F353207

General Info

Members Datasets Scaffolds Average Seq Length
240 179 210 309

Family's Representative Sequence

Representative Sequence 3300047443|Ga0495687_008023|Ga0495687_008023_3625_4692
Length 355
Sequence VDIPVDQAQPEITSTLQRNQEQYMARTQPDITVAGLSGKLAVVTGASDGVGLGLAARLAAAGAEVVMPVRNPRKGEAAVAKIKQQHPEAALSLRDLDLSSLGSVAALGATLRGERRPVHILINNAGVMTPPHRQTTTDGFELQFGSNHLGHFALVAHLLPLLRAGRARVTSQLSISANENAINWDDLNWERSYHGRRAYSQSKIALGLFGLELDRRSQAGGWGITSNLAHPGIAPTSLLAARPEVGRAKDTPGVRLIRALSRRGILAGTVETALLPALLAATSPDAHGARLYGPSGLGHLSGAPAEQAVYSRLRGEDDAKRIWQISENLTHTSFPADEHARPSPGSTGPGSRRPQ

Samples

Sample ID Description Type Environment
1 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
2 2547132424 Nocardia nova SH22a Isolate Unclassified
3 2643221692 Nocardia sp. Root136 Isolate Unclassified
4 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
5 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
6 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
7 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
8 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
9 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
10 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
11 2808606448 Streptomyces sp. 193411 Isolate Unclassified
12 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
13 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
14 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
15 2867369537 Streptomyces sp. Z26 Isolate Unclassified
16 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
17 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
18 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
19 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
20 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
21 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
22 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
23 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
24 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
25 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
26 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
27 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
28 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
30 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
31 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
32 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
33 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
34 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
37 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
38 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
39 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
40 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
41 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
53 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
54 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
55 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
56 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
57 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
60 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
61 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
62 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
75 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
102 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
105 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
108 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
109 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
110 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
113 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
114 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
115 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
116 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
119 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
120 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
121 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
124 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
125 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
126 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
127 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
128 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
131 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
132 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
133 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
134 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
141 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
144 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
145 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
146 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
149 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
166 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
167 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
168 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
169 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
170 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
171 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
172 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
173 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
174 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
175 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
178 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
179 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.5
Metatranscriptomes 0
Isolates 12.5

Biome Distribution

Category Percentage (%)
Aerial Root 1.25
Bulb 0
Endosphere 10
Nodule 0
Rhizoplane 7.08
Rhizosphere 63.75
Stem 0
Stem Tuber 0
Unclassified 17.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10009288 3300003203 Bacteria 4406
2 rootH1_10075886 3300003316 Bacteria 2740
3 rootH2_10201704 3300003320 Bacteria 2596
4 rootH1_10021445 3300003323 Bacteria 2813
5 Ga0068869_100105913 3300005334 Bacteria 2133
6 Ga0070682_100237269 3300005337 Bacteria 1307
7 Ga0070660_100056905 3300005339 Bacteria 3027
8 Ga0070667_100000617 3300005367 Bacteria 34686
9 Ga0070713_100363446 3300005436 Bacteria 1345
10 Ga0070705_100211122 3300005440 Bacteria 1338
11 Ga0070663_100068837 3300005455 Bacteria 2570
12 Ga0070678_100194368 3300005456 Bacteria 1670
13 Ga0070679_100162266 3300005530 Bacteria 2209
14 Ga0070697_100221997 3300005536 Bacteria 1611
15 Ga0070696_100365959 3300005546 Bacteria 1120
16 Ga0070665_100014788 3300005548 Bacteria 7833
17 Ga0070665_100033042 3300005548 Bacteria 5205
18 Ga0070665_100150410 3300005548 Bacteria 2331
19 Ga0068856_100174912 3300005614 Bacteria 2159
20 Ga0068859_100018689 3300005617 Bacteria 6964
21 Ga0068863_100000626 3300005841 Bacteria 35805
22 Ga0068858_100029535 3300005842 Bacteria 5091
23 Ga0068860_100000430 3300005843 Bacteria 53320
24 Ga0068860_100019439 3300005843 Bacteria 6587
25 Ga0068862_100000490 3300005844 Bacteria 42284
26 Ga0068862_100089888 3300005844 Bacteria 2673
27 Ga0081455_10000169 3300005937 Bacteria 80959
28 Ga0081539_10006332 3300005985 Bacteria 11420
29 Ga0075365_10096751 3300006038 Bacteria 2017
30 Ga0075365_10096867 3300006038 Bacteria 2016
31 Ga0075363_100000109 3300006048 Bacteria 18878
32 Ga0075364_10085669 3300006051 Bacteria 2087
33 Ga0075364_10211341 3300006051 Bacteria 1316
34 Ga0075362_10041903 3300006177 Bacteria 2021
35 Ga0075367_10106758 3300006178 Bacteria 1716
36 Ga0075369_10007824 3300006186 Bacteria 4089
37 Ga0075369_10009893 3300006186 Bacteria 3719
38 Ga0097620_100018688 3300006931 Bacteria 6964
39 Ga0099794_10001969 3300007265 Bacteria 7397
40 Ga0099795_10001509 3300007788 Bacteria 5085
41 Ga0099795_10088340 3300007788 Bacteria 1198
42 Ga0105244_10007673 3300009036 Bacteria 6836
43 Ga0105247_10000040 3300009101 Bacteria 158975
44 Ga0105243_10020466 3300009148 Bacteria 5017
45 Ga0105243_10216403 3300009148 Bacteria 1690
46 Ga0105248_10000357 3300009177 Bacteria 53446
47 Ga0105237_10000203 3300009545 Bacteria 84732
48 Ga0105249_10000069 3300009553 Bacteria 148118
49 Ga0099796_10013325 3300010159 Bacteria 2346
50 Ga0105239_10004757 3300010375 Bacteria 16116
51 Ga0105239_10269017 3300010375 Bacteria 1916
52 Ga0105246_10022510 3300011119 Bacteria 4066
53 Ga0163162_10087894 3300013306 Bacteria 3187
54 Ga0157375_10248574 3300013308 Bacteria 1939
55 Ga0163163_10052587 3300014325 Bacteria 4019
56 Ga0163163_10097205 3300014325 Bacteria 2965
57 Ga0157376_10541293 3300014969 Bacteria 1151
58 Ga0183367_1004 3300015688 Bacteria 716880
59 Ga0207655_1001820 3300025728 Bacteria 18448
60 Ga0207710_10000050 3300025900 Bacteria 186453
61 Ga0207671_10000177 3300025914 Bacteria 97072
62 Ga0207657_10046941 3300025919 Bacteria 3781
63 Ga0207652_10236595 3300025921 Bacteria 1646
64 Ga0207681_10002523 3300025923 Bacteria 11633
65 Ga0207700_10564681 3300025928 Bacteria 1011
66 Ga0207709_10006919 3300025935 Bacteria 6343
67 Ga0207711_10000294 3300025941 Bacteria 53364
68 Ga0207689_10024472 3300025942 Bacteria 5066
69 Ga0207712_10000084 3300025961 Bacteria 107789
70 Ga0207658_10000276 3300025986 Bacteria 53829
71 Ga0207678_10055478 3300026067 Bacteria 3413
72 Ga0207702_10132847 3300026078 Bacteria 2242
73 Ga0207641_10001121 3300026088 Bacteria 26928
74 Ga0209179_1008458 3300027512 Bacteria 1735
75 Ga0209588_1000876 3300027671 Bacteria 7652
76 Ga0268266_10000343 3300028379 Bacteria 72589
77 Ga0268266_10005363 3300028379 Bacteria 11982
78 Ga0268266_10230554 3300028379 Bacteria 1705
79 Ga0268265_10000473 3300028380 Bacteria 42300
80 Ga0268265_10084629 3300028380 Bacteria 2514
81 Ga0268265_10143131 3300028380 Bacteria 2004
82 Ga0268264_10000473 3300028381 Bacteria 54429
83 Ga0268264_10008677 3300028381 Bacteria 8447
84 Ga0316181_1041170 3300030744 Bacteria 1088
85 Ga0307513_10012321 3300031456 Bacteria 10570
86 Ga0307508_10076574 3300031616 Bacteria 2923
87 Ga0307405_10110787 3300031731 Bacteria 1859
88 Ga0307518_10006761 3300031838 Bacteria 8214
89 Ga0307416_100024772 3300032002 Bacteria 4387
90 Ga0307414_10077306 3300032004 Bacteria 2422
91 Ga0307414_10122709 3300032004 Bacteria 2000
92 Ga0316574_0009835 3300035398 Bacteria 5376
93 Ga0395900_0024467 3300037418 Bacteria 6184
94 Ga0439461_0001609 3300041410 Bacteria 3506
95 Ga0439466_0009924 3300041411 Bacteria 3544
96 Ga0439466_0026122 3300041411 Bacteria 2033
97 Ga0439465_0014268 3300041413 Bacteria 2476
98 Ga0451837_1518219 3300041494 Bacteria 1362
99 Ga0439434_0069103 3300042435 Bacteria 1110
100 Ga0466972_0007732 3300044658 Bacteria 5396
101 Ga0466965_0000010 3300044683 Bacteria 112032
102 Ga0466965_0004787 3300044683 Bacteria 6036
103 Ga0466965_0011195 3300044683 Bacteria 4198
104 Ga0466965_0031903 3300044683 Bacteria 2571
105 Ga0466963_0000550 3300044694 Bacteria 17615
106 Ga0466963_0099954 3300044694 Bacteria 1985
107 Ga0466963_0118988 3300044694 Bacteria 1817
108 Ga0466964_0105162 3300044706 Bacteria 1251
109 Ga0466968_0001626 3300044735 Bacteria 8122
110 Ga0466970_0052930 3300044765 Bacteria 2167
111 Ga0466970_0083305 3300044765 Bacteria 1730
112 Ga0466957_0034240 3300044842 Bacteria 3047
113 Ga0466957_0036247 3300044842 Bacteria 2964
114 Ga0466960_0000518 3300044901 Bacteria 13215
115 Ga0466960_0000614 3300044901 Bacteria 12302
116 Ga0466960_0008328 3300044901 Bacteria 4243
117 Ga0466960_0107347 3300044901 Bacteria 1446
118 Ga0466959_0010446 3300045049 Bacteria 6639
119 Ga0466959_0015058 3300045049 Bacteria 5632
120 Ga0466958_0084024 3300045836 Bacteria 1963
121 Ga0466958_0275543 3300045836 Bacteria 1078
122 Ga0495638_0009832 3300046460 Bacteria 6679
123 Ga0495583_0000027 3300046506 Bacteria 256299
124 Ga0495632_0048137 3300046519 Bacteria 2112
125 Ga0495625_0011886 3300046660 Bacteria 7069
126 Ga0495625_0038181 3300046660 Bacteria 3517
127 Ga0495670_0249035 3300046691 Bacteria 947
128 Ga0495672_0165420 3300047320 Bacteria 1133
129 Ga0495687_008023 3300047443 Bacteria 6105
130 Ga0495686_0022643 3300047472 Bacteria 4156
131 Ga0496100_0001341 3300048903 Bacteria 12045
132 Ga0496100_0013035 3300048903 Bacteria 4784
133 Ga0496101_0001123 3300048904 Bacteria 15962
134 Ga0496101_0018680 3300048904 Bacteria 4717
135 Ga0496101_0313918 3300048904 Bacteria 1229
136 Ga0496102_0000016 3300048905 Bacteria 286787
137 Ga0496102_0002172 3300048905 Bacteria 16844
138 Ga0496103_0000015 3300048906 Bacteria 287966
139 Ga0496103_0002450 3300048906 Bacteria 11671
140 Ga0496106_0019278 3300048909 Bacteria 5057
141 Ga0496106_0042741 3300048909 Bacteria 3399
142 Ga0496107_0231788 3300048910 Bacteria 1374
143 Ga0496108_0000020 3300048911 Bacteria 226992
144 Ga0496108_0201047 3300048911 Bacteria 1729
145 Ga0496109_0005729 3300048912 Bacteria 10392
146 Ga0496112_0017378 3300048915 Bacteria 6758
147 Ga0496113_0063106 3300048916 Bacteria 2799
148 Ga0496116_0000055 3300048919 Bacteria 286923
149 Ga0496117_0000006 3300048920 Bacteria 758420
150 Ga0496117_0002514 3300048920 Bacteria 22982
151 Ga0496118_0000004 3300048921 Bacteria 758420
152 Ga0496118_0004912 3300048921 Bacteria 15536
153 Ga0496118_0102996 3300048921 Bacteria 1922
154 Ga0496119_0001368 3300048922 Bacteria 29751
155 Ga0496119_0181616 3300048922 Bacteria 1103
156 Ga0496120_0001445 3300048923 Bacteria 28427
157 Ga0496120_0008238 3300048923 Bacteria 7616
158 Ga0496121_0000258 3300048924 Bacteria 112069
159 Ga0496121_0004087 3300048924 Bacteria 20040
160 Ga0496121_0049077 3300048924 Bacteria 3584
161 Ga0496122_0029618 3300048925 Bacteria 4611
162 Ga0496123_0026778 3300048926 Bacteria 4311
163 Ga0496123_0084624 3300048926 Bacteria 1912
164 Ga0496124_0070023 3300048927 Bacteria 2910
165 Ga0496125_0001185 3300048928 Bacteria 39414
166 Ga0496125_0038963 3300048928 Bacteria 4102
167 Ga0496126_0000089 3300048929 Bacteria 211348
168 Ga0496126_0004411 3300048929 Bacteria 16854
169 Ga0496126_0015905 3300048929 Bacteria 7554
170 Ga0496126_0023235 3300048929 Bacteria 6009
171 Ga0495682_0016738 3300049460 Bacteria 2774
172 Ga0501031_0013913 3300049568 Bacteria 5241
173 Ga0501032_0041135 3300049569 Bacteria 3141
174 Ga0501032_0048999 3300049569 Bacteria 2851
175 Ga0501032_0192516 3300049569 Bacteria 1333
176 Ga0501033_0006605 3300049570 Bacteria 9073
177 Ga0501034_0006407 3300049571 Bacteria 12679
178 Ga0501036_0008848 3300049572 Bacteria 8267
179 Ga0501036_0074553 3300049572 Bacteria 2870
180 Ga0501037_0001713 3300049573 Bacteria 15924
181 Ga0501037_0018518 3300049573 Bacteria 5132
182 Ga0501037_0155026 3300049573 Bacteria 1635
183 Ga0501038_0018480 3300049574 Bacteria 6293
184 Ga0501038_0058387 3300049574 Bacteria 3308
185 Ga0501039_0000299 3300049575 Bacteria 35240
186 Ga0501042_0020815 3300049578 Bacteria 4567
187 Ga0501043_0004121 3300049579 Bacteria 11871
188 Ga0501043_0081059 3300049579 Bacteria 2549
189 Ga0501046_0024335 3300049580 Bacteria 4968
190 Ga0501047_0084575 3300049581 Bacteria 3049
191 Ga0501047_0129141 3300049581 Bacteria 2407
192 Ga0501070_0020902 3300049586 Bacteria 5491
193 Ga0501073_0042764 3300049589 Bacteria 3197
194 Ga0501035_0009444 3300049822 Bacteria 9068
195 Ga0501044_0449944 3300049823 Bacteria 1195
196 nmdc:mga03683_19727_c2 3300050489 Bacteria 1484
197 nmdc:mga03n38_375_c1 3300050490 Bacteria 10969
198 nmdc:mga00v17_22976_c1 3300050491 Bacteria 3604
199 nmdc:mga0yw44_125483_c1 3300050492 Bacteria 1657
200 nmdc:mga0yw44_36532_c1 3300050492 Bacteria 2895
201 nmdc:mga06z11_31722_c1 3300050494 Bacteria 2570
202 nmdc:mga06z11_88179_c1 3300050494 Bacteria 1679
203 nmdc:mga07m45_17445_c1 3300050496 Bacteria 3856
204 nmdc:mga0sz30_8052_c1 3300050516 Bacteria 3970
205 nmdc:mga0sz30_8154_c2 3300050516 Bacteria 2012
206 Ga0500618_000491 3300053125 Bacteria 25309
207 Ga0500642_0061126 3300053130 Bacteria 1692
208 Ga0500658_0025171 3300053134 Bacteria 2286
209 Ga0500604_0000092 3300053151 Bacteria 28708
210 Ga0500616_0000185 3300053153 Bacteria 102736

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300044683 Ga0466965_0004787 Ga0466965_0004787_5228_6016 256
2 3300044765 Ga0466970_0083305 Ga0466970_0083305_922_1710 256
3 3300007788 Ga0099795_10001509 Ga0099795_100015095 276
4 3300027512 Ga0209179_1008458 Ga0209179_10084582 276
5 3300046660 Ga0495625_0038181 Ga0495625_0038181_1662_2564 279
6 3300053130 Ga0500642_0061126 Ga0500642_0061126_26_928 283
7 3300009036 Ga0105244_10007673 Ga0105244_100076732 284
8 3300009148 Ga0105243_10020466 Ga0105243_100204661 284
9 3300025728 Ga0207655_1001820 Ga0207655_10018209 284
10 3300025935 Ga0207709_10006919 Ga0207709_100069191 284
11 3300032004 Ga0307414_10122709 Ga0307414_101227092 284
12 3300044683 Ga0466965_0000010 Ga0466965_0000010_28390_29331 286
13 3300049460 Ga0495682_0016738 Ga0495682_0016738_481_1371 288
14 3300053125 Ga0500618_000491 Ga0500618_000491_9972_10910 289
15 3300044658 Ga0466972_0007732 Ga0466972_0007732_922_1848 295
16 3300044706 Ga0466964_0105162 Ga0466964_0105162_138_1064 295
17 3300044735 Ga0466968_0001626 Ga0466968_0001626_1099_2025 295
18 3300044842 Ga0466957_0034240 Ga0466957_0034240_747_1673 295
19 3300044901 Ga0466960_0000614 Ga0466960_0000614_7458_8384 295
20 3300045049 Ga0466959_0010446 Ga0466959_0010446_437_1363 295
21 3300048904 Ga0496101_0313918 Ga0496101_0313918_193_1122 295
22 3300048915 Ga0496112_0017378 Ga0496112_0017378_486_1415 295
23 3300048916 Ga0496113_0063106 Ga0496113_0063106_1047_1976 295
24 3300048925 Ga0496122_0029618 Ga0496122_0029618_1738_2667 295
25 3300048926 Ga0496123_0026778 Ga0496123_0026778_1438_2367 295
26 3300048929 Ga0496126_0004411 Ga0496126_0004411_9239_10168 295
27 iso_pu_bacteria 2902799365 2902803223 296
28 iso_pu_bacteria 2966924647 2966924835 296
29 3300005334 Ga0068869_100105913 Ga0068869_1001059132 298
30 3300005843 Ga0068860_100019439 Ga0068860_1000194396 298
31 3300005844 Ga0068862_100089888 Ga0068862_1000898882 298
32 3300006038 Ga0075365_10096867 Ga0075365_100968672 298
33 3300006048 Ga0075363_100000109 Ga0075363_1000001094 298
34 3300006051 Ga0075364_10085669 Ga0075364_100856693 298
35 3300006177 Ga0075362_10041903 Ga0075362_100419032 298
36 3300006178 Ga0075367_10106758 Ga0075367_101067582 298
37 3300009148 Ga0105243_10216403 Ga0105243_102164032 298
38 3300010375 Ga0105239_10269017 Ga0105239_102690172 298
39 3300013308 Ga0157375_10248574 Ga0157375_102485743 298
40 3300025942 Ga0207689_10024472 Ga0207689_100244723 298
41 3300028380 Ga0268265_10084629 Ga0268265_100846292 298
42 3300028380 Ga0268265_10143131 Ga0268265_101431312 298
43 3300028381 Ga0268264_10008677 Ga0268264_100086775 298
44 3300030744 Ga0316181_1041170 Ga0316181_10411701 298
45 3300035398 Ga0316574_0009835 Ga0316574_0009835_385_1299 298
46 3300046506 Ga0495583_0000027 Ga0495583_0000027_230667_231587 298
47 3300050490 nmdc:mga03n38_375_c1 nmdc:mga03n38_375_c1_6419_7357 298
48 3300050491 nmdc:mga00v17_22976_c1 nmdc:mga00v17_22976_c1_645_1583 298
49 3300050494 nmdc:mga06z11_88179_c1 nmdc:mga06z11_88179_c1_542_1480 298
50 3300050496 nmdc:mga07m45_17445_c1 nmdc:mga07m45_17445_c1_599_1537 298
51 3300005440 Ga0070705_100211122 Ga0070705_1002111221 299
52 3300005546 Ga0070696_100365959 Ga0070696_1003659591 299
53 3300046460 Ga0495638_0009832 Ga0495638_0009832_2650_3555 299
54 3300046519 Ga0495632_0048137 Ga0495632_0048137_105_1010 299
55 3300046660 Ga0495625_0011886 Ga0495625_0011886_1265_2170 299
56 3300046691 Ga0495670_0249035 Ga0495670_0249035_11_916 299
57 3300053134 Ga0500658_0025171 Ga0500658_0025171_1212_2117 299
58 3300006186 Ga0075369_10007824 Ga0075369_100078244 300
59 3300007265 Ga0099794_10001969 Ga0099794_100019693 300
60 3300007788 Ga0099795_10088340 Ga0099795_100883402 300
61 3300010159 Ga0099796_10013325 Ga0099796_100133253 300
62 3300027671 Ga0209588_1000876 Ga0209588_10008764 300
63 3300050516 nmdc:mga0sz30_8052_c1 nmdc:mga0sz30_8052_c1_1026_1949 300
64 3300005536 Ga0070697_100221997 Ga0070697_1002219972 301
65 3300032004 Ga0307414_10077306 Ga0307414_100773062 301
66 3300037418 Ga0395900_0024467 Ga0395900_0024467_2580_3524 301
67 3300048929 Ga0496126_0015905 Ga0496126_0015905_3267_4175 301
68 3300031731 Ga0307405_10110787 Ga0307405_101107872 302
69 3300032002 Ga0307416_100024772 Ga0307416_1000247723 302
70 iso_pu_bacteria 8016254467 8016256186 302
71 3300049581 Ga0501047_0084575 Ga0501047_0084575_1404_2348 303
72 iso_pu_bacteria 2919042368 2919044392 304
73 iso_pu_bacteria 2984551494 2984552264 304
74 3300049569 Ga0501032_0192516 Ga0501032_0192516_365_1294 306
75 iso_pu_bacteria 2547132111 2547409810 306
76 iso_pu_bacteria 2757320536 2758225674 306
77 iso_pu_bacteria 2877676314 2877676649 306
78 3300053151 Ga0500604_0000092 Ga0500604_0000092_25739_26668 307
79 iso_pu_bacteria 2784132148 2784591563 307
80 iso_pu_bacteria 2808606448 2809235235 307
81 iso_pu_bacteria 2816332119 2816424971 307
82 iso_pu_bacteria 2867369537 2867373515 307
83 3300005339 Ga0070660_100056905 Ga0070660_1000569053 308
84 3300005548 Ga0070665_100150410 Ga0070665_1001504103 308
85 3300006051 Ga0075364_10211341 Ga0075364_102113412 308
86 3300009545 Ga0105237_10000203 Ga0105237_1000020352 308
87 3300010375 Ga0105239_10004757 Ga0105239_100047576 308
88 3300014969 Ga0157376_10541293 Ga0157376_105412931 308
89 3300025914 Ga0207671_10000177 Ga0207671_1000017718 308
90 3300025919 Ga0207657_10046941 Ga0207657_100469414 308
91 3300028379 Ga0268266_10000343 Ga0268266_1000034371 308
92 3300048924 Ga0496121_0049077 Ga0496121_0049077_166_1113 308
93 3300048926 Ga0496123_0084624 Ga0496123_0084624_307_1239 308
94 3300050489 nmdc:mga03683_19727_c2 nmdc:mga03683_19727_c2_427_1353 308
95 3300050494 nmdc:mga06z11_31722_c1 nmdc:mga06z11_31722_c1_1408_2349 308
96 iso_pu_bacteria 2643221692 2644517080 308
97 iso_pu_bacteria 2852643534 2852643802 308
98 iso_pu_bacteria 2929212328 2929213284 308
99 iso_pu_bacteria 2954731030 2954740020 308
100 3300044683 Ga0466965_0031903 Ga0466965_0031903_391_1323 309
101 3300044765 Ga0466970_0052930 Ga0466970_0052930_936_1868 309
102 3300044842 Ga0466957_0036247 Ga0466957_0036247_720_1652 309
103 3300044901 Ga0466960_0008328 Ga0466960_0008328_887_1819 309
104 3300045049 Ga0466959_0015058 Ga0466959_0015058_1978_2910 309
105 3300045836 Ga0466958_0275543 Ga0466958_0275543_80_1012 309
106 3300048921 Ga0496118_0102996 Ga0496118_0102996_313_1245 309
107 3300048928 Ga0496125_0001185 Ga0496125_0001185_3360_4292 309
108 iso_pu_bacteria 2643221694 2644526901 309
109 iso_pu_bacteria 2721755702 2723643413 309
110 iso_pu_bacteria 2773857762 2774396962 309
111 iso_pu_bacteria 2802429296 2804848074 309
112 iso_pu_bacteria 8025413630 8025416237 309
113 3300003316 rootH1_10075886 rootH1_100758864 310
114 3300003320 rootH2_10201704 rootH2_102017041 310
115 3300003323 rootH1_10021445 rootH1_100214454 310
116 3300031616 Ga0307508_10076574 Ga0307508_100765742 310
117 3300041410 Ga0439461_0001609 Ga0439461_0001609_1225_2160 310
118 3300041411 Ga0439466_0026122 Ga0439466_0026122_1009_1944 310
119 3300041413 Ga0439465_0014268 Ga0439465_0014268_768_1703 310
120 3300042435 Ga0439434_0069103 Ga0439434_0069103_83_1018 310
121 3300049569 Ga0501032_0041135 Ga0501032_0041135_1120_2055 310
122 3300049571 Ga0501034_0006407 Ga0501034_0006407_1608_2543 310
123 3300049572 Ga0501036_0008848 Ga0501036_0008848_3625_4560 310
124 3300049573 Ga0501037_0001713 Ga0501037_0001713_2589_3524 310
125 3300049574 Ga0501038_0018480 Ga0501038_0018480_4105_5040 310
126 3300049575 Ga0501039_0000299 Ga0501039_0000299_5273_6208 310
127 3300049579 Ga0501043_0081059 Ga0501043_0081059_1571_2506 310
128 3300049586 Ga0501070_0020902 Ga0501070_0020902_1052_1987 310
129 3300049589 Ga0501073_0042764 Ga0501073_0042764_1349_2284 310
130 iso_pu_bacteria 2739367654 2739606511 310
131 iso_pu_bacteria 2984576629 2984578784 310
132 iso_pu_bacteria 2990256926 2990257964 310
133 3300006186 Ga0075369_10009893 Ga0075369_100098934 311
134 3300031456 Ga0307513_10012321 Ga0307513_1001232110 311
135 3300041411 Ga0439466_0009924 Ga0439466_0009924_697_1635 311
136 3300044694 Ga0466963_0000550 Ga0466963_0000550_5544_6482 311
137 3300048903 Ga0496100_0001341 Ga0496100_0001341_4576_5514 311
138 3300048904 Ga0496101_0001123 Ga0496101_0001123_10432_11370 311
139 3300048905 Ga0496102_0000016 Ga0496102_0000016_25650_26588 311
140 3300048906 Ga0496103_0000015 Ga0496103_0000015_260187_261125 311
141 3300048909 Ga0496106_0019278 Ga0496106_0019278_3954_4892 311
142 3300048919 Ga0496116_0000055 Ga0496116_0000055_260364_261302 311
143 3300048920 Ga0496117_0000006 Ga0496117_0000006_497283_498221 311
144 3300048921 Ga0496118_0000004 Ga0496118_0000004_497283_498221 311
145 3300048922 Ga0496119_0001368 Ga0496119_0001368_25654_26592 311
146 3300048922 Ga0496119_0181616 Ga0496119_0181616_34_972 311
147 3300048923 Ga0496120_0001445 Ga0496120_0001445_26042_26980 311
148 3300048924 Ga0496121_0000258 Ga0496121_0000258_108683_109621 311
149 3300048929 Ga0496126_0000089 Ga0496126_0000089_202858_203796 311
150 3300049569 Ga0501032_0048999 Ga0501032_0048999_436_1374 311
151 3300049570 Ga0501033_0006605 Ga0501033_0006605_3042_3980 311
152 3300049572 Ga0501036_0074553 Ga0501036_0074553_1407_2345 311
153 3300049573 Ga0501037_0018518 Ga0501037_0018518_1706_2644 311
154 3300049573 Ga0501037_0155026 Ga0501037_0155026_611_1549 311
155 3300049574 Ga0501038_0058387 Ga0501038_0058387_1538_2476 311
156 3300049578 Ga0501042_0020815 Ga0501042_0020815_1460_2398 311
157 3300049579 Ga0501043_0004121 Ga0501043_0004121_5988_6926 311
158 3300049580 Ga0501046_0024335 Ga0501046_0024335_1707_2645 311
159 3300049581 Ga0501047_0129141 Ga0501047_0129141_956_1894 311
160 3300049822 Ga0501035_0009444 Ga0501035_0009444_1242_2180 311
161 3300050516 nmdc:mga0sz30_8154_c2 nmdc:mga0sz30_8154_c2_269_1207 311
162 3300005367 Ga0070667_100000617 Ga0070667_10000061730 312
163 3300005548 Ga0070665_100014788 Ga0070665_1000147887 312
164 3300005617 Ga0068859_100018689 Ga0068859_1000186894 312
165 3300005841 Ga0068863_100000626 Ga0068863_10000062627 312
166 3300005842 Ga0068858_100029535 Ga0068858_1000295358 312
167 3300005843 Ga0068860_100000430 Ga0068860_10000043047 312
168 3300005844 Ga0068862_100000490 Ga0068862_10000049018 312
169 3300006931 Ga0097620_100018688 Ga0097620_1000186884 312
170 3300009101 Ga0105247_10000040 Ga0105247_1000004039 312
171 3300009177 Ga0105248_10000357 Ga0105248_1000035748 312
172 3300009553 Ga0105249_10000069 Ga0105249_1000006934 312
173 3300013306 Ga0163162_10087894 Ga0163162_100878941 312
174 3300014325 Ga0163163_10052587 Ga0163163_100525873 312
175 3300025900 Ga0207710_10000050 Ga0207710_1000005069 312
176 3300025923 Ga0207681_10002523 Ga0207681_100025233 312
177 3300025941 Ga0207711_10000294 Ga0207711_1000029446 312
178 3300025961 Ga0207712_10000084 Ga0207712_1000008433 312
179 3300025986 Ga0207658_10000276 Ga0207658_1000027612 312
180 3300026088 Ga0207641_10001121 Ga0207641_100011214 312
181 3300028379 Ga0268266_10005363 Ga0268266_100053633 312
182 3300028380 Ga0268265_10000473 Ga0268265_1000047333 312
183 3300028381 Ga0268264_10000473 Ga0268264_1000047347 312
184 3300041494 Ga0451837_1518219 Ga0451837_1518219_66_1043 312
185 3300044694 Ga0466963_0099954 Ga0466963_0099954_551_1492 312
186 3300044901 Ga0466960_0107347 Ga0466960_0107347_138_1079 312
187 3300047320 Ga0495672_0165420 Ga0495672_0165420_168_1109 312
188 3300047472 Ga0495686_0022643 Ga0495686_0022643_1902_2843 312
189 3300048903 Ga0496100_0013035 Ga0496100_0013035_3324_4265 312
190 3300048904 Ga0496101_0018680 Ga0496101_0018680_568_1509 312
191 3300048905 Ga0496102_0002172 Ga0496102_0002172_9159_10100 312
192 3300048906 Ga0496103_0002450 Ga0496103_0002450_9134_10075 312
193 3300048909 Ga0496106_0042741 Ga0496106_0042741_1021_1962 312
194 3300048910 Ga0496107_0231788 Ga0496107_0231788_61_1002 312
195 3300048920 Ga0496117_0002514 Ga0496117_0002514_8348_9289 312
196 3300048921 Ga0496118_0004912 Ga0496118_0004912_7800_8741 312
197 3300048923 Ga0496120_0008238 Ga0496120_0008238_2444_3385 312
198 3300048924 Ga0496121_0004087 Ga0496121_0004087_11816_12757 312
199 3300048927 Ga0496124_0070023 Ga0496124_0070023_737_1678 312
200 3300048928 Ga0496125_0038963 Ga0496125_0038963_21_962 312
201 3300048929 Ga0496126_0023235 Ga0496126_0023235_3853_4794 312
202 3300049568 Ga0501031_0013913 Ga0501031_0013913_1999_2940 312
203 3300049823 Ga0501044_0449944 Ga0501044_0449944_164_1105 312
204 iso_pu_bacteria 2875391855 2875393701 312
205 3300006038 Ga0075365_10096751 Ga0075365_100967512 313
206 3300044683 Ga0466965_0011195 Ga0466965_0011195_265_1209 313
207 3300044901 Ga0466960_0000518 Ga0466960_0000518_6144_7088 313
208 3300050492 nmdc:mga0yw44_125483_c1 nmdc:mga0yw44_125483_c1_308_1252 313
209 3300053153 Ga0500616_0000185 Ga0500616_0000185_10005_10949 313
210 iso_pu_bacteria 2891326441 2891330655 314
211 3300005530 Ga0070679_100162266 Ga0070679_1001622662 315
212 3300025921 Ga0207652_10236595 Ga0207652_102365951 315
213 3300050492 nmdc:mga0yw44_36532_c1 nmdc:mga0yw44_36532_c1_1176_2126 315
214 3300005337 Ga0070682_100237269 Ga0070682_1002372692 316
215 3300005436 Ga0070713_100363446 Ga0070713_1003634462 316
216 3300005455 Ga0070663_100068837 Ga0070663_1000688373 316
217 3300005456 Ga0070678_100194368 Ga0070678_1001943681 316
218 3300005548 Ga0070665_100033042 Ga0070665_1000330425 316
219 3300005614 Ga0068856_100174912 Ga0068856_1001749122 316
220 3300011119 Ga0105246_10022510 Ga0105246_100225102 316
221 3300014325 Ga0163163_10097205 Ga0163163_100972052 316
222 3300025928 Ga0207700_10564681 Ga0207700_105646811 316
223 3300026067 Ga0207678_10055478 Ga0207678_100554784 316
224 3300026078 Ga0207702_10132847 Ga0207702_101328472 316
225 3300028379 Ga0268266_10230554 Ga0268266_102305541 316
226 3300048911 Ga0496108_0201047 Ga0496108_0201047_540_1496 316
227 iso_pu_bacteria 2547132424 2548697960 317
228 iso_pu_bacteria 2862290372 2862296826 317
229 iso_pu_bacteria 2912757875 2912764655 317
230 3300031838 Ga0307518_10006761 Ga0307518_100067618 318
231 iso_pu_bacteria 8056207758 8056213015 318
232 3300048912 Ga0496109_0005729 Ga0496109_0005729_5415_6377 319
233 3300015688 Ga0183367_1004 Ga0183367_1004270 320
234 3300044694 Ga0466963_0118988 Ga0466963_0118988_504_1478 320
235 3300045836 Ga0466958_0084024 Ga0466958_0084024_136_1110 320
236 3300048911 Ga0496108_0000020 Ga0496108_0000020_191465_192439 321
237 3300003203 JGI25406J46586_10009288 JGI25406J46586_100092884 322
238 3300005937 Ga0081455_10000169 Ga0081455_1000016978 322
239 3300005985 Ga0081539_10006332 Ga0081539_100063324 322
240 3300047443 Ga0495687_008023 Ga0495687_008023_3625_4692 322

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

39

245

0.8

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

45

253

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rd5-assembly1.cif.gz_A crystal structure of a putative uncharacterized protein from mycobacterium paratuberculosis 0.933 10 312
3rd5-assembly1.cif.gz_A crystal structure of a putative uncharacterized protein from mycobacterium paratuberculosis 0.9058 10 312
7jk9-assembly1.cif.gz_A helical filaments of plant light-dependent protochlorophyllide oxidoreductase (lpor) bound to nadph, pchlide, and membrane 0.8635 13 306
6l1h-assembly2.cif.gz_B crystal structure of light-dependent protochlorophyllide oxidoreductase from thermosynechococcus elongatus 0.8569 16 307
3gem-assembly1.cif.gz_B crystal structure of short-chain dehydrogenase from pseudomonas syringae 0.8552 13 207
ID Description Score Start End Superfamily
af_A0A368UI72_22_109_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9832 11 88 3.40.50.720
af_O53537_4_315_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9592 7 312 3.40.50.720
af_O53537_4_315_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9381 7 312 3.40.50.720
3rd5A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.933 10 312 3.40.50.720
af_Q0JBH4_12_100_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9265 16 102 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0F7RTQ8-F1-model_v4 Oxidoreductase, short-chain dehydrogenase 0.9897 10 139
AF-A0A673C6W2-F1-model_v4 Retinol dehydrogenase 12 0.9765 7 207 GO:0016491
AF-A0A2R6LQX0-F1-model_v4 Short-chain dehydrogenase 0.9759 7 192 GO:0016491
AF-A0A537YBU9-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9752 7 75 GO:0016491
AF-A0A667YLY6-F1-model_v4 Zgc:153441 0.974 7 195 GO:0016491

Feature Viewer

pLDDT pTM Quality
88.53 0.87 High
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Predicted Structure (AlphaFold2)

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