F354455

General Info

Members Datasets Scaffolds Average Seq Length
242 145 242 282

Family's Representative Sequence

Representative Sequence 3300005459|Ga0068867_100362109|Ga0068867_1003621092
Length 328
Sequence MIGHRRKSCARHGWPSQPLERLMRPCSAMRFTSTRSLLAAVLSALALGAPSPAEAQPAPPARVLRVCADPNNLPFSNERREGFENRIAELVAREMRAELRYVWWAQRRGYIRNTLRAGLCDLFIGMPTGLDMVLVTRPYYRSTYAFVTKRSGPRITSFDDPKLKRLRVGVQIIGDDFANAPPAEALTHRGIVKNVRGYSVLGDYREPNPPSRIVRAVANGEIDVAVVWGPLAGYFARRSTVPLRVVPVSPEVDVPYLPFVFDIAMGVRRGETVLRDTLDAVIVRRQHDIDRILADYGIPRADTPAMVGSVHRGGDRSTGSTDGTSATR

Samples

Sample ID Description Type Environment
1 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
45 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
86 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
93 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
94 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
95 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
96 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
97 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
98 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
99 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
104 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
133 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0.41
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.24
Nodule 0
Rhizoplane 3.72
Rhizosphere 94.63
Stem 0
Stem Tuber 0
Unclassified 0.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000320 3300003214 Bacteria 57832
2 Ga0070658_10000062 3300005327 Bacteria 107844
3 Ga0070658_10003874 3300005327 Bacteria 12266
4 Ga0070658_10012414 3300005327 Bacteria 6835
5 Ga0070658_10097652 3300005327 Unclassified 2425
6 Ga0070683_100099504 3300005329 Bacteria 2737
7 Ga0070683_100105972 3300005329 Unclassified 2650
8 Ga0070683_100754740 3300005329 Bacteria 932
9 Ga0070690_100179818 3300005330 Bacteria 1461
10 Ga0070670_100378106 3300005331 Unclassified 1247
11 Ga0070677_10026140 3300005333 Bacteria 2186
12 Ga0070680_100111604 3300005336 Bacteria 2276
13 Ga0070680_100357207 3300005336 Unclassified 1243
14 Ga0070680_100482927 3300005336 Unclassified 1059
15 Ga0068868_100000239 3300005338 Bacteria 37122
16 Ga0070660_100000383 3300005339 Bacteria 29464
17 Ga0070660_100333325 3300005339 Unclassified 1248
18 Ga0070689_100144116 3300005340 Bacteria 1918
19 Ga0070661_100108847 3300005344 Bacteria 2068
20 Ga0070661_100113753 3300005344 Bacteria 2022
21 Ga0070675_100168642 3300005354 Bacteria 1887
22 Ga0070675_100241827 3300005354 Bacteria 1577
23 Ga0070675_100408747 3300005354 Bacteria 1212
24 Ga0070671_100053861 3300005355 Bacteria 3344
25 Ga0070671_100150735 3300005355 Bacteria 1963
26 Ga0070674_100221486 3300005356 Bacteria 1472
27 Ga0070688_100112067 3300005365 Bacteria 1816
28 Ga0070659_100036026 3300005366 Bacteria 3856
29 Ga0070659_100066718 3300005366 Bacteria 2852
30 Ga0070678_100324023 3300005456 Bacteria 1317
31 Ga0070678_100390802 3300005456 Bacteria 1206
32 Ga0070662_100079766 3300005457 Bacteria 2435
33 Ga0070662_100089246 3300005457 Bacteria 2312
34 Ga0070681_10068524 3300005458 Bacteria 3514
35 Ga0070681_10232449 3300005458 Bacteria 1758
36 Ga0068867_100362109 3300005459 Bacteria 1213
37 Ga0070685_10054401 3300005466 Bacteria 2322
38 Ga0070679_100051564 3300005530 Bacteria 4098
39 Ga0070679_100105029 3300005530 Bacteria 2811
40 Ga0070679_100232996 3300005530 Bacteria 1801
41 Ga0070679_100289007 3300005530 Bacteria 1591
42 Ga0070679_100314004 3300005530 Bacteria 1517
43 Ga0070684_100145567 3300005535 Bacteria 2144
44 Ga0068853_100576338 3300005539 Bacteria 1067
45 Ga0068853_100589093 3300005539 Unclassified 1055
46 Ga0070672_100188428 3300005543 Bacteria 1721
47 Ga0070672_100231677 3300005543 Bacteria 1552
48 Ga0070665_100000752 3300005548 Bacteria 43043
49 Ga0068855_100195816 3300005563 Unclassified 2277
50 Ga0070664_100009664 3300005564 Bacteria 7825
51 Ga0070664_100070964 3300005564 Bacteria 2984
52 Ga0070664_100097083 3300005564 Bacteria 2558
53 Ga0068857_100075615 3300005577 Bacteria 3003
54 Ga0068854_100065544 3300005578 Bacteria 2641
55 Ga0068852_100029126 3300005616 Bacteria 4531
56 Ga0068852_100096930 3300005616 Bacteria 2652
57 Ga0068852_100152730 3300005616 Bacteria 2149
58 Ga0068852_100152815 3300005616 Bacteria 2148
59 Ga0068852_100214661 3300005616 Bacteria 1827
60 Ga0068864_100144428 3300005618 Bacteria 2150
61 Ga0081538_10038610 3300005981 Bacteria 3077
62 Ga0075435_100000837 3300007076 Bacteria 19192
63 Ga0075435_100063003 3300007076 Bacteria 3011
64 Ga0111539_10221526 3300009094 Bacteria 2203
65 Ga0105241_10000020 3300009174 Bacteria 147039
66 Ga0105239_11136662 3300010375 Unclassified 899
67 Ga0157373_10078028 3300013100 Bacteria 2336
68 Ga0157369_10020803 3300013105 Bacteria 7333
69 Ga0157372_10061190 3300013307 Bacteria 4215
70 Ga0157372_10116150 3300013307 Unclassified 3068
71 Ga0157380_10058952 3300014326 Bacteria 3062
72 Ga0206356_11094901 3300020070 Bacteria 2951
73 Ga0207427_100574 3300025231 Bacteria 18543
74 Ga0209233_1000278 3300025261 Bacteria 71989
75 Ga0207656_10013963 3300025321 Bacteria 3082
76 Ga0207647_10013482 3300025904 Bacteria 5662
77 Ga0207705_10000651 3300025909 Bacteria 28902
78 Ga0207705_10005658 3300025909 Bacteria 9328
79 Ga0207705_10060910 3300025909 Bacteria 2726
80 Ga0207705_10125353 3300025909 Unclassified 1908
81 Ga0207705_10288179 3300025909 Bacteria 1258
82 Ga0207654_10000234 3300025911 Bacteria 33987
83 Ga0207707_10035264 3300025912 Bacteria 4375
84 Ga0207660_10170590 3300025917 Bacteria 1684
85 Ga0207662_10000947 3300025918 Bacteria 13475
86 Ga0207657_10001089 3300025919 Bacteria 28773
87 Ga0207657_10031027 3300025919 Bacteria 4846
88 Ga0207649_10062580 3300025920 Bacteria 2346
89 Ga0207652_10126435 3300025921 Bacteria 2277
90 Ga0207652_10344462 3300025921 Bacteria 1345
91 Ga0207681_10178343 3300025923 Bacteria 1616
92 Ga0207650_10295406 3300025925 Unclassified 1322
93 Ga0207644_10026902 3300025931 Bacteria 3971
94 Ga0207644_10057510 3300025931 Bacteria 2808
95 Ga0207690_10025205 3300025932 Bacteria 3731
96 Ga0207706_10046619 3300025933 Bacteria 3837
97 Ga0207706_10335512 3300025933 Bacteria 1315
98 Ga0207670_10089506 3300025936 Bacteria 2172
99 Ga0207691_10028249 3300025940 Bacteria 5254
100 Ga0207691_10225033 3300025940 Bacteria 1626
101 Ga0207661_10028913 3300025944 Bacteria 4251
102 Ga0207661_10033817 3300025944 Unclassified 3971
103 Ga0207661_10376489 3300025944 Unclassified 1284
104 Ga0207679_10032091 3300025945 Bacteria 3683
105 Ga0207679_10176401 3300025945 Bacteria 1764
106 Ga0207667_10102622 3300025949 Bacteria 2950
107 Ga0207668_10721164 3300025972 Bacteria 878
108 Ga0207640_10010841 3300025981 Bacteria 5146
109 Ga0207677_10000007 3300026023 Bacteria 274553
110 Ga0207677_10218185 3300026023 Bacteria 1528
111 Ga0207703_10174527 3300026035 Bacteria 1893
112 Ga0207676_10195048 3300026095 Unclassified 1785
113 Ga0207674_10032408 3300026116 Bacteria 5482
114 Ga0207674_10065994 3300026116 Bacteria 3646
115 Ga0207698_10092375 3300026142 Bacteria 2481
116 Ga0268266_10051979 3300028379 Bacteria 3517
117 Ga0307408_100023369 3300031548 Bacteria 4210
118 Ga0307408_100025197 3300031548 Bacteria 4072
119 Ga0307408_100058246 3300031548 Bacteria 2808
120 Ga0307408_100080790 3300031548 Bacteria 2429
121 Ga0307408_100092980 3300031548 Bacteria 2281
122 Ga0307405_10006715 3300031731 Bacteria 5686
123 Ga0307405_10010130 3300031731 Bacteria 4865
124 Ga0307405_10035837 3300031731 Bacteria 2967
125 Ga0307413_10074015 3300031824 Bacteria 2155
126 Ga0307413_10131415 3300031824 Bacteria 1714
127 Ga0307410_10002587 3300031852 Bacteria 8783
128 Ga0307410_10005289 3300031852 Bacteria 6811
129 Ga0307410_10009176 3300031852 Bacteria 5534
130 Ga0307410_10018837 3300031852 Bacteria 4181
131 Ga0307410_10194909 3300031852 Bacteria 1543
132 Ga0307406_10003696 3300031901 Bacteria 8332
133 Ga0307406_10025083 3300031901 Bacteria 3566
134 Ga0307406_10034195 3300031901 Bacteria 3116
135 Ga0307406_10051123 3300031901 Bacteria 2623
136 Ga0307406_10253791 3300031901 Bacteria 1326
137 Ga0307407_10005092 3300031903 Bacteria 5664
138 Ga0307407_10020402 3300031903 Bacteria 3395
139 Ga0307407_10025415 3300031903 Bacteria 3120
140 Ga0307407_10043406 3300031903 Bacteria 2527
141 Ga0307412_10037908 3300031911 Bacteria 3100
142 Ga0307412_10071241 3300031911 Bacteria 2372
143 Ga0307412_10090676 3300031911 Bacteria 2137
144 Ga0307412_10237601 3300031911 Bacteria 1407
145 Ga0307409_100002206 3300031995 Bacteria 10063
146 Ga0307409_100004244 3300031995 Bacteria 8001
147 Ga0307409_100052440 3300031995 Bacteria 3127
148 Ga0307409_100070077 3300031995 Bacteria 2781
149 Ga0307409_100072999 3300031995 Bacteria 2735
150 Ga0307409_100104574 3300031995 Bacteria 2358
151 Ga0307409_100397986 3300031995 Bacteria 1314
152 Ga0307416_100001033 3300032002 Bacteria 14788
153 Ga0307416_100065341 3300032002 Bacteria 2989
154 Ga0307416_100205770 3300032002 Bacteria 1872
155 Ga0307416_100206546 3300032002 Bacteria 1869
156 Ga0307416_100249078 3300032002 Bacteria 1727
157 Ga0307416_100253886 3300032002 Bacteria 1713
158 Ga0307414_10017003 3300032004 Bacteria 4440
159 Ga0307414_10034050 3300032004 Bacteria 3373
160 Ga0307414_10060641 3300032004 Bacteria 2676
161 Ga0307411_10001472 3300032005 Bacteria 9667
162 Ga0307411_10005818 3300032005 Bacteria 6108
163 Ga0307411_10102964 3300032005 Bacteria 2024
164 Ga0307411_10237109 3300032005 Bacteria 1425
165 Ga0307411_10253850 3300032005 Bacteria 1384
166 Ga0307415_100001839 3300032126 Bacteria 10403
167 Ga0307415_100035578 3300032126 Bacteria 3253
168 Ga0307415_100049193 3300032126 Bacteria 2849
169 Ga0307415_100070303 3300032126 Bacteria 2457
170 Ga0307415_100140679 3300032126 Bacteria 1843
171 Ga0373951_0025183 3300035091 Bacteria 1381
172 Ga0373931_0076571 3300035691 Bacteria 1838
173 Ga0395900_0063571 3300037418 Bacteria 3794
174 Ga0395900_0090241 3300037418 Bacteria 3150
175 Ga0395898_0008944 3300037466 Bacteria 10548
176 Ga0395901_0218030 3300038443 Bacteria 1995
177 Ga0395901_0622439 3300038443 Bacteria 1086
178 Ga0436360_0358960 3300039438 Bacteria 1212
179 Ga0436363_1577705 3300039450 Bacteria 3386
180 Ga0439448_0002646 3300042005 Bacteria 4888
181 Ga0439455_0001523 3300042012 Bacteria 3907
182 Ga0439446_0135289 3300042156 Bacteria 802
183 Ga0439458_0012909 3300042157 Bacteria 1878
184 Ga0439444_0004725 3300042437 Bacteria 1993
185 Ga0466961_0094611 3300044693 Bacteria 1885
186 Ga0466961_0125507 3300044693 Bacteria 1610
187 Ga0466963_0026661 3300044694 Bacteria 3696
188 Ga0466971_0061040 3300044719 Bacteria 1704
189 Ga0466957_0045142 3300044842 Bacteria 2672
190 Ga0466957_0053603 3300044842 Unclassified 2459
191 Ga0466959_0130469 3300045049 Bacteria 1781
192 Ga0451576_0007896 3300045051 Bacteria 12608
193 Ga0466958_0112087 3300045836 Bacteria 1703
194 Ga0495669_0209891 3300046684 Bacteria 932
195 Ga0496100_0121943 3300048903 Bacteria 1825
196 Ga0496105_0268708 3300048908 Bacteria 1378
197 Ga0496106_0067539 3300048909 Unclassified 2726
198 Ga0496108_0161896 3300048911 Bacteria 1934
199 Ga0496110_0167566 3300048913 Bacteria 1992
200 Ga0496112_0130655 3300048915 Bacteria 2482
201 Ga0496112_0160636 3300048915 Unclassified 2213
202 Ga0496113_0136171 3300048916 Unclassified 1930
203 Ga0496114_0454088 3300048917 Bacteria 1135
204 Ga0501031_0047045 3300049568 Bacteria 2812
205 Ga0501033_0145313 3300049570 Bacteria 1713
206 Ga0501037_0124216 3300049573 Bacteria 1854
207 Ga0501038_0290190 3300049574 Bacteria 1286
208 Ga0501038_0301647 3300049574 Unclassified 1257
209 Ga0501039_0202387 3300049575 Bacteria 1561
210 Ga0501040_0067718 3300049576 Bacteria 2461
211 Ga0501041_0047756 3300049577 Bacteria 2606
212 Ga0501042_0109752 3300049578 Bacteria 1986
213 Ga0501043_0078176 3300049579 Bacteria 2600
214 Ga0501043_0129005 3300049579 Unclassified 1982
215 Ga0501046_0318347 3300049580 Bacteria 1134
216 Ga0501047_0050339 3300049581 Bacteria 4023
217 Ga0501047_0079617 3300049581 Bacteria 3150
218 Ga0501067_0004991 3300049583 Bacteria 7376
219 Ga0501070_0167516 3300049586 Unclassified 1810
220 Ga0501071_0193373 3300049587 Bacteria 1526
221 Ga0501072_0071697 3300049588 Bacteria 2737
222 Ga0501074_0054815 3300049590 Bacteria 2875
223 Ga0501075_0017620 3300049591 Bacteria 5158
224 Ga0501075_0074579 3300049591 Bacteria 2566
225 Ga0501076_0009362 3300049592 Bacteria 7232
226 Ga0501077_0010753 3300049593 Bacteria 5699
227 Ga0501077_0055698 3300049593 Bacteria 2510
228 Ga0501249_034976 3300049679 Bacteria 1128
229 Ga0501079_0092760 3300049741 Bacteria 2339
230 Ga0501083_0083852 3300049744 Bacteria 2111
231 Ga0501270_003219 3300049767 Bacteria 1743
232 Ga0501045_0028591 3300049824 Bacteria 4023
233 nmdc:mga05p37_48688_c1 3300050507 Bacteria 5212
234 nmdc:mga09592_573274_c1 3300050508 Bacteria 968
235 nmdc:mga08y16_285648_c1 3300050511 Bacteria 1701
236 nmdc:mga0rr50_721_c1 3300050513 Bacteria 17825
237 Ga0501084_0013137 3300054114 Bacteria 6851
238 Ga0501084_0257700 3300054114 Bacteria 1472
239 Ga0590071_017619 3300059421 Bacteria 1678
240 Ga0501082_0031994 3300060353 Bacteria 4538
241 Ga0466962_0126220 3300061719 Bacteria 1235
242 Ga0530510_0200406 3300061734 Bacteria 1482

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300042156 Ga0439446_0135289 Ga0439446_0135289_13_714 226
2 3300059421 Ga0590071_017619 Ga0590071_017619_228_1091 239
3 3300049593 Ga0501077_0010753 Ga0501077_0010753_4933_5673 241
4 3300049744 Ga0501083_0083852 Ga0501083_0083852_1250_1996 241
5 3300054114 Ga0501084_0013137 Ga0501084_0013137_2688_3434 241
6 3300005458 Ga0070681_10068524 Ga0070681_100685244 242
7 3300005530 Ga0070679_100051564 Ga0070679_1000515643 242
8 3300025912 Ga0207707_10035264 Ga0207707_100352644 242
9 3300025921 Ga0207652_10126435 Ga0207652_101264353 242
10 3300009094 Ga0111539_10221526 Ga0111539_102215263 246
11 3300050507 nmdc:mga05p37_48688_c1 nmdc:mga05p37_48688_c1_2455_3324 246
12 3300005327 Ga0070658_10097652 Ga0070658_100976521 247
13 3300005329 Ga0070683_100105972 Ga0070683_1001059722 247
14 3300005331 Ga0070670_100378106 Ga0070670_1003781061 247
15 3300005336 Ga0070680_100357207 Ga0070680_1003572072 247
16 3300005339 Ga0070660_100333325 Ga0070660_1003333251 247
17 3300005344 Ga0070661_100113753 Ga0070661_1001137531 247
18 3300005539 Ga0068853_100589093 Ga0068853_1005890931 247
19 3300005564 Ga0070664_100009664 Ga0070664_1000096642 247
20 3300005577 Ga0068857_100075615 Ga0068857_1000756152 247
21 3300005616 Ga0068852_100152730 Ga0068852_1001527302 247
22 3300005618 Ga0068864_100144428 Ga0068864_1001444282 247
23 3300010375 Ga0105239_11136662 Ga0105239_111366621 247
24 3300025909 Ga0207705_10125353 Ga0207705_101253531 247
25 3300025919 Ga0207657_10031027 Ga0207657_100310274 247
26 3300025925 Ga0207650_10295406 Ga0207650_102954062 247
27 3300025944 Ga0207661_10376489 Ga0207661_103764891 247
28 3300026095 Ga0207676_10195048 Ga0207676_101950481 247
29 3300026116 Ga0207674_10065994 Ga0207674_100659943 247
30 3300032002 Ga0307416_100206546 Ga0307416_1002065462 248
31 3300005456 Ga0070678_100324023 Ga0070678_1003240232 249
32 3300025909 Ga0207705_10288179 Ga0207705_102881792 249
33 3300049574 Ga0501038_0301647 Ga0501038_0301647_37_834 249
34 3300005338 Ga0068868_100000239 Ga0068868_10000023925 251
35 3300020070 Ga0206356_11094901 Ga0206356_110949012 251
36 3300025321 Ga0207656_10013963 Ga0207656_100139632 251
37 3300026023 Ga0207677_10000007 Ga0207677_10000007156 251
38 3300031903 Ga0307407_10025415 Ga0307407_100254153 252
39 3300049583 Ga0501067_0004991 Ga0501067_0004991_4145_5041 252
40 3300005336 Ga0070680_100482927 Ga0070680_1004829271 253
41 3300005981 Ga0081538_10038610 Ga0081538_100386102 253
42 3300031995 Ga0307409_100072999 Ga0307409_1000729992 253
43 3300046684 Ga0495669_0209891 Ga0495669_0209891_131_913 253
44 3300005530 Ga0070679_100289007 Ga0070679_1002890072 254
45 3300007076 Ga0075435_100063003 Ga0075435_1000630033 254
46 3300031548 Ga0307408_100023369 Ga0307408_1000233692 254
47 3300031548 Ga0307408_100058246 Ga0307408_1000582463 254
48 3300031731 Ga0307405_10010130 Ga0307405_100101302 254
49 3300031824 Ga0307413_10131415 Ga0307413_101314152 254
50 3300031852 Ga0307410_10009176 Ga0307410_100091762 254
51 3300031852 Ga0307410_10194909 Ga0307410_101949092 254
52 3300031901 Ga0307406_10034195 Ga0307406_100341952 254
53 3300031903 Ga0307407_10043406 Ga0307407_100434062 254
54 3300031911 Ga0307412_10037908 Ga0307412_100379082 254
55 3300031911 Ga0307412_10071241 Ga0307412_100712411 254
56 3300031995 Ga0307409_100004244 Ga0307409_1000042442 254
57 3300031995 Ga0307409_100052440 Ga0307409_1000524402 254
58 3300032002 Ga0307416_100001033 Ga0307416_10000103312 254
59 3300032002 Ga0307416_100065341 Ga0307416_1000653414 254
60 3300032004 Ga0307414_10034050 Ga0307414_100340501 254
61 3300032005 Ga0307411_10001472 Ga0307411_1000147210 254
62 3300032005 Ga0307411_10102964 Ga0307411_101029642 254
63 3300032126 Ga0307415_100035578 Ga0307415_1000355781 254
64 3300032126 Ga0307415_100140679 Ga0307415_1001406792 254
65 3300042437 Ga0439444_0004725 Ga0439444_0004725_356_1279 254
66 3300048909 Ga0496106_0067539 Ga0496106_0067539_1941_2714 254
67 3300048913 Ga0496110_0167566 Ga0496110_0167566_49_822 254
68 3300048915 Ga0496112_0130655 Ga0496112_0130655_1256_2029 254
69 3300048917 Ga0496114_0454088 Ga0496114_0454088_83_856 254
70 3300049568 Ga0501031_0047045 Ga0501031_0047045_287_1207 254
71 3300049570 Ga0501033_0145313 Ga0501033_0145313_204_1124 254
72 3300049573 Ga0501037_0124216 Ga0501037_0124216_326_1246 254
73 3300049575 Ga0501039_0202387 Ga0501039_0202387_73_993 254
74 3300049576 Ga0501040_0067718 Ga0501040_0067718_1178_2098 254
75 3300049577 Ga0501041_0047756 Ga0501041_0047756_1415_2335 254
76 3300049578 Ga0501042_0109752 Ga0501042_0109752_619_1539 254
77 3300049579 Ga0501043_0078176 Ga0501043_0078176_1237_2157 254
78 3300049587 Ga0501071_0193373 Ga0501071_0193373_560_1480 254
79 3300049588 Ga0501072_0071697 Ga0501072_0071697_570_1490 254
80 3300049591 Ga0501075_0074579 Ga0501075_0074579_407_1327 254
81 3300049592 Ga0501076_0009362 Ga0501076_0009362_4212_5132 254
82 3300049593 Ga0501077_0055698 Ga0501077_0055698_230_1150 254
83 3300049741 Ga0501079_0092760 Ga0501079_0092760_143_1063 254
84 3300049824 Ga0501045_0028591 Ga0501045_0028591_1559_2479 254
85 3300050511 nmdc:mga08y16_285648_c1 nmdc:mga08y16_285648_c1_465_1382 254
86 3300054114 Ga0501084_0257700 Ga0501084_0257700_533_1453 254
87 3300060353 Ga0501082_0031994 Ga0501082_0031994_2479_3399 254
88 3300061734 Ga0530510_0200406 Ga0530510_0200406_22_942 254
89 3300031731 Ga0307405_10035837 Ga0307405_100358373 255
90 3300031852 Ga0307410_10005289 Ga0307410_100052892 255
91 3300031901 Ga0307406_10025083 Ga0307406_100250832 255
92 3300031995 Ga0307409_100070077 Ga0307409_1000700771 255
93 3300032002 Ga0307416_100249078 Ga0307416_1002490782 255
94 3300032004 Ga0307414_10060641 Ga0307414_100606412 255
95 3300032005 Ga0307411_10237109 Ga0307411_102371092 255
96 3300005354 Ga0070675_100408747 Ga0070675_1004087472 256
97 3300005456 Ga0070678_100390802 Ga0070678_1003908022 256
98 3300005530 Ga0070679_100314004 Ga0070679_1003140041 256
99 3300005535 Ga0070684_100145567 Ga0070684_1001455672 256
100 3300009174 Ga0105241_10000020 Ga0105241_1000002082 256
101 3300025911 Ga0207654_10000234 Ga0207654_1000023416 256
102 3300025945 Ga0207679_10176401 Ga0207679_101764012 256
103 3300031548 Ga0307408_100025197 Ga0307408_1000251972 256
104 3300031548 Ga0307408_100080790 Ga0307408_1000807902 256
105 3300031824 Ga0307413_10074015 Ga0307413_100740152 256
106 3300031852 Ga0307410_10018837 Ga0307410_100188372 256
107 3300031901 Ga0307406_10253791 Ga0307406_102537912 256
108 3300031903 Ga0307407_10020402 Ga0307407_100204023 256
109 3300031911 Ga0307412_10090676 Ga0307412_100906762 256
110 3300031995 Ga0307409_100397986 Ga0307409_1003979862 256
111 3300032002 Ga0307416_100253886 Ga0307416_1002538861 256
112 3300032004 Ga0307414_10017003 Ga0307414_100170032 256
113 3300032005 Ga0307411_10005818 Ga0307411_100058184 256
114 3300032126 Ga0307415_100070303 Ga0307415_1000703032 256
115 3300042157 Ga0439458_0012909 Ga0439458_0012909_699_1571 256
116 3300049679 Ga0501249_034976 Ga0501249_034976_111_1013 256
117 3300049767 Ga0501270_003219 Ga0501270_003219_169_1071 256
118 3300005327 Ga0070658_10003874 Ga0070658_100038746 257
119 3300005327 Ga0070658_10012414 Ga0070658_100124143 257
120 3300005366 Ga0070659_100036026 Ga0070659_1000360263 257
121 3300005530 Ga0070679_100232996 Ga0070679_1002329962 257
122 3300005539 Ga0068853_100576338 Ga0068853_1005763381 257
123 3300005564 Ga0070664_100070964 Ga0070664_1000709642 257
124 3300005616 Ga0068852_100029126 Ga0068852_1000291263 257
125 3300013105 Ga0157369_10020803 Ga0157369_100208036 257
126 3300013307 Ga0157372_10061190 Ga0157372_100611903 257
127 3300025909 Ga0207705_10005658 Ga0207705_100056586 257
128 3300025909 Ga0207705_10060910 Ga0207705_100609103 257
129 3300037418 Ga0395900_0063571 Ga0395900_0063571_1022_1852 257
130 3300038443 Ga0395901_0622439 Ga0395901_0622439_173_1000 257
131 3300049579 Ga0501043_0129005 Ga0501043_0129005_173_1015 257
132 3300049580 Ga0501046_0318347 Ga0501046_0318347_93_935 257
133 3300049581 Ga0501047_0050339 Ga0501047_0050339_1895_2734 257
134 3300049581 Ga0501047_0079617 Ga0501047_0079617_743_1648 257
135 3300049586 Ga0501070_0167516 Ga0501070_0167516_708_1550 257
136 3300005329 Ga0070683_100754740 Ga0070683_1007547401 258
137 3300005344 Ga0070661_100108847 Ga0070661_1001088472 258
138 3300005354 Ga0070675_100168642 Ga0070675_1001686422 258
139 3300005355 Ga0070671_100053861 Ga0070671_1000538612 258
140 3300005356 Ga0070674_100221486 Ga0070674_1002214861 258
141 3300005457 Ga0070662_100089246 Ga0070662_1000892462 258
142 3300005543 Ga0070672_100188428 Ga0070672_1001884282 258
143 3300007076 Ga0075435_100000837 Ga0075435_10000083711 258
144 3300014326 Ga0157380_10058952 Ga0157380_100589522 258
145 3300025918 Ga0207662_10000947 Ga0207662_100009473 258
146 3300025920 Ga0207649_10062580 Ga0207649_100625802 258
147 3300025931 Ga0207644_10026902 Ga0207644_100269022 258
148 3300025972 Ga0207668_10721164 Ga0207668_107211641 258
149 3300026023 Ga0207677_10218185 Ga0207677_102181852 258
150 3300026116 Ga0207674_10032408 Ga0207674_100324083 258
151 3300031901 Ga0307406_10051123 Ga0307406_100511232 258
152 3300031911 Ga0307412_10237601 Ga0307412_102376012 258
153 3300031995 Ga0307409_100104574 Ga0307409_1001045741 258
154 3300032005 Ga0307411_10253850 Ga0307411_102538502 258
155 3300035091 Ga0373951_0025183 Ga0373951_0025183_319_1143 258
156 3300035691 Ga0373931_0076571 Ga0373931_0076571_712_1536 258
157 3300039438 Ga0436360_0358960 Ga0436360_0358960_67_888 258
158 3300039450 Ga0436363_1577705 Ga0436363_1577705_261_1082 258
159 3300045051 Ga0451576_0007896 Ga0451576_0007896_10921_11745 258
160 3300049574 Ga0501038_0290190 Ga0501038_0290190_318_1139 258
161 3300049590 Ga0501074_0054815 Ga0501074_0054815_2021_2839 258
162 3300049591 Ga0501075_0017620 Ga0501075_0017620_2042_2863 258
163 3300050508 nmdc:mga09592_573274_c1 nmdc:mga09592_573274_c1_49_951 258
164 3300050513 nmdc:mga0rr50_721_c1 nmdc:mga0rr50_721_c1_8590_9414 258
165 3300005329 Ga0070683_100099504 Ga0070683_1000995043 259
166 3300005458 Ga0070681_10232449 Ga0070681_102324492 259
167 3300005564 Ga0070664_100097083 Ga0070664_1000970833 259
168 3300013100 Ga0157373_10078028 Ga0157373_100780283 259
169 3300025921 Ga0207652_10344462 Ga0207652_103444621 259
170 3300025933 Ga0207706_10335512 Ga0207706_103355122 259
171 3300025944 Ga0207661_10028913 Ga0207661_100289133 259
172 3300044693 Ga0466961_0125507 Ga0466961_0125507_203_985 259
173 3300045049 Ga0466959_0130469 Ga0466959_0130469_631_1413 259
174 3300048916 Ga0496113_0136171 Ga0496113_0136171_845_1831 259
175 3300005330 Ga0070690_100179818 Ga0070690_1001798182 260
176 3300005333 Ga0070677_10026140 Ga0070677_100261402 260
177 3300005340 Ga0070689_100144116 Ga0070689_1001441162 260
178 3300005354 Ga0070675_100241827 Ga0070675_1002418272 260
179 3300005365 Ga0070688_100112067 Ga0070688_1001120672 260
180 3300005459 Ga0068867_100362109 Ga0068867_1003621092 260
181 3300005466 Ga0070685_10054401 Ga0070685_100544012 260
182 3300005548 Ga0070665_100000752 Ga0070665_10000075248 260
183 3300025936 Ga0207670_10089506 Ga0207670_100895062 260
184 3300025940 Ga0207691_10028249 Ga0207691_100282492 260
185 3300025945 Ga0207679_10032091 Ga0207679_100320913 260
186 3300026035 Ga0207703_10174527 Ga0207703_101745272 260
187 3300028379 Ga0268266_10051979 Ga0268266_100519792 260
188 3300037418 Ga0395900_0090241 Ga0395900_0090241_2053_2862 260
189 3300038443 Ga0395901_0218030 Ga0395901_0218030_524_1333 260
190 3300044693 Ga0466961_0094611 Ga0466961_0094611_960_1814 260
191 3300044694 Ga0466963_0026661 Ga0466963_0026661_1741_2595 260
192 3300044719 Ga0466971_0061040 Ga0466971_0061040_798_1652 260
193 3300044842 Ga0466957_0045142 Ga0466957_0045142_1287_2141 260
194 3300061719 Ga0466962_0126220 Ga0466962_0126220_54_908 260
195 3300005336 Ga0070680_100111604 Ga0070680_1001116042 261
196 3300005366 Ga0070659_100066718 Ga0070659_1000667183 261
197 3300005530 Ga0070679_100105029 Ga0070679_1001050292 261
198 3300005543 Ga0070672_100231677 Ga0070672_1002316772 261
199 3300005578 Ga0068854_100065544 Ga0068854_1000655442 261
200 3300005616 Ga0068852_100096930 Ga0068852_1000969302 261
201 3300005616 Ga0068852_100152815 Ga0068852_1001528152 261
202 3300013307 Ga0157372_10116150 Ga0157372_101161503 261
203 3300025904 Ga0207647_10013482 Ga0207647_100134823 261
204 3300025917 Ga0207660_10170590 Ga0207660_101705902 261
205 3300025923 Ga0207681_10178343 Ga0207681_101783432 261
206 3300025932 Ga0207690_10025205 Ga0207690_100252053 261
207 3300025940 Ga0207691_10225033 Ga0207691_102250332 261
208 3300025981 Ga0207640_10010841 Ga0207640_100108416 261
209 3300026142 Ga0207698_10092375 Ga0207698_100923752 261
210 3300031731 Ga0307405_10006715 Ga0307405_100067155 261
211 3300031852 Ga0307410_10002587 Ga0307410_1000258710 261
212 3300031901 Ga0307406_10003696 Ga0307406_100036967 261
213 3300031903 Ga0307407_10005092 Ga0307407_100050925 261
214 3300031995 Ga0307409_100002206 Ga0307409_1000022064 261
215 3300032126 Ga0307415_100001839 Ga0307415_1000018393 261
216 3300045836 Ga0466958_0112087 Ga0466958_0112087_470_1300 261
217 3300048903 Ga0496100_0121943 Ga0496100_0121943_374_1351 261
218 3300048908 Ga0496105_0268708 Ga0496105_0268708_374_1300 261
219 3300048911 Ga0496108_0161896 Ga0496108_0161896_96_1022 261
220 3300025944 Ga0207661_10033817 Ga0207661_100338172 262
221 3300032126 Ga0307415_100049193 Ga0307415_1000491932 262
222 3300044842 Ga0466957_0053603 Ga0466957_0053603_867_1694 262
223 3300048915 Ga0496112_0160636 Ga0496112_0160636_15_1001 263
224 3300003214 JGI25165J46597_1000320 JGI25165J46597_100032014 264
225 3300005327 Ga0070658_10000062 Ga0070658_1000006213 264
226 3300005339 Ga0070660_100000383 Ga0070660_1000003839 264
227 3300005355 Ga0070671_100150735 Ga0070671_1001507352 264
228 3300005457 Ga0070662_100079766 Ga0070662_1000797662 264
229 3300005563 Ga0068855_100195816 Ga0068855_1001958162 264
230 3300005616 Ga0068852_100214661 Ga0068852_1002146612 264
231 3300025231 Ga0207427_100574 Ga0207427_1005748 264
232 3300025261 Ga0209233_1000278 Ga0209233_100027839 264
233 3300025909 Ga0207705_10000651 Ga0207705_1000065114 264
234 3300025919 Ga0207657_10001089 Ga0207657_1000108915 264
235 3300025931 Ga0207644_10057510 Ga0207644_100575101 264
236 3300025933 Ga0207706_10046619 Ga0207706_100466194 264
237 3300025949 Ga0207667_10102622 Ga0207667_101026223 264
238 3300031548 Ga0307408_100092980 Ga0307408_1000929802 264
239 3300032002 Ga0307416_100205770 Ga0307416_1002057703 264
240 3300037466 Ga0395898_0008944 Ga0395898_0008944_1190_2068 264
241 3300042005 Ga0439448_0002646 Ga0439448_0002646_2625_3449 264
242 3300042012 Ga0439455_0001523 Ga0439455_0001523_1543_2367 264

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00497

SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

64

298

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6onp-assembly1.cif.gz_A crystal structure of periplasmic binding protein xoxj from methylobacterium extorquens am1 0.9363 25 264
6onp-assembly1.cif.gz_A crystal structure of periplasmic binding protein xoxj from methylobacterium extorquens am1 0.9234 25 264
5sv6-assembly1.cif.gz_A crystal structure of mxaj from methlophaga aminisulfidivorans mpt 0.8439 25 261
5sv6-assembly1.cif.gz_A crystal structure of mxaj from methlophaga aminisulfidivorans mpt 0.8117 25 261
5tuj-assembly1.cif.gz_C ancestral cationic amino acid solute binding protein (anccdt-1) 0.8082 24 259
ID Description Score Start End Superfamily
2y7iB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7848 23 257 3.40.190.10
5hmtA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7838 24 264 3.40.190.10
5uh0B01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7775 24 101 3.40.190.10
3mplA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7745 23 100 3.40.190.10
3h7mA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.769 21 263 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A1Y6KGE5-F1-model_v4 Putative methanol oxidation protein 0.9804 22 261 GO:0030313
AF-A0A2V7XKT6-F1-model_v4 Quinoprotein dehydrogenase-associated putative ABC transporter substrate-binding protein 0.9795 22 262 GO:0030313
AF-A0A2V8EM06-F1-model_v4 Quinoprotein dehydrogenase-associated putative ABC transporter substrate-binding protein 0.9764 52 261 GO:0030313
AF-A0A529HZ31-F1-model_v4 Quinoprotein dehydrogenase-associated putative ABC transporter substrate-binding protein 0.975 25 258 GO:0030313
AF-A0A529HZ31-F1-model_v4 Quinoprotein dehydrogenase-associated putative ABC transporter substrate-binding protein 0.9709 25 258 GO:0030313

Feature Viewer

pLDDT pTM Quality
89.11 0.85 High
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Predicted Structure (AlphaFold2)

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