F354631

General Info

Members Datasets Scaffolds Average Seq Length
242 155 226 617

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10001530|Ga0105237_1000153023
Length 666
Sequence LKQIAETAASKTFSLFIATNQFYIKFETRLRMLFDGRPIIFLNKPGMRKSLFFTVGCLLVALGASAQMPALERVEPMFWWTGMSNPNVQLIVHGDHIASRNVQLSYPGVKLVAVHKVENPNYLFLDLRVFSAASPGTFPIKFIKAGEKTLTYQYALKKRDKSPGRAQGVTDKDLIYLIMPDRFSNGDPKNDSVKGMREMSVDRSKMFSRHGGDLKGVMNHLDYLKDLGVTAIWLTPPIENDEPSASYHGYAVTDHYKIDPRYGTNEQYKEFVEKCHKMGLKVVMDLVHNHAGTEGYTILDMPMKSWVHQWPKYTKSNFRYEADMDPYAAPSDRKQMLDGWFDHRMADMNENNPYLQNFLTQNHIWWVEYSGVDGFRLDTYPYNDPAYMAKWAQDVKAEFPRLSIFGETLQMTTANQVFFTEGRTVNQKLDTHLPGITDAVWKDAVYEALNGKEGWTDGVNRLYAVMAQDFMYKDVTRNAIFLDNHDMSRFLSMVNEDMTKYKSGLALLLTMRGVPQLYYGDEILMKNYSNPDGLVREDFPGGWPGDKDNKFSANGRSTKENEAFNYVKTLANYRKNTPALQTGKTMQYIPQEGVYVFFRYDNQKTVMIAYNGNEKEQSISTARYAERINGTLKARNVISDDTVELSKLTIPAKGTLVLELLPNNTH

Samples

Sample ID Description Type Environment
1 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2738541302 Pedobacter sp. CF074 Isolate Unclassified
4 2739367651 Pedobacter sp. OK291 Isolate Unclassified
5 2739367663 Pedobacter sp. YR510 Isolate Unclassified
6 2818991437 Pedobacter terrae 518 Isolate Unclassified
7 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
8 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
9 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
10 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
11 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
12 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
13 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
14 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
15 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
16 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
17 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
18 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
19 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
20 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
21 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
22 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
23 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
24 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
25 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
26 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
27 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
28 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
29 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
30 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
31 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
32 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
33 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
34 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
35 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
36 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
37 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
38 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
39 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
40 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
41 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
42 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
43 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
44 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
50 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
77 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
78 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
81 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
82 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
83 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
84 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
85 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
86 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
87 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
89 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
90 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
113 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
114 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
115 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
116 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
123 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
124 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
130 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
131 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
132 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
137 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
138 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
139 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
140 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
141 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
147 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
148 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
151 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
152 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
153 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
154 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
155 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.98
Metatranscriptomes 0
Isolates 7.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.16
Nodule 0
Rhizoplane 0
Rhizosphere 77.69
Stem 0
Stem Tuber 0
Unclassified 11.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10000008 3300002067 Bacteria 319819
2 JGI25162J39368_1000059 3300002737 Bacteria 138925
3 JGI25162J39368_1000823 3300002737 Bacteria 20446
4 JGI25152J39213_1000006 3300002773 Bacteria 158516
5 JGI25150J39212_1000005 3300002774 Bacteria 311800
6 JGI25151J46595_10000004 3300003187 Bacteria 494006
7 JGI25153J46596_10000004 3300003215 Bacteria 494006
8 rootH1_10004677 3300003316 Bacteria 7823
9 rootH1_10004677 3300003323 Bacteria 17185
10 rootH2_10008353 3300003320 Bacteria 41961
11 rootH2_10031162 3300003320 Bacteria 10378
12 rootH2_10045775 3300003320 Bacteria 12097
13 rootH1_10003476 3300003323 Bacteria 16026
14 rootH1_10046162 3300003323 Bacteria 20769
15 rootH1_10057258 3300003323 Bacteria 9795
16 rootH1_10066785 3300003323 Bacteria 4856
17 rootH1_10091465 3300003323 Bacteria 9887
18 Ga0055536_1000016 3300003781 Bacteria 222134
19 Ga0055531_10000191 3300003794 Bacteria 67877
20 Ga0065714_10004451 3300005288 Bacteria 7280
21 Ga0065714_10064640 3300005288 Bacteria 26501
22 Ga0070658_10000045 3300005327 Bacteria 130728
23 Ga0070658_10023956 3300005327 Bacteria 4897
24 Ga0070676_10007417 3300005328 Bacteria 5888
25 Ga0070680_100011776 3300005336 Bacteria 6784
26 Ga0068868_100016119 3300005338 Bacteria 5543
27 Ga0070660_100031575 3300005339 Bacteria 3979
28 Ga0070671_100002771 3300005355 Bacteria 13618
29 Ga0070673_100000911 3300005364 Bacteria 16687
30 Ga0070659_100008089 3300005366 Bacteria 7669
31 Ga0070659_100012549 3300005366 Bacteria 6281
32 Ga0070663_100001759 3300005455 Bacteria 12053
33 Ga0070662_100006349 3300005457 Bacteria 7616
34 Ga0070681_10037889 3300005458 Bacteria 4835
35 Ga0068867_100012653 3300005459 Bacteria 5967
36 Ga0070679_100006252 3300005530 Bacteria 11094
37 Ga0070684_100066623 3300005535 Bacteria 3161
38 Ga0068853_100012444 3300005539 Bacteria 6922
39 Ga0070665_100000034 3300005548 Bacteria 324289
40 Ga0068855_100000927 3300005563 Bacteria 36472
41 Ga0068855_100005512 3300005563 Bacteria 15446
42 Ga0068855_100008784 3300005563 Bacteria 12213
43 Ga0068855_100012758 3300005563 Bacteria 10134
44 Ga0068857_100006101 3300005577 Bacteria 10295
45 Ga0068856_100000275 3300005614 Bacteria 55981
46 Ga0068856_100003356 3300005614 Bacteria 16236
47 Ga0068852_100057790 3300005616 Bacteria 3357
48 Ga0068859_100013884 3300005617 Bacteria 8078
49 Ga0075366_10031021 3300006195 Bacteria 3145
50 Ga0075366_10046679 3300006195 Bacteria 2567
51 Ga0097621_100000182 3300006237 Bacteria 39957
52 Ga0097621_100028637 3300006237 Bacteria 4391
53 Ga0068871_100004255 3300006358 Bacteria 9923
54 Ga0068865_100004509 3300006881 Bacteria 8404
55 Ga0105244_10039691 3300009036 Bacteria 2449
56 Ga0105240_10000231 3300009093 Bacteria 110451
57 Ga0105240_10004401 3300009093 Bacteria 21482
58 Ga0105240_10007356 3300009093 Bacteria 16021
59 Ga0105240_10059486 3300009093 Bacteria 4768
60 Ga0105240_10086451 3300009093 Bacteria 3840
61 Ga0105243_10031142 3300009148 Bacteria 4111
62 Ga0105241_10003066 3300009174 Bacteria 12459
63 Ga0105241_10076332 3300009174 Bacteria 2613
64 Ga0105237_10000082 3300009545 Bacteria 127340
65 Ga0105237_10001530 3300009545 Bacteria 30283
66 Ga0105237_10002506 3300009545 Bacteria 22764
67 Ga0105237_10015424 3300009545 Bacteria 7953
68 Ga0105237_10016444 3300009545 Bacteria 7685
69 Ga0105238_10035328 3300009551 Bacteria 5082
70 Ga0105238_10065479 3300009551 Bacteria 3635
71 Ga0105239_10000059 3300010375 Bacteria 155685
72 Ga0105239_10003429 3300010375 Bacteria 19422
73 Ga0105239_10028451 3300010375 Bacteria 6147
74 Ga0105239_10173163 3300010375 Bacteria 2414
75 Ga0105246_10054700 3300011119 Bacteria 2752
76 Ga0157373_10000557 3300013100 Bacteria 29213
77 Ga0157373_10004445 3300013100 Bacteria 10555
78 Ga0157373_10004827 3300013100 Bacteria 10143
79 Ga0157371_10000027 3300013102 Bacteria 269243
80 Ga0157371_10000269 3300013102 Bacteria 70787
81 Ga0157371_10000805 3300013102 Bacteria 35999
82 Ga0157371_10021351 3300013102 Bacteria 4753
83 Ga0157370_10000442 3300013104 Bacteria 51866
84 Ga0157370_10000895 3300013104 Bacteria 37804
85 Ga0157370_10000961 3300013104 Bacteria 36550
86 Ga0157370_10006807 3300013104 Bacteria 12534
87 Ga0157370_10020770 3300013104 Bacteria 6553
88 Ga0157370_10030985 3300013104 Bacteria 5237
89 Ga0157369_10000169 3300013105 Bacteria 91977
90 Ga0157369_10001449 3300013105 Bacteria 29101
91 Ga0157374_10001036 3300013296 Bacteria 24103
92 Ga0157374_10001740 3300013296 Bacteria 18260
93 Ga0157374_10004922 3300013296 Bacteria 11210
94 Ga0157378_10004615 3300013297 Bacteria 12088
95 Ga0157378_10007812 3300013297 Bacteria 9338
96 Ga0157378_10034502 3300013297 Bacteria 4474
97 Ga0163162_10000116 3300013306 Bacteria 70911
98 Ga0163162_10000349 3300013306 Bacteria 42017
99 Ga0157372_10000109 3300013307 Bacteria 86749
100 Ga0157372_10000196 3300013307 Bacteria 66430
101 Ga0157372_10000808 3300013307 Bacteria 33956
102 Ga0157372_10012261 3300013307 Bacteria 9128
103 Ga0157372_10093625 3300013307 Bacteria 3420
104 Ga0157375_10023311 3300013308 Bacteria 5710
105 Ga0163163_10031671 3300014325 Bacteria 5105
106 Ga0157380_10078790 3300014326 Bacteria 2689
107 Ga0182008_10000840 3300014497 Bacteria 21424
108 Ga0157379_10039011 3300014968 Bacteria 4237
109 Ga0182006_1000346 3300015261 Bacteria 39502
110 Ga0182006_1000532 3300015261 Bacteria 28917
111 Ga0182007_10000016 3300015262 Bacteria 202375
112 Ga0183373_1012 3300015682 Bacteria 118834
113 Ga0163161_10000281 3300017792 Bacteria 44484
114 Ga0163161_10000768 3300017792 Bacteria 25285
115 Ga0163161_10005901 3300017792 Bacteria 8492
116 Ga0163161_10044386 3300017792 Bacteria 3201
117 Ga0163161_10084702 3300017792 Bacteria 2338
118 Ga0213872_10015252 3300021361 Bacteria 3576
119 Ga0207427_100519 3300025231 Bacteria 20335
120 Ga0209437_100010 3300025233 Bacteria 838447
121 Ga0207425_1000008 3300025245 Bacteria 618024
122 Ga0209026_1000494 3300025250 Bacteria 28903
123 Ga0209026_1004683 3300025250 Bacteria 3957
124 Ga0209129_1000040 3300025258 Bacteria 313043
125 Ga0209233_1000017 3300025261 Bacteria 898076
126 Ga0209676_1000106 3300025292 Bacteria 222576
127 Ga0209025_1000020 3300025294 Bacteria 618024
128 Ga0209758_1000022 3300025297 Bacteria 618024
129 Ga0209050_1000456 3300025298 Bacteria 73296
130 Ga0209050_1002642 3300025298 Bacteria 14691
131 Ga0209257_1000016 3300025304 Bacteria 908015
132 Ga0207647_10000149 3300025904 Bacteria 55611
133 Ga0207647_10000238 3300025904 Bacteria 45001
134 Ga0207647_10015417 3300025904 Bacteria 5240
135 Ga0207645_10000169 3300025907 Bacteria 51953
136 Ga0207705_10000080 3300025909 Bacteria 119562
137 Ga0207707_10007483 3300025912 Bacteria 9515
138 Ga0207695_10000117 3300025913 Bacteria 237982
139 Ga0207695_10009933 3300025913 Bacteria 11696
140 Ga0207695_10011839 3300025913 Bacteria 10523
141 Ga0207695_10022484 3300025913 Bacteria 7155
142 Ga0207671_10000494 3300025914 Bacteria 53548
143 Ga0207671_10001732 3300025914 Bacteria 24560
144 Ga0207671_10007346 3300025914 Bacteria 9567
145 Ga0207671_10079176 3300025914 Bacteria 2462
146 Ga0207657_10044591 3300025919 Bacteria 3897
147 Ga0207657_10064747 3300025919 Bacteria 3119
148 Ga0207694_10071603 3300025924 Bacteria 2709
149 Ga0207644_10006997 3300025931 Bacteria 7346
150 Ga0207690_10005186 3300025932 Bacteria 7685
151 Ga0207706_10000306 3300025933 Bacteria 53202
152 Ga0207709_10022477 3300025935 Bacteria 3577
153 Ga0207704_10000114 3300025938 Bacteria 44748
154 Ga0207667_10000015 3300025949 Bacteria 417534
155 Ga0207667_10017143 3300025949 Bacteria 8165
156 Ga0207667_10077733 3300025949 Bacteria 3441
157 Ga0207677_10007626 3300026023 Bacteria 6004
158 Ga0207639_10008648 3300026041 Bacteria 6986
159 Ga0207678_10006979 3300026067 Bacteria 10025
160 Ga0207702_10000420 3300026078 Bacteria 48565
161 Ga0207648_10000123 3300026089 Bacteria 76156
162 Ga0268266_10000111 3300028379 Bacteria 169743
163 Ga0307517_10005863 3300028786 Bacteria 18351
164 Ga0307515_10001800 3300028794 Bacteria 47827
165 Ga0307515_10005328 3300028794 Bacteria 26136
166 Ga0307515_10009352 3300028794 Bacteria 18961
167 Ga0307509_10049648 3300031507 Bacteria 4498
168 Ga0307408_100000659 3300031548 Bacteria 28794
169 Ga0307408_100002427 3300031548 Bacteria 13096
170 Ga0307408_100013859 3300031548 Bacteria 5352
171 Ga0307405_10000025 3300031731 Bacteria 123095
172 Ga0307407_10000016 3300031903 Bacteria 141499
173 Ga0307412_10003262 3300031911 Bacteria 9011
174 Ga0307409_100035775 3300031995 Bacteria 3642
175 Ga0307416_100000036 3300032002 Bacteria 141505
176 Ga0307416_100040261 3300032002 Bacteria 3628
177 Ga0307414_10004753 3300032004 Bacteria 7413
178 Ga0307507_10000034 3300033179 Bacteria 188697
179 Ga0307510_10000733 3300033180 Bacteria 33678
180 Ga0395899_0000017 3300037312 Bacteria 440179
181 Ga0395899_0000289 3300037312 Bacteria 64799
182 Ga0395899_0016747 3300037312 Bacteria 5589
183 Ga0395900_0000095 3300037418 Bacteria 164383
184 Ga0395900_0000370 3300037418 Bacteria 64745
185 Ga0395900_0061057 3300037418 Bacteria 3877
186 Ga0395898_0007663 3300037466 Bacteria 11463
187 Ga0395905_0000529 3300037471 Bacteria 52320
188 Ga0395905_0033603 3300037471 Bacteria 4817
189 Ga0395901_0000580 3300038443 Bacteria 42442
190 Ga0395901_0049792 3300038443 Bacteria 4354
191 Ga0395901_0094820 3300038443 Bacteria 3127
192 Ga0436361_0269064 3300039447 Bacteria 23413
193 Ga0439436_0006249 3300041404 Bacteria 3657
194 Ga0466972_0000061 3300044658 Bacteria 109075
195 Ga0453684_0049324 3300044712 Bacteria 5554
196 Ga0466957_0009509 3300044842 Bacteria 5551
197 Ga0466959_0074112 3300045049 Bacteria 2462
198 Ga0451576_0003835 3300045051 Bacteria 20207
199 Ga0495651_0107050 3300046462 Bacteria 2072
200 Ga0495585_0001550 3300046492 Bacteria 17823
201 Ga0495585_0056909 3300046492 Bacteria 2159
202 Ga0495606_0013884 3300046507 Bacteria 6323
203 Ga0495606_0017171 3300046507 Bacteria 5484
204 Ga0495606_0031525 3300046507 Bacteria 3684
205 Ga0495610_0000039 3300046512 Bacteria 166799
206 Ga0495610_0000103 3300046512 Bacteria 98502
207 Ga0495637_0006069 3300046520 Bacteria 6102
208 Ga0495644_0001604 3300046523 Bacteria 9217
209 Ga0495644_0019666 3300046523 Unclassified 2578
210 Ga0495648_0003548 3300046524 Bacteria 13649
211 Ga0495648_0011680 3300046524 Bacteria 6594
212 Ga0495609_0002021 3300046538 Bacteria 12817
213 Ga0495633_0000027 3300046558 Bacteria 204613
214 Ga0495668_0000010 3300046616 Bacteria 487308
215 Ga0495625_0000576 3300046660 Bacteria 53723
216 Ga0495625_0000715 3300046660 Bacteria 46840
217 Ga0495635_0068396 3300046663 Unclassified 2436
218 Ga0495687_002557 3300047443 Bacteria 14388
219 Ga0495686_0000113 3300047472 Bacteria 168307
220 Ga0501257_009724 3300049686 Unclassified 2175
221 nmdc:mga0k408_27311_c1 3300050493 Bacteria 3242
222 nmdc:mga0k408_44224_c1 3300050493 Bacteria 2567
223 Ga0500583_0000029 3300053092 Bacteria 107304
224 Ga0500618_000012 3300053125 Bacteria 185382
225 Ga0500642_0016964 3300053130 Bacteria 2780
226 Ga0500622_0003587 3300053156 Bacteria 10232

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049686 Ga0501257_009724 Ga0501257_009724_368_2119 555
2 3300037312 Ga0395899_0016747 Ga0395899_0016747_3872_5569 565
3 3300046663 Ga0495635_0068396 Ga0495635_0068396_161_1897 565
4 3300044842 Ga0466957_0009509 Ga0466957_0009509_967_2712 574
5 3300013104 Ga0157370_10006807 Ga0157370_100068072 578
6 3300003316 rootH1_10004677 rootH1_100046773 579
7 3300044658 Ga0466972_0000061 Ga0466972_0000061_48663_50477 584
8 3300031548 Ga0307408_100013859 Ga0307408_1000138593 585
9 3300037312 Ga0395899_0000289 Ga0395899_0000289_50148_51971 585
10 3300037418 Ga0395900_0000370 Ga0395900_0000370_38988_40811 585
11 3300037466 Ga0395898_0007663 Ga0395898_0007663_2447_4270 585
12 3300037471 Ga0395905_0000529 Ga0395905_0000529_11740_13563 585
13 3300038443 Ga0395901_0000580 Ga0395901_0000580_38758_40581 585
14 3300009093 Ga0105240_10059486 Ga0105240_100594862 586
15 3300009148 Ga0105243_10031142 Ga0105243_100311423 586
16 3300013296 Ga0157374_10001036 Ga0157374_1000103615 586
17 3300013296 Ga0157374_10001740 Ga0157374_1000174018 586
18 3300013307 Ga0157372_10093625 Ga0157372_100936253 586
19 3300013296 Ga0157374_10004922 Ga0157374_100049224 587
20 3300037418 Ga0395900_0000095 Ga0395900_0000095_42411_44174 587
21 3300013306 Ga0163162_10000116 Ga0163162_1000011637 588
22 3300009174 Ga0105241_10003066 Ga0105241_1000306613 589
23 3300010375 Ga0105239_10173163 Ga0105239_101731632 589
24 3300013297 Ga0157378_10004615 Ga0157378_1000461513 589
25 3300014326 Ga0157380_10078790 Ga0157380_100787902 595
26 3300011119 Ga0105246_10054700 Ga0105246_100547003 598
27 3300045051 Ga0451576_0003835 Ga0451576_0003835_408_2249 598
28 3300047443 Ga0495687_002557 Ga0495687_002557_12058_13884 598
29 3300005339 Ga0070660_100031575 Ga0070660_1000315752 599
30 3300005457 Ga0070662_100006349 Ga0070662_1000063495 599
31 3300025904 Ga0207647_10000238 Ga0207647_1000023831 599
32 3300025913 Ga0207695_10022484 Ga0207695_100224842 599
33 3300025919 Ga0207657_10044591 Ga0207657_100445913 599
34 3300025933 Ga0207706_10000306 Ga0207706_100003061 599
35 3300025935 Ga0207709_10022477 Ga0207709_100224772 599
36 3300053125 Ga0500618_000012 Ga0500618_000012_40073_41872 599
37 3300003323 rootH1_10091465 rootH1_100914654 602
38 3300005328 Ga0070676_10007417 Ga0070676_100074173 602
39 3300005338 Ga0068868_100016119 Ga0068868_1000161196 602
40 3300005364 Ga0070673_100000911 Ga0070673_10000091110 602
41 3300005459 Ga0068867_100012653 Ga0068867_1000126532 602
42 3300005539 Ga0068853_100012444 Ga0068853_1000124447 602
43 3300005548 Ga0070665_100000034 Ga0070665_100000034321 602
44 3300005563 Ga0068855_100008784 Ga0068855_1000087849 602
45 3300005616 Ga0068852_100057790 Ga0068852_1000577902 602
46 3300006237 Ga0097621_100000182 Ga0097621_10000018233 602
47 3300006358 Ga0068871_100004255 Ga0068871_1000042559 602
48 3300014325 Ga0163163_10031671 Ga0163163_100316714 602
49 3300025907 Ga0207645_10000169 Ga0207645_1000016916 602
50 3300025913 Ga0207695_10011839 Ga0207695_100118393 602
51 3300025914 Ga0207671_10079176 Ga0207671_100791761 602
52 3300025949 Ga0207667_10077733 Ga0207667_100777332 602
53 3300026023 Ga0207677_10007626 Ga0207677_100076266 602
54 3300026041 Ga0207639_10008648 Ga0207639_100086487 602
55 3300026089 Ga0207648_10000123 Ga0207648_1000012345 602
56 3300028379 Ga0268266_10000111 Ga0268266_10000111147 602
57 3300006881 Ga0068865_100004509 Ga0068865_1000045095 604
58 3300025938 Ga0207704_10000114 Ga0207704_1000011438 604
59 3300003794 Ga0055531_10000191 Ga0055531_1000019128 605
60 3300025298 Ga0209050_1002642 Ga0209050_10026425 605
61 3300025304 Ga0209257_1000016 Ga0209257_1000016760 605
62 iso_pu_bacteria 2738541278 2738730367 606
63 iso_pu_bacteria 2852623160 2852623988 606
64 iso_pu_bacteria 2884933994 2884937109 606
65 iso_pu_bacteria 2958458903 2958461003 606
66 3300009093 Ga0105240_10004401 Ga0105240_1000440110 607
67 3300039447 Ga0436361_0269064 Ga0436361_0269064_18784_20607 607
68 iso_pu_bacteria 2739367651 2739587327 607
69 iso_pu_bacteria 2945997725 2946002912 607
70 3300005288 Ga0065714_10004451 Ga0065714_100044515 608
71 3300005355 Ga0070671_100002771 Ga0070671_1000027712 608
72 3300005563 Ga0068855_100012758 Ga0068855_1000127586 608
73 3300006237 Ga0097621_100028637 Ga0097621_1000286373 608
74 3300013308 Ga0157375_10023311 Ga0157375_100233116 608
75 3300014968 Ga0157379_10039011 Ga0157379_100390113 608
76 3300017792 Ga0163161_10084702 Ga0163161_100847021 608
77 3300025250 Ga0209026_1004683 Ga0209026_10046832 608
78 3300025913 Ga0207695_10000117 Ga0207695_1000011762 608
79 3300025949 Ga0207667_10017143 Ga0207667_100171435 608
80 3300046507 Ga0495606_0017171 Ga0495606_0017171_862_2688 608
81 3300053092 Ga0500583_0000029 Ga0500583_0000029_69911_71788 608
82 3300003320 rootH2_10045775 rootH2_100457756 610
83 3300003323 rootH1_10046162 rootH1_100461622 610
84 3300005617 Ga0068859_100013884 Ga0068859_1000138844 610
85 3300009093 Ga0105240_10007356 Ga0105240_100073562 610
86 3300009174 Ga0105241_10076332 Ga0105241_100763321 610
87 3300009545 Ga0105237_10016444 Ga0105237_100164446 610
88 3300009551 Ga0105238_10065479 Ga0105238_100654792 610
89 3300010375 Ga0105239_10003429 Ga0105239_100034293 610
90 3300013104 Ga0157370_10000442 Ga0157370_1000044217 610
91 3300013104 Ga0157370_10000895 Ga0157370_100008951 610
92 3300025913 Ga0207695_10009933 Ga0207695_100099339 610
93 3300031911 Ga0307412_10003262 Ga0307412_100032625 610
94 3300032002 Ga0307416_100040261 Ga0307416_1000402612 610
95 3300002773 JGI25152J39213_1000006 JGI25152J39213_1000006128 611
96 3300002774 JGI25150J39212_1000005 JGI25150J39212_1000005106 611
97 3300003187 JGI25151J46595_10000004 JGI25151J46595_10000004274 611
98 3300003215 JGI25153J46596_10000004 JGI25153J46596_10000004274 611
99 3300009545 Ga0105237_10000082 Ga0105237_1000008262 611
100 3300009545 Ga0105237_10002506 Ga0105237_100025067 611
101 3300009551 Ga0105238_10035328 Ga0105238_100353283 611
102 3300013100 Ga0157373_10004827 Ga0157373_100048274 611
103 3300017792 Ga0163161_10000768 Ga0163161_1000076810 611
104 3300017792 Ga0163161_10044386 Ga0163161_100443862 611
105 3300025245 Ga0207425_1000008 Ga0207425_1000008163 611
106 3300025258 Ga0209129_1000040 Ga0209129_1000040102 611
107 3300025294 Ga0209025_1000020 Ga0209025_1000020163 611
108 3300025297 Ga0209758_1000022 Ga0209758_1000022163 611
109 3300025914 Ga0207671_10000494 Ga0207671_1000049433 611
110 3300025914 Ga0207671_10001732 Ga0207671_100017324 611
111 3300025924 Ga0207694_10071603 Ga0207694_100716032 611
112 3300028794 Ga0307515_10001800 Ga0307515_1000180021 611
113 3300046523 Ga0495644_0019666 Ga0495644_0019666_380_2236 611
114 3300013102 Ga0157371_10021351 Ga0157371_100213511 612
115 3300005563 Ga0068855_100005512 Ga0068855_1000055126 613
116 3300041404 Ga0439436_0006249 Ga0439436_0006249_1332_3248 613
117 3300013297 Ga0157378_10034502 Ga0157378_100345023 614
118 3300005366 Ga0070659_100012549 Ga0070659_1000125493 615
119 3300005535 Ga0070684_100066623 Ga0070684_1000666232 615
120 3300005577 Ga0068857_100006101 Ga0068857_10000610110 615
121 3300013100 Ga0157373_10000557 Ga0157373_100005572 615
122 3300013100 Ga0157373_10004445 Ga0157373_100044456 615
123 3300013102 Ga0157371_10000269 Ga0157371_1000026949 615
124 3300013307 Ga0157372_10000196 Ga0157372_1000019659 615
125 3300013307 Ga0157372_10000808 Ga0157372_1000080829 615
126 3300025904 Ga0207647_10000149 Ga0207647_1000014912 615
127 3300031548 Ga0307408_100002427 Ga0307408_1000024272 615
128 3300038443 Ga0395901_0094820 Ga0395901_0094820_697_2550 615
129 3300003320 rootH2_10031162 rootH2_100311624 616
130 3300005327 Ga0070658_10023956 Ga0070658_100239563 616
131 3300005336 Ga0070680_100011776 Ga0070680_1000117762 616
132 3300005455 Ga0070663_100001759 Ga0070663_1000017595 616
133 3300005458 Ga0070681_10037889 Ga0070681_100378894 616
134 3300005530 Ga0070679_100006252 Ga0070679_10000625210 616
135 3300005563 Ga0068855_100000927 Ga0068855_1000009277 616
136 3300005614 Ga0068856_100000275 Ga0068856_10000027523 616
137 3300006195 Ga0075366_10046679 Ga0075366_100466792 616
138 3300009093 Ga0105240_10000231 Ga0105240_1000023139 616
139 3300013102 Ga0157371_10000805 Ga0157371_1000080524 616
140 3300013105 Ga0157369_10001449 Ga0157369_1000144912 616
141 3300013307 Ga0157372_10000109 Ga0157372_1000010960 616
142 3300025250 Ga0209026_1000494 Ga0209026_100049418 616
143 3300025912 Ga0207707_10007483 Ga0207707_100074831 616
144 3300025949 Ga0207667_10000015 Ga0207667_10000015194 616
145 3300026067 Ga0207678_10006979 Ga0207678_100069795 616
146 3300026078 Ga0207702_10000420 Ga0207702_1000042022 616
147 3300031548 Ga0307408_100000659 Ga0307408_10000065921 616
148 3300037312 Ga0395899_0000017 Ga0395899_0000017_397217_399076 616
149 3300045049 Ga0466959_0074112 Ga0466959_0074112_266_2122 616
150 3300050493 nmdc:mga0k408_44224_c1 nmdc:mga0k408_44224_c1_372_2225 616
151 iso_pu_bacteria 2928078545 2928083596 616
152 3300009093 Ga0105240_10086451 Ga0105240_100864512 617
153 3300031507 Ga0307509_10049648 Ga0307509_100496483 617
154 3300046462 Ga0495651_0107050 Ga0495651_0107050_101_1954 617
155 3300002737 JGI25162J39368_1000059 JGI25162J39368_10000594 618
156 3300002737 JGI25162J39368_1000823 JGI25162J39368_10008234 618
157 3300003323 rootH1_10003476 rootH1_100034767 618
158 3300005366 Ga0070659_100008089 Ga0070659_1000080892 618
159 3300009545 Ga0105237_10015424 Ga0105237_100154247 618
160 3300010375 Ga0105239_10028451 Ga0105239_100284512 618
161 3300025231 Ga0207427_100519 Ga0207427_10051912 618
162 3300025233 Ga0209437_100010 Ga0209437_100010105 618
163 3300025261 Ga0209233_1000017 Ga0209233_1000017118 618
164 3300025919 Ga0207657_10064747 Ga0207657_100647472 618
165 3300025932 Ga0207690_10005186 Ga0207690_100051864 618
166 3300046512 Ga0495610_0000103 Ga0495610_0000103_23234_25174 618
167 3300046520 Ga0495637_0006069 Ga0495637_0006069_3648_5588 618
168 3300046507 Ga0495606_0013884 Ga0495606_0013884_599_2545 619
169 3300003320 rootH2_10008353 rootH2_1000835316 620
170 3300005327 Ga0070658_10000045 Ga0070658_1000004541 620
171 3300005614 Ga0068856_100003356 Ga0068856_10000335615 620
172 3300013297 Ga0157378_10007812 Ga0157378_100078123 620
173 3300013307 Ga0157372_10012261 Ga0157372_100122614 620
174 3300021361 Ga0213872_10015252 Ga0213872_100152522 620
175 3300025904 Ga0207647_10015417 Ga0207647_100154173 620
176 3300025909 Ga0207705_10000080 Ga0207705_1000008086 620
177 3300025931 Ga0207644_10006997 Ga0207644_100069975 620
178 3300028786 Ga0307517_10005863 Ga0307517_1000586310 620
179 3300028794 Ga0307515_10005328 Ga0307515_1000532818 620
180 3300028794 Ga0307515_10009352 Ga0307515_100093529 620
181 3300033179 Ga0307507_10000034 Ga0307507_10000034155 620
182 3300044712 Ga0453684_0049324 Ga0453684_0049324_508_2418 620
183 3300046492 Ga0495585_0001550 Ga0495585_0001550_14469_16331 620
184 3300046492 Ga0495585_0056909 Ga0495585_0056909_94_1956 620
185 3300046507 Ga0495606_0031525 Ga0495606_0031525_975_2837 620
186 3300046523 Ga0495644_0001604 Ga0495644_0001604_6726_8588 620
187 3300046524 Ga0495648_0003548 Ga0495648_0003548_11449_13311 620
188 3300046524 Ga0495648_0011680 Ga0495648_0011680_4663_6525 620
189 3300046538 Ga0495609_0002021 Ga0495609_0002021_3059_4921 620
190 3300046558 Ga0495633_0000027 Ga0495633_0000027_26188_28050 620
191 3300046616 Ga0495668_0000010 Ga0495668_0000010_209125_210987 620
192 3300046660 Ga0495625_0000576 Ga0495625_0000576_34399_36261 620
193 3300046660 Ga0495625_0000715 Ga0495625_0000715_7685_9547 620
194 3300047472 Ga0495686_0000113 Ga0495686_0000113_298_2160 620
195 3300050493 nmdc:mga0k408_27311_c1 nmdc:mga0k408_27311_c1_710_2572 620
196 3300010375 Ga0105239_10000059 Ga0105239_1000005958 621
197 3300013102 Ga0157371_10000027 Ga0157371_10000027224 621
198 3300017792 Ga0163161_10005901 Ga0163161_100059014 621
199 3300031731 Ga0307405_10000025 Ga0307405_1000002566 621
200 iso_pu_bacteria 2585427687 2586210210 621
201 iso_pu_bacteria 2842909656 2842911615 621
202 3300053156 Ga0500622_0003587 Ga0500622_0003587_661_2541 622
203 3300009036 Ga0105244_10039691 Ga0105244_100396913 623
204 iso_pu_bacteria 2739367663 2739647947 623
205 3300003323 rootH1_10066785 rootH1_100667853 624
206 iso_pu_bacteria 2857627736 2857630441 626
207 iso_pu_bacteria 2904445276 2904449828 626
208 iso_pu_bacteria 2738541302 2738854231 627
209 iso_pu_bacteria 2818991437 2819550191 627
210 iso_pu_bacteria 2849281842 2849285154 627
211 iso_pu_bacteria 2954016120 2954019777 627
212 iso_pu_bacteria 2842722452 2842726774 628
213 3300013104 Ga0157370_10000961 Ga0157370_100009616 629
214 3300013104 Ga0157370_10030985 Ga0157370_100309853 629
215 3300013306 Ga0163162_10000349 Ga0163162_100003498 629
216 3300014497 Ga0182008_10000840 Ga0182008_100008409 629
217 3300015261 Ga0182006_1000532 Ga0182006_10005328 629
218 3300015682 Ga0183373_1012 Ga0183373_101223 629
219 3300003323 rootH1_10057258 rootH1_100572582 630
220 3300005288 Ga0065714_10064640 Ga0065714_1006464014 630
221 3300006195 Ga0075366_10031021 Ga0075366_100310212 630
222 3300013105 Ga0157369_10000169 Ga0157369_1000016926 630
223 3300015261 Ga0182006_1000346 Ga0182006_100034618 630
224 3300015262 Ga0182007_10000016 Ga0182007_100000168 630
225 3300017792 Ga0163161_10000281 Ga0163161_100002814 630
226 3300046512 Ga0495610_0000039 Ga0495610_0000039_139819_141750 630
227 3300003781 Ga0055536_1000016 Ga0055536_100001634 631
228 3300013104 Ga0157370_10020770 Ga0157370_100207703 631
229 3300025292 Ga0209676_1000106 Ga0209676_1000106170 631
230 3300025298 Ga0209050_1000456 Ga0209050_100045634 631
231 3300031903 Ga0307407_10000016 Ga0307407_1000001638 631
232 3300031995 Ga0307409_100035775 Ga0307409_1000357753 631
233 3300032002 Ga0307416_100000036 Ga0307416_10000003638 631
234 3300032004 Ga0307414_10004753 Ga0307414_100047533 631
235 3300009545 Ga0105237_10001530 Ga0105237_1000153023 634
236 3300025914 Ga0207671_10007346 Ga0207671_100073468 634
237 3300033180 Ga0307510_10000733 Ga0307510_100007338 634
238 3300037418 Ga0395900_0061057 Ga0395900_0061057_1445_3358 634
239 3300037471 Ga0395905_0033603 Ga0395905_0033603_210_2123 634
240 3300038443 Ga0395901_0049792 Ga0395901_0049792_1162_3075 634
241 3300053130 Ga0500642_0016964 Ga0500642_0016964_49_1974 634
242 3300002067 JGI24735J21928_10000008 JGI24735J21928_1000000869 640

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09087

Cyc-maltodext_N

Cyclomaltodextrinase, N-terminal

73

160

0.99

PF10438

Cyc-maltodext_C

Cyclo-malto-dextrinase C-terminal domain

585

659

0.98

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

212

532

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
3edf-assembly1.cif.gz_B structural base for cyclodextrin hydrolysis 0.9596 44 638
3edd-assembly1.cif.gz_A structural base for cyclodextrin hydrolysis 0.9585 43 638
3ede-assembly1.cif.gz_B structural base for cyclodextrin hydrolysis 0.9583 44 638
1h3g-assembly2.cif.gz_B cyclomaltodextrinase from flavobacterium sp. no. 92: from dna sequence to protein structure 0.954 44 638
3edd-assembly1.cif.gz_A structural base for cyclodextrin hydrolysis 0.9538 43 638
ID Description Score Start End Superfamily
1h3gB01 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9617 44 130 2.60.40.10
3edeA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9602 139 557 3.20.20.80
3edeA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.958 139 557 3.20.20.80
1h3gB01 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9078 44 130 2.60.40.10
4aeeB03 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8909 145 557 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A4V1UFR9-F1-model_v4 deleted 0.9897 102 469
AF-A0A2R7L101-F1-model_v4 Alpha-amylase 0.9893 45 635 GO:0005975
GO:0016798
AF-A0A0D3LNM7-F1-model_v4 Alpha amylase 0.9884 57 638 GO:0005975
GO:0016798
AF-A0A7M1T3L8-F1-model_v4 Glycoside hydrolase family 13 protein 0.9861 44 635 GO:0005975
GO:0016798
AF-A0A1G7BKG1-F1-model_v4 Glycosidase 0.9859 35 640 GO:0005975
GO:0016798

Feature Viewer

pLDDT pTM Quality
90.23 0.89 High
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Predicted Structure (AlphaFold2)

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