F353416

General Info

Members Datasets Scaffolds Average Seq Length
241 180 482 550

Family's Representative Sequence

Representative Sequence 3300003771|Ga0055526_1001091|Ga0055526_10010919
Length 575
Sequence MNWPLPSPNAASRTAESSATDAWMQIMQNILTLHNPQNARDYYLSGIWQQDTLYTLARRHARERPTSCALRDADLRLTWREVIDWVDSVAEALHRQGLKPGDRVGIWLPNVVQATIVFLACSRNGYVCCPSLHQNYTVDEICTLLNRIQCRALFGMPGYGADSERNSIFARAGDIPTMAAMYAMPGMGTTNTATPANAQPFPDRQPPSALSTPDLNPDKIVYLAFTSGTTGLPKGVMHSDNTLLANGRALVDDWGHGAGTVVLTLSPMSHHIATVALEQVLVSGAELVMTNLGAGKHAVDWILETGATYVMGVPTHAMDILQAVRDRNLNSLGEVRTFYMAGAAIPREVAQKFVNLGITPQNVYGMTENGSHNYTIPTDTADTIVSTCGRACRGYEVRLWKQDNWDVEAEVLLMLGYFSNQVATETSFNIHGWFMSGDLGIVDENGCIVIVGRKKDLIIRGGHNIHPARIEELALRHPLVERAAAYPVHDERLGEKVCLAVVVRPDHPLAPDDMLEHLASCGLSKYDMPEFFISLEKFPLTASGKILKRDLVELTLRGELKPTGVRYKSRTTVGA

Samples

Sample ID Description Type Environment
1 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
56 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
58 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
79 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
80 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
84 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
85 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
86 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
87 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
90 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
91 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
92 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
102 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
103 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
104 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
105 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
111 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
112 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
115 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
116 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
121 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
122 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048986 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1E Metagenome Unclassified
136 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
137 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
160 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
166 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
167 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
168 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
171 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
172 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
173 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
174 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
175 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
176 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
177 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
178 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
179 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
180 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.02
Metatranscriptomes 0
Isolates 4.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.13
Nodule 0.83
Rhizoplane 8.3
Rhizosphere 73.03
Stem 0
Stem Tuber 0
Unclassified 0.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055526_1001091 3300003771 Bacteria 19781
2 JGI25406J46586_10000117 3300003203 Bacteria 34556
3 Ga0055534_1000434 3300003784 Bacteria 24859
4 Ga0070658_10087812 3300005327 Unclassified 2560
5 Ga0070658_10104437 3300005327 Bacteria 2344
6 Ga0070683_100010694 3300005329 Bacteria 7890
7 Ga0070670_100005071 3300005331 Bacteria 11079
8 Ga0070670_100007175 3300005331 Bacteria 9437
9 Ga0068868_100007061 3300005338 Bacteria 7982
10 Ga0070687_100025832 3300005343 Bacteria 2822
11 Ga0070661_100053031 3300005344 Bacteria 2967
12 Ga0070675_100034182 3300005354 Bacteria 4124
13 Ga0070671_100037196 3300005355 Bacteria 4036
14 Ga0070671_100042798 3300005355 Bacteria 3765
15 Ga0070673_100039198 3300005364 Bacteria 3624
16 Ga0070667_100057337 3300005367 Bacteria 3292
17 Ga0070714_100125110 3300005435 Bacteria 2291
18 Ga0070700_100043979 3300005441 Bacteria 2748
19 Ga0070678_100006543 3300005456 Bacteria 6843
20 Ga0070681_10003510 3300005458 Bacteria 14689
21 Ga0070681_10024436 3300005458 Bacteria 6083
22 Ga0070706_100030160 3300005467 Bacteria 4995
23 Ga0070707_100010216 3300005468 Bacteria 8741
24 Ga0070698_100019925 3300005471 Bacteria 7035
25 Ga0070699_100015140 3300005518 Bacteria 6625
26 Ga0070679_100046522 3300005530 Bacteria 4324
27 Ga0070684_100015167 3300005535 Bacteria 6267
28 Ga0070697_100009035 3300005536 Bacteria 7785
29 Ga0070686_100094932 3300005544 Bacteria 2003
30 Ga0068852_100006409 3300005616 Bacteria 8503
31 Ga0068864_100021001 3300005618 Bacteria 5468
32 Ga0068860_100090749 3300005843 Bacteria 2911
33 Ga0081455_10000912 3300005937 Bacteria 37904
34 Ga0081540_1000008 3300005983 Bacteria 203702
35 Ga0081540_1003531 3300005983 Bacteria 12325
36 Ga0081539_10000922 3300005985 Bacteria 55364
37 Ga0075365_10041288 3300006038 Bacteria 3013
38 Ga0075368_10001489 3300006042 Bacteria 7499
39 Ga0075364_10000545 3300006051 Bacteria 19227
40 Ga0075364_10002318 3300006051 Bacteria 10675
41 Ga0075364_10110386 3300006051 Bacteria 1835
42 Ga0070712_100003831 3300006175 Bacteria 9259
43 Ga0075367_10020748 3300006178 Bacteria 3664
44 Ga0075367_10065728 3300006178 Unclassified 2172
45 Ga0097621_100033590 3300006237 Bacteria 4087
46 Ga0068871_100059644 3300006358 Bacteria 3110
47 Ga0075428_100000857 3300006844 Bacteria 31999
48 Ga0075428_100004702 3300006844 Bacteria 15113
49 Ga0075431_100009236 3300006847 Bacteria 9896
50 Ga0075431_100021908 3300006847 Bacteria 6533
51 Ga0075429_100008040 3300006880 Bacteria 9167
52 Ga0075436_100008299 3300006914 Bacteria 7106
53 Ga0111539_10006040 3300009094 Bacteria 15635
54 Ga0114129_10029027 3300009147 Bacteria 7836
55 Ga0105243_10039738 3300009148 Bacteria 3670
56 Ga0105248_10097160 3300009177 Bacteria 3319
57 Ga0157374_10011741 3300013296 Bacteria 7599
58 Ga0157378_10062122 3300013297 Bacteria 3335
59 Ga0163162_10008575 3300013306 Bacteria 9963
60 Ga0157375_10015007 3300013308 Bacteria 6928
61 Ga0157377_10019267 3300014745 Bacteria 3563
62 Ga0157376_10036796 3300014969 Bacteria 3968
63 Ga0163161_10063676 3300017792 Bacteria 2688
64 Ga0213875_10000556 3300021388 Bacteria 30532
65 Ga0213875_10000603 3300021388 Bacteria 29115
66 Ga0213875_10006623 3300021388 Bacteria 6054
67 Ga0209759_1001780 3300025256 Bacteria 10947
68 Ga0209675_1000090 3300025291 Bacteria 146665
69 Ga0209025_1001275 3300025294 Bacteria 34648
70 Ga0209564_1000985 3300025295 Bacteria 35696
71 Ga0207697_10002937 3300025315 Bacteria 8608
72 Ga0207682_10012074 3300025893 Bacteria 3374
73 Ga0207645_10106105 3300025907 Bacteria 1816
74 Ga0207643_10008262 3300025908 Bacteria 5588
75 Ga0207707_10023148 3300025912 Bacteria 5435
76 Ga0207693_10006326 3300025915 Bacteria 9818
77 Ga0207650_10013997 3300025925 Bacteria 5570
78 Ga0207650_10036152 3300025925 Bacteria 3591
79 Ga0207659_10003404 3300025926 Bacteria 9536
80 Ga0207664_10040711 3300025929 Bacteria 3616
81 Ga0207644_10077534 3300025931 Bacteria 2447
82 Ga0207704_10032164 3300025938 Bacteria 2965
83 Ga0207691_10019372 3300025940 Bacteria 6438
84 Ga0207691_10082389 3300025940 Bacteria 2890
85 Ga0207691_10082726 3300025940 Bacteria 2883
86 Ga0207711_10109079 3300025941 Bacteria 2459
87 Ga0207689_10013309 3300025942 Bacteria 7018
88 Ga0207658_10041903 3300025986 Bacteria 3318
89 Ga0207658_10062643 3300025986 Bacteria 2784
90 Ga0207677_10011072 3300026023 Bacteria 5127
91 Ga0207677_10055653 3300026023 Bacteria 2706
92 Ga0207641_10158365 3300026088 Bacteria 2056
93 Ga0207676_10043998 3300026095 Bacteria 3442
94 Ga0207683_10004517 3300026121 Bacteria 12005
95 Ga0207683_10013977 3300026121 Bacteria 6846
96 Ga0209389_1000004 3300027296 Bacteria 263759
97 Ga0209489_100172 3300027361 Bacteria 100396
98 Ga0209995_1002574 3300027471 Bacteria 2869
99 Ga0209970_1004511 3300027614 Bacteria 2313
100 Ga0207428_10004494 3300027907 Bacteria 13228
101 Ga0207428_10081790 3300027907 Bacteria 2521
102 Ga0265328_10001485 3300031239 Bacteria 10821
103 Ga0265329_10010305 3300031242 Bacteria 3438
104 Ga0265331_10048413 3300031250 Bacteria 2043
105 Ga0265316_10009185 3300031344 Bacteria 9107
106 Ga0316579_10000932 3300031691 Bacteria 10169
107 Ga0265314_10001567 3300031711 Bacteria 25135
108 Ga0307406_10032588 3300031901 Bacteria 3183
109 Ga0316583_10003229 3300032133 Bacteria 5737
110 Ga0316583_10004645 3300032133 Bacteria 4902
111 Ga0307510_10000001 3300033180 Bacteria 1172244
112 Ga0307510_10006484 3300033180 Bacteria 13961
113 Ga0373933_0003414 3300035724 Bacteria 8855
114 Ga0373947_0039094 3300035725 Bacteria 2822
115 Ga0373947_0087521 3300035725 Bacteria 1937
116 Ga0373937_0005973 3300036401 Bacteria 10482
117 Ga0373937_0030617 3300036401 Bacteria 4873
118 Ga0373937_0112814 3300036401 Bacteria 2529
119 Ga0316582_0001123 3300036647 Bacteria 11363
120 Ga0395900_0052921 3300037418 Bacteria 4179
121 Ga0395905_0046100 3300037471 Bacteria 4088
122 Ga0436364_0508608 3300037853 Bacteria 35332
123 Ga0436364_0812264 3300037853 Bacteria 26045
124 Ga0436364_1339868 3300037853 Bacteria 38841
125 Ga0395901_0017014 3300038443 Bacteria 7411
126 Ga0436365_1451465 3300039437 Bacteria 8137
127 Ga0436360_0766683 3300039438 Bacteria 2985
128 Ga0436363_1357002 3300039450 Bacteria 3716
129 Ga0439441_000497 3300042001 Bacteria 4289
130 Ga0451577_0073685 3300042876 Bacteria 3046
131 Ga0466966_0001889 3300044684 Bacteria 13599
132 Ga0453684_0138266 3300044712 Bacteria 2913
133 Ga0466957_0038416 3300044842 Bacteria 2884
134 Ga0466959_0010594 3300045049 Bacteria 6600
135 Ga0451576_0044438 3300045051 Bacteria 4683
136 Ga0495629_0000295 3300046459 Bacteria 42788
137 Ga0495580_0020564 3300046472 Bacteria 4883
138 Ga0495580_0104812 3300046472 Bacteria 1965
139 Ga0495583_0000255 3300046506 Bacteria 88289
140 Ga0495630_0000342 3300046517 Bacteria 36980
141 Ga0495666_0001023 3300046526 Bacteria 13252
142 Ga0495666_0013070 3300046526 Bacteria 4137
143 Ga0495586_0041283 3300046535 Bacteria 2484
144 Ga0495645_0002096 3300046543 Bacteria 13544
145 Ga0495625_0041600 3300046660 Bacteria 3345
146 Ga0495599_0006749 3300046678 Bacteria 6932
147 Ga0495604_0001617 3300047317 Bacteria 18571
148 Ga0495604_0075709 3300047317 Bacteria 2533
149 Ga0495683_0013702 3300047323 Bacteria 4235
150 Ga0495687_000170 3300047443 Bacteria 96886
151 Ga0495681_0001393 3300047470 Bacteria 18234
152 Ga0496101_0094656 3300048904 Bacteria 2227
153 Ga0496104_0000769 3300048907 Bacteria 27437
154 Ga0496104_0001229 3300048907 Bacteria 22044
155 Ga0496104_0164000 3300048907 Bacteria 2131
156 Ga0496105_0002755 3300048908 Bacteria 12835
157 Ga0496105_0035036 3300048908 Bacteria 4130
158 Ga0496106_0001086 3300048909 Bacteria 20082
159 Ga0496106_0027321 3300048909 Bacteria 4250
160 Ga0496108_0046957 3300048911 Bacteria 3609
161 Ga0496109_0000835 3300048912 Bacteria 25687
162 Ga0496110_0017491 3300048913 Bacteria 5998
163 Ga0496111_0060328 3300048914 Bacteria 2749
164 Ga0496112_0062821 3300048915 Bacteria 3664
165 Ga0496112_0092016 3300048915 Bacteria 3002
166 Ga0496114_0030781 3300048917 Bacteria 4416
167 Ga0496114_0037270 3300048917 Bacteria 4021
168 Ga0496114_0038483 3300048917 Bacteria 3958
169 Ga0496114_0137658 3300048917 Bacteria 2112
170 Ga0496115_0013898 3300048918 Bacteria 6093
171 Ga0496115_0057304 3300048918 Bacteria 3134
172 Ga0496121_0001460 3300048924 Bacteria 39925
173 Ga0466983_0005887 3300048986 Bacteria 8594
174 Ga0495682_0000459 3300049460 Bacteria 28107
175 Ga0501031_0025436 3300049568 Bacteria 3860
176 Ga0501032_0000013 3300049569 Bacteria 185070
177 Ga0501033_0000427 3300049570 Bacteria 40245
178 Ga0501034_0000054 3300049571 Bacteria 206373
179 Ga0501034_0000569 3300049571 Bacteria 58487
180 Ga0501034_0086349 3300049571 Bacteria 3138
181 Ga0501036_0000031 3300049572 Bacteria 92249
182 Ga0501036_0000562 3300049572 Bacteria 26673
183 Ga0501037_0000096 3300049573 Bacteria 81773
184 Ga0501037_0004290 3300049573 Bacteria 10344
185 Ga0501038_0000018 3300049574 Bacteria 155191
186 Ga0501039_0000018 3300049575 Bacteria 176187
187 Ga0501039_0000095 3300049575 Bacteria 61547
188 Ga0501039_0088646 3300049575 Bacteria 2410
189 Ga0501040_0026315 3300049576 Bacteria 3913
190 Ga0501041_0051185 3300049577 Bacteria 2517
191 Ga0501043_0000014 3300049579 Bacteria 184687
192 Ga0501043_0000331 3300049579 Bacteria 42804
193 Ga0501046_0027880 3300049580 Bacteria 4604
194 Ga0501046_0059420 3300049580 Bacteria 2995
195 Ga0501047_0046096 3300049581 Bacteria 4214
196 Ga0501047_0051836 3300049581 Bacteria 3966
197 Ga0501070_0067892 3300049586 Bacteria 2952
198 Ga0501071_0044321 3300049587 Bacteria 3191
199 Ga0501072_0019846 3300049588 Bacteria 5201
200 Ga0501079_0012660 3300049741 Bacteria 6444
201 Ga0501035_0000019 3300049822 Bacteria 241152
202 Ga0501035_0000204 3300049822 Bacteria 72214
203 Ga0501044_0001154 3300049823 Bacteria 31290
204 Ga0501044_0003562 3300049823 Bacteria 17529
205 Ga0501044_0006006 3300049823 Bacteria 13414
206 Ga0501045_0028089 3300049824 Bacteria 4057
207 Ga0501045_0113751 3300049824 Bacteria 2007
208 nmdc:mga00v17_18030_c1 3300050491 Bacteria 4006
209 nmdc:mga00v17_435_c1 3300050491 Bacteria 23450
210 nmdc:mga0yw44_33211_c1 3300050492 Bacteria 3013
211 nmdc:mga0yw44_81825_c1 3300050492 Bacteria 2025
212 nmdc:mga06z11_11463_c1 3300050494 Bacteria 3824
213 nmdc:mga06z11_1418_c1 3300050494 Bacteria 8905
214 nmdc:mga06z11_5232_c1 3300050494 Bacteria 5187
215 nmdc:mga04h51_1077_c1 3300050495 Bacteria 6294
216 nmdc:mga09592_5715_c1 3300050508 Bacteria 10141
217 nmdc:mga0qj67_96539_c1 3300050509 Bacteria 2379
218 nmdc:mga06r32_12954_c1 3300050510 Bacteria 7540
219 nmdc:mga06r32_17554_c1 3300050510 Bacteria 6533
220 nmdc:mga08y16_808_c1 3300050511 Bacteria 29915
221 nmdc:mga08x19_5385_c1 3300050514 Bacteria 7563
222 Ga0495619_0008318 3300053085 Bacteria 6559
223 Ga0495619_0036784 3300053085 Bacteria 3189
224 Ga0500608_002083 3300053122 Bacteria 7176
225 Ga0500559_0000072 3300053136 Bacteria 79568
226 Ga0501084_0018775 3300054114 Bacteria 5757
227 Ga0501084_0084757 3300054114 Bacteria 2660
228 Ga0501084_0189029 3300054114 Bacteria 1738
229 Ga0501082_0008032 3300060353 Bacteria 9109
230 2644029539 2643221603 Bacteria 6147767
231 2644030880 2643221603 Bacteria 6147767
232 2739613664 2739367655 Bacteria 4051151
233 2758639541 2758568016 Bacteria 5645291
234 2792834513 2791355137 Bacteria 9654227
235 2887377480 2887375801 Bacteria 5334027
236 2889916912 2889914905 Bacteria 5702301
237 2897808534 2897803580 Bacteria 7000062
238 2900641488 2900634093 Bacteria 10263517
239 2900641495 2900634093 Bacteria 10263517
240 2939636780 2939631187 Bacteria 6118131
241 8039102187 8039098773 Bacteria 6602928
242 Ga0055526_1001091
243 JGI25406J46586_10000117
244 Ga0055534_1000434
245 Ga0070658_10087812
246 Ga0070658_10104437
247 Ga0070683_100010694
248 Ga0070670_100005071
249 Ga0070670_100007175
250 Ga0068868_100007061
251 Ga0070687_100025832
252 Ga0070661_100053031
253 Ga0070675_100034182
254 Ga0070671_100037196
255 Ga0070671_100042798
256 Ga0070673_100039198
257 Ga0070667_100057337
258 Ga0070714_100125110
259 Ga0070700_100043979
260 Ga0070678_100006543
261 Ga0070681_10003510
262 Ga0070681_10024436
263 Ga0070706_100030160
264 Ga0070707_100010216
265 Ga0070698_100019925
266 Ga0070699_100015140
267 Ga0070679_100046522
268 Ga0070684_100015167
269 Ga0070697_100009035
270 Ga0070686_100094932
271 Ga0068852_100006409
272 Ga0068864_100021001
273 Ga0068860_100090749
274 Ga0081455_10000912
275 Ga0081540_1000008
276 Ga0081540_1003531
277 Ga0081539_10000922
278 Ga0075365_10041288
279 Ga0075368_10001489
280 Ga0075364_10000545
281 Ga0075364_10002318
282 Ga0075364_10110386
283 Ga0070712_100003831
284 Ga0075367_10020748
285 Ga0075367_10065728
286 Ga0097621_100033590
287 Ga0068871_100059644
288 Ga0075428_100000857
289 Ga0075428_100004702
290 Ga0075431_100009236
291 Ga0075431_100021908
292 Ga0075429_100008040
293 Ga0075436_100008299
294 Ga0111539_10006040
295 Ga0114129_10029027
296 Ga0105243_10039738
297 Ga0105248_10097160
298 Ga0157374_10011741
299 Ga0157378_10062122
300 Ga0163162_10008575
301 Ga0157375_10015007
302 Ga0157377_10019267
303 Ga0157376_10036796
304 Ga0163161_10063676
305 Ga0213875_10000556
306 Ga0213875_10000603
307 Ga0213875_10006623
308 Ga0209759_1001780
309 Ga0209675_1000090
310 Ga0209025_1001275
311 Ga0209564_1000985
312 Ga0207697_10002937
313 Ga0207682_10012074
314 Ga0207645_10106105
315 Ga0207643_10008262
316 Ga0207707_10023148
317 Ga0207693_10006326
318 Ga0207650_10013997
319 Ga0207650_10036152
320 Ga0207659_10003404
321 Ga0207664_10040711
322 Ga0207644_10077534
323 Ga0207704_10032164
324 Ga0207691_10019372
325 Ga0207691_10082389
326 Ga0207691_10082726
327 Ga0207711_10109079
328 Ga0207689_10013309
329 Ga0207658_10041903
330 Ga0207658_10062643
331 Ga0207677_10011072
332 Ga0207677_10055653
333 Ga0207641_10158365
334 Ga0207676_10043998
335 Ga0207683_10004517
336 Ga0207683_10013977
337 Ga0209389_1000004
338 Ga0209489_100172
339 Ga0209995_1002574
340 Ga0209970_1004511
341 Ga0207428_10004494
342 Ga0207428_10081790
343 Ga0265328_10001485
344 Ga0265329_10010305
345 Ga0265331_10048413
346 Ga0265316_10009185
347 Ga0316579_10000932
348 Ga0265314_10001567
349 Ga0307406_10032588
350 Ga0316583_10003229
351 Ga0316583_10004645
352 Ga0307510_10000001
353 Ga0307510_10006484
354 Ga0373933_0003414
355 Ga0373947_0039094
356 Ga0373947_0087521
357 Ga0373937_0005973
358 Ga0373937_0030617
359 Ga0373937_0112814
360 Ga0316582_0001123
361 Ga0395900_0052921
362 Ga0395905_0046100
363 Ga0436364_0508608
364 Ga0436364_0812264
365 Ga0436364_1339868
366 Ga0395901_0017014
367 Ga0436365_1451465
368 Ga0436360_0766683
369 Ga0436363_1357002
370 Ga0439441_000497
371 Ga0451577_0073685
372 Ga0466966_0001889
373 Ga0453684_0138266
374 Ga0466957_0038416
375 Ga0466959_0010594
376 Ga0451576_0044438
377 Ga0495629_0000295
378 Ga0495580_0020564
379 Ga0495580_0104812
380 Ga0495583_0000255
381 Ga0495630_0000342
382 Ga0495666_0001023
383 Ga0495666_0013070
384 Ga0495586_0041283
385 Ga0495645_0002096
386 Ga0495625_0041600
387 Ga0495599_0006749
388 Ga0495604_0001617
389 Ga0495604_0075709
390 Ga0495683_0013702
391 Ga0495687_000170
392 Ga0495681_0001393
393 Ga0496101_0094656
394 Ga0496104_0000769
395 Ga0496104_0001229
396 Ga0496104_0164000
397 Ga0496105_0002755
398 Ga0496105_0035036
399 Ga0496106_0001086
400 Ga0496106_0027321
401 Ga0496108_0046957
402 Ga0496109_0000835
403 Ga0496110_0017491
404 Ga0496111_0060328
405 Ga0496112_0062821
406 Ga0496112_0092016
407 Ga0496114_0030781
408 Ga0496114_0037270
409 Ga0496114_0038483
410 Ga0496114_0137658
411 Ga0496115_0013898
412 Ga0496115_0057304
413 Ga0496121_0001460
414 Ga0466983_0005887
415 Ga0495682_0000459
416 Ga0501031_0025436
417 Ga0501032_0000013
418 Ga0501033_0000427
419 Ga0501034_0000054
420 Ga0501034_0000569
421 Ga0501034_0086349
422 Ga0501036_0000031
423 Ga0501036_0000562
424 Ga0501037_0000096
425 Ga0501037_0004290
426 Ga0501038_0000018
427 Ga0501039_0000018
428 Ga0501039_0000095
429 Ga0501039_0088646
430 Ga0501040_0026315
431 Ga0501041_0051185
432 Ga0501043_0000014
433 Ga0501043_0000331
434 Ga0501046_0027880
435 Ga0501046_0059420
436 Ga0501047_0046096
437 Ga0501047_0051836
438 Ga0501070_0067892
439 Ga0501071_0044321
440 Ga0501072_0019846
441 Ga0501079_0012660
442 Ga0501035_0000019
443 Ga0501035_0000204
444 Ga0501044_0001154
445 Ga0501044_0003562
446 Ga0501044_0006006
447 Ga0501045_0028089
448 Ga0501045_0113751
449 nmdc:mga00v17_18030_c1
450 nmdc:mga00v17_435_c1
451 nmdc:mga0yw44_33211_c1
452 nmdc:mga0yw44_81825_c1
453 nmdc:mga06z11_11463_c1
454 nmdc:mga06z11_1418_c1
455 nmdc:mga06z11_5232_c1
456 nmdc:mga04h51_1077_c1
457 nmdc:mga09592_5715_c1
458 nmdc:mga0qj67_96539_c1
459 nmdc:mga06r32_12954_c1
460 nmdc:mga06r32_17554_c1
461 nmdc:mga08y16_808_c1
462 nmdc:mga08x19_5385_c1
463 Ga0495619_0008318
464 Ga0495619_0036784
465 Ga0500608_002083
466 Ga0500559_0000072
467 Ga0501084_0018775
468 Ga0501084_0084757
469 Ga0501084_0189029
470 Ga0501082_0008032
471 2644029539
472 2644030880
473 2739613664
474 2758639541
475 2792834513
476 2887377480
477 2889916912
478 2897808534
479 2900641488
480 2900641495
481 2939636780
482 8039102187

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

469

545

0.93

PF00501

AMP-binding

AMP-binding enzyme

57

411

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
5bur-assembly1.cif.gz_A o-succinylbenzoate coenzyme a synthetase (mene) from bacillus subtilis, in complex with atp and magnesium ion 0.9061 31 516
5gtd-assembly1.cif.gz_A o-succinylbenzoate coa synthetase (mene) from bacillus subtilis in complex with the acyl-adenylate intermediate osb-amp 0.9058 26 516
5buq-assembly1.cif.gz_A unliganded form of o-succinylbenzoate coenzyme a synthetase (mene) from bacillus subtilis, solved at 1.98 angstroms 0.905 26 502
3u16-assembly2.cif.gz_B structure of base n-terminal domain from acinetobacter baumannii bound to 6-(p-benzyloxy)phenyl-1-(pyridin-4-ylmethyl)-1h-pyrazolo[3,4-b]pyridine-4-carboxylic acid. 0.904 6 422
3o83-assembly1.cif.gz_A structure of base n-terminal domain from acinetobacter baumannii bound to 2-(4-n-dodecyl-1,2,3-triazol-1-yl)-5'-o-[n-(2-hydroxybenzoyl)sulfamoyl]adenosine 0.9017 6 422
ID Description Score Start End Superfamily
3iplB02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9316 424 502 3.30.300.30
af_A0A1D6Q7M3_383_529_2.30.38.10 Mainly Beta;Roll;Luciferase; domain 3;Luciferase; Domain 3 0.9293 344 422 2.30.38.10
af_I6Y0X0_20_434_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9198 23 419 3.40.50.12780
af_P38135_21_451_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9152 6 422 3.40.50.12780
3cw8X04 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.909 425 519 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A2V7W3W0-F1-model_v4 Long-chain fatty acid--CoA ligase 0.9176 27 520 GO:0006631
GO:0008757
GO:0031956
GO:0032259
AF-A0A381ZU98-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9155 24 475 GO:0006631
GO:0031956
AF-A0A0B0HJE7-F1-model_v4 deleted 0.9087 31 418
AF-A0A1D2N585-F1-model_v4 Medium-chain acyl-CoA ligase ACSF2, mitochondrial (EC 6.2.1.2) 0.9086 23 524 GO:0006631
GO:0031956
AF-A0A2A4I4P1-F1-model_v4 Fatty-acid--CoA ligase 0.9063 27 518 GO:0005524
GO:0006631
GO:0031956

Map