498534
360 Ga0451853_3079790
361 Ga0439463_068406
362 Ga0439458_0124344
363 Ga0466969_0145316
364 Ga0466965_0198292
365 Ga0466966_0032953
366 Ga0466966_0036373
367 Ga0466966_0039509
368 Ga0466961_0002240
369 Ga0466961_0026833
370 Ga0466961_0198883
371 Ga0466971_0010472
372 Ga0466957_0130978
373 Ga0466957_0213040
374 Ga0466960_0075659
375 Ga0466959_0030698
376 Ga0466959_0046732
377 Ga0466959_0052955
378 Ga0466959_0112273
379 Ga0466967_0481528
380 Ga0495592_0064951
381 Ga0495629_0005582
382 Ga0495629_0027178
383 Ga0495629_0177445
384 Ga0495638_0140051
385 Ga0495641_0020201
386 Ga0495641_0156883
387 Ga0495651_0019010
388 Ga0495653_0316255
389 Ga0495662_0022235
390 Ga0495664_0001892
391 Ga0495594_0006183
392 Ga0495618_0354694
393 Ga0495630_0018421
394 Ga0495652_0094147
395 Ga0495640_0014819
396 Ga0495587_0285997
397 Ga0495645_0287661
398 Ga0495667_0140280
399 Ga0495634_0195584
400 Ga0495625_0010185
401 Ga0495635_0016037
402 Ga0495588_0002568
403 Ga0495588_0337667
404 Ga0495657_0202936
405 Ga0495657_0341213
406 Ga0495646_0205296
407 Ga0495658_0424551
408 Ga0495613_0002030
409 Ga0495613_0139050
410 Ga0495624_0149050
411 Ga0495624_0248415
412 Ga0495671_0012132
413 Ga0495671_0306711
414 Ga0495600_0133986
415 Ga0495600_0251383
416 Ga0495581_0002502
417 Ga0495581_0378387
418 Ga0495604_0001203
419 Ga0495636_0130560
420 Ga0495674_0234978
421 Ga0495676_0031528
422 Ga0495676_0082777
423 Ga0495680_0474314
424 Ga0495687_007716
425 Ga0495681_0000474
426 Ga0495686_0018351
427 Ga0495686_0451888
428 Ga0495593_0169896
429 Ga0495602_0274593
430 Ga0495614_0004685
431 Ga0495614_0014794
432 Ga0496100_0636145
433 Ga0496101_0204996
434 Ga0496101_0481751
435 Ga0496102_0094120
436 Ga0496104_0228646
437 Ga0496104_0323078
438 Ga0496104_0651305
439 Ga0496106_0379389
440 Ga0496108_0016251
441 Ga0496108_0235639
442 Ga0496109_0005514
443 Ga0496110_0016690
444 Ga0496110_0959684
445 Ga0496111_0008754
446 Ga0496112_0190190
447 Ga0496113_0030467
448 Ga0496113_0476980
449 Ga0496114_0034588
450 Ga0496114_0086863
451 Ga0496114_0134593
452 Ga0501034_0018324
453 Ga0501042_0351587
454 Ga0501046_0350096
455 Ga0501047_0061359
456 Ga0501067_0065803
457 Ga0501071_0221827
458 Ga0501077_0209162
459 Ga0501081_0285437
460 Ga0501044_0185564
461 nmdc:mga00v17_356617_c1
462 nmdc:mga07m45_287129_c1
463 nmdc:mga0qj67_347740_c1
464 nmdc:mga06r32_1053805_c1
465 nmdc:mga06r32_128172_c1
466 Ga0495601_0226663
467 Ga0495595_0032387
468 Ga0495595_0043505
469 Ga0495619_0039011
470 Ga0500640_004047
471 Ga0500553_120339
472 Ga0500560_002427
473 Ga0500572_069715
474 Ga0500573_0330782
475 Ga0500574_138503
476 Ga0500616_0000692
477 Ga0500624_019871
478 Ga0500636_0279002
479 Ga0466962_0005874
480 2585318752
481 2644440618
482 2644627780
483 2808845715
484 2984593310

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00857

Isochorismatase

Isochorismatase family

37

175

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ha8-assembly1.cif.gz_A-2 structure of a cysteine hydrolase 0.9386 2 171
5hwg-assembly1.cif.gz_A structure of a cysteine hydrolase with a negative substrate 0.9383 2 171
5ha8-assembly1.cif.gz_A-2 structure of a cysteine hydrolase 0.9175 2 171
5hwg-assembly1.cif.gz_A structure of a cysteine hydrolase with a negative substrate 0.9172 2 171
4h17-assembly1.cif.gz_B crystal structure of an isochorismatase (pp1826) from pseudomonas putida kt2440 at 1.60 a resolution 0.8856 2 170
ID Description Score Start End Superfamily
3irvA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Isochorismatase-like 0.8828 2 168 3.40.50.850
2a67C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Isochorismatase-like 0.8765 2 165 3.40.50.850
af_B0G192_1_183_3.40.50.850 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Isochorismatase-like 0.8692 2 168 3.40.50.850
3irvA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Isochorismatase-like 0.8585 2 168 3.40.50.850
af_B0G192_1_183_3.40.50.850 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Isochorismatase-like 0.8451 2 168 3.40.50.850
ID Description Score Start End GO Terms
AF-A0A5C6JNC2-F1-model_v4 Isochorismatase family protein 0.9801 85 171
AF-A0A2H1KW59-F1-model_v4 Nicotinamidase-related amidase 0.9757 2 170 GO:0016787
AF-A0A0H5CZG2-F1-model_v4 Isochorismatase (EC 3.3.2.1) 0.9739 1 171 GO:0008908
AF-K0JTM8-F1-model_v4 Isochorismatase 0.9738 2 171 GO:0016787
AF-A0A2H1KAL9-F1-model_v4 Nicotinamidase-related amidase 0.9734 2 171 GO:0016787

Map