F353688

General Info

Members Datasets Scaffolds Average Seq Length
241 166 482 212

Family's Representative Sequence

Representative Sequence 3300006871|Ga0075434_100162487|Ga0075434_1001624872
Length 252
Sequence LGPRERREXXXEEIRTRILDAARELFVAEGYEAVTMRRVAEKIEYSPTAIYFHFRDKETLLREICDADFLTLAHEIAGVAEIADPVERLRAIGLAYFHFGMRYPNHYRLMFMTPHPPLGDDHEIERGNPEEDAYAFLRSLVADAIAKGHFREEVTDIDLAAQTMWAGMHGVISLHIAKCNDDWVDWRPLEARAELMNETLLNGLLAPHPPSGHLLPASGEKDSRSAVDTSAPRPAKRGEGGRRPGEGSTDGR

Samples

Sample ID Description Type Environment
1 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
75 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
113 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
114 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
115 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
116 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
119 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
122 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
127 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
130 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
131 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
132 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
136 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
137 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
138 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
139 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
140 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
141 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
142 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
143 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
151 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
157 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
160 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
163 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
164 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
165 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
166 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.66
Nodule 0
Rhizoplane 0.83
Rhizosphere 95.02
Stem 0
Stem Tuber 0
Unclassified 14.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075434_100162487 3300006871 Bacteria 2253
2 Ga0065715_10230204 3300005293 Bacteria 1237
3 Ga0065707_10200442 3300005295 Bacteria 1297
4 Ga0070676_10120316 3300005328 Bacteria 1647
5 Ga0070670_100378782 3300005331 Unclassified 1246
6 Ga0070677_10061166 3300005333 Unclassified 1554
7 Ga0070666_10205100 3300005335 Bacteria 1387
8 Ga0070680_100046700 3300005336 Bacteria 3524
9 Ga0068868_100534873 3300005338 Bacteria 1031
10 Ga0070660_100475077 3300005339 Unclassified 1039
11 Ga0070689_100077778 3300005340 Bacteria 2600
12 Ga0070689_100174826 3300005340 Bacteria 1741
13 Ga0070687_100275407 3300005343 Bacteria 1057
14 Ga0070668_100365501 3300005347 Unclassified 1224
15 Ga0070669_100195365 3300005353 Bacteria 1589
16 Ga0070675_100000004 3300005354 Bacteria 361974
17 Ga0070675_100010194 3300005354 Bacteria 7330
18 Ga0070673_100193254 3300005364 Bacteria 1749
19 Ga0070659_100106351 3300005366 Unclassified 2262
20 Ga0070667_100080646 3300005367 Bacteria 2784
21 Ga0070667_100257920 3300005367 Bacteria 1560
22 Ga0070709_10000149 3300005434 Bacteria 45901
23 Ga0070709_10104729 3300005434 Bacteria 1891
24 Ga0070714_100223351 3300005435 Unclassified 1732
25 Ga0070713_100000326 3300005436 Bacteria 31172
26 Ga0070713_100006564 3300005436 Bacteria 8082
27 Ga0070713_100694282 3300005436 Unclassified 971
28 Ga0070710_10194167 3300005437 Unclassified 1278
29 Ga0070711_100146360 3300005439 Bacteria 1777
30 Ga0070711_100162077 3300005439 Bacteria 1696
31 Ga0070700_100000086 3300005441 Bacteria 62330
32 Ga0070694_100162289 3300005444 Bacteria 1641
33 Ga0070708_100238498 3300005445 Bacteria 1707
34 Ga0070708_101234068 3300005445 Unclassified 699
35 Ga0070662_100204207 3300005457 Unclassified 1569
36 Ga0068867_100006686 3300005459 Bacteria 8154
37 Ga0068867_100029091 3300005459 Bacteria 3981
38 Ga0070706_100000481 3300005467 Bacteria 47072
39 Ga0070707_100011657 3300005468 Bacteria 8202
40 Ga0070707_100564544 3300005468 Bacteria 1100
41 Ga0070698_100216646 3300005471 Bacteria 1849
42 Ga0070699_100084670 3300005518 Bacteria 2767
43 Ga0070699_100215469 3300005518 Bacteria 1710
44 Ga0070699_100897036 3300005518 Unclassified 812
45 Ga0070684_100039982 3300005535 Bacteria 4035
46 Ga0070697_100019740 3300005536 Bacteria 5325
47 Ga0070697_100418928 3300005536 Bacteria 1164
48 Ga0070672_100055604 3300005543 Bacteria 3101
49 Ga0070665_100006022 3300005548 Bacteria 12393
50 Ga0068852_100416843 3300005616 Unclassified 1324
51 Ga0068859_100033531 3300005617 Bacteria 5156
52 Ga0068859_100291140 3300005617 Bacteria 1726
53 Ga0068859_100443261 3300005617 Unclassified 1395
54 Ga0068864_100034692 3300005618 Bacteria 4292
55 Ga0068861_100002881 3300005719 Bacteria 11335
56 Ga0068861_100092427 3300005719 Bacteria 2390
57 Ga0068870_10017411 3300005840 Bacteria 3451
58 Ga0068863_100031211 3300005841 Bacteria 5086
59 Ga0068863_100041549 3300005841 Bacteria 4373
60 Ga0068863_100199426 3300005841 Bacteria 1925
61 Ga0068863_100321724 3300005841 Unclassified 1502
62 Ga0068858_100130540 3300005842 Unclassified 2356
63 Ga0068860_100013839 3300005843 Bacteria 7910
64 Ga0068862_100000997 3300005844 Bacteria 27086
65 Ga0068862_100037951 3300005844 Bacteria 4084
66 Ga0081455_10110134 3300005937 Bacteria 2190
67 Ga0081539_10115749 3300005985 Bacteria 1340
68 Ga0070712_100002081 3300006175 Bacteria 12287
69 Ga0075366_10216640 3300006195 Bacteria 1166
70 Ga0097621_100053457 3300006237 Bacteria 3292
71 Ga0068871_100623333 3300006358 Bacteria 982
72 Ga0075428_100053365 3300006844 Bacteria 4429
73 Ga0075430_100040547 3300006846 Bacteria 3941
74 Ga0075430_100377980 3300006846 Bacteria 1169
75 Ga0075431_100012193 3300006847 Bacteria 8675
76 Ga0075431_100693153 3300006847 Unclassified 997
77 Ga0075433_10737606 3300006852 Bacteria 862
78 Ga0075434_100014915 3300006871 Bacteria 7435
79 Ga0075429_100383460 3300006880 Bacteria 1231
80 Ga0068865_100034295 3300006881 Unclassified 3404
81 Ga0097620_100000108 3300006931 Bacteria 77862
82 Ga0097620_100033531 3300006931 Bacteria 5156
83 Ga0097620_100291155 3300006931 Bacteria 1726
84 Ga0097620_100443213 3300006931 Unclassified 1395
85 Ga0075435_100046089 3300007076 Bacteria 3496
86 Ga0075435_100135201 3300007076 Bacteria 2065
87 Ga0105244_10027528 3300009036 Bacteria 3062
88 Ga0111539_10133460 3300009094 Bacteria 2907
89 Ga0105245_10001376 3300009098 Bacteria 22013
90 Ga0105245_10636029 3300009098 Bacteria 1096
91 Ga0105247_10010142 3300009101 Bacteria 5707
92 Ga0114129_10077767 3300009147 Bacteria 4615
93 Ga0114129_10401919 3300009147 Bacteria 1805
94 Ga0114129_10755546 3300009147 Bacteria 1244
95 Ga0105242_10005659 3300009176 Bacteria 9645
96 Ga0105248_10263528 3300009177 Bacteria 1940
97 Ga0157378_10285595 3300013297 Bacteria 1592
98 Ga0163162_10038489 3300013306 Bacteria 4773
99 Ga0157372_10470321 3300013307 Bacteria 1465
100 Ga0163163_10008057 3300014325 Bacteria 9334
101 Ga0163163_10020429 3300014325 Bacteria 6235
102 Ga0157380_10007915 3300014326 Bacteria 7564
103 Ga0182008_10009833 3300014497 Bacteria 5143
104 Ga0157379_10220779 3300014968 Bacteria 1717
105 Ga0182007_10010130 3300015262 Bacteria 3744
106 Ga0207697_10006214 3300025315 Bacteria 5431
107 Ga0207682_10000610 3300025893 Bacteria 16622
108 Ga0207692_10161690 3300025898 Unclassified 1291
109 Ga0207680_10136506 3300025903 Bacteria 1622
110 Ga0207647_10048368 3300025904 Bacteria 2641
111 Ga0207699_10000892 3300025906 Bacteria 14260
112 Ga0207645_10028182 3300025907 Bacteria 3627
113 Ga0207645_10106020 3300025907 Bacteria 1817
114 Ga0207643_10028597 3300025908 Bacteria 3097
115 Ga0207684_10000239 3300025910 Bacteria 82378
116 Ga0207693_10000089 3300025915 Bacteria 81143
117 Ga0207663_10088217 3300025916 Unclassified 2051
118 Ga0207660_10015660 3300025917 Bacteria 5007
119 Ga0207662_10211429 3300025918 Bacteria 1259
120 Ga0207646_10092413 3300025922 Bacteria 2708
121 Ga0207646_10103864 3300025922 Bacteria 2548
122 Ga0207646_10245876 3300025922 Bacteria 1616
123 Ga0207650_10201178 3300025925 Unclassified 1596
124 Ga0207659_10000002 3300025926 Bacteria 619441
125 Ga0207659_10031704 3300025926 Bacteria 3621
126 Ga0207687_10000235 3300025927 Bacteria 37735
127 Ga0207687_10486199 3300025927 Bacteria 1028
128 Ga0207700_10000507 3300025928 Bacteria 22859
129 Ga0207700_10274297 3300025928 Unclassified 1448
130 Ga0207690_10284749 3300025932 Unclassified 1288
131 Ga0207670_10365943 3300025936 Bacteria 1145
132 Ga0207670_10512362 3300025936 Unclassified 976
133 Ga0207669_10115083 3300025937 Unclassified 1812
134 Ga0207704_10048393 3300025938 Unclassified 2549
135 Ga0207665_10013904 3300025939 Bacteria 5294
136 Ga0207691_10001054 3300025940 Bacteria 27388
137 Ga0207711_10793637 3300025941 Bacteria 882
138 Ga0207689_10030313 3300025942 Bacteria 4508
139 Ga0207689_10150356 3300025942 Bacteria 1919
140 Ga0207658_10059056 3300025986 Bacteria 2857
141 Ga0207658_10397282 3300025986 Bacteria 1211
142 Ga0207677_10488831 3300026023 Bacteria 1062
143 Ga0207708_10000035 3300026075 Bacteria 140227
144 Ga0207708_10010264 3300026075 Bacteria 6954
145 Ga0207641_10006428 3300026088 Bacteria 9904
146 Ga0207641_10078106 3300026088 Bacteria 2866
147 Ga0207648_10007393 3300026089 Bacteria 10812
148 Ga0207648_10040104 3300026089 Bacteria 4115
149 Ga0207676_10155969 3300026095 Bacteria 1972
150 Ga0207675_100006333 3300026118 Bacteria 11221
151 Ga0207675_100284417 3300026118 Bacteria 1607
152 Ga0207428_10716247 3300027907 Unclassified 715
153 Ga0268266_10046635 3300028379 Bacteria 3710
154 Ga0268265_10000712 3300028380 Bacteria 32721
155 Ga0268265_10085766 3300028380 Bacteria 2500
156 Ga0268264_10116603 3300028381 Bacteria 2348
157 Ga0265328_10034916 3300031239 Bacteria 1860
158 Ga0265339_10122258 3300031249 Bacteria 1337
159 Ga0265331_10002397 3300031250 Bacteria 12705
160 Ga0265331_10002681 3300031250 Bacteria 11872
161 Ga0265331_10018558 3300031250 Bacteria 3605
162 Ga0265331_10032374 3300031250 Bacteria 2591
163 Ga0265327_10000213 3300031251 Bacteria 121151
164 Ga0265327_10000307 3300031251 Bacteria 95145
165 Ga0307509_10427963 3300031507 Bacteria 1023
166 Ga0265314_10148744 3300031711 Bacteria 1439
167 Ga0265342_10098877 3300031712 Bacteria 1665
168 Ga0307516_10469262 3300031730 Bacteria 914
169 Ga0307416_100920141 3300032002 Bacteria 975
170 Ga0307416_101551698 3300032002 Bacteria 768
171 Ga0373932_0003279 3300035112 Bacteria 3911
172 Ga0373927_0000254 3300035695 Bacteria 41888
173 Ga0373937_0321947 3300036401 Bacteria 1463
174 Ga0373925_0285469 3300037068 Bacteria 1330
175 Ga0373925_0495397 3300037068 Bacteria 1003
176 Ga0373925_0713881 3300037068 Bacteria 827
177 Ga0395901_0696546 3300038443 Bacteria 1014
178 Ga0400490_12640 3300038726 Bacteria 3256
179 Ga0400483_052486 3300039062 Bacteria 1955
180 Ga0436365_1137746 3300039437 Bacteria 7619
181 Ga0451853_2013911 3300041512 Unclassified 911
182 Ga0451577_0017374 3300042876 Bacteria 6648
183 Ga0451577_0125512 3300042876 Bacteria 2300
184 Ga0451577_0314861 3300042876 Unclassified 1419
185 Ga0451577_0374983 3300042876 Unclassified 1291
186 Ga0451577_0762727 3300042876 Unclassified 875
187 Ga0453683_0094180 3300044673 Bacteria 1879
188 Ga0453684_0000499 3300044712 Bacteria 153532
189 Ga0453684_0012004 3300044712 Bacteria 14405
190 Ga0453684_0044171 3300044712 Bacteria 5970
191 Ga0453684_0093575 3300044712 Bacteria 3701
192 Ga0453684_0109360 3300044712 Unclassified 3362
193 Ga0453684_0136650 3300044712 Bacteria 2934
194 Ga0453684_0383508 3300044712 Bacteria 1578
195 Ga0451576_0017618 3300045051 Bacteria 7850
196 Ga0451576_0115113 3300045051 Bacteria 2799
197 Ga0451576_0331595 3300045051 Bacteria 1592
198 Ga0451576_1006429 3300045051 Bacteria 873
199 Ga0451576_1855797 3300045051 Bacteria 622
200 Ga0495580_0000984 3300046472 Bacteria 25013
201 Ga0495580_0002582 3300046472 Bacteria 15752
202 Ga0495585_0130744 3300046492 Bacteria 1321
203 Ga0495620_0000769 3300046515 Bacteria 19669
204 Ga0495643_0000003 3300046522 Bacteria 571962
205 Ga0495665_0147228 3300046531 Bacteria 1230
206 Ga0495665_0215662 3300046531 Bacteria 993
207 Ga0495640_0335379 3300046533 Bacteria 935
208 Ga0495635_0119158 3300046663 Bacteria 1801
209 Ga0495647_0164461 3300046681 Bacteria 958
210 Ga0495674_0057938 3300047319 Bacteria 3389
211 Ga0495615_0089692 3300048090 Bacteria 855
212 Ga0496102_0160459 3300048905 Bacteria 2115
213 Ga0496106_0792508 3300048909 Bacteria 752
214 Ga0501034_0005360 3300049571 Bacteria 14041
215 Ga0501043_0036575 3300049579 Bacteria 3863
216 Ga0501047_0002381 3300049581 Bacteria 17984
217 Ga0501070_0805575 3300049586 Bacteria 737
218 Ga0501074_0087746 3300049590 Unclassified 2228
219 Ga0501076_0817489 3300049592 Bacteria 769
220 Ga0501044_0006978 3300049823 Bacteria 12427
221 nmdc:mga0k408_245478_c1 3300050493 Bacteria 1069
222 nmdc:mga05p37_329139_c1 3300050507 Bacteria 1805
223 nmdc:mga05p37_569238_c1 3300050507 Bacteria 1285
224 nmdc:mga05p37_722976_c1 3300050507 Bacteria 1102
225 nmdc:mga09592_15684_c1 3300050508 Bacteria 6190
226 nmdc:mga09592_36731_c1 3300050508 Bacteria 4105
227 nmdc:mga09592_565335_c1 3300050508 Bacteria 976
228 nmdc:mga0qj67_177600_c1 3300050509 Bacteria 1729
229 nmdc:mga0qj67_50732_c1 3300050509 Bacteria 3281
230 nmdc:mga06r32_148074_c1 3300050510 Bacteria 2325
231 nmdc:mga06r32_30483_c1 3300050510 Bacteria 5060
232 nmdc:mga08y16_47946_c1 3300050511 Bacteria 4471
233 nmdc:mga0n895_11190_c1 3300050512 Bacteria 7989
234 nmdc:mga0rr50_23373_c1 3300050513 Bacteria 4261
235 nmdc:mga0rr50_2409_c2 3300050513 Bacteria 3681
236 nmdc:mga0a205_679769_c1 3300050515 Bacteria 880
237 Ga0495612_0073115 3300053078 Bacteria 1432
238 Ga0495595_0005804 3300053084 Bacteria 4997
239 Ga0495619_0107012 3300053085 Bacteria 1907
240 Ga0500554_001828 3300053102 Unclassified 4107
241 Ga0500628_004297 3300053129 Unclassified 2353
242 Ga0075434_100162487
243 Ga0065715_10230204
244 Ga0065707_10200442
245 Ga0070676_10120316
246 Ga0070670_100378782
247 Ga0070677_10061166
248 Ga0070666_10205100
249 Ga0070680_100046700
250 Ga0068868_100534873
251 Ga0070660_100475077
252 Ga0070689_100077778
253 Ga0070689_100174826
254 Ga0070687_100275407
255 Ga0070668_100365501
256 Ga0070669_100195365
257 Ga0070675_100000004
258 Ga0070675_100010194
259 Ga0070673_100193254
260 Ga0070659_100106351
261 Ga0070667_100080646
262 Ga0070667_100257920
263 Ga0070709_10000149
264 Ga0070709_10104729
265 Ga0070714_100223351
266 Ga0070713_100000326
267 Ga0070713_100006564
268 Ga0070713_100694282
269 Ga0070710_10194167
270 Ga0070711_100146360
271 Ga0070711_100162077
272 Ga0070700_100000086
273 Ga0070694_100162289
274 Ga0070708_100238498
275 Ga0070708_101234068
276 Ga0070662_100204207
277 Ga0068867_100006686
278 Ga0068867_100029091
279 Ga0070706_100000481
280 Ga0070707_100011657
281 Ga0070707_100564544
282 Ga0070698_100216646
283 Ga0070699_100084670
284 Ga0070699_100215469
285 Ga0070699_100897036
286 Ga0070684_100039982
287 Ga0070697_100019740
288 Ga0070697_100418928
289 Ga0070672_100055604
290 Ga0070665_100006022
291 Ga0068852_100416843
292 Ga0068859_100033531
293 Ga0068859_100291140
294 Ga0068859_100443261
295 Ga0068864_100034692
296 Ga0068861_100002881
297 Ga0068861_100092427
298 Ga0068870_10017411
299 Ga0068863_100031211
300 Ga0068863_100041549
301 Ga0068863_100199426
302 Ga0068863_100321724
303 Ga0068858_100130540
304 Ga0068860_100013839
305 Ga0068862_100000997
306 Ga0068862_100037951
307 Ga0081455_10110134
308 Ga0081539_10115749
309 Ga0070712_100002081
310 Ga0075366_10216640
311 Ga0097621_100053457
312 Ga0068871_100623333
313 Ga0075428_100053365
314 Ga0075430_100040547
315 Ga0075430_100377980
316 Ga0075431_100012193
317 Ga0075431_100693153
318 Ga0075433_10737606
319 Ga0075434_100014915
320 Ga0075429_100383460
321 Ga0068865_100034295
322 Ga0097620_100000108
323 Ga0097620_100033531
324 Ga0097620_100291155
325 Ga0097620_100443213
326 Ga0075435_100046089
327 Ga0075435_100135201
328 Ga0105244_10027528
329 Ga0111539_10133460
330 Ga0105245_10001376
331 Ga0105245_10636029
332 Ga0105247_10010142
333 Ga0114129_10077767
334 Ga0114129_10401919
335 Ga0114129_10755546
336 Ga0105242_10005659
337 Ga0105248_10263528
338 Ga0157378_10285595
339 Ga0163162_10038489
340 Ga0157372_10470321
341 Ga0163163_10008057
342 Ga0163163_10020429
343 Ga0157380_10007915
344 Ga0182008_10009833
345 Ga0157379_10220779
346 Ga0182007_10010130
347 Ga0207697_10006214
348 Ga0207682_10000610
349 Ga0207692_10161690
350 Ga0207680_10136506
351 Ga0207647_10048368
352 Ga0207699_10000892
353 Ga0207645_10028182
354 Ga0207645_10106020
355 Ga0207643_10028597
356 Ga0207684_10000239
357 Ga0207693_10000089
358 Ga0207663_10088217
359 Ga0207660_10015660
360 Ga0207662_10211429
361 Ga0207646_10092413
362 Ga0207646_10103864
363 Ga0207646_10245876
364 Ga0207650_10201178
365 Ga0207659_10000002
366 Ga0207659_10031704
367 Ga0207687_10000235
368 Ga0207687_10486199
369 Ga0207700_10000507
370 Ga0207700_10274297
371 Ga0207690_10284749
372 Ga0207670_10365943
373 Ga0207670_10512362
374 Ga0207669_10115083
375 Ga0207704_10048393
376 Ga0207665_10013904
377 Ga0207691_10001054
378 Ga0207711_10793637
379 Ga0207689_10030313
380 Ga0207689_10150356
381 Ga0207658_10059056
382 Ga0207658_10397282
383 Ga0207677_10488831
384 Ga0207708_10000035
385 Ga0207708_10010264
386 Ga0207641_10006428
387 Ga0207641_10078106
388 Ga0207648_10007393
389 Ga0207648_10040104
390 Ga0207676_10155969
391 Ga0207675_100006333
392 Ga0207675_100284417
393 Ga0207428_10716247
394 Ga0268266_10046635
395 Ga0268265_10000712
396 Ga0268265_10085766
397 Ga0268264_10116603
398 Ga0265328_10034916
399 Ga0265339_10122258
400 Ga0265331_10002397
401 Ga0265331_10002681
402 Ga0265331_10018558
403 Ga0265331_10032374
404 Ga0265327_10000213
405 Ga0265327_10000307
406 Ga0307509_10427963
407 Ga0265314_10148744
408 Ga0265342_10098877
409 Ga0307516_10469262
410 Ga0307416_100920141
411 Ga0307416_101551698
412 Ga0373932_0003279
413 Ga0373927_0000254
414 Ga0373937_0321947
415 Ga0373925_0285469
416 Ga0373925_0495397
417 Ga0373925_0713881
418 Ga0395901_0696546
419 Ga0400490_12640
420 Ga0400483_052486
421 Ga0436365_1137746
422 Ga0451853_2013911
423 Ga0451577_0017374
424 Ga0451577_0125512
425 Ga0451577_0314861
426 Ga0451577_0374983
427 Ga0451577_0762727
428 Ga0453683_0094180
429 Ga0453684_0000499
430 Ga0453684_0012004
431 Ga0453684_0044171
432 Ga0453684_0093575
433 Ga0453684_0109360
434 Ga0453684_0136650
435 Ga0453684_0383508
436 Ga0451576_0017618
437 Ga0451576_0115113
438 Ga0451576_0331595
439 Ga0451576_1006429
440 Ga0451576_1855797
441 Ga0495580_0000984
442 Ga0495580_0002582
443 Ga0495585_0130744
444 Ga0495620_0000769
445 Ga0495643_0000003
446 Ga0495665_0147228
447 Ga0495665_0215662
448 Ga0495640_0335379
449 Ga0495635_0119158
450 Ga0495647_0164461
451 Ga0495674_0057938
452 Ga0495615_0089692
453 Ga0496102_0160459
454 Ga0496106_0792508
455 Ga0501034_0005360
456 Ga0501043_0036575
457 Ga0501047_0002381
458 Ga0501070_0805575
459 Ga0501074_0087746
460 Ga0501076_0817489
461 Ga0501044_0006978
462 nmdc:mga0k408_245478_c1
463 nmdc:mga05p37_329139_c1
464 nmdc:mga05p37_569238_c1
465 nmdc:mga05p37_722976_c1
466 nmdc:mga09592_15684_c1
467 nmdc:mga09592_36731_c1
468 nmdc:mga09592_565335_c1
469 nmdc:mga0qj67_177600_c1
470 nmdc:mga0qj67_50732_c1
471 nmdc:mga06r32_148074_c1
472 nmdc:mga06r32_30483_c1
473 nmdc:mga08y16_47946_c1
474 nmdc:mga0n895_11190_c1
475 nmdc:mga0rr50_23373_c1
476 nmdc:mga0rr50_2409_c2
477 nmdc:mga0a205_679769_c1
478 Ga0495612_0073115
479 Ga0495595_0005804
480 Ga0495619_0107012
481 Ga0500554_001828
482 Ga0500628_004297

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

18

64

0.98

PF13305

TetR_C_33

Tetracyclin repressor-like, C-terminal domain

89

199

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6azh-assembly1.cif.gz_B clostridium perfringens putative fatty acid metabolism regulator 0.8618 17 203
5gpa-assembly1.cif.gz_A structural analysis of fatty acid degradation regulator fadr from bacillus halodurans 0.8395 15 201
6azh-assembly1.cif.gz_B clostridium perfringens putative fatty acid metabolism regulator 0.8359 17 203
5gpc-assembly1.cif.gz_B structural analysis of fatty acid degradation regulator fadr from bacillus halodurans 0.833 15 204
2pz9-assembly1.cif.gz_A-2 crystal structure of putative transcriptional regulator sco4942 from streptomyces coelicolor 0.818 14 204
ID Description Score Start End Superfamily
2of7A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9502 7 54 1.10.10.60
2y30B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9481 14 66 1.10.10.60
2y31B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9477 15 67 1.10.10.60
2y31A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9437 15 67 1.10.10.60
2eh3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.941 14 60 1.10.10.60
ID Description Score Start End GO Terms
AF-Q1IJC6-F1-model_v4 Transcriptional regulator, TetR family 0.939 1 206 GO:0000976
GO:0003700
AF-Q1IJC6-F1-model_v4 Transcriptional regulator, TetR family 0.9258 1 206 GO:0000976
GO:0003700
AF-A0A849YYC6-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9176 1 203 GO:0000976
GO:0003700
AF-A0A1W9JA40-F1-model_v4 TetR family transcriptional regulator 0.9168 8 206 GO:0000976
GO:0003700
AF-A0A832HD70-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9166 2 209 GO:0000976
GO:0003700

Map