F354085

General Info

Members Datasets Scaffolds Average Seq Length
241 177 218 418

Family's Representative Sequence

Representative Sequence 3300048908|Ga0496105_0000017|Ga0496105_0000017_88129_89562
Length 453
Sequence VTVYAAAWLRCASAAAWVSPSRWKRFEFDEPKLNPHRMGGRKYVNSMDDHAPPFAGNLSYVQPTKTSPWGTFLAQVIVDIPIELDNGEMAHFEGFRAQHSFARGPGKGGVRFHPDVTLEEVMALAGWMTIKNAAVNLPFGGAKGGVRLDPRKLSKKELERVTRRYTSEIGAIIGPQQDIPAPDVNTDAQIMAWMMDTYAMNTGLASTGVVTGKPVHLGGSLGRVKATGRGVFVMGCEAMKRLNMPVEGARIAIQGFGNVGSTAAELFAAAGALIVAVQDSRGAIFCSKGLPVADLLAHSQGGGGVADFSGGETIDREAFWDVACDVLIPSALEGQLTELRAGRIKAQLVLEGANGPTLPEADDILGSRGIVVVPDVICNAGGVTVSYFEWVQDFASYYWTEDEINQRLAKIVLDALDHVWEASHRQRVSLRTAAFIVACERVLIAHVERGLYP

Samples

Sample ID Description Type Environment
1 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
2 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
3 2643221569 Achromobacter sp. Root565 Isolate Unclassified
4 2643221585 Pelomonas sp. Root662 Isolate Unclassified
5 2643221594 Achromobacter sp. Root170 Isolate Unclassified
6 2643221617 Nocardioides sp. Root79 Isolate Unclassified
7 2643221620 Nocardioides sp. Root240 Isolate Unclassified
8 2643221621 Achromobacter sp. Root83 Isolate Unclassified
9 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
10 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
11 2643221656 Pelomonas sp. Root405 Isolate Unclassified
12 2738541337 Pelomonas sp. BT06 Isolate Unclassified
13 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
14 2831864461 Roseateles noduli HZ7 Isolate Nodule
15 2855730933 Achromobacter sp. HZ28 Isolate Nodule
16 2855767633 Achromobacter sp. HZ34 Isolate Nodule
17 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
18 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
19 2858950400 Achromobacter sp. K91 Isolate Unclassified
20 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
21 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
22 2904504865 Serratia marcescens 1822 Isolate Unclassified
23 2941479691
24 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
25 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
26 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
27 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
28 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
29 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
30 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
31 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
32 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
33 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
34 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
35 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
38 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
39 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
40 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
41 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
42 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
43 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
44 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
45 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
46 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
47 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
48 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
49 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
50 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
51 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
52 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
53 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
57 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
58 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
59 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
60 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
62 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
63 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
64 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
65 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
67 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
68 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
73 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
74 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
78 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
79 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
102 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
103 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
104 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
105 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
106 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
113 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
117 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
118 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
119 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
120 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
126 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
127 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
128 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
129 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
130 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
131 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
132 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
133 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
134 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
135 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
136 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
137 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
138 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
139 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
140 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
141 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
142 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
143 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
144 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
145 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
146 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
147 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
148 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
149 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
150 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
151 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
152 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
153 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
154 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
155 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
156 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
157 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
160 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
161 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
162 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
165 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
168 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
169 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
173 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
176 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
177 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.04
Metatranscriptomes 0.41
Isolates 9.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.62
Nodule 2.07
Rhizoplane 4.98
Rhizosphere 65.98
Stem 0
Stem Tuber 0
Unclassified 15.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000235 3300003187 Bacteria 65683
2 rootL2_10002498 3300003322 Bacteria 21284
3 Ga0055525_1000036 3300003759 Bacteria 298878
4 Ga0055526_1001358 3300003771 Bacteria 17500
5 Ga0055530_10030523 3300003791 Bacteria 1426
6 Ga0055531_10000381 3300003794 Bacteria 42797
7 Ga0065165_1000304 3300005262 Bacteria 81791
8 Ga0065165_1002631 3300005262 Bacteria 14600
9 Ga0070690_100019997 3300005330 Bacteria 4075
10 Ga0068869_100004053 3300005334 Bacteria 9063
11 Ga0070680_100057232 3300005336 Bacteria 3187
12 Ga0068868_100052045 3300005338 Bacteria 3224
13 Ga0070692_10040344 3300005345 Bacteria 2387
14 Ga0070667_100043818 3300005367 Bacteria 3756
15 Ga0070714_100097955 3300005435 Bacteria 2579
16 Ga0070711_100049891 3300005439 Bacteria 2867
17 Ga0070705_100002304 3300005440 Bacteria 9646
18 Ga0070708_100038852 3300005445 Bacteria 4161
19 Ga0070708_100108537 3300005445 Bacteria 2549
20 Ga0070708_100181428 3300005445 Bacteria 1968
21 Ga0070663_100013010 3300005455 Bacteria 5286
22 Ga0070706_100000036 3300005467 Bacteria 151766
23 Ga0070706_100021534 3300005467 Archaea 5935
24 Ga0070707_100008469 3300005468 Bacteria 9553
25 Ga0070707_100014831 3300005468 Bacteria 7306
26 Ga0070698_100008230 3300005471 Bacteria 11281
27 Ga0070698_100009053 3300005471 Bacteria 10704
28 Ga0070698_100106571 3300005471 Archaea 2771
29 Ga0070699_100000184 3300005518 Bacteria 60897
30 Ga0070699_100038017 3300005518 Bacteria 4167
31 Ga0070697_100000579 3300005536 Bacteria 27659
32 Ga0070697_100003852 3300005536 Bacteria 11523
33 Ga0070697_100026524 3300005536 Bacteria 4630
34 Ga0070697_100085702 3300005536 Bacteria 2599
35 Ga0070696_100013569 3300005546 Bacteria 5469
36 Ga0070665_100015541 3300005548 Bacteria 7646
37 Ga0070704_100144801 3300005549 Bacteria 1860
38 Ga0068855_100266484 3300005563 Bacteria 1906
39 Ga0068852_100136096 3300005616 Bacteria 2268
40 Ga0068859_100089018 3300005617 Bacteria 3137
41 Ga0068861_100148011 3300005719 Bacteria 1924
42 Ga0068858_100126004 3300005842 Bacteria 2398
43 Ga0068860_100151919 3300005843 Bacteria 2230
44 Ga0068860_100285860 3300005843 Bacteria 1613
45 Ga0068862_100017481 3300005844 Bacteria 5973
46 Ga0070717_10000105 3300006028 Bacteria 66343
47 Ga0075364_10004388 3300006051 Bacteria 8107
48 Ga0075364_10034604 3300006051 Bacteria 3261
49 Ga0075362_10002462 3300006177 Bacteria 6226
50 Ga0097621_100076243 3300006237 Bacteria 2781
51 Ga0068871_100050608 3300006358 Bacteria 3360
52 Ga0075433_10045358 3300006852 Bacteria 3822
53 Ga0075434_100056017 3300006871 Bacteria 3917
54 Ga0075436_100040767 3300006914 Bacteria 3204
55 Ga0075436_100063712 3300006914 Archaea 2548
56 Ga0075436_100131895 3300006914 Bacteria 1752
57 Ga0097620_100089014 3300006931 Bacteria 3137
58 Ga0099823_1000015 3300006944 Bacteria 88096
59 Ga0075435_100028477 3300007076 Bacteria 4381
60 Ga0105243_10000294 3300009148 Bacteria 55103
61 Ga0105243_10046420 3300009148 Bacteria 3417
62 Ga0105248_10028557 3300009177 Bacteria 6216
63 Ga0105237_10145607 3300009545 Bacteria 2364
64 Ga0105239_10003078 3300010375 Bacteria 20729
65 Ga0157319_1000052 3300012497 Bacteria 13081
66 Ga0157326_1000174 3300012513 Bacteria 7119
67 Ga0157374_10347758 3300013296 Bacteria 1473
68 Ga0163162_10118712 3300013306 Bacteria 2747
69 Ga0157375_10012962 3300013308 Bacteria 7404
70 Ga0182008_10000626 3300014497 Bacteria 25908
71 Ga0213872_10000025 3300021361 Bacteria 151688
72 Ga0213872_10000266 3300021361 Bacteria 45265
73 Ga0213872_10000705 3300021361 Bacteria 25138
74 Ga0213872_10000942 3300021361 Bacteria 20402
75 Ga0209563_100014 3300025230 Bacteria 940582
76 Ga0209455_1000359 3300025272 Bacteria 42537
77 Ga0209676_1000623 3300025292 Bacteria 51464
78 Ga0209676_1004787 3300025292 Bacteria 7369
79 Ga0209025_1000026 3300025294 Bacteria 519850
80 Ga0209564_1000030 3300025295 Bacteria 503296
81 Ga0209050_1004254 3300025298 Bacteria 9835
82 Ga0209050_1004534 3300025298 Bacteria 9337
83 Ga0209050_1008124 3300025298 Bacteria 5689
84 Ga0209051_1000565 3300025303 Bacteria 44938
85 Ga0209051_1002996 3300025303 Bacteria 11480
86 Ga0209051_1005807 3300025303 Bacteria 7101
87 Ga0209257_1000117 3300025304 Bacteria 227328
88 Ga0207653_10006245 3300025885 Bacteria 3716
89 Ga0207684_10000010 3300025910 Bacteria 552805
90 Ga0207684_10000020 3300025910 Bacteria 342787
91 Ga0207684_10006017 3300025910 Bacteria 11098
92 Ga0207684_10058456 3300025910 Archaea 3272
93 Ga0207693_10001548 3300025915 Bacteria 20323
94 Ga0207646_10000021 3300025922 Bacteria 272003
95 Ga0207646_10001140 3300025922 Bacteria 33868
96 Ga0207646_10022832 3300025922 Archaea 5753
97 Ga0207646_10093407 3300025922 Bacteria 2694
98 Ga0207706_10096899 3300025933 Bacteria 2594
99 Ga0207709_10000180 3300025935 Bacteria 84481
100 Ga0207691_10130052 3300025940 Bacteria 2225
101 Ga0207711_10056393 3300025941 Bacteria 3376
102 Ga0207689_10013878 3300025942 Bacteria 6862
103 Ga0207639_10028079 3300026041 Bacteria 4104
104 Ga0207678_10022743 3300026067 Bacteria 5490
105 Ga0209389_1000831 3300027296 Bacteria 19759
106 Ga0268264_10139982 3300028381 Bacteria 2157
107 Ga0307515_10024901 3300028794 Bacteria 10389
108 Ga0307515_10107234 3300028794 Bacteria 3304
109 Ga0268256_1012867 3300030500 Bacteria 2566
110 Ga0265328_10030825 3300031239 Bacteria 1996
111 Ga0265331_10000005 3300031250 Bacteria 465192
112 Ga0265331_10003097 3300031250 Bacteria 10901
113 Ga0265331_10004174 3300031250 Bacteria 9056
114 Ga0265327_10000086 3300031251 Bacteria 202345
115 Ga0265316_10081059 3300031344 Bacteria 2488
116 Ga0265316_10141279 3300031344 Bacteria 1808
117 Ga0307408_100000039 3300031548 Bacteria 177825
118 Ga0307408_100013788 3300031548 Bacteria 5366
119 Ga0307408_100052341 3300031548 Bacteria 2944
120 Ga0265314_10011289 3300031711 Bacteria 7388
121 Ga0307405_10043918 3300031731 Bacteria 2730
122 Ga0307410_10024621 3300031852 Bacteria 3764
123 Ga0307412_10001318 3300031911 Bacteria 13900
124 Ga0307409_100191413 3300031995 Bacteria 1821
125 Ga0307416_100061353 3300032002 Bacteria 3068
126 Ga0307414_10014779 3300032004 Bacteria 4692
127 Ga0307411_10025557 3300032005 Bacteria 3540
128 Ga0307415_100204555 3300032126 Bacteria 1570
129 Ga0307507_10080414 3300033179 Bacteria 2874
130 Ga0373951_0007449 3300035091 Bacteria 2485
131 Ga0373939_0000534 3300035114 Bacteria 9569
132 Ga0373960_0000752 3300035121 Bacteria 6760
133 Ga0373931_0000993 3300035691 Bacteria 11992
134 Ga0373937_0017257 3300036401 Bacteria 6427
135 Ga0395900_0023383 3300037418 Bacteria 6326
136 Ga0395900_0226420 3300037418 Bacteria 1883
137 Ga0395900_0323456 3300037418 Bacteria 1522
138 Ga0395905_0011227 3300037471 Bacteria 8659
139 Ga0395905_0100991 3300037471 Bacteria 2708
140 Ga0395905_0154748 3300037471 Bacteria 2156
141 Ga0395901_0013498 3300038443 Bacteria 8307
142 Ga0436361_0086459 3300039447 Bacteria 24971
143 Ga0436361_0147437 3300039447 Bacteria 84337
144 Ga0436361_0518335 3300039447 Bacteria 20591
145 Ga0436361_0665346 3300039447 Bacteria 20156
146 Ga0436361_0916410 3300039447 Bacteria 83869
147 Ga0439436_0004348 3300041404 Bacteria 4340
148 Ga0439439_0013688 3300041406 Bacteria 1968
149 Ga0439466_0010756 3300041411 Bacteria 3397
150 Ga0451841_1186596 3300041498 Bacteria 1690
151 Ga0439431_0000912 3300041997 Bacteria 6398
152 Ga0439432_005531 3300042006 Bacteria 4546
153 Ga0439432_006591 3300042006 Bacteria 4137
154 Ga0439449_0000139 3300042007 Bacteria 24604
155 Ga0439449_0002137 3300042007 Bacteria 7762
156 Ga0450917_000122 3300042120 Bacteria 4899
157 Ga0450923_001811 3300042125 Bacteria 2931
158 Ga0450888_000715 3300042126 Bacteria 3159
159 Ga0450890_004424 3300042127 Bacteria 1835
160 Ga0450892_000365 3300042130 Bacteria 5373
161 Ga0450889_001455 3300042144 Bacteria 2438
162 Ga0439459_0000443 3300042438 Bacteria 5326
163 Ga0450893_0001608 3300042532 Bacteria 3463
164 Ga0451577_0080685 3300042876 Bacteria 2901
165 Ga0451577_0151454 3300042876 Bacteria 2087
166 Ga0466963_0070905 3300044694 Bacteria 2344
167 Ga0495605_0000069 3300046474 Bacteria 136202
168 Ga0495585_0015797 3300046492 Bacteria 4383
169 Ga0495652_0214897 3300046529 Bacteria 1449
170 Ga0495598_0020319 3300046537 Bacteria 1751
171 Ga0495621_0000029 3300046539 Bacteria 27570
172 Ga0495613_0005406 3300046689 Bacteria 9596
173 Ga0495675_0070562 3300047444 Bacteria 2206
174 Ga0495681_0023387 3300047470 Bacteria 3285
175 Ga0496101_0002582 3300048904 Bacteria 11124
176 Ga0496101_0028205 3300048904 Bacteria 3918
177 Ga0496104_0000044 3300048907 Bacteria 153699
178 Ga0496104_0064487 3300048907 Bacteria 3474
179 Ga0496104_0158021 3300048907 Bacteria 2175
180 Ga0496105_0000017 3300048908 Bacteria 210323
181 Ga0496105_0002326 3300048908 Bacteria 13779
182 Ga0496105_0106286 3300048908 Bacteria 2317
183 Ga0496105_0156192 3300048908 Bacteria 1873
184 Ga0496111_0030062 3300048914 Bacteria 3862
185 Ga0496113_0027358 3300048916 Bacteria 4088
186 Ga0496119_0007509 3300048922 Bacteria 9799
187 Ga0496120_0015600 3300048923 Bacteria 5002
188 Ga0496121_0000124 3300048924 Bacteria 170427
189 Ga0496121_0031390 3300048924 Bacteria 4854
190 Ga0496121_0078319 3300048924 Bacteria 2628
191 Ga0496122_0000316 3300048925 Bacteria 106100
192 Ga0496122_0062355 3300048925 Bacteria 2730
193 Ga0496123_0000297 3300048926 Bacteria 97340
194 Ga0496123_0089024 3300048926 Bacteria 1840
195 Ga0496124_0000004 3300048927 Bacteria 976131
196 Ga0496124_0023269 3300048927 Bacteria 5659
197 Ga0496125_0000570 3300048928 Bacteria 63252
198 Ga0496125_0025562 3300048928 Bacteria 5404
199 Ga0496126_0040410 3300048929 Bacteria 4324
200 Ga0501298_012781 3300049521 Bacteria 1477
201 Ga0501315_005495 3300049531 Bacteria 1374
202 Ga0501047_0000833 3300049581 Bacteria 31816
203 Ga0501233_010891 3300049668 Bacteria 1800
204 Ga0501229_005317 3300049706 Bacteria 1578
205 Ga0501267_000338 3300049764 Bacteria 3484
206 Ga0501035_0004069 3300049822 Bacteria 13907
207 Ga0501035_0058713 3300049822 Bacteria 3427
208 Ga0501044_0000183 3300049823 Bacteria 77954
209 Ga0501044_0003503 3300049823 Bacteria 17663
210 nmdc:mga03683_7742_c1 3300050489 Bacteria 3744
211 nmdc:mga07m45_1322_c1 3300050496 Bacteria 11291
212 nmdc:mga07m45_297_c1 3300050496 Bacteria 20081
213 nmdc:mga07m45_6432_c3 3300050496 Bacteria 1650
214 nmdc:mga0n895_269084_c1 3300050512 Bacteria 1729
215 nmdc:mga0rr50_55378_c1 3300050513 Bacteria 2959
216 nmdc:mga08x19_137900_c1 3300050514 Bacteria 1646
217 nmdc:mga08x19_74864_c1 3300050514 Bacteria 2213
218 Ga0500622_0007351 3300053156 Bacteria 6265

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037418 Ga0395900_0226420 Ga0395900_0226420_16_1128 370
2 3300005330 Ga0070690_100019997 Ga0070690_1000199974 377
3 3300005338 Ga0068868_100052045 Ga0068868_1000520451 377
4 3300005367 Ga0070667_100043818 Ga0070667_1000438183 377
5 3300005439 Ga0070711_100049891 Ga0070711_1000498915 377
6 3300005455 Ga0070663_100013010 Ga0070663_1000130106 377
7 3300005546 Ga0070696_100013569 Ga0070696_1000135695 377
8 3300005548 Ga0070665_100015541 Ga0070665_1000155416 377
9 3300005549 Ga0070704_100144801 Ga0070704_1001448011 377
10 3300005842 Ga0068858_100126004 Ga0068858_1001260041 377
11 3300006358 Ga0068871_100050608 Ga0068871_1000506084 377
12 3300025915 Ga0207693_10001548 Ga0207693_1000154815 377
13 3300025933 Ga0207706_10096899 Ga0207706_100968994 377
14 3300026041 Ga0207639_10028079 Ga0207639_100280794 377
15 3300026067 Ga0207678_10022743 Ga0207678_100227436 377
16 3300046537 Ga0495598_0020319 Ga0495598_0020319_605_1741 378
17 3300046539 Ga0495621_0000029 Ga0495621_0000029_3199_4335 378
18 3300047470 Ga0495681_0023387 Ga0495681_0023387_1867_3003 378
19 3300046529 Ga0495652_0214897 Ga0495652_0214897_63_1220 385
20 3300021361 Ga0213872_10000266 Ga0213872_1000026612 395
21 3300039447 Ga0436361_0147437 Ga0436361_0147437_15855_17126 395
22 3300006914 Ga0075436_100040767 Ga0075436_1000407673 398
23 3300050514 nmdc:mga08x19_137900_c1 nmdc:mga08x19_137900_c1_275_1540 398
24 3300005445 Ga0070708_100038852 Ga0070708_1000388523 399
25 3300005445 Ga0070708_100181428 Ga0070708_1001814282 402
26 3300005467 Ga0070706_100000036 Ga0070706_10000003648 402
27 3300005467 Ga0070706_100021534 Ga0070706_1000215342 402
28 3300005468 Ga0070707_100008469 Ga0070707_1000084699 402
29 3300005468 Ga0070707_100014831 Ga0070707_1000148311 402
30 3300005536 Ga0070697_100026524 Ga0070697_1000265245 402
31 3300009177 Ga0105248_10028557 Ga0105248_100285576 402
32 3300013296 Ga0157374_10347758 Ga0157374_103477582 402
33 3300013306 Ga0163162_10118712 Ga0163162_101187123 402
34 3300013308 Ga0157375_10012962 Ga0157375_100129627 402
35 3300025910 Ga0207684_10000020 Ga0207684_1000002049 402
36 3300025910 Ga0207684_10006017 Ga0207684_100060172 402
37 3300025922 Ga0207646_10000021 Ga0207646_10000021136 402
38 3300025922 Ga0207646_10001140 Ga0207646_100011409 402
39 3300048908 Ga0496105_0106286 Ga0496105_0106286_370_1614 402
40 3300005471 Ga0070698_100009053 Ga0070698_1000090538 403
41 3300005471 Ga0070698_100106571 Ga0070698_1001065714 404
42 3300005536 Ga0070697_100000579 Ga0070697_1000005799 404
43 3300025910 Ga0207684_10058456 Ga0207684_100584562 404
44 3300025922 Ga0207646_10022832 Ga0207646_100228322 404
45 3300005435 Ga0070714_100097955 Ga0070714_1000979553 405
46 3300048907 Ga0496104_0158021 Ga0496104_0158021_750_2045 405
47 3300048908 Ga0496105_0000017 Ga0496105_0000017_88129_89562 405
48 3300048908 Ga0496105_0156192 Ga0496105_0156192_165_1460 405
49 3300006914 Ga0075436_100063712 Ga0075436_1000637121 406
50 3300031852 Ga0307410_10024621 Ga0307410_100246212 407
51 3300031995 Ga0307409_100191413 Ga0307409_1001914132 407
52 3300048907 Ga0496104_0000044 Ga0496104_0000044_49043_50338 407
53 3300009545 Ga0105237_10145607 Ga0105237_101456072 408
54 3300039447 Ga0436361_0665346 Ga0436361_0665346_11061_12332 408
55 3300021361 Ga0213872_10000025 Ga0213872_1000002565 409
56 3300037471 Ga0395905_0154748 Ga0395905_0154748_218_1492 409
57 3300039447 Ga0436361_0916410 Ga0436361_0916410_3338_4609 409
58 3300046492 Ga0495585_0015797 Ga0495585_0015797_2013_3287 409
59 3300048904 Ga0496101_0028205 Ga0496101_0028205_1417_2712 409
60 3300048907 Ga0496104_0064487 Ga0496104_0064487_434_1729 409
61 3300048908 Ga0496105_0002326 Ga0496105_0002326_974_2269 409
62 3300048914 Ga0496111_0030062 Ga0496111_0030062_986_2281 409
63 3300048916 Ga0496113_0027358 Ga0496113_0027358_2362_3657 409
64 3300031239 Ga0265328_10030825 Ga0265328_100308252 411
65 3300031250 Ga0265331_10004174 Ga0265331_100041746 411
66 3300031251 Ga0265327_10000086 Ga0265327_1000008642 411
67 3300032004 Ga0307414_10014779 Ga0307414_100147792 412
68 3300032005 Ga0307411_10025557 Ga0307411_100255574 412
69 3300005844 Ga0068862_100017481 Ga0068862_1000174814 413
70 3300031250 Ga0265331_10000005 Ga0265331_10000005160 413
71 3300006177 Ga0075362_10002462 Ga0075362_100024623 414
72 3300032126 Ga0307415_100204555 Ga0307415_1002045551 414
73 3300037418 Ga0395900_0023383 Ga0395900_0023383_2692_3957 414
74 3300037471 Ga0395905_0100991 Ga0395905_0100991_743_2008 414
75 3300038443 Ga0395901_0013498 Ga0395901_0013498_3217_4482 414
76 3300041498 Ga0451841_1186596 Ga0451841_1186596_101_1414 414
77 3300042120 Ga0450917_000122 Ga0450917_000122_997_2268 414
78 3300042126 Ga0450888_000715 Ga0450888_000715_1859_3130 414
79 3300042130 Ga0450892_000365 Ga0450892_000365_4089_5360 414
80 3300042144 Ga0450889_001455 Ga0450889_001455_1117_2388 414
81 3300042532 Ga0450893_0001608 Ga0450893_0001608_1875_3146 414
82 3300049521 Ga0501298_012781 Ga0501298_012781_11_1282 414
83 3300049531 Ga0501315_005495 Ga0501315_005495_50_1321 414
84 3300049668 Ga0501233_010891 Ga0501233_010891_300_1571 414
85 3300049706 Ga0501229_005317 Ga0501229_005317_13_1284 414
86 3300049764 Ga0501267_000338 Ga0501267_000338_1900_3171 414
87 3300050489 nmdc:mga03683_7742_c1 nmdc:mga03683_7742_c1_625_1923 414
88 3300050496 nmdc:mga07m45_297_c1 nmdc:mga07m45_297_c1_9986_11257 414
89 3300005345 Ga0070692_10040344 Ga0070692_100403443 415
90 3300005440 Ga0070705_100002304 Ga0070705_1000023044 415
91 3300005445 Ga0070708_100108537 Ga0070708_1001085372 415
92 3300005471 Ga0070698_100008230 Ga0070698_1000082303 415
93 3300005518 Ga0070699_100000184 Ga0070699_10000018465 415
94 3300005518 Ga0070699_100038017 Ga0070699_1000380173 415
95 3300005536 Ga0070697_100003852 Ga0070697_1000038527 415
96 3300005536 Ga0070697_100085702 Ga0070697_1000857024 415
97 3300006028 Ga0070717_10000105 Ga0070717_1000010512 415
98 3300006852 Ga0075433_10045358 Ga0075433_100453582 415
99 3300006871 Ga0075434_100056017 Ga0075434_1000560173 415
100 3300006914 Ga0075436_100131895 Ga0075436_1001318952 415
101 3300007076 Ga0075435_100028477 Ga0075435_1000284774 415
102 3300012513 Ga0157326_1000174 Ga0157326_10001746 415
103 3300025885 Ga0207653_10006245 Ga0207653_100062453 415
104 3300025910 Ga0207684_10000010 Ga0207684_10000010246 415
105 3300025922 Ga0207646_10093407 Ga0207646_100934072 415
106 3300050512 nmdc:mga0n895_269084_c1 nmdc:mga0n895_269084_c1_258_1535 415
107 3300050513 nmdc:mga0rr50_55378_c1 nmdc:mga0rr50_55378_c1_984_2261 415
108 3300050514 nmdc:mga08x19_74864_c1 nmdc:mga08x19_74864_c1_347_1624 415
109 iso_pu_bacteria 2643221617 2644100275 415
110 iso_pu_bacteria 2643221620 2644116683 415
111 3300010375 Ga0105239_10003078 Ga0105239_100030787 416
112 3300037418 Ga0395900_0323456 Ga0395900_0323456_63_1316 416
113 3300047444 Ga0495675_0070562 Ga0495675_0070562_373_1677 416
114 3300009148 Ga0105243_10000294 Ga0105243_1000029414 417
115 3300025292 Ga0209676_1000623 Ga0209676_100062319 417
116 3300025303 Ga0209051_1000565 Ga0209051_100056518 417
117 3300025935 Ga0207709_10000180 Ga0207709_1000018039 417
118 3300032002 Ga0307416_100061353 Ga0307416_1000613533 417
119 3300041411 Ga0439466_0010756 Ga0439466_0010756_1981_3252 417
120 3300041997 Ga0439431_0000912 Ga0439431_0000912_3631_4902 417
121 3300042006 Ga0439432_006591 Ga0439432_006591_1280_2551 417
122 3300042007 Ga0439449_0000139 Ga0439449_0000139_4824_6095 417
123 3300037471 Ga0395905_0011227 Ga0395905_0011227_46_1317 418
124 3300031548 Ga0307408_100052341 Ga0307408_1000523412 419
125 3300031731 Ga0307405_10043918 Ga0307405_100439182 419
126 3300041404 Ga0439436_0004348 Ga0439436_0004348_1348_2679 419
127 3300042006 Ga0439432_005531 Ga0439432_005531_897_2228 419
128 3300042007 Ga0439449_0002137 Ga0439449_0002137_2402_3733 419
129 3300042125 Ga0450923_001811 Ga0450923_001811_1364_2695 419
130 3300050496 nmdc:mga07m45_1322_c1 nmdc:mga07m45_1322_c1_1542_2873 419
131 iso_pu_bacteria 2643221544 2643744593 419
132 iso_pu_bacteria 2643221585 2643934597 419
133 iso_pu_bacteria 2643221639 2644219135 419
134 iso_pu_bacteria 2643221646 2644255649 419
135 iso_pu_bacteria 2643221656 2644316083 419
136 iso_pu_bacteria 2738541337 2739054115 419
137 iso_pu_bacteria 2831864461 2831864889 419
138 iso_pu_bacteria 2886848708 2886850759 419
139 iso_pu_bacteria 2904504865 2904508515 419
140 3300042876 Ga0451577_0151454 Ga0451577_0151454_240_1556 421
141 3300041406 Ga0439439_0013688 Ga0439439_0013688_189_1520 422
142 3300042876 Ga0451577_0080685 Ga0451577_0080685_1351_2619 422
143 3300003322 rootL2_10002498 rootL2_1000249816 423
144 3300003759 Ga0055525_1000036 Ga0055525_10000368 423
145 3300003771 Ga0055526_1001358 Ga0055526_10013582 423
146 3300003791 Ga0055530_10030523 Ga0055530_100305231 423
147 3300003794 Ga0055531_10000381 Ga0055531_1000038120 423
148 3300005262 Ga0065165_1000304 Ga0065165_100030410 423
149 3300005262 Ga0065165_1002631 Ga0065165_10026313 423
150 3300006944 Ga0099823_1000015 Ga0099823_100001529 423
151 3300009148 Ga0105243_10046420 Ga0105243_100464202 423
152 3300012497 Ga0157319_1000052 Ga0157319_10000523 423
153 3300021361 Ga0213872_10000705 Ga0213872_1000070520 423
154 3300021361 Ga0213872_10000942 Ga0213872_100009427 423
155 3300025230 Ga0209563_100014 Ga0209563_100014391 423
156 3300025295 Ga0209564_1000030 Ga0209564_1000030300 423
157 3300025298 Ga0209050_1004254 Ga0209050_10042546 423
158 3300025298 Ga0209050_1004534 Ga0209050_10045344 423
159 3300025303 Ga0209051_1002996 Ga0209051_10029969 423
160 3300025303 Ga0209051_1005807 Ga0209051_10058075 423
161 3300025304 Ga0209257_1000117 Ga0209257_100011791 423
162 3300027296 Ga0209389_1000831 Ga0209389_100083110 423
163 3300028794 Ga0307515_10024901 Ga0307515_100249014 423
164 3300028794 Ga0307515_10107234 Ga0307515_101072342 423
165 3300031548 Ga0307408_100000039 Ga0307408_100000039145 423
166 3300031548 Ga0307408_100013788 Ga0307408_1000137882 423
167 3300035091 Ga0373951_0007449 Ga0373951_0007449_882_2153 423
168 3300035114 Ga0373939_0000534 Ga0373939_0000534_2970_4241 423
169 3300035121 Ga0373960_0000752 Ga0373960_0000752_2665_3936 423
170 3300035691 Ga0373931_0000993 Ga0373931_0000993_4354_5625 423
171 3300039447 Ga0436361_0086459 Ga0436361_0086459_15428_16699 423
172 3300039447 Ga0436361_0518335 Ga0436361_0518335_11550_12821 423
173 3300042127 Ga0450890_004424 Ga0450890_004424_67_1338 423
174 3300042438 Ga0439459_0000443 Ga0439459_0000443_507_1778 423
175 3300044694 Ga0466963_0070905 Ga0466963_0070905_209_1480 423
176 3300048927 Ga0496124_0023269 Ga0496124_0023269_1501_2772 423
177 3300050496 nmdc:mga07m45_6432_c3 nmdc:mga07m45_6432_c3_200_1471 423
178 3300053156 Ga0500622_0007351 Ga0500622_0007351_3088_4359 423
179 3300014497 Ga0182008_10000626 Ga0182008_1000062615 424
180 3300046474 Ga0495605_0000069 Ga0495605_0000069_24001_25275 424
181 3300048904 Ga0496101_0002582 Ga0496101_0002582_1666_2940 424
182 3300005336 Ga0070680_100057232 Ga0070680_1000572324 425
183 3300033179 Ga0307507_10080414 Ga0307507_100804143 425
184 iso_pu_bacteria 2599185292 2599907077 425
185 iso_pu_bacteria 2643221569 2643863287 425
186 iso_pu_bacteria 2643221594 2643978688 425
187 iso_pu_bacteria 2643221621 2644121831 425
188 iso_pu_bacteria 2808606395 2809036555 425
189 iso_pu_bacteria 2855730933 2855732151 425
190 iso_pu_bacteria 2855767633 2855768859 425
191 iso_pu_bacteria 2857537821 2857541254 425
192 iso_pu_bacteria 2858950400 2858950417 425
193 iso_pu_bacteria 2881412998 2881415203 425
194 iso_pu_bacteria 2941479691 2941481131 425
195 3300005334 Ga0068869_100004053 Ga0068869_1000040538 426
196 3300005617 Ga0068859_100089018 Ga0068859_1000890184 426
197 3300005719 Ga0068861_100148011 Ga0068861_1001480112 426
198 3300005843 Ga0068860_100285860 Ga0068860_1002858602 426
199 3300006931 Ga0097620_100089014 Ga0097620_1000890141 426
200 3300025940 Ga0207691_10130052 Ga0207691_101300522 426
201 3300025941 Ga0207711_10056393 Ga0207711_100563933 426
202 3300025942 Ga0207689_10013878 Ga0207689_100138787 426
203 3300031250 Ga0265331_10003097 Ga0265331_1000309710 426
204 3300031344 Ga0265316_10081059 Ga0265316_100810592 426
205 3300031344 Ga0265316_10141279 Ga0265316_101412791 426
206 3300031711 Ga0265314_10011289 Ga0265314_100112893 426
207 iso_pu_bacteria 2857542790 2857545937 426
208 3300006051 Ga0075364_10034604 Ga0075364_100346042 427
209 3300003187 JGI25151J46595_10000235 JGI25151J46595_1000023520 429
210 3300005563 Ga0068855_100266484 Ga0068855_1002664841 429
211 3300005616 Ga0068852_100136096 Ga0068852_1001360962 429
212 3300005843 Ga0068860_100151919 Ga0068860_1001519192 429
213 3300006051 Ga0075364_10004388 Ga0075364_100043887 429
214 3300006237 Ga0097621_100076243 Ga0097621_1000762432 429
215 3300025272 Ga0209455_1000359 Ga0209455_100035912 429
216 3300025292 Ga0209676_1004787 Ga0209676_10047873 429
217 3300025294 Ga0209025_1000026 Ga0209025_1000026162 429
218 3300025298 Ga0209050_1008124 Ga0209050_10081242 429
219 3300028381 Ga0268264_10139982 Ga0268264_101399822 429
220 3300030500 Ga0268256_1012867 Ga0268256_10128672 429
221 3300031911 Ga0307412_10001318 Ga0307412_100013189 429
222 3300036401 Ga0373937_0017257 Ga0373937_0017257_427_1743 429
223 3300046689 Ga0495613_0005406 Ga0495613_0005406_3824_5140 429
224 3300048922 Ga0496119_0007509 Ga0496119_0007509_5213_6532 429
225 3300048923 Ga0496120_0015600 Ga0496120_0015600_191_1510 429
226 3300048924 Ga0496121_0000124 Ga0496121_0000124_54784_56103 429
227 3300048924 Ga0496121_0031390 Ga0496121_0031390_2190_3479 429
228 3300048924 Ga0496121_0078319 Ga0496121_0078319_1198_2517 429
229 3300048925 Ga0496122_0000316 Ga0496122_0000316_53026_54345 429
230 3300048925 Ga0496122_0062355 Ga0496122_0062355_111_1403 429
231 3300048926 Ga0496123_0000297 Ga0496123_0000297_53026_54345 429
232 3300048926 Ga0496123_0089024 Ga0496123_0089024_474_1793 429
233 3300048927 Ga0496124_0000004 Ga0496124_0000004_417716_419008 429
234 3300048928 Ga0496125_0000570 Ga0496125_0000570_61791_63110 429
235 3300048928 Ga0496125_0025562 Ga0496125_0025562_1698_3017 429
236 3300048929 Ga0496126_0040410 Ga0496126_0040410_2835_4154 429
237 3300049581 Ga0501047_0000833 Ga0501047_0000833_8685_9974 429
238 3300049822 Ga0501035_0004069 Ga0501035_0004069_1742_3031 429
239 3300049822 Ga0501035_0058713 Ga0501035_0058713_272_1561 429
240 3300049823 Ga0501044_0000183 Ga0501044_0000183_21811_23100 429
241 3300049823 Ga0501044_0003503 Ga0501044_0003503_7803_9092 429

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00208

ELFV_dehydrog

Glutamate/Leucine/Phenylalanine/Valine dehydrogenase

218

450

0.99

PF02812

ELFV_dehydrog_N

Glu/Leu/Phe/Val dehydrogenase, dimerisation domain

74

200

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2tmg-assembly1.cif.gz_A thermotoga maritima glutamate dehydrogenase mutant s128r, t158e, n117r, s160e 0.9763 19 425
3aog-assembly2.cif.gz_K crystal structure of glutamate dehydrogenase (gdhb) from thermus thermophilus (glu bound form) 0.9758 8 429
3aog-assembly2.cif.gz_K crystal structure of glutamate dehydrogenase (gdhb) from thermus thermophilus (glu bound form) 0.9735 8 429
2tmg-assembly1.cif.gz_A thermotoga maritima glutamate dehydrogenase mutant s128r, t158e, n117r, s160e 0.9716 19 425
1b26-assembly1.cif.gz_F glutamate dehydrogenase 0.9691 19 426
ID Description Score Start End Superfamily
1b26A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.9957 50 192 3.40.50.10860
1b26A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.982 50 192 3.40.50.10860
3aogK03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9818 202 355 3.40.50.720
af_B4F9J5_176_410_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9808 195 426 3.40.50.720
3k8zD03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9785 202 354 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7W0R2V4-F1-model_v4 Glutamate dehydrogenase 1.001 43 167 GO:0004352
GO:0006538
AF-A0A6I1NYA2-F1-model_v4 Glu/Leu/Phe/Val dehydrogenase 0.9988 205 351 GO:0004352
GO:0006538
AF-A0A6P1B128-F1-model_v4 deleted 0.9973 63 221
AF-A0A3D0PR34-F1-model_v4 Glutamate dehydrogenase 0.997 63 188 GO:0004352
GO:0006538
AF-A0A497L759-F1-model_v4 Glutamate dehydrogenase 0.9969 40 139 GO:0004352
GO:0006538

Feature Viewer

pLDDT pTM Quality
94.35 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map