F354009
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 241 | 154 | 470 | 550 |
Family's Representative Sequence
| Representative Sequence | 3300044712|Ga0453684_0005531|Ga0453684_0005531_2421_4232 |
| Length | 603 |
| Sequence | MELYSAFLKTILKHGLSLFLCNKTGVFAVERVNSYSPAIGYNSRLKNQNQKNMKRRELIKNLAIAMPALYFSNGLKANTLLCVQSLKEPIARGPFKPDWQSLKHFQTPEWYKDAKFGIWAHWGPQCQPEAGDWYARGMYQEGSPQYKFHLEKYGHPSVFGFKDVINEWKAEKWDPEELVSLYKRAGAKYFVAMANHHDNMDLFKSTYQPNWNSTKVGPKKDIIKGWAKAAKNNDLPFGVSVHAAHAWSWFETSQRSDKNGTKAGVPYDGTMTKADGKGKWWDGIDPQELYAQNHPMSENSEDDAMIHRQWNWGNGVAKPTDAYIEKFYKRTIELIDKYSPDLVYFDDTALPLWPISDAGLRIAAHLYNSNIKKHGKLEAVLNGKILDEEQRKCMVWDIEKGRSNELEPFVWQTDTCLGNWHYDRSVFDRHGYKSAKTVIHNLIDIVSKNGNMLLNVPVRGDGTIDSDERAVVEEIGAWIKNNGECIFGTRPWKIFGEGPAQESAAALTAQGFNESGGKPFSSLDYRFTTKGDTLYAISLGWPENGKALIKSLSKGNSLRPEPVNRVEFLGQGDLKLEQKPEGLEVTLPENKPELNYAYSLKIS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 2 | 3300001977 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 | Metagenome | Rhizosphere |
| 3 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 4 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 5 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 6 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 7 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 8 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 9 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 10 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 13 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 20 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 23 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 24 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 25 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 26 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 27 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 28 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 29 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 30 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 31 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 54 | 3300015682 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 | Metagenome | Rhizosphere |
| 55 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300020077 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 57 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 58 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 61 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 62 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 97 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 98 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 99 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 100 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 101 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 102 | 3300035088 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 | Metagenome | Rhizosphere |
| 103 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 104 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 105 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 106 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 107 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 108 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 109 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 110 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 111 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 112 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 113 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 114 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 115 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 116 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 117 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 118 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 119 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 120 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 121 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 122 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 123 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 124 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049679 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought | Metagenome | Rhizosphere |
| 136 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 137 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 139 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 140 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 141 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 142 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 143 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 144 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 145 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 146 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 147 | 2513020052 | Flavobacterium sp. CF136 | Isolate | Rhizosphere |
| 148 | 2738541278 | Niastella sp. CF465 | Isolate | Unclassified |
| 149 | 2818991442 | Chitinophaga pinensis 1204 | Isolate | Unclassified |
| 150 | 2849281842 | Pedobacter sp. AK013 | Isolate | Rhizosphere |
| 151 | 2857627736 | Pedobacter sp. R-74587 | Isolate | Unclassified |
| 152 | 2919683626 | Flavobacterium piscis 4129 | Isolate | Unclassified |
| 153 | 2958512119 | Flavobacterium sp. Sd200 | Isolate | Rhizosphere |
| 154 | 8055592153 | Flavobacterium panacis DCY106 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.27 |
| Metatranscriptomes | 0.41 |
| Isolates | 3.32 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.22 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 86.72 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.66 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0453684_0005531 | 3300044712 | Bacteria | 24936 |
| 2 | JGI24746J21847_1000317 | 3300001977 | Bacteria | 6956 |
| 3 | JGI24737J22298_10011877 | 3300001990 | Bacteria | 2846 |
| 4 | JGI25162J39368_1000204 | 3300002737 | Bacteria | 62620 |
| 5 | JGI25154J39366_1000157 | 3300002738 | Bacteria | 52619 |
| 6 | rootH1_10005956 | 3300003316 | Bacteria | 4864 |
| 7 | rootH1_10005956 | 3300003323 | Bacteria | 5316 |
| 8 | rootH1_10113431 | 3300003316 | Bacteria | 3961 |
| 9 | rootH2_10001405 | 3300003320 | Bacteria | 34085 |
| 10 | rootH2_10032558 | 3300003320 | Bacteria | 26006 |
| 11 | rootH2_10049696 | 3300003320 | Bacteria | 7719 |
| 12 | rootL2_10189367 | 3300003322 | Bacteria | 3975 |
| 13 | rootH1_10003071 | 3300003323 | Bacteria | 22496 |
| 14 | rootH1_10015943 | 3300003316 | Bacteria | 11788 |
| 15 | rootH1_10015943 | 3300003323 | Bacteria | 27606 |
| 16 | Ga0070666_10000130 | 3300005335 | Bacteria | 53093 |
| 17 | Ga0070680_100133258 | 3300005336 | Bacteria | 2080 |
| 18 | Ga0068868_100014262 | 3300005338 | Bacteria | 5854 |
| 19 | Ga0068868_100035689 | 3300005338 | Bacteria | 3845 |
| 20 | Ga0070660_100074448 | 3300005339 | Bacteria | 2657 |
| 21 | Ga0070673_100011689 | 3300005364 | Bacteria | 6000 |
| 22 | Ga0070667_100007587 | 3300005367 | Bacteria | 8996 |
| 23 | Ga0070663_100030518 | 3300005455 | Bacteria | 3695 |
| 24 | Ga0070678_100003639 | 3300005456 | Bacteria | 8601 |
| 25 | Ga0070662_100000145 | 3300005457 | Bacteria | 40435 |
| 26 | Ga0068867_100006603 | 3300005459 | Bacteria | 8200 |
| 27 | Ga0070679_100020884 | 3300005530 | Bacteria | 6387 |
| 28 | Ga0070679_100029771 | 3300005530 | Bacteria | 5386 |
| 29 | Ga0068855_100000339 | 3300005563 | Bacteria | 58113 |
| 30 | Ga0068855_100008709 | 3300005563 | Bacteria | 12265 |
| 31 | Ga0068855_100031918 | 3300005563 | Bacteria | 6287 |
| 32 | Ga0068856_100007449 | 3300005614 | Bacteria | 10681 |
| 33 | Ga0068852_100000735 | 3300005616 | Bacteria | 21499 |
| 34 | Ga0068852_100020304 | 3300005616 | Bacteria | 5282 |
| 35 | Ga0068859_100000245 | 3300005617 | Bacteria | 53529 |
| 36 | Ga0068859_100015600 | 3300005617 | Bacteria | 7634 |
| 37 | Ga0068859_100044247 | 3300005617 | Bacteria | 4474 |
| 38 | Ga0068859_100046074 | 3300005617 | Bacteria | 4380 |
| 39 | Ga0068864_100043953 | 3300005618 | Bacteria | 3827 |
| 40 | Ga0068863_100012027 | 3300005841 | Bacteria | 8361 |
| 41 | Ga0068863_100024427 | 3300005841 | Bacteria | 5763 |
| 42 | Ga0068863_100120578 | 3300005841 | Bacteria | 2500 |
| 43 | Ga0068858_100003368 | 3300005842 | Bacteria | 15906 |
| 44 | Ga0068858_100005732 | 3300005842 | Bacteria | 12139 |
| 45 | Ga0068860_100000788 | 3300005843 | Bacteria | 35453 |
| 46 | Ga0068860_100001305 | 3300005843 | Bacteria | 27098 |
| 47 | Ga0068860_100068382 | 3300005843 | Bacteria | 3375 |
| 48 | Ga0068860_100072852 | 3300005843 | Bacteria | 3265 |
| 49 | Ga0068871_100000037 | 3300006358 | Bacteria | 70231 |
| 50 | Ga0068865_100000067 | 3300006881 | Bacteria | 54449 |
| 51 | Ga0097620_100000245 | 3300006931 | Bacteria | 53529 |
| 52 | Ga0097620_100015600 | 3300006931 | Bacteria | 7634 |
| 53 | Ga0097620_100044243 | 3300006931 | Bacteria | 4474 |
| 54 | Ga0097620_100046082 | 3300006931 | Bacteria | 4380 |
| 55 | Ga0105240_10029281 | 3300009093 | Bacteria | 7178 |
| 56 | Ga0105245_10066079 | 3300009098 | Bacteria | 3272 |
| 57 | Ga0105247_10000259 | 3300009101 | Bacteria | 48820 |
| 58 | Ga0105247_10015429 | 3300009101 | Bacteria | 4577 |
| 59 | Ga0114129_10000724 | 3300009147 | Bacteria | 41885 |
| 60 | Ga0114129_10020262 | 3300009147 | Bacteria | 9464 |
| 61 | Ga0105243_10005724 | 3300009148 | Bacteria | 9654 |
| 62 | Ga0105241_10000251 | 3300009174 | Bacteria | 40576 |
| 63 | Ga0105241_10002828 | 3300009174 | Bacteria | 12965 |
| 64 | Ga0105241_10012931 | 3300009174 | Bacteria | 6121 |
| 65 | Ga0105241_10038584 | 3300009174 | Bacteria | 3601 |
| 66 | Ga0105242_10011442 | 3300009176 | Bacteria | 6823 |
| 67 | Ga0105237_10001623 | 3300009545 | Bacteria | 29201 |
| 68 | Ga0105237_10001677 | 3300009545 | Bacteria | 28683 |
| 69 | Ga0105237_10023090 | 3300009545 | Bacteria | 6377 |
| 70 | Ga0105237_10036541 | 3300009545 | Bacteria | 4971 |
| 71 | Ga0105237_10048933 | 3300009545 | Bacteria | 4250 |
| 72 | Ga0105238_10015735 | 3300009551 | Bacteria | 7659 |
| 73 | Ga0105249_10001614 | 3300009553 | Bacteria | 19740 |
| 74 | Ga0105249_10002010 | 3300009553 | Bacteria | 17654 |
| 75 | Ga0105249_10217713 | 3300009553 | Bacteria | 1877 |
| 76 | Ga0105239_10000004 | 3300010375 | Bacteria | 532483 |
| 77 | Ga0105239_10215925 | 3300010375 | Unclassified | 2150 |
| 78 | Ga0157373_10000013 | 3300013100 | Bacteria | 186870 |
| 79 | Ga0157373_10008476 | 3300013100 | Bacteria | 7634 |
| 80 | Ga0157373_10049591 | 3300013100 | Bacteria | 2991 |
| 81 | Ga0157373_10050434 | 3300013100 | Bacteria | 2963 |
| 82 | Ga0157371_10000016 | 3300013102 | Bacteria | 330495 |
| 83 | Ga0157370_10007114 | 3300013104 | Bacteria | 12208 |
| 84 | Ga0157370_10024449 | 3300013104 | Bacteria | 5983 |
| 85 | Ga0157370_10079366 | 3300013104 | Bacteria | 3091 |
| 86 | Ga0157370_10095207 | 3300013104 | Bacteria | 2794 |
| 87 | Ga0157369_10000005 | 3300013105 | Bacteria | 470816 |
| 88 | Ga0157369_10000007 | 3300013105 | Bacteria | 402562 |
| 89 | Ga0157369_10002667 | 3300013105 | Bacteria | 21277 |
| 90 | Ga0157374_10000418 | 3300013296 | Bacteria | 38471 |
| 91 | Ga0157378_10004664 | 3300013297 | Bacteria | 12020 |
| 92 | Ga0157378_10005414 | 3300013297 | Bacteria | 11194 |
| 93 | Ga0157378_10018263 | 3300013297 | Bacteria | 6156 |
| 94 | Ga0163162_10000709 | 3300013306 | Bacteria | 30864 |
| 95 | Ga0157372_10000016 | 3300013307 | Bacteria | 220177 |
| 96 | Ga0157372_10001765 | 3300013307 | Bacteria | 23452 |
| 97 | Ga0157372_10020008 | 3300013307 | Bacteria | 7216 |
| 98 | Ga0157372_10027288 | 3300013307 | Bacteria | 6217 |
| 99 | Ga0157379_10096057 | 3300014968 | Bacteria | 2660 |
| 100 | Ga0157376_10021206 | 3300014969 | Bacteria | 5044 |
| 101 | Ga0182007_10000006 | 3300015262 | Bacteria | 427355 |
| 102 | Ga0183373_1001 | 3300015682 | Bacteria | 1410374 |
| 103 | Ga0163161_10001934 | 3300017792 | Bacteria | 15111 |
| 104 | Ga0206351_10543673 | 3300020077 | Bacteria | 3692 |
| 105 | Ga0213872_10020681 | 3300021361 | Bacteria | 3034 |
| 106 | Ga0207427_100223 | 3300025231 | Bacteria | 48426 |
| 107 | Ga0209437_100164 | 3300025233 | Bacteria | 145317 |
| 108 | Ga0209646_1000003 | 3300025246 | Bacteria | 1160860 |
| 109 | Ga0209026_1000473 | 3300025250 | Bacteria | 30746 |
| 110 | Ga0209233_1000242 | 3300025261 | Bacteria | 90301 |
| 111 | Ga0209758_1017909 | 3300025297 | Unclassified | 3499 |
| 112 | Ga0207426_1000187 | 3300025302 | Bacteria | 153809 |
| 113 | Ga0207710_10000244 | 3300025900 | Bacteria | 46212 |
| 114 | Ga0207710_10010337 | 3300025900 | Bacteria | 3928 |
| 115 | Ga0207680_10000090 | 3300025903 | Bacteria | 41836 |
| 116 | Ga0207647_10000302 | 3300025904 | Bacteria | 40592 |
| 117 | Ga0207645_10000067 | 3300025907 | Bacteria | 75648 |
| 118 | Ga0207654_10001052 | 3300025911 | Bacteria | 15064 |
| 119 | Ga0207654_10001422 | 3300025911 | Bacteria | 12701 |
| 120 | Ga0207654_10008277 | 3300025911 | Bacteria | 5251 |
| 121 | Ga0207695_10001921 | 3300025913 | Bacteria | 32318 |
| 122 | Ga0207671_10000907 | 3300025914 | Bacteria | 37431 |
| 123 | Ga0207671_10006718 | 3300025914 | Bacteria | 10188 |
| 124 | Ga0207671_10018927 | 3300025914 | Bacteria | 5275 |
| 125 | Ga0207657_10083539 | 3300025919 | Bacteria | 2679 |
| 126 | Ga0207652_10037177 | 3300025921 | Bacteria | 4120 |
| 127 | Ga0207681_10018326 | 3300025923 | Unclassified | 4411 |
| 128 | Ga0207687_10042550 | 3300025927 | Bacteria | 3126 |
| 129 | Ga0207644_10088544 | 3300025931 | Bacteria | 2303 |
| 130 | Ga0207706_10000538 | 3300025933 | Bacteria | 40240 |
| 131 | Ga0207709_10000298 | 3300025935 | Bacteria | 54908 |
| 132 | Ga0207704_10000056 | 3300025938 | Bacteria | 78848 |
| 133 | Ga0207689_10005393 | 3300025942 | Bacteria | 11445 |
| 134 | Ga0207667_10007158 | 3300025949 | Bacteria | 13470 |
| 135 | Ga0207667_10045987 | 3300025949 | Bacteria | 4622 |
| 136 | Ga0207667_10064864 | 3300025949 | Bacteria | 3811 |
| 137 | Ga0207651_10074913 | 3300025960 | Bacteria | 2412 |
| 138 | Ga0207712_10012167 | 3300025961 | Bacteria | 5497 |
| 139 | Ga0207677_10006837 | 3300026023 | Bacteria | 6265 |
| 140 | Ga0207677_10011564 | 3300026023 | Bacteria | 5039 |
| 141 | Ga0207703_10002062 | 3300026035 | Bacteria | 17715 |
| 142 | Ga0207678_10015535 | 3300026067 | Bacteria | 6694 |
| 143 | Ga0207702_10042179 | 3300026078 | Bacteria | 3827 |
| 144 | Ga0207641_10000089 | 3300026088 | Bacteria | 128603 |
| 145 | Ga0207641_10025529 | 3300026088 | Bacteria | 4873 |
| 146 | Ga0207648_10000738 | 3300026089 | Bacteria | 36673 |
| 147 | Ga0207648_10008992 | 3300026089 | Bacteria | 9606 |
| 148 | Ga0207676_10031155 | 3300026095 | Bacteria | 4009 |
| 149 | Ga0207676_10103056 | 3300026095 | Bacteria | 2370 |
| 150 | Ga0207674_10058622 | 3300026116 | Bacteria | 3899 |
| 151 | Ga0207675_100143897 | 3300026118 | Bacteria | 2266 |
| 152 | Ga0207683_10011911 | 3300026121 | Bacteria | 7421 |
| 153 | Ga0207698_10015531 | 3300026142 | Bacteria | 5101 |
| 154 | Ga0268264_10001140 | 3300028381 | Bacteria | 26028 |
| 155 | Ga0268264_10002918 | 3300028381 | Bacteria | 14857 |
| 156 | Ga0268264_10034242 | 3300028381 | Bacteria | 4177 |
| 157 | Ga0307515_10000015 | 3300028794 | Bacteria | 557886 |
| 158 | Ga0307515_10000076 | 3300028794 | Bacteria | 228736 |
| 159 | Ga0265338_10077349 | 3300028800 | Bacteria | 2813 |
| 160 | Ga0265342_10016824 | 3300031712 | Unclassified | 4768 |
| 161 | Ga0307407_10000004 | 3300031903 | Bacteria | 240912 |
| 162 | Ga0307407_10000028 | 3300031903 | Bacteria | 105575 |
| 163 | Ga0307416_100000009 | 3300032002 | Bacteria | 374271 |
| 164 | Ga0307416_100000011 | 3300032002 | Bacteria | 300622 |
| 165 | Ga0307414_10000529 | 3300032004 | Bacteria | 19834 |
| 166 | Ga0307414_10025818 | 3300032004 | Bacteria | 3770 |
| 167 | Ga0307414_10039984 | 3300032004 | Bacteria | 3164 |
| 168 | Ga0307414_10065662 | 3300032004 | Bacteria | 2590 |
| 169 | Ga0373940_0004880 | 3300035088 | Bacteria | 2864 |
| 170 | Ga0373939_0000104 | 3300035114 | Bacteria | 26069 |
| 171 | Ga0373960_0001065 | 3300035121 | Bacteria | 5911 |
| 172 | Ga0373961_0005993 | 3300035241 | Bacteria | 2919 |
| 173 | Ga0373931_0000925 | 3300035691 | Bacteria | 12354 |
| 174 | Ga0395899_0000001 | 3300037312 | Bacteria | 1750322 |
| 175 | Ga0395899_0000339 | 3300037312 | Bacteria | 58722 |
| 176 | Ga0395899_0000474 | 3300037312 | Bacteria | 45411 |
| 177 | Ga0395900_0000413 | 3300037418 | Bacteria | 61555 |
| 178 | Ga0395898_0085898 | 3300037466 | Bacteria | 3033 |
| 179 | Ga0395905_0000188 | 3300037471 | Bacteria | 98070 |
| 180 | Ga0395901_0000611 | 3300038443 | Bacteria | 41511 |
| 181 | Ga0395901_0143951 | 3300038443 | Bacteria | 2506 |
| 182 | Ga0436361_0746278 | 3300039447 | Bacteria | 8494 |
| 183 | Ga0439439_0003518 | 3300041406 | Bacteria | 3461 |
| 184 | Ga0439457_001861 | 3300042014 | Bacteria | 6233 |
| 185 | Ga0439457_002694 | 3300042014 | Bacteria | 5004 |
| 186 | Ga0466969_0000446 | 3300044656 | Bacteria | 22599 |
| 187 | Ga0466972_0000003 | 3300044658 | Bacteria | 391452 |
| 188 | Ga0466972_0000089 | 3300044658 | Bacteria | 82556 |
| 189 | Ga0466972_0032011 | 3300044658 | Bacteria | 2584 |
| 190 | Ga0466966_0000204 | 3300044684 | Bacteria | 39652 |
| 191 | Ga0466966_0037407 | 3300044684 | Bacteria | 3130 |
| 192 | Ga0466964_0009638 | 3300044706 | Bacteria | 3638 |
| 193 | Ga0466968_0074639 | 3300044735 | Bacteria | 1481 |
| 194 | Ga0466970_0000829 | 3300044765 | Bacteria | 14860 |
| 195 | Ga0466957_0001736 | 3300044842 | Bacteria | 11474 |
| 196 | Ga0466957_0010380 | 3300044842 | Bacteria | 5343 |
| 197 | Ga0466959_0000008 | 3300045049 | Bacteria | 179537 |
| 198 | Ga0466959_0000253 | 3300045049 | Bacteria | 32783 |
| 199 | Ga0451576_0081081 | 3300045051 | Bacteria | 3375 |
| 200 | Ga0495650_0000144 | 3300046471 | Bacteria | 165957 |
| 201 | Ga0495610_0001428 | 3300046512 | Bacteria | 21136 |
| 202 | Ga0495633_0000017 | 3300046558 | Bacteria | 249973 |
| 203 | Ga0495668_0002294 | 3300046616 | Bacteria | 16073 |
| 204 | Ga0495625_0000059 | 3300046660 | Bacteria | 180330 |
| 205 | Ga0495625_0130995 | 3300046660 | Bacteria | 1699 |
| 206 | Ga0495661_0022338 | 3300046665 | Bacteria | 4116 |
| 207 | Ga0495649_0000031 | 3300046694 | Bacteria | 151547 |
| 208 | Ga0495649_0043297 | 3300046694 | Bacteria | 2458 |
| 209 | Ga0495673_0022625 | 3300047469 | Bacteria | 3077 |
| 210 | Ga0501032_0025793 | 3300049569 | Bacteria | 4050 |
| 211 | Ga0501038_0000622 | 3300049574 | Bacteria | 31612 |
| 212 | Ga0501047_0014955 | 3300049581 | Bacteria | 7385 |
| 213 | Ga0501047_0072770 | 3300049581 | Bacteria | 3308 |
| 214 | Ga0501249_000001 | 3300049679 | Bacteria | 268580 |
| 215 | Ga0501225_0000671 | 3300049705 | Bacteria | 10681 |
| 216 | Ga0501044_0022964 | 3300049823 | Bacteria | 6640 |
| 217 | nmdc:mga05p37_2337_c1 | 3300050507 | Bacteria | 9660 |
| 218 | nmdc:mga05p37_3111_c1 | 3300050507 | Bacteria | 19291 |
| 219 | nmdc:mga05p37_76537_c1 | 3300050507 | Bacteria | 4119 |
| 220 | Ga0500578_0000014 | 3300053086 | Bacteria | 185676 |
| 221 | Ga0500644_0000105 | 3300053088 | Bacteria | 53242 |
| 222 | Ga0500583_0000005 | 3300053092 | Bacteria | 166480 |
| 223 | Ga0500583_0001107 | 3300053092 | Bacteria | 7688 |
| 224 | Ga0500651_0016477 | 3300053093 | Bacteria | 4547 |
| 225 | Ga0500652_007131 | 3300053131 | Bacteria | 3640 |
| 226 | Ga0500658_0000017 | 3300053134 | Bacteria | 142994 |
| 227 | Ga0500622_0076374 | 3300053156 | Bacteria | 1684 |
| 228 | Ga0500636_0012680 | 3300053177 | Bacteria | 4941 |
| 229 | 2513233809 | 2513020052 | Bacteria | 5120511 |
| 230 | 2738730128 | 2738541278 | Bacteria | 9755573 |
| 231 | 2819577459 | 2818991442 | Bacteria | 8318214 |
| 232 | 2849284444 | 2849281842 | Bacteria | 6065644 |
| 233 | 2857630881 | 2857627736 | Bacteria | 5625397 |
| 234 | 2919686683 | 2919683626 | Bacteria | 5534354 |
| 235 | 2958512148 | 2958512119 | Bacteria | 4528530 |
| 236 | 8055596395 | 8055592153 | Bacteria | 5961247 |
| 237 | Ga0453684_0005531 | |||
| 238 | JGI24746J21847_1000317 | |||
| 239 | JGI24737J22298_10011877 | |||
| 240 | JGI25162J39368_1000204 | |||
| 241 | JGI25154J39366_1000157 | |||
| 242 | rootH1_10005956 | |||
| 243 | rootH1_10113431 | |||
| 244 | rootH2_10001405 | |||
| 245 | rootH2_10032558 | |||
| 246 | rootH2_10049696 | |||
| 247 | rootL2_10189367 | |||
| 248 | rootH1_10003071 | |||
| 249 | rootH1_10015943 | |||
| 250 | Ga0070666_10000130 | |||
| 251 | Ga0070680_100133258 | |||
| 252 | Ga0068868_100014262 | |||
| 253 | Ga0068868_100035689 | |||
| 254 | Ga0070660_100074448 | |||
| 255 | Ga0070673_100011689 | |||
| 256 | Ga0070667_100007587 | |||
| 257 | Ga0070663_100030518 | |||
| 258 | Ga0070678_100003639 | |||
| 259 | Ga0070662_100000145 | |||
| 260 | Ga0068867_100006603 | |||
| 261 | Ga0070679_100020884 | |||
| 262 | Ga0070679_100029771 | |||
| 263 | Ga0068855_100000339 | |||
| 264 | Ga0068855_100008709 | |||
| 265 | Ga0068855_100031918 | |||
| 266 | Ga0068856_100007449 | |||
| 267 | Ga0068852_100000735 | |||
| 268 | Ga0068852_100020304 | |||
| 269 | Ga0068859_100000245 | |||
| 270 | Ga0068859_100015600 | |||
| 271 | Ga0068859_100044247 | |||
| 272 | Ga0068859_100046074 | |||
| 273 | Ga0068864_100043953 | |||
| 274 | Ga0068863_100012027 | |||
| 275 | Ga0068863_100024427 | |||
| 276 | Ga0068863_100120578 | |||
| 277 | Ga0068858_100003368 | |||
| 278 | Ga0068858_100005732 | |||
| 279 | Ga0068860_100000788 | |||
| 280 | Ga0068860_100001305 | |||
| 281 | Ga0068860_100068382 | |||
| 282 | Ga0068860_100072852 | |||
| 283 | Ga0068871_100000037 | |||
| 284 | Ga0068865_100000067 | |||
| 285 | Ga0097620_100000245 | |||
| 286 | Ga0097620_100015600 | |||
| 287 | Ga0097620_100044243 | |||
| 288 | Ga0097620_100046082 | |||
| 289 | Ga0105240_10029281 | |||
| 290 | Ga0105245_10066079 | |||
| 291 | Ga0105247_10000259 | |||
| 292 | Ga0105247_10015429 | |||
| 293 | Ga0114129_10000724 | |||
| 294 | Ga0114129_10020262 | |||
| 295 | Ga0105243_10005724 | |||
| 296 | Ga0105241_10000251 | |||
| 297 | Ga0105241_10002828 | |||
| 298 | Ga0105241_10012931 | |||
| 299 | Ga0105241_10038584 | |||
| 300 | Ga0105242_10011442 | |||
| 301 | Ga0105237_10001623 | |||
| 302 | Ga0105237_10001677 | |||
| 303 | Ga0105237_10023090 | |||
| 304 | Ga0105237_10036541 | |||
| 305 | Ga0105237_10048933 | |||
| 306 | Ga0105238_10015735 | |||
| 307 | Ga0105249_10001614 | |||
| 308 | Ga0105249_10002010 | |||
| 309 | Ga0105249_10217713 | |||
| 310 | Ga0105239_10000004 | |||
| 311 | Ga0105239_10215925 | |||
| 312 | Ga0157373_10000013 | |||
| 313 | Ga0157373_10008476 | |||
| 314 | Ga0157373_10049591 | |||
| 315 | Ga0157373_10050434 | |||
| 316 | Ga0157371_10000016 | |||
| 317 | Ga0157370_10007114 | |||
| 318 | Ga0157370_10024449 | |||
| 319 | Ga0157370_10079366 | |||
| 320 | Ga0157370_10095207 | |||
| 321 | Ga0157369_10000005 | |||
| 322 | Ga0157369_10000007 | |||
| 323 | Ga0157369_10002667 | |||
| 324 | Ga0157374_10000418 | |||
| 325 | Ga0157378_10004664 | |||
| 326 | Ga0157378_10005414 | |||
| 327 | Ga0157378_10018263 | |||
| 328 | Ga0163162_10000709 | |||
| 329 | Ga0157372_10000016 | |||
| 330 | Ga0157372_10001765 | |||
| 331 | Ga0157372_10020008 | |||
| 332 | Ga0157372_10027288 | |||
| 333 | Ga0157379_10096057 | |||
| 334 | Ga0157376_10021206 | |||
| 335 | Ga0182007_10000006 | |||
| 336 | Ga0183373_1001 | |||
| 337 | Ga0163161_10001934 | |||
| 338 | Ga0206351_10543673 | |||
| 339 | Ga0213872_10020681 | |||
| 340 | Ga0207427_100223 | |||
| 341 | Ga0209437_100164 | |||
| 342 | Ga0209646_1000003 | |||
| 343 | Ga0209026_1000473 | |||
| 344 | Ga0209233_1000242 | |||
| 345 | Ga0209758_1017909 | |||
| 346 | Ga0207426_1000187 | |||
| 347 | Ga0207710_10000244 | |||
| 348 | Ga0207710_10010337 | |||
| 349 | Ga0207680_10000090 | |||
| 350 | Ga0207647_10000302 | |||
| 351 | Ga0207645_10000067 | |||
| 352 | Ga0207654_10001052 | |||
| 353 | Ga0207654_10001422 | |||
| 354 | Ga0207654_10008277 | |||
| 355 | Ga0207695_10001921 | |||
| 356 | Ga0207671_10000907 | |||
| 357 | Ga0207671_10006718 | |||
| 358 | Ga0207671_10018927 | |||
| 359 | Ga0207657_10083539 | |||
| 360 | Ga0207652_10037177 | |||
| 361 | Ga0207681_10018326 | |||
| 362 | Ga0207687_10042550 | |||
| 363 | Ga0207644_10088544 | |||
| 364 | Ga0207706_10000538 | |||
| 365 | Ga0207709_10000298 | |||
| 366 | Ga0207704_10000056 | |||
| 367 | Ga0207689_10005393 | |||
| 368 | Ga0207667_10007158 | |||
| 369 | Ga0207667_10045987 | |||
| 370 | Ga0207667_10064864 | |||
| 371 | Ga0207651_10074913 | |||
| 372 | Ga0207712_10012167 | |||
| 373 | Ga0207677_10006837 | |||
| 374 | Ga0207677_10011564 | |||
| 375 | Ga0207703_10002062 | |||
| 376 | Ga0207678_10015535 | |||
| 377 | Ga0207702_10042179 | |||
| 378 | Ga0207641_10000089 | |||
| 379 | Ga0207641_10025529 | |||
| 380 | Ga0207648_10000738 | |||
| 381 | Ga0207648_10008992 | |||
| 382 | Ga0207676_10031155 | |||
| 383 | Ga0207676_10103056 | |||
| 384 | Ga0207674_10058622 | |||
| 385 | Ga0207675_100143897 | |||
| 386 | Ga0207683_10011911 | |||
| 387 | Ga0207698_10015531 | |||
| 388 | Ga0268264_10001140 | |||
| 389 | Ga0268264_10002918 | |||
| 390 | Ga0268264_10034242 | |||
| 391 | Ga0307515_10000015 | |||
| 392 | Ga0307515_10000076 | |||
| 393 | Ga0265338_10077349 | |||
| 394 | Ga0265342_10016824 | |||
| 395 | Ga0307407_10000004 | |||
| 396 | Ga0307407_10000028 | |||
| 397 | Ga0307416_100000009 | |||
| 398 | Ga0307416_100000011 | |||
| 399 | Ga0307414_10000529 | |||
| 400 | Ga0307414_10025818 | |||
| 401 | Ga0307414_10039984 | |||
| 402 | Ga0307414_10065662 | |||
| 403 | Ga0373940_0004880 | |||
| 404 | Ga0373939_0000104 | |||
| 405 | Ga0373960_0001065 | |||
| 406 | Ga0373961_0005993 | |||
| 407 | Ga0373931_0000925 | |||
| 408 | Ga0395899_0000001 | |||
| 409 | Ga0395899_0000339 | |||
| 410 | Ga0395899_0000474 | |||
| 411 | Ga0395900_0000413 | |||
| 412 | Ga0395898_0085898 | |||
| 413 | Ga0395905_0000188 | |||
| 414 | Ga0395901_0000611 | |||
| 415 | Ga0395901_0143951 | |||
| 416 | Ga0436361_0746278 | |||
| 417 | Ga0439439_0003518 | |||
| 418 | Ga0439457_001861 | |||
| 419 | Ga0439457_002694 | |||
| 420 | Ga0466969_0000446 | |||
| 421 | Ga0466972_0000003 | |||
| 422 | Ga0466972_0000089 | |||
| 423 | Ga0466972_0032011 | |||
| 424 | Ga0466966_0000204 | |||
| 425 | Ga0466966_0037407 | |||
| 426 | Ga0466964_0009638 | |||
| 427 | Ga0466968_0074639 | |||
| 428 | Ga0466970_0000829 | |||
| 429 | Ga0466957_0001736 | |||
| 430 | Ga0466957_0010380 | |||
| 431 | Ga0466959_0000008 | |||
| 432 | Ga0466959_0000253 | |||
| 433 | Ga0451576_0081081 | |||
| 434 | Ga0495650_0000144 | |||
| 435 | Ga0495610_0001428 | |||
| 436 | Ga0495633_0000017 | |||
| 437 | Ga0495668_0002294 | |||
| 438 | Ga0495625_0000059 | |||
| 439 | Ga0495625_0130995 | |||
| 440 | Ga0495661_0022338 | |||
| 441 | Ga0495649_0000031 | |||
| 442 | Ga0495649_0043297 | |||
| 443 | Ga0495673_0022625 | |||
| 444 | Ga0501032_0025793 | |||
| 445 | Ga0501038_0000622 | |||
| 446 | Ga0501047_0014955 | |||
| 447 | Ga0501047_0072770 | |||
| 448 | Ga0501249_000001 | |||
| 449 | Ga0501225_0000671 | |||
| 450 | Ga0501044_0022964 | |||
| 451 | nmdc:mga05p37_2337_c1 | |||
| 452 | nmdc:mga05p37_3111_c1 | |||
| 453 | nmdc:mga05p37_76537_c1 | |||
| 454 | Ga0500578_0000014 | |||
| 455 | Ga0500644_0000105 | |||
| 456 | Ga0500583_0000005 | |||
| 457 | Ga0500583_0001107 | |||
| 458 | Ga0500651_0016477 | |||
| 459 | Ga0500652_007131 | |||
| 460 | Ga0500658_0000017 | |||
| 461 | Ga0500622_0076374 | |||
| 462 | Ga0500636_0012680 | |||
| 463 | 2513233809 | |||
| 464 | 2738730128 | |||
| 465 | 2819577459 | |||
| 466 | 2849284444 | |||
| 467 | 2857630881 | |||
| 468 | 2919686683 | |||
| 469 | 2958512148 | |||
| 470 | 8055596395 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7lnp-assembly3.cif.gz_D | structure of the exo-alpha-l-galactosidase bpgh29 (d264n mutant) from bacteroides plebeius in complex with paranitrophenyl-alpha-l-galactopyranoside | 0.9031 | 46 | 551 |
| 7lnp-assembly4.cif.gz_E | structure of the exo-alpha-l-galactosidase bpgh29 (d264n mutant) from bacteroides plebeius in complex with paranitrophenyl-alpha-l-galactopyranoside | 0.8969 | 46 | 551 |
| 7ljj-assembly1.cif.gz_A | structure of the exo-alpha-l-galactosidase bpgh29 from bacteroides plebeius | 0.8876 | 46 | 551 |
| 7lnp-assembly2.cif.gz_C | structure of the exo-alpha-l-galactosidase bpgh29 (d264n mutant) from bacteroides plebeius in complex with paranitrophenyl-alpha-l-galactopyranoside | 0.8834 | 36 | 551 |
| 7lk7-assembly1.cif.gz_A | structure of the exo-alpha-l-galactosidase bpgh29 from bacteroides plebeius in complex with l-galactose | 0.883 | 44 | 551 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q551C1_18_358_3.20.20.80 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases | 0.8411 | 45 | 433 | 3.20.20.80 |
| af_Q551C1_18_358_3.20.20.80 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases | 0.8269 | 45 | 433 | 3.20.20.80 |
| 1hl9B01 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases | 0.8201 | 47 | 437 | 3.20.20.80 |
| 4pspA01 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases | 0.8186 | 45 | 437 | 3.20.20.80 |
| af_P04066_33_365_3.20.20.80 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases | 0.8175 | 43 | 432 | 3.20.20.80 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-W4UUW8-F1-model_v4 | Alpha-L-fucosidase | 0.9783 | 43 | 349 |
GO:0004560
GO:0005764 GO:0006004 GO:0016139 |
| AF-A0A4Q5NRF1-F1-model_v4 | LamG-like jellyroll fold domain-containing protein | 0.973 | 30 | 551 |
GO:0004560
GO:0005764 GO:0006004 GO:0016139 |
| AF-K1U5G3-F1-model_v4 | Alpha-L-fucosidase | 0.9716 | 40 | 423 |
GO:0004560
GO:0005764 GO:0006004 GO:0016139 |
| AF-K1SS46-F1-model_v4 | Alpha-L-fucosidase | 0.9644 | 69 | 203 |
GO:0004560
GO:0005764 GO:0006004 GO:0016139 |
| AF-A0A521ZC36-F1-model_v4 | Alpha-L-fucosidase | 0.9635 | 74 | 551 |
GO:0004560
GO:0005764 GO:0006004 GO:0016139 |