F354444

General Info

Members Datasets Scaffolds Average Seq Length
242 196 484 248

Family's Representative Sequence

Representative Sequence 3300005455|Ga0070663_100000102|Ga0070663_1000001027
Length 260
Sequence MSTHDRTVDLREVEDGIVEVVMQDRANKNTFSNALIQGLSEAFDAIRSTGRYKAAILTGYDNYFASGGTQESLLYLSEGKGTFAEIAEGNSRNGVSLYSLALNCPIPVISAMQGHGVGGGFVMGLFADFVVLAKESLYTTNFMKYGFTPGMGATLVLPHKLGLPLAQDMLMTGRSFYGEELQRRGVPFPVVPRAEVLPRALELARNLAEKPRLSLVTLKDHLVAGLRDQLSVVIEQELAMHRKTFGQPEVKERIRALFGN

Samples

Sample ID Description Type Environment
1 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
2 3300003300 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_1 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003305 Avena fatua rhizosphere microbial communities - H3_Rhizo_Litter_13 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
8 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
11 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
39 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
40 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
41 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
42 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
43 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
62 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
63 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
64 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
65 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
66 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
67 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
68 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
71 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
72 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
73 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
76 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
77 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
81 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
82 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
83 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
84 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
85 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
96 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
97 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
98 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
99 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
100 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
101 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
102 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
103 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
104 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
108 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
114 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
115 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
116 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
117 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
118 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
119 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
120 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
121 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
122 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
123 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
126 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
127 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
128 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
129 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
136 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
141 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
149 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
150 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
153 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
154 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
155 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
156 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
157 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
158 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
159 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
160 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
161 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
162 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
163 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
164 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
165 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
166 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
167 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
168 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
169 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
170 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
171 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
172 2860837431 Bacillus sp. WR11 Isolate Unclassified
173 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
174 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
175 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
176 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
177 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
178 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
179 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
180 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
181 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
182 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
183 2969141011 Bacillus velezensis MH25 Isolate Unclassified
184 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
185 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
186 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
187 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
188 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
189 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
190 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
191 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
192 8019769354 Pseudomonas sp. MSSRFD41 Isolate Rhizosphere
193 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
194 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
195 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
196 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.97
Metatranscriptomes 1.24
Isolates 24.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.02
Nodule 0
Rhizoplane 0.41
Rhizosphere 73.14
Stem 0
Stem Tuber 0
Unclassified 4.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070663_100000102 3300005455 Bacteria 39130
2 Ga0006758J48902_1017782 3300003300 Bacteria 1432
3 Ga0006770J48903_1026683 3300003305 Bacteria 3026
4 rootH1_10082466 3300003316 Bacteria 3169
5 rootL2_10069318 3300003322 Bacteria 2974
6 rootL2_10218239 3300003322 Bacteria 7964
7 Ga0006562J51391_1007258 3300003578 Bacteria 4502
8 Ga0055526_1000041 3300003771 Bacteria 126657
9 Ga0055537_1000014 3300003773 Bacteria 126489
10 Ga0055524_1000072 3300003775 Bacteria 126657
11 Ga0055534_1000028 3300003784 Bacteria 126311
12 Ga0055528_1000026 3300003790 Bacteria 126489
13 Ga0070690_100421250 3300005330 Bacteria 984
14 Ga0070670_100096346 3300005331 Unclassified 2545
15 Ga0068869_100170637 3300005334 Bacteria 1699
16 Ga0070666_10020587 3300005335 Bacteria 4266
17 Ga0070674_100021147 3300005356 Bacteria 4171
18 Ga0070663_100397836 3300005455 Bacteria 1125
19 Ga0070662_100000655 3300005457 Bacteria 20977
20 Ga0070662_100009495 3300005457 Bacteria 6362
21 Ga0070685_10003856 3300005466 Bacteria 7587
22 Ga0068853_100025757 3300005539 Bacteria 4936
23 Ga0068853_100169783 3300005539 Bacteria 1973
24 Ga0070665_100505142 3300005548 Bacteria 1220
25 Ga0068856_100702799 3300005614 Bacteria 1031
26 Ga0068859_100188950 3300005617 Bacteria 2144
27 Ga0068863_100436154 3300005841 Bacteria 1284
28 Ga0068860_100284615 3300005843 Unclassified 1616
29 Ga0075431_100003841 3300006847 Bacteria 14607
30 Ga0075433_10343986 3300006852 Bacteria 1318
31 Ga0075434_100024326 3300006871 Bacteria 5920
32 Ga0097620_100188957 3300006931 Bacteria 2144
33 Ga0105240_10002608 3300009093 Bacteria 28829
34 Ga0105245_10287134 3300009098 Bacteria 1610
35 Ga0105247_10005920 3300009101 Bacteria 7630
36 Ga0114129_10166375 3300009147 Bacteria 3009
37 Ga0114129_10324935 3300009147 Bacteria 2044
38 Ga0105237_10000925 3300009545 Bacteria 39504
39 Ga0105238_10221328 3300009551 Bacteria 1869
40 Ga0105239_10001845 3300010375 Bacteria 27738
41 Ga0157374_10011161 3300013296 Bacteria 7766
42 Ga0157375_10815913 3300013308 Bacteria 1081
43 Ga0182006_1026880 3300015261 Bacteria 2353
44 Ga0182007_10000475 3300015262 Bacteria 24162
45 Ga0183360_10001 3300015689 Bacteria 3943671
46 Ga0213874_10007874 3300021377 Bacteria 2575
47 Ga0213876_10001298 3300021384 Bacteria 15738
48 Ga0209147_104668 3300025229 Bacteria 2213
49 Ga0209147_106434 3300025229 Bacteria 1628
50 Ga0209565_1000001 3300025263 Bacteria 2950419
51 Ga0209565_1002859 3300025263 Bacteria 5934
52 Ga0209673_1000001 3300025273 Bacteria 3176258
53 Ga0209675_1000001 3300025291 Bacteria 2950293
54 Ga0209564_1000001 3300025295 Bacteria 3176258
55 Ga0209256_1000002 3300025299 Bacteria 1906740
56 Ga0207710_10005416 3300025900 Bacteria 5498
57 Ga0207695_10045429 3300025913 Bacteria 4662
58 Ga0207671_10003908 3300025914 Bacteria 14524
59 Ga0207694_10067240 3300025924 Bacteria 2797
60 Ga0207650_10159525 3300025925 Unclassified 1786
61 Ga0207706_10000781 3300025933 Bacteria 32972
62 Ga0207706_10002120 3300025933 Bacteria 19429
63 Ga0207669_10015267 3300025937 Bacteria 3870
64 Ga0207689_10189490 3300025942 Bacteria 1697
65 Ga0207639_10440213 3300026041 Bacteria 1182
66 Ga0207698_10176103 3300026142 Bacteria 1889
67 Ga0268266_10436965 3300028379 Bacteria 1242
68 Ga0268265_10114837 3300028380 Bacteria 2206
69 Ga0265334_10051225 3300028573 Bacteria 1583
70 Ga0265334_10088013 3300028573 Unclassified 1137
71 Ga0307517_10005159 3300028786 Bacteria 19819
72 Ga0307515_10000627 3300028794 Bacteria 82049
73 Ga0307515_10085607 3300028794 Bacteria 4030
74 Ga0265324_10000003 3300029957 Bacteria 379527
75 Ga0307512_10088733 3300030522 Bacteria 2168
76 Ga0316177_1217839 3300030731 Bacteria 1574
77 Ga0316182_1003587 3300030745 Bacteria 3835
78 Ga0265331_10033629 3300031250 Bacteria 2534
79 Ga0265327_10000749 3300031251 Bacteria 50545
80 Ga0265316_10001646 3300031344 Bacteria 23798
81 Ga0307513_10023289 3300031456 Bacteria 7239
82 Ga0307513_10047334 3300031456 Bacteria 4679
83 Ga0307408_100321285 3300031548 Bacteria 1304
84 Ga0307508_10052167 3300031616 Bacteria 3634
85 Ga0265314_10049292 3300031711 Bacteria 2949
86 Ga0316576_10017192 3300031727 Bacteria 4907
87 Ga0307405_10044950 3300031731 Unclassified 2703
88 Ga0307407_10078138 3300031903 Bacteria 1993
89 Ga0307409_100050945 3300031995 Unclassified 3166
90 Ga0307416_100008788 3300032002 Bacteria 6550
91 Ga0307415_100027107 3300032126 Bacteria 3626
92 Ga0307507_10005969 3300033179 Bacteria 19300
93 Ga0307510_10052950 3300033180 Bacteria 4272
94 Ga0373949_0001334 3300035090 Bacteria 7102
95 Ga0373946_0102562 3300035171 Bacteria 1285
96 Ga0373927_0020613 3300035695 Bacteria 4323
97 Ga0373937_0748755 3300036401 Bacteria 924
98 Ga0395899_0010409 3300037312 Bacteria 7127
99 Ga0395900_0000034 3300037418 Bacteria 258846
100 Ga0395900_0000091 3300037418 Bacteria 167089
101 Ga0395900_0201572 3300037418 Bacteria 2013
102 Ga0395898_0037730 3300037466 Bacteria 4791
103 Ga0395898_0193407 3300037466 Archaea 1944
104 Ga0395898_0410039 3300037466 Unclassified 1292
105 Ga0395905_0030879 3300037471 Bacteria 5046
106 Ga0395905_0051005 3300037471 Bacteria 3875
107 Ga0436364_0658719 3300037853 Bacteria 1871
108 Ga0395901_0000127 3300038443 Bacteria 98365
109 Ga0395901_0000190 3300038443 Bacteria 78486
110 Ga0400487_44903 3300039110 Bacteria 1509
111 Ga0436365_1139222 3300039437 Bacteria 12304
112 Ga0436363_0331516 3300039450 Unclassified 3973
113 Ga0436362_0281502 3300039453 Bacteria 3706
114 Ga0439439_0052050 3300041406 Bacteria 1075
115 Ga0439433_0043404 3300041999 Bacteria 1050
116 Ga0439457_004137 3300042014 Bacteria 3832
117 Ga0439462_0075739 3300042015 Bacteria 916
118 Ga0439463_000004 3300042016 Bacteria 51759
119 Ga0450899_001729 3300042135 Bacteria 2421
120 Ga0450906_000286 3300042145 Bacteria 10060
121 Ga0466969_0033230 3300044656 Bacteria 2621
122 Ga0466969_0094186 3300044656 Unclassified 1416
123 Ga0466965_0051078 3300044683 Bacteria 2051
124 Ga0466966_0001684 3300044684 Bacteria 14262
125 Ga0466968_0043609 3300044735 Bacteria 1900
126 Ga0466970_0152113 3300044765 Unclassified 1278
127 Ga0466970_0186360 3300044765 Bacteria 1152
128 Ga0466957_0468043 3300044842 Bacteria 870
129 Ga0466967_0233462 3300045976 Bacteria 1752
130 Ga0495629_0000557 3300046459 Bacteria 30423
131 Ga0495638_0017238 3300046460 Bacteria 4822
132 Ga0495638_0107444 3300046460 Unclassified 1661
133 Ga0495584_0012001 3300046491 Bacteria 4430
134 Ga0495607_0065284 3300046501 Bacteria 2053
135 Ga0495620_0072089 3300046515 Bacteria 1411
136 Ga0495642_0208044 3300046528 Bacteria 853
137 Ga0495668_0001073 3300046616 Bacteria 28832
138 Ga0495611_0161186 3300046648 Bacteria 1048
139 Ga0495588_0000325 3300046674 Bacteria 31734
140 Ga0495671_0006453 3300046692 Bacteria 6774
141 Ga0495636_0035585 3300047318 Bacteria 2051
142 Ga0495685_004742 3300047447 Bacteria 4410
143 Ga0495681_0003127 3300047470 Bacteria 11610
144 Ga0496102_0375172 3300048905 Bacteria 1339
145 Ga0496116_0022121 3300048919 Bacteria 4777
146 Ga0496117_0045707 3300048920 Bacteria 3158
147 Ga0496118_0010212 3300048921 Bacteria 9322
148 Ga0496119_0010672 3300048922 Bacteria 7696
149 Ga0496120_0001966 3300048923 Bacteria 22459
150 Ga0496121_0000036 3300048924 Bacteria 362643
151 Ga0496121_0091841 3300048924 Bacteria 2368
152 Ga0496121_0103892 3300048924 Bacteria 2185
153 Ga0496122_0005118 3300048925 Bacteria 15820
154 Ga0496122_0104921 3300048925 Bacteria 1876
155 Ga0496123_0000388 3300048926 Bacteria 82554
156 Ga0496123_0051561 3300048926 Bacteria 2739
157 Ga0496125_0237343 3300048928 Bacteria 1160
158 Ga0496126_0010369 3300048929 Bacteria 9782
159 Ga0496126_0011411 3300048929 Bacteria 9202
160 Ga0501290_000156 3300049513 Bacteria 10872
161 Ga0501300_018348 3300049523 Bacteria 1022
162 Ga0501036_0676278 3300049572 Bacteria 854
163 Ga0501036_0764622 3300049572 Bacteria 797
164 Ga0501047_0176396 3300049581 Bacteria 2004
165 Ga0501047_0218282 3300049581 Bacteria 1763
166 Ga0501080_0625667 3300049742 Bacteria 954
167 Ga0501265_000469 3300049762 Bacteria 4251
168 Ga0501275_000222 3300049772 Bacteria 6631
169 Ga0501035_0000440 3300049822 Bacteria 46568
170 Ga0501044_0029005 3300049823 Bacteria 5837
171 Ga0501044_0252895 3300049823 Bacteria 1702
172 nmdc:mga05p37_136136_c1 3300050507 Bacteria 3012
173 nmdc:mga05p37_413984_c1 3300050507 Bacteria 1570
174 nmdc:mga06r32_3395_c1 3300050510 Bacteria 14240
175 nmdc:mga06r32_959210_c1 3300050510 Bacteria 809
176 nmdc:mga0n895_22669_c1 3300050512 Bacteria 5888
177 nmdc:mga0a205_353793_c1 3300050515 Bacteria 1336
178 Ga0500560_002952 3300053107 Bacteria 3353
179 Ga0500617_077413 3300053124 Bacteria 1447
180 Ga0500658_0064802 3300053134 Bacteria 1529
181 Ga0500568_0006209 3300053139 Bacteria 6034
182 Ga0501082_0000372 3300060353 Bacteria 39585
183 2511699615 2511231119 Bacteria 4019861
184 2511700152 2511231119 Bacteria 4019861
185 2524189846 2524023129 Bacteria 6762600
186 2540606841 2540341094 Bacteria 4061186
187 2545556168 2545555800 Bacteria 4222588
188 2545556837 2545555800 Bacteria 4222588
189 2563927208 2563366752 Bacteria 4961801
190 2578929599 2576861599 Bacteria 4217202
191 2578931087 2576861599 Bacteria 4217202
192 2631982871 2630968484 Bacteria 3876276
193 2631985279 2630968484 Bacteria 3876276
194 2651531969 2648501850 Bacteria 3975476
195 2651533028 2648501850 Bacteria 3975476
196 2674419256 2671180844 Bacteria 4164150
197 2674419920 2671180844 Bacteria 4164150
198 2695627566 2695420354 Bacteria 3922431
199 2695628130 2695420354 Bacteria 3922431
200 2717916161 2716884898 Bacteria 3928789
201 2717916640 2716884898 Bacteria 3928789
202 2723604907 2721755693 Bacteria 6126117
203 2730135528 2728369359 Bacteria 5621728
204 2808968925 2808606384 Bacteria 8474373
205 2809003756 2808606390 Bacteria 8476311
206 2809011033 2808606391 Bacteria 8308166
207 2809055096 2808606399 Bacteria 4021018
208 2812483557 2811994917 Bacteria 7761064
209 2821116810 2821111986 Bacteria 6894338
210 2860839291 2860837431 Bacteria 4202080
211 2877770393 2877768649 Bacteria 3957164
212 2877771036 2877768649 Bacteria 3957164
213 2880171396 2880169592 Bacteria 3900066
214 2880171901 2880169592 Bacteria 3900066
215 2889280819 2889276214 Bacteria 5979355
216 2891092386 2891088606 Bacteria 4762464
217 2897111415 2897109615 Bacteria 4009619
218 2904560935 2904560550 Bacteria 4029838
219 2904561991 2904560550 Bacteria 4029838
220 2907205918 2907202186 Bacteria 6632024
221 2939706481 2939702853 Bacteria 5139229
222 2941490291 2941489479 Bacteria 6313767
223 2969138681 2969136845 Bacteria 3923176
224 2969142845 2969141011 Bacteria 4118468
225 2969143483 2969141011 Bacteria 4118468
226 2969766683 2969765954 Bacteria 4216713
227 2969772476 2969770375 Bacteria 4271280
228 2971895161 2971893375 Bacteria 3929648
229 2971895683 2971893375 Bacteria 3929648
230 2980494475 2980492589 Bacteria 4072961
231 2996709836 2996706504 Bacteria 5757485
232 3006489225 3006486233 Bacteria 8157040
233 3006880924 3006879489 Bacteria 4064221
234 648170933 648028048 Bacteria 5394884
235 8019773121 8019769354 Bacteria 6924660
236 8019774771 8019769354 Bacteria 6924660
237 8022631017 8022630665 Bacteria 3886130
238 8022633736 8022630665 Bacteria 3886130
239 8051952647 8051952484 Bacteria 3926774
240 8052174793 8052174270 Bacteria 3881265
241 8052176909 8052174270 Bacteria 3881265
242 8057738077 8057733483 Bacteria 6578323
243 Ga0070663_100000102
244 Ga0006758J48902_1017782
245 Ga0006770J48903_1026683
246 rootH1_10082466
247 rootL2_10069318
248 rootL2_10218239
249 Ga0006562J51391_1007258
250 Ga0055526_1000041
251 Ga0055537_1000014
252 Ga0055524_1000072
253 Ga0055534_1000028
254 Ga0055528_1000026
255 Ga0070690_100421250
256 Ga0070670_100096346
257 Ga0068869_100170637
258 Ga0070666_10020587
259 Ga0070674_100021147
260 Ga0070663_100397836
261 Ga0070662_100000655
262 Ga0070662_100009495
263 Ga0070685_10003856
264 Ga0068853_100025757
265 Ga0068853_100169783
266 Ga0070665_100505142
267 Ga0068856_100702799
268 Ga0068859_100188950
269 Ga0068863_100436154
270 Ga0068860_100284615
271 Ga0075431_100003841
272 Ga0075433_10343986
273 Ga0075434_100024326
274 Ga0097620_100188957
275 Ga0105240_10002608
276 Ga0105245_10287134
277 Ga0105247_10005920
278 Ga0114129_10166375
279 Ga0114129_10324935
280 Ga0105237_10000925
281 Ga0105238_10221328
282 Ga0105239_10001845
283 Ga0157374_10011161
284 Ga0157375_10815913
285 Ga0182006_1026880
286 Ga0182007_10000475
287 Ga0183360_10001
288 Ga0213874_10007874
289 Ga0213876_10001298
290 Ga0209147_104668
291 Ga0209147_106434
292 Ga0209565_1000001
293 Ga0209565_1002859
294 Ga0209673_1000001
295 Ga0209675_1000001
296 Ga0209564_1000001
297 Ga0209256_1000002
298 Ga0207710_10005416
299 Ga0207695_10045429
300 Ga0207671_10003908
301 Ga0207694_10067240
302 Ga0207650_10159525
303 Ga0207706_10000781
304 Ga0207706_10002120
305 Ga0207669_10015267
306 Ga0207689_10189490
307 Ga0207639_10440213
308 Ga0207698_10176103
309 Ga0268266_10436965
310 Ga0268265_10114837
311 Ga0265334_10051225
312 Ga0265334_10088013
313 Ga0307517_10005159
314 Ga0307515_10000627
315 Ga0307515_10085607
316 Ga0265324_10000003
317 Ga0307512_10088733
318 Ga0316177_1217839
319 Ga0316182_1003587
320 Ga0265331_10033629
321 Ga0265327_10000749
322 Ga0265316_10001646
323 Ga0307513_10023289
324 Ga0307513_10047334
325 Ga0307408_100321285
326 Ga0307508_10052167
327 Ga0265314_10049292
328 Ga0316576_10017192
329 Ga0307405_10044950
330 Ga0307407_10078138
331 Ga0307409_100050945
332 Ga0307416_100008788
333 Ga0307415_100027107
334 Ga0307507_10005969
335 Ga0307510_10052950
336 Ga0373949_0001334
337 Ga0373946_0102562
338 Ga0373927_0020613
339 Ga0373937_0748755
340 Ga0395899_0010409
341 Ga0395900_0000034
342 Ga0395900_0000091
343 Ga0395900_0201572
344 Ga0395898_0037730
345 Ga0395898_0193407
346 Ga0395898_0410039
347 Ga0395905_0030879
348 Ga0395905_0051005
349 Ga0436364_0658719
350 Ga0395901_0000127
351 Ga0395901_0000190
352 Ga0400487_44903
353 Ga0436365_1139222
354 Ga0436363_0331516
355 Ga0436362_0281502
356 Ga0439439_0052050
357 Ga0439433_0043404
358 Ga0439457_004137
359 Ga0439462_0075739
360 Ga0439463_000004
361 Ga0450899_001729
362 Ga0450906_000286
363 Ga0466969_0033230
364 Ga0466969_0094186
365 Ga0466965_0051078
366 Ga0466966_0001684
367 Ga0466968_0043609
368 Ga0466970_0152113
369 Ga0466970_0186360
370 Ga0466957_0468043
371 Ga0466967_0233462
372 Ga0495629_0000557
373 Ga0495638_0017238
374 Ga0495638_0107444
375 Ga0495584_0012001
376 Ga0495607_0065284
377 Ga0495620_0072089
378 Ga0495642_0208044
379 Ga0495668_0001073
380 Ga0495611_0161186
381 Ga0495588_0000325
382 Ga0495671_0006453
383 Ga0495636_0035585
384 Ga0495685_004742
385 Ga0495681_0003127
386 Ga0496102_0375172
387 Ga0496116_0022121
388 Ga0496117_0045707
389 Ga0496118_0010212
390 Ga0496119_0010672
391 Ga0496120_0001966
392 Ga0496121_0000036
393 Ga0496121_0091841
394 Ga0496121_0103892
395 Ga0496122_0005118
396 Ga0496122_0104921
397 Ga0496123_0000388
398 Ga0496123_0051561
399 Ga0496125_0237343
400 Ga0496126_0010369
401 Ga0496126_0011411
402 Ga0501290_000156
403 Ga0501300_018348
404 Ga0501036_0676278
405 Ga0501036_0764622
406 Ga0501047_0176396
407 Ga0501047_0218282
408 Ga0501080_0625667
409 Ga0501265_000469
410 Ga0501275_000222
411 Ga0501035_0000440
412 Ga0501044_0029005
413 Ga0501044_0252895
414 nmdc:mga05p37_136136_c1
415 nmdc:mga05p37_413984_c1
416 nmdc:mga06r32_3395_c1
417 nmdc:mga06r32_959210_c1
418 nmdc:mga0n895_22669_c1
419 nmdc:mga0a205_353793_c1
420 Ga0500560_002952
421 Ga0500617_077413
422 Ga0500658_0064802
423 Ga0500568_0006209
424 Ga0501082_0000372
425 2511699615
426 2511700152
427 2524189846
428 2540606841
429 2545556168
430 2545556837
431 2563927208
432 2578929599
433 2578931087
434 2631982871
435 2631985279
436 2651531969
437 2651533028
438 2674419256
439 2674419920
440 2695627566
441 2695628130
442 2717916161
443 2717916640
444 2723604907
445 2730135528
446 2808968925
447 2809003756
448 2809011033
449 2809055096
450 2812483557
451 2821116810
452 2860839291
453 2877770393
454 2877771036
455 2880171396
456 2880171901
457 2889280819
458 2891092386
459 2897111415
460 2904560935
461 2904561991
462 2907205918
463 2939706481
464 2941490291
465 2969138681
466 2969142845
467 2969143483
468 2969766683
469 2969772476
470 2971895161
471 2971895683
472 2980494475
473 2996709836
474 3006489225
475 3006880924
476 648170933
477 8019773121
478 8019774771
479 8022631017
480 8022633736
481 8051952647
482 8052174793
483 8052176909
484 8057738077

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00378

ECH_1

Enoyl-CoA hydratase/isomerase

12

258

0.94

PF16113

ECH_2

Enoyl-CoA hydratase/isomerase

17

257

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
4q1i-assembly1.cif.gz_B structure and mechanism of a dehydratase/decarboxylase enzyme couple involved in polyketide beta-branching 0.9945 5 249
4q1k-assembly1.cif.gz_C structure and mechanism of a dehydratase/decarboxylase enzyme couple involved in polyketide beta-branching 0.9933 5 249
4q1j-assembly1.cif.gz_C structure and mechanism of a dehydratase/decarboxylase enzyme couple involved in polyketide beta-branching 0.9905 5 248
4q1h-assembly1.cif.gz_A structure and mechanism of a dehydratase/decarboxylase enzyme couple involved in polyketide beta-branching 0.9869 1 246
4q1i-assembly1.cif.gz_B structure and mechanism of a dehydratase/decarboxylase enzyme couple involved in polyketide beta-branching 0.9865 5 249
ID Description Score Start End Superfamily
4q1hB01 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9878 5 182 3.90.226.10
4q1hB01 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9715 5 182 3.90.226.10
4q1iC00 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9619 1 224 3.90.226.10
2q2xA01 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9548 5 182 3.90.226.10
4q1iC00 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9397 1 224 3.90.226.10
ID Description Score Start End GO Terms
AF-A0A2Z4MPL4-F1-model_v4 Enoyl-CoA hydratase 0.9974 3 249 GO:0003824
GO:0006635
AF-A0A1E7JW01-F1-model_v4 Enoyl-CoA hydratase 0.9968 20 249 GO:0003824
GO:0006635
AF-A0A077JFK7-F1-model_v4 Difficidin synthetase 0.9932 96 249 GO:0003824
AF-A0A2Z4MPL4-F1-model_v4 Enoyl-CoA hydratase 0.9894 3 249 GO:0003824
GO:0006635
AF-A0A1E7JW01-F1-model_v4 Enoyl-CoA hydratase 0.9882 20 249 GO:0003824
GO:0006635

Map