F353451

General Info

Members Datasets Scaffolds Average Seq Length
241 171 482 356

Family's Representative Sequence

Representative Sequence 3300005328|Ga0070676_10103606|Ga0070676_101036062
Length 387
Sequence VSDGTPARKRRAAPAKSPGSGRATRRSKPSPQAARPAVVVVTGVGRYLGARVAARLAGDPAVGRVIGVDSAPPSPELARDLGGVELRESQLRTGELLKLFGTADVTAVAHLAVATSPDPQRGGRAAMKESNVIGTMQLLAACQQAPRLRKLVVRSSTAAYGASFRDPAVFTEDTEPRDVPRGGFARDVLDIEGYVRGFCRRRPDVAATVLRFAPFIGQQAETRLSRYFSMSVVPTVLGRDPRLQFVHVDDALEVLHRAIVEDHPGTFNVAGRGVLTLNQAIRRAGRVAAPTLEPGLSGVAAFAKRSGMVDFSLDQLDLFVHGRVVDTDALVREFGFEPRTSAEAFDEFVRAQNPGPLRPQRLREAEKLILEQIRRARAALESSSSDD

Samples

Sample ID Description Type Environment
1 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
72 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
73 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
74 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
77 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
78 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
86 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
87 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
88 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
89 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
90 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
91 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
100 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
101 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
102 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
103 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
104 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
116 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
117 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
118 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
119 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
120 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
121 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
122 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
123 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
124 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
125 2501939600 Micromonospora sp. L5 Isolate Unclassified
126 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
127 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
128 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
129 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
130 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
131 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
132 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
133 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
134 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
135 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
136 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
137 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
138 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
139 2855683550 Micromonospora sp. RP3T Isolate Unclassified
140 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
141 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
142 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
143 2858868258 Micromonospora sp. MH33 Isolate Unclassified
144 2858882152 Micromonospora noduli MED15 Isolate Nodule
145 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
146 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
147 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
148 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
149 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
150 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
151 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
152 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
153 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
154 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
155 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
156 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
157 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
158 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
159 2902582711 Micromonospora sp. AP08 Isolate Unclassified
160 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
161 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
162 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
163 649633069 Micromonospora sp. L5 Isolate Unclassified
164 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
165 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
166 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
167 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
168 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
169 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
170 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
171 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 79.67
Metatranscriptomes 0.83
Isolates 19.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.07
Nodule 2.49
Rhizoplane 5.39
Rhizosphere 72.2
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10103606 3300005328 Bacteria 1762
2 Ga0070658_10004374 3300005327 Bacteria 11530
3 Ga0070683_100004446 3300005329 Bacteria 11559
4 Ga0070683_100177273 3300005329 Bacteria 2023
5 Ga0070683_100370809 3300005329 Bacteria 1364
6 Ga0068869_100144559 3300005334 Bacteria 1839
7 Ga0070680_100038932 3300005336 Bacteria 3846
8 Ga0068868_100038708 3300005338 Bacteria 3702
9 Ga0070661_100031979 3300005344 Bacteria 3807
10 Ga0070692_10078880 3300005345 Bacteria 1769
11 Ga0070668_100034998 3300005347 Bacteria 3828
12 Ga0070668_100041995 3300005347 Bacteria 3504
13 Ga0070659_100008742 3300005366 Bacteria 7412
14 Ga0070701_10067850 3300005438 Bacteria 1899
15 Ga0070700_100007192 3300005441 Bacteria 5995
16 Ga0070700_100252654 3300005441 Bacteria 1265
17 Ga0070663_100020835 3300005455 Bacteria 4347
18 Ga0070679_100021627 3300005530 Bacteria 6281
19 Ga0070679_100081724 3300005530 Bacteria 3220
20 Ga0070684_100003025 3300005535 Bacteria 12533
21 Ga0070684_100042400 3300005535 Bacteria 3928
22 Ga0070672_100163396 3300005543 Bacteria 1849
23 Ga0070664_100000129 3300005564 Bacteria 50535
24 Ga0070664_100078459 3300005564 Bacteria 2840
25 Ga0070664_100082109 3300005564 Bacteria 2779
26 Ga0070664_100254058 3300005564 Bacteria 1580
27 Ga0068857_100109532 3300005577 Bacteria 2481
28 Ga0068864_100018559 3300005618 Bacteria 5813
29 Ga0068858_100013095 3300005842 Bacteria 7821
30 Ga0068860_100011181 3300005843 Bacteria 8847
31 Ga0068860_100056505 3300005843 Bacteria 3731
32 Ga0081540_1001890 3300005983 Bacteria 17529
33 Ga0081539_10000094 3300005985 Bacteria 206102
34 Ga0081539_10000362 3300005985 Bacteria 99991
35 Ga0081539_10003266 3300005985 Bacteria 20350
36 Ga0081539_10009592 3300005985 Bacteria 8046
37 Ga0081539_10044013 3300005985 Bacteria 2581
38 Ga0075428_100000285 3300006844 Bacteria 49638
39 Ga0075428_100013396 3300006844 Bacteria 9122
40 Ga0075428_100016467 3300006844 Bacteria 8164
41 Ga0075430_100007602 3300006846 Bacteria 9156
42 Ga0075430_100009016 3300006846 Bacteria 8431
43 Ga0075430_100014818 3300006846 Bacteria 6639
44 Ga0075431_100024463 3300006847 Bacteria 6189
45 Ga0075431_100318752 3300006847 Bacteria 1568
46 Ga0075429_100000714 3300006880 Bacteria 26009
47 Ga0075429_100007533 3300006880 Bacteria 9450
48 Ga0075429_100347405 3300006880 Bacteria 1299
49 Ga0097620_100317837 3300006931 Bacteria 1651
50 Ga0111539_10002620 3300009094 Bacteria 23860
51 Ga0114129_10000278 3300009147 Bacteria 58533
52 Ga0114129_10001954 3300009147 Bacteria 28197
53 Ga0114129_10009954 3300009147 Bacteria 13553
54 Ga0114129_10043478 3300009147 Bacteria 6320
55 Ga0114129_10153598 3300009147 Bacteria 3149
56 Ga0105248_10097286 3300009177 Bacteria 3316
57 Ga0105239_10070406 3300010375 Bacteria 3842
58 Ga0157370_10256628 3300013104 Bacteria 1616
59 Ga0157369_10036206 3300013105 Bacteria 5408
60 Ga0157378_10181566 3300013297 Bacteria 1980
61 Ga0157372_10074729 3300013307 Bacteria 3822
62 Ga0157375_10193135 3300013308 Bacteria 2191
63 Ga0163163_10265488 3300014325 Bacteria 1767
64 Ga0157377_10020011 3300014745 Bacteria 3501
65 Ga0157379_10037614 3300014968 Bacteria 4316
66 Ga0157379_10177625 3300014968 Bacteria 1923
67 Ga0157379_10347616 3300014968 Bacteria 1357
68 Ga0206354_10076444 3300020081 Bacteria 1419
69 Ga0206354_10928812 3300020081 Bacteria 2123
70 Ga0207645_10054522 3300025907 Bacteria 2553
71 Ga0207693_10158773 3300025915 Bacteria 1779
72 Ga0207660_10088805 3300025917 Bacteria 2287
73 Ga0207649_10014598 3300025920 Bacteria 4401
74 Ga0207649_10025996 3300025920 Bacteria 3420
75 Ga0207652_10097521 3300025921 Bacteria 2591
76 Ga0207681_10068907 3300025923 Bacteria 2459
77 Ga0207650_10047844 3300025925 Bacteria 3153
78 Ga0207659_10005031 3300025926 Bacteria 8013
79 Ga0207700_10286832 3300025928 Bacteria 1418
80 Ga0207690_10015314 3300025932 Bacteria 4645
81 Ga0207690_10108771 3300025932 Bacteria 1993
82 Ga0207706_10097553 3300025933 Bacteria 2585
83 Ga0207665_10094284 3300025939 Bacteria 2079
84 Ga0207691_10202350 3300025940 Bacteria 1728
85 Ga0207689_10014639 3300025942 Bacteria 6664
86 Ga0207689_10297281 3300025942 Bacteria 1338
87 Ga0207661_10001025 3300025944 Bacteria 18534
88 Ga0207679_10146495 3300025945 Bacteria 1916
89 Ga0207679_10286136 3300025945 Bacteria 1415
90 Ga0207712_10164205 3300025961 Bacteria 1729
91 Ga0207668_10024028 3300025972 Bacteria 3928
92 Ga0207668_10279035 3300025972 Bacteria 1369
93 Ga0207658_10019260 3300025986 Bacteria 4719
94 Ga0207678_10022419 3300026067 Bacteria 5530
95 Ga0207708_10029877 3300026075 Bacteria 4132
96 Ga0207708_10331791 3300026075 Bacteria 1244
97 Ga0207702_10130773 3300026078 Bacteria 2259
98 Ga0207702_10175718 3300026078 Bacteria 1968
99 Ga0207674_10169361 3300026116 Bacteria 2138
100 Ga0207698_10083390 3300026142 Bacteria 2587
101 Ga0207428_10017644 3300027907 Bacteria 6120
102 Ga0268266_10104695 3300028379 Bacteria 2499
103 Ga0268265_10108123 3300028380 Bacteria 2263
104 Ga0268264_10034532 3300028381 Bacteria 4160
105 Ga0307515_10032010 3300028794 Bacteria 8734
106 Ga0307515_10077677 3300028794 Bacteria 4381
107 Ga0307515_10115218 3300028794 Bacteria 3098
108 Ga0307512_10003144 3300030522 Bacteria 19632
109 Ga0307512_10063197 3300030522 Bacteria 2832
110 Ga0307513_10007579 3300031456 Bacteria 14029
111 Ga0307513_10214652 3300031456 Bacteria 1752
112 Ga0307509_10016180 3300031507 Bacteria 8647
113 Ga0307508_10002658 3300031616 Bacteria 18756
114 Ga0307508_10003985 3300031616 Bacteria 14641
115 Ga0307508_10117644 3300031616 Bacteria 2259
116 Ga0307516_10000149 3300031730 Bacteria 86821
117 Ga0307516_10028832 3300031730 Bacteria 5614
118 Ga0307405_10035395 3300031731 Bacteria 2982
119 Ga0307405_10095631 3300031731 Bacteria 1979
120 Ga0307405_10229778 3300031731 Bacteria 1367
121 Ga0307410_10012373 3300031852 Bacteria 4932
122 Ga0326468_10000032 3300031889 Bacteria 10517
123 Ga0307406_10001142 3300031901 Bacteria 14859
124 Ga0307406_10020294 3300031901 Bacteria 3912
125 Ga0307412_10125781 3300031911 Bacteria 1854
126 Ga0307409_100000919 3300031995 Bacteria 13668
127 Ga0307409_100135969 3300031995 Bacteria 2109
128 Ga0307416_100001354 3300032002 Bacteria 13218
129 Ga0307411_10206768 3300032005 Bacteria 1512
130 Ga0307415_100000019 3300032126 Bacteria 70406
131 Ga0307415_100024195 3300032126 Bacteria 3787
132 Ga0307415_100072609 3300032126 Bacteria 2424
133 Ga0373938_0005056 3300034957 Bacteria 2229
134 Ga0373951_0001339 3300035091 Bacteria 6477
135 Ga0373943_0035834 3300035170 Bacteria 2374
136 Ga0373942_0000185 3300035207 Bacteria 15769
137 Ga0373962_0000944 3300035242 Bacteria 6693
138 Ga0373935_0078991 3300035692 Bacteria 2135
139 Ga0395899_0026300 3300037312 Bacteria 4391
140 Ga0395900_0001388 3300037418 Bacteria 29031
141 Ga0395900_0145969 3300037418 Bacteria 2419
142 Ga0395898_0007118 3300037466 Bacteria 11879
143 Ga0395898_0108948 3300037466 Bacteria 2656
144 Ga0395905_0001885 3300037471 Bacteria 24168
145 Ga0395905_0299560 3300037471 Bacteria 1495
146 Ga0395901_0001402 3300038443 Bacteria 25176
147 Ga0395901_0002968 3300038443 Bacteria 17114
148 Ga0451853_2134980 3300041512 Bacteria 6390
149 Ga0466967_0015469 3300045976 Bacteria 5982
150 Ga0495629_0115105 3300046459 Bacteria 1874
151 Ga0495629_0146478 3300046459 Bacteria 1642
152 Ga0495594_0020598 3300046499 Bacteria 3513
153 Ga0495594_0034966 3300046499 Bacteria 2736
154 Ga0495606_0001354 3300046507 Bacteria 33260
155 Ga0495668_0000872 3300046616 Bacteria 33998
156 Ga0495625_0003632 3300046660 Bacteria 15131
157 Ga0495593_0109530 3300047673 Bacteria 1411
158 Ga0495626_0000116 3300048091 Bacteria 104938
159 Ga0496104_0014437 3300048907 Bacteria 7136
160 Ga0496104_0307215 3300048907 Bacteria 1499
161 Ga0496105_0008769 3300048908 Bacteria 7870
162 Ga0496108_0000019 3300048911 Bacteria 234657
163 Ga0496108_0017399 3300048911 Bacteria 5882
164 Ga0496109_0053038 3300048912 Bacteria 3697
165 Ga0496110_0054250 3300048913 Bacteria 3525
166 Ga0496111_0036381 3300048914 Bacteria 3519
167 Ga0496112_0029066 3300048915 Bacteria 5343
168 Ga0496112_0045968 3300048915 Bacteria 4280
169 Ga0496112_0308873 3300048915 Bacteria 1526
170 Ga0496112_0427256 3300048915 Bacteria 1263
171 Ga0496113_0001222 3300048916 Bacteria 14102
172 Ga0496126_0162901 3300048929 Bacteria 1905
173 Ga0501047_0026494 3300049581 Bacteria 5577
174 nmdc:mga05p37_12543_c1 3300050507 Bacteria 10119
175 nmdc:mga05p37_276125_c1 3300050507 Bacteria 2006
176 nmdc:mga05p37_462551_c1 3300050507 Bacteria 1466
177 nmdc:mga05p37_6249_c1 3300050507 Bacteria 14026
178 nmdc:mga09592_139707_c1 3300050508 Bacteria 2087
179 nmdc:mga09592_141190_c1 3300050508 Bacteria 2076
180 nmdc:mga09592_57266_c1 3300050508 Bacteria 3294
181 nmdc:mga09592_62_c1 3300050508 Bacteria 60818
182 nmdc:mga0qj67_117_c1 3300050509 Bacteria 52622
183 nmdc:mga0qj67_205953_c1 3300050509 Bacteria 1598
184 nmdc:mga0qj67_2541_c1 3300050509 Bacteria 13039
185 nmdc:mga06r32_104347_c1 3300050510 Bacteria 2784
186 nmdc:mga06r32_160697_c1 3300050510 Bacteria 2229
187 nmdc:mga06r32_529_c1 3300050510 Bacteria 32999
188 nmdc:mga08y16_23753_c1 3300050511 Bacteria 6472
189 Ga0495619_0043288 3300053085 Bacteria 2951
190 Ga0500644_0018427 3300053088 Bacteria 2045
191 Ga0500646_0000140 3300053090 Bacteria 21197
192 Ga0500583_0002020 3300053092 Bacteria 5984
193 Ga0500583_0048318 3300053092 Bacteria 1964
194 Ga0500588_0002085 3300053146 Bacteria 3985
195 2501945478 2501939600 Bacteria 6907073
196 2515495515 2515154088 Bacteria 5526283
197 2515720274 2515154129 Bacteria 5584369
198 2515755980 2515154137 Bacteria 5711575
199 2516084397 2515154202 Bacteria 5471270
200 2516089682 2515154203 Bacteria 5458536
201 2623585198 2622736626 Bacteria 7181580
202 2676484920 2675903059 Bacteria 8644972
203 2753269918 2751185782 Bacteria 11227053
204 2772645518 2772190715 Bacteria 6959372
205 2831937074 2831935698 Bacteria 5963223
206 2832010223 2832004796 Bacteria 6538017
207 2855673887 2855670206 Bacteria 7120389
208 2855679485 2855676851 Bacteria 7063653
209 2855688748 2855683550 Bacteria 7134265
210 2856859033 2856858025 Bacteria 7255264
211 2857289439 2857288857 Bacteria 7189066
212 2858851951 2858848962 Bacteria 6963058
213 2858871972 2858868258 Bacteria 7683772
214 2858887973 2858882152 Bacteria 7230291
215 2858895380 2858888857 Bacteria 7060307
216 2858900138 2858895516 Bacteria 7378898
217 2858902794 2858902515 Bacteria 7086037
218 2866069715 2866065130 Bacteria 6518152
219 2867306141 2867302475 Bacteria 7087181
220 2867317336 2867312974 Bacteria 7058875
221 2867323153 2867319477 Bacteria 7069771
222 2867510755 2867507094 Bacteria 6506033
223 2869051499 2869048445 Bacteria 6875584
224 2869066998 2869061728 Bacteria 7112407
225 2869071708 2869068681 Bacteria 7205615
226 2880495040 2880489317 Bacteria 7096270
227 2880497289 2880495981 Bacteria 7340502
228 2887486900 2887478801 Bacteria 8972725
229 2902584179 2902582711 Bacteria 6187705
230 2929225857 2929219909 Bacteria 6984360
231 2929231154 2929226422 Bacteria 7248583
232 2996222136 2996221748 Bacteria 6799777
233 649813007 649633069 Bacteria 6962533
234 8001785289 8001781756 Bacteria 9586736
235 8003831756 8003830390 Bacteria 6541657
236 8003860594 8003856774 Bacteria 7675274
237 8003870837 8003870546 Bacteria 7396674
238 8054704388 8054704163 Bacteria 7247792
239 8054731518 8054727385 Bacteria 7558670
240 8054736132 8054734606 Bacteria 6947278
241 8055415413 8055412473 Bacteria 6257500
242 Ga0070676_10103606
243 Ga0070658_10004374
244 Ga0070683_100004446
245 Ga0070683_100177273
246 Ga0070683_100370809
247 Ga0068869_100144559
248 Ga0070680_100038932
249 Ga0068868_100038708
250 Ga0070661_100031979
251 Ga0070692_10078880
252 Ga0070668_100034998
253 Ga0070668_100041995
254 Ga0070659_100008742
255 Ga0070701_10067850
256 Ga0070700_100007192
257 Ga0070700_100252654
258 Ga0070663_100020835
259 Ga0070679_100021627
260 Ga0070679_100081724
261 Ga0070684_100003025
262 Ga0070684_100042400
263 Ga0070672_100163396
264 Ga0070664_100000129
265 Ga0070664_100078459
266 Ga0070664_100082109
267 Ga0070664_100254058
268 Ga0068857_100109532
269 Ga0068864_100018559
270 Ga0068858_100013095
271 Ga0068860_100011181
272 Ga0068860_100056505
273 Ga0081540_1001890
274 Ga0081539_10000094
275 Ga0081539_10000362
276 Ga0081539_10003266
277 Ga0081539_10009592
278 Ga0081539_10044013
279 Ga0075428_100000285
280 Ga0075428_100013396
281 Ga0075428_100016467
282 Ga0075430_100007602
283 Ga0075430_100009016
284 Ga0075430_100014818
285 Ga0075431_100024463
286 Ga0075431_100318752
287 Ga0075429_100000714
288 Ga0075429_100007533
289 Ga0075429_100347405
290 Ga0097620_100317837
291 Ga0111539_10002620
292 Ga0114129_10000278
293 Ga0114129_10001954
294 Ga0114129_10009954
295 Ga0114129_10043478
296 Ga0114129_10153598
297 Ga0105248_10097286
298 Ga0105239_10070406
299 Ga0157370_10256628
300 Ga0157369_10036206
301 Ga0157378_10181566
302 Ga0157372_10074729
303 Ga0157375_10193135
304 Ga0163163_10265488
305 Ga0157377_10020011
306 Ga0157379_10037614
307 Ga0157379_10177625
308 Ga0157379_10347616
309 Ga0206354_10076444
310 Ga0206354_10928812
311 Ga0207645_10054522
312 Ga0207693_10158773
313 Ga0207660_10088805
314 Ga0207649_10014598
315 Ga0207649_10025996
316 Ga0207652_10097521
317 Ga0207681_10068907
318 Ga0207650_10047844
319 Ga0207659_10005031
320 Ga0207700_10286832
321 Ga0207690_10015314
322 Ga0207690_10108771
323 Ga0207706_10097553
324 Ga0207665_10094284
325 Ga0207691_10202350
326 Ga0207689_10014639
327 Ga0207689_10297281
328 Ga0207661_10001025
329 Ga0207679_10146495
330 Ga0207679_10286136
331 Ga0207712_10164205
332 Ga0207668_10024028
333 Ga0207668_10279035
334 Ga0207658_10019260
335 Ga0207678_10022419
336 Ga0207708_10029877
337 Ga0207708_10331791
338 Ga0207702_10130773
339 Ga0207702_10175718
340 Ga0207674_10169361
341 Ga0207698_10083390
342 Ga0207428_10017644
343 Ga0268266_10104695
344 Ga0268265_10108123
345 Ga0268264_10034532
346 Ga0307515_10032010
347 Ga0307515_10077677
348 Ga0307515_10115218
349 Ga0307512_10003144
350 Ga0307512_10063197
351 Ga0307513_10007579
352 Ga0307513_10214652
353 Ga0307509_10016180
354 Ga0307508_10002658
355 Ga0307508_10003985
356 Ga0307508_10117644
357 Ga0307516_10000149
358 Ga0307516_10028832
359 Ga0307405_10035395
360 Ga0307405_10095631
361 Ga0307405_10229778
362 Ga0307410_10012373
363 Ga0326468_10000032
364 Ga0307406_10001142
365 Ga0307406_10020294
366 Ga0307412_10125781
367 Ga0307409_100000919
368 Ga0307409_100135969
369 Ga0307416_100001354
370 Ga0307411_10206768
371 Ga0307415_100000019
372 Ga0307415_100024195
373 Ga0307415_100072609
374 Ga0373938_0005056
375 Ga0373951_0001339
376 Ga0373943_0035834
377 Ga0373942_0000185
378 Ga0373962_0000944
379 Ga0373935_0078991
380 Ga0395899_0026300
381 Ga0395900_0001388
382 Ga0395900_0145969
383 Ga0395898_0007118
384 Ga0395898_0108948
385 Ga0395905_0001885
386 Ga0395905_0299560
387 Ga0395901_0001402
388 Ga0395901_0002968
389 Ga0451853_2134980
390 Ga0466967_0015469
391 Ga0495629_0115105
392 Ga0495629_0146478
393 Ga0495594_0020598
394 Ga0495594_0034966
395 Ga0495606_0001354
396 Ga0495668_0000872
397 Ga0495625_0003632
398 Ga0495593_0109530
399 Ga0495626_0000116
400 Ga0496104_0014437
401 Ga0496104_0307215
402 Ga0496105_0008769
403 Ga0496108_0000019
404 Ga0496108_0017399
405 Ga0496109_0053038
406 Ga0496110_0054250
407 Ga0496111_0036381
408 Ga0496112_0029066
409 Ga0496112_0045968
410 Ga0496112_0308873
411 Ga0496112_0427256
412 Ga0496113_0001222
413 Ga0496126_0162901
414 Ga0501047_0026494
415 nmdc:mga05p37_12543_c1
416 nmdc:mga05p37_276125_c1
417 nmdc:mga05p37_462551_c1
418 nmdc:mga05p37_6249_c1
419 nmdc:mga09592_139707_c1
420 nmdc:mga09592_141190_c1
421 nmdc:mga09592_57266_c1
422 nmdc:mga09592_62_c1
423 nmdc:mga0qj67_117_c1
424 nmdc:mga0qj67_205953_c1
425 nmdc:mga0qj67_2541_c1
426 nmdc:mga06r32_104347_c1
427 nmdc:mga06r32_160697_c1
428 nmdc:mga06r32_529_c1
429 nmdc:mga08y16_23753_c1
430 Ga0495619_0043288
431 Ga0500644_0018427
432 Ga0500646_0000140
433 Ga0500583_0002020
434 Ga0500583_0048318
435 Ga0500588_0002085
436 2501945478
437 2515495515
438 2515720274
439 2515755980
440 2516084397
441 2516089682
442 2623585198
443 2676484920
444 2753269918
445 2772645518
446 2831937074
447 2832010223
448 2855673887
449 2855679485
450 2855688748
451 2856859033
452 2857289439
453 2858851951
454 2858871972
455 2858887973
456 2858895380
457 2858900138
458 2858902794
459 2866069715
460 2867306141
461 2867317336
462 2867323153
463 2867510755
464 2869051499
465 2869066998
466 2869071708
467 2880495040
468 2880497289
469 2887486900
470 2902584179
471 2929225857
472 2929231154
473 2996222136
474 649813007
475 8001785289
476 8003831756
477 8003860594
478 8003870837
479 8054704388
480 8054731518
481 8054736132
482 8055415413

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

39

270

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4yrb-assembly3.cif.gz_F mouse tdh mutant r180k with nad+ bound 0.8214 20 247
4yrb-assembly2.cif.gz_D mouse tdh mutant r180k with nad+ bound 0.8158 20 262
4yrb-assembly1.cif.gz_A mouse tdh mutant r180k with nad+ bound 0.7996 20 249
6jkh-assembly1.cif.gz_B the nad+-bound form of human nsdhl 0.7912 21 189
4yrb-assembly3.cif.gz_E mouse tdh mutant r180k with nad+ bound 0.7652 20 251
ID Description Score Start End Superfamily
af_P9WKT3_23_337_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9032 20 325 3.40.50.720
af_P9WKT3_23_337_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.876 20 325 3.40.50.720
af_P9WIH5_2_250_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8333 22 325 3.40.50.720
2c59B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8266 22 246 3.40.50.720
af_P9WIH5_2_250_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8242 22 325 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7J9YZV5-F1-model_v4 Uncharacterized protein 0.9478 183 270
AF-A0A2S8LV00-F1-model_v4 deleted 0.9476 191 273
AF-A0A3N0E987-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9244 20 331
AF-A0A3N1GNH4-F1-model_v4 UDP-glucose 4-epimerase 0.9231 17 357
AF-A0A1M5QWU4-F1-model_v4 UDP-glucose 4-epimerase 0.9204 21 325

Map