F353122

General Info

Members Datasets Scaffolds Average Seq Length
240 178 480 275

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0587567|Ga0453684_0587567_105_1004
Length 299
Sequence MGVRQDVGRPWFWFLPGILEDCTVSTIEEDVRQGRLEEALAGVQAAIRKAPADSKHRVLLFQLLSLTGDWNRAMTQLNVLGDMDAKSLPMVQTYRAALLCEELRAEVFAGKRTPLFFGEPARWTALLVQALMLRAQGQSAEADKLHAEALELAPASTGKLDNQPFAWLADADSRLGPMLEAIIDGKYYWIPFANLREIVIEKPADLRDLAWIPAFLTLSNGGQVVALLPARYPGSEKATEAALRMARKTEWVAAQDGATTGLGQRLLATDQGDYPLLEIRSIAFDPAAEPVAQTASENG

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
9 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
10 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
11 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
12 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
50 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
55 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
56 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
58 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
83 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
84 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
85 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
86 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
87 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
90 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
91 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
92 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
93 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
94 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
95 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
96 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
97 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
98 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
99 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
100 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
101 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
102 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
103 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
104 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
105 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
111 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
112 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
113 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
114 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
115 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
116 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
117 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
118 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
119 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
120 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
121 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
122 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
125 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
126 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
127 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
128 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
129 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
132 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
133 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
134 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
135 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
136 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
137 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
138 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
139 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
144 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
145 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
146 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
147 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
162 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
170 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
173 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
176 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
177 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
178 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.75
Metatranscriptomes 0
Isolates 1.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.58
Nodule 0
Rhizoplane 0
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 7.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0587567 3300044712 Bacteria 1222
2 JGI25156J39149_1000484 3300002705 Bacteria 23873
3 JGI25154J39366_1000539 3300002738 Bacteria 18841
4 JGI25157J39369_1000018 3300002741 Bacteria 177410
5 rootH2_10142695 3300003320 Bacteria 3501
6 rootH2_10208443 3300003320 Bacteria 1498
7 rootL2_10007042 3300003322 Bacteria 30124
8 rootL2_10059396 3300003322 Bacteria 6654
9 rootH1_10000406 3300003323 Bacteria 2609
10 rootH1_10000407 3300003323 Bacteria 12296
11 rootH1_10003579 3300003323 Bacteria 6726
12 rootH1_10100704 3300003323 Bacteria 2240
13 Ga0055539_1000437 3300003752 Bacteria 14566
14 Ga0055539_1003234 3300003752 Bacteria 2309
15 Ga0055533_1000011 3300003756 Bacteria 467893
16 Ga0055525_1000986 3300003759 Bacteria 7674
17 Ga0055535_1000107 3300003761 Bacteria 89840
18 Ga0055529_1000111 3300003763 Bacteria 118734
19 Ga0055531_10000046 3300003794 Bacteria 131979
20 Ga0070658_10004674 3300005327 Bacteria 11133
21 Ga0070658_10249924 3300005327 Bacteria 1504
22 Ga0070658_10329383 3300005327 Bacteria 1305
23 Ga0070658_10618730 3300005327 Bacteria 939
24 Ga0070680_100019303 3300005336 Bacteria 5402
25 Ga0068868_100200794 3300005338 Bacteria 1662
26 Ga0068868_100330629 3300005338 Bacteria 1301
27 Ga0070660_100040151 3300005339 Bacteria 3560
28 Ga0070660_100283709 3300005339 Bacteria 1355
29 Ga0070689_100001730 3300005340 Bacteria 13955
30 Ga0070673_100098817 3300005364 Bacteria 2400
31 Ga0070688_100054717 3300005365 Unclassified 2500
32 Ga0070659_100145840 3300005366 Bacteria 1928
33 Ga0070713_100187488 3300005436 Bacteria 1862
34 Ga0070713_100395759 3300005436 Bacteria 1289
35 Ga0070713_100435628 3300005436 Bacteria 1229
36 Ga0070705_100193905 3300005440 Unclassified 1387
37 Ga0070681_10004052 3300005458 Bacteria 13833
38 Ga0070681_10049576 3300005458 Bacteria 4192
39 Ga0070685_10077918 3300005466 Unclassified 1980
40 Ga0070679_100033817 3300005530 Bacteria 5063
41 Ga0070679_100077649 3300005530 Bacteria 3310
42 Ga0068855_100013591 3300005563 Bacteria 9816
43 Ga0068857_100002715 3300005577 Bacteria 14528
44 Ga0068854_100019444 3300005578 Bacteria 4577
45 Ga0068856_100003249 3300005614 Bacteria 16544
46 Ga0068866_10097624 3300005718 Unclassified 1614
47 Ga0068861_100011157 3300005719 Bacteria 6239
48 Ga0068861_100044247 3300005719 Bacteria 3347
49 Ga0068858_100015497 3300005842 Bacteria 7169
50 Ga0068860_100376566 3300005843 Unclassified 1401
51 Ga0068860_100637009 3300005843 Bacteria 1073
52 Ga0070717_10119493 3300006028 Bacteria 2256
53 Ga0070716_100098041 3300006173 Bacteria 1790
54 Ga0097621_100112901 3300006237 Bacteria 2298
55 Ga0068871_100013449 3300006358 Bacteria 6075
56 Ga0068871_100417833 3300006358 Unclassified 1197
57 Ga0075429_100021139 3300006880 Bacteria 5642
58 Ga0105240_10059974 3300009093 Bacteria 4745
59 Ga0105240_10179413 3300009093 Bacteria 2501
60 Ga0105240_10278643 3300009093 Bacteria 1922
61 Ga0111539_10231148 3300009094 Bacteria 2153
62 Ga0105242_10224145 3300009176 Bacteria 1682
63 Ga0105237_10002816 3300009545 Bacteria 21136
64 Ga0105239_10042087 3300010375 Bacteria 5005
65 Ga0105239_10084418 3300010375 Bacteria 3498
66 Ga0105239_10087794 3300010375 Unclassified 3429
67 Ga0157371_10148197 3300013102 Bacteria 1673
68 Ga0157372_11067256 3300013307 Bacteria 935
69 Ga0163163_10280271 3300014325 Unclassified 1718
70 Ga0157376_10097344 3300014969 Unclassified 2563
71 Ga0182007_10030513 3300015262 Bacteria 1842
72 Ga0209674_100003 3300025226 Bacteria 2196646
73 Ga0209563_100010 3300025230 Bacteria 1337457
74 Ga0207427_100392 3300025231 Bacteria 26004
75 Ga0209258_100267 3300025242 Bacteria 89896
76 Ga0209258_101147 3300025242 Bacteria 10870
77 Ga0209646_1000188 3300025246 Bacteria 76972
78 Ga0209026_1000033 3300025250 Bacteria 318512
79 Ga0209026_1015358 3300025250 Bacteria 1258
80 Ga0209677_100068 3300025253 Bacteria 146135
81 Ga0209677_100159 3300025253 Bacteria 61322
82 Ga0209677_100896 3300025253 Bacteria 14589
83 Ga0209759_1000024 3300025256 Bacteria 318512
84 Ga0209759_1001433 3300025256 Bacteria 13486
85 Ga0209759_1001545 3300025256 Bacteria 12611
86 Ga0209759_1005601 3300025256 Bacteria 4357
87 Ga0209759_1005897 3300025256 Bacteria 4192
88 Ga0209455_1000158 3300025272 Bacteria 118973
89 Ga0209051_1002773 3300025303 Bacteria 12095
90 Ga0207642_10224317 3300025899 Unclassified 1052
91 Ga0207705_10039293 3300025909 Bacteria 3391
92 Ga0207707_10008720 3300025912 Bacteria 8797
93 Ga0207707_10009463 3300025912 Bacteria 8448
94 Ga0207695_10052701 3300025913 Bacteria 4260
95 Ga0207695_10108386 3300025913 Bacteria 2762
96 Ga0207671_10038976 3300025914 Bacteria 3520
97 Ga0207660_10016570 3300025917 Bacteria 4879
98 Ga0207657_10214958 3300025919 Bacteria 1542
99 Ga0207652_10089294 3300025921 Bacteria 2706
100 Ga0207652_10134286 3300025921 Bacteria 2209
101 Ga0207694_10163786 3300025924 Bacteria 1797
102 Ga0207690_10323928 3300025932 Bacteria 1212
103 Ga0207709_10255902 3300025935 Bacteria 1281
104 Ga0207670_10001268 3300025936 Bacteria 13343
105 Ga0207665_10099209 3300025939 Bacteria 2031
106 Ga0207689_10113524 3300025942 Bacteria 2227
107 Ga0207661_10392204 3300025944 Bacteria 1258
108 Ga0207667_10063654 3300025949 Bacteria 3853
109 Ga0207651_10057848 3300025960 Bacteria 2676
110 Ga0207677_10143150 3300026023 Bacteria 1834
111 Ga0207702_10000553 3300026078 Bacteria 41640
112 Ga0207674_10004589 3300026116 Bacteria 16584
113 Ga0207674_10022468 3300026116 Bacteria 6771
114 Ga0207675_100017993 3300026118 Bacteria 6591
115 Ga0207675_100025157 3300026118 Bacteria 5539
116 Ga0207698_10082890 3300026142 Bacteria 2594
117 Ga0265337_1017688 3300028556 Bacteria 2281
118 Ga0265326_10048073 3300028558 Bacteria 1210
119 Ga0265319_1004099 3300028563 Bacteria 7332
120 Ga0265318_10001377 3300028577 Bacteria 14426
121 Ga0265323_10006668 3300028653 Bacteria 4840
122 Ga0265336_10000008 3300028666 Bacteria 336082
123 Ga0265338_10009863 3300028800 Bacteria 11309
124 Ga0265338_10024264 3300028800 Bacteria 6200
125 Ga0265338_10378618 3300028800 Unclassified 1013
126 Ga0265324_10000093 3300029957 Bacteria 69020
127 Ga0265324_10000232 3300029957 Bacteria 42039
128 Ga0265324_10026781 3300029957 Bacteria 2039
129 Ga0265324_10089331 3300029957 Bacteria 1048
130 Ga0265330_10004170 3300031235 Bacteria 7380
131 Ga0265330_10108026 3300031235 Bacteria 1189
132 Ga0265320_10002706 3300031240 Bacteria 12262
133 Ga0265325_10000861 3300031241 Bacteria 21888
134 Ga0265329_10000102 3300031242 Bacteria 40580
135 Ga0265340_10000413 3300031247 Bacteria 22922
136 Ga0265339_10000001 3300031249 Bacteria 613713
137 Ga0265339_10027657 3300031249 Bacteria 3233
138 Ga0265331_10001971 3300031250 Bacteria 14335
139 Ga0265331_10046720 3300031250 Bacteria 2086
140 Ga0265316_10000102 3300031344 Bacteria 92202
141 Ga0265316_10020426 3300031344 Bacteria 5635
142 Ga0265316_10057640 3300031344 Bacteria 3028
143 Ga0307509_10000036 3300031507 Bacteria 190164
144 Ga0265313_10017322 3300031595 Bacteria 4100
145 Ga0265313_10037480 3300031595 Bacteria 2424
146 Ga0265314_10000009 3300031711 Bacteria 476805
147 Ga0265314_10003406 3300031711 Bacteria 15402
148 Ga0265314_10038115 3300031711 Bacteria 3476
149 Ga0265314_10111974 3300031711 Bacteria 1733
150 Ga0265342_10000618 3300031712 Bacteria 37365
151 Ga0265342_10001274 3300031712 Bacteria 23710
152 Ga0265342_10100969 3300031712 Unclassified 1643
153 Ga0316576_10196938 3300031727 Unclassified 1518
154 Ga0307516_10000517 3300031730 Bacteria 51613
155 Ga0373934_0002760 3300035086 Bacteria 6439
156 Ga0373923_0066221 3300035111 Bacteria 1544
157 Ga0373937_1100576 3300036401 Bacteria 743
158 Ga0395898_0056005 3300037466 Bacteria 3845
159 Ga0395905_0014221 3300037471 Bacteria 7602
160 Ga0395905_0269920 3300037471 Bacteria 1587
161 Ga0395901_0021028 3300038443 Bacteria 6684
162 Ga0400483_264788 3300039062 Bacteria 5465
163 Ga0466969_0043157 3300044656 Bacteria 2247
164 Ga0466965_0003022 3300044683 Bacteria 7311
165 Ga0466966_0004881 3300044684 Bacteria 8821
166 Ga0466961_0032877 3300044693 Bacteria 3332
167 Ga0466963_0259543 3300044694 Bacteria 1220
168 Ga0466964_0005333 3300044706 Bacteria 4773
169 Ga0453684_0041985 3300044712 Bacteria 6173
170 Ga0453684_0058447 3300044712 Bacteria 4981
171 Ga0466971_0002466 3300044719 Bacteria 7814
172 Ga0466968_0142691 3300044735 Bacteria 1096
173 Ga0466970_0030348 3300044765 Bacteria 2850
174 Ga0466957_0001848 3300044842 Bacteria 11176
175 Ga0466960_0073405 3300044901 Bacteria 1707
176 Ga0466959_0004099 3300045049 Bacteria 9705
177 Ga0451576_0010830 3300045051 Bacteria 10439
178 Ga0466958_0000968 3300045836 Bacteria 12968
179 Ga0495592_0000088 3300046454 Bacteria 81548
180 Ga0495638_0011523 3300046460 Bacteria 6089
181 Ga0495638_0042901 3300046460 Bacteria 2856
182 Ga0495639_0011083 3300046475 Bacteria 3885
183 Ga0495662_0131093 3300046476 Unclassified 1232
184 Ga0495583_0000558 3300046506 Bacteria 51961
185 Ga0495583_0042579 3300046506 Bacteria 2119
186 Ga0495606_0028516 3300046507 Bacteria 3938
187 Ga0495616_0003074 3300046513 Bacteria 10814
188 Ga0495618_0021631 3300046514 Bacteria 3966
189 Ga0495628_0000173 3300046516 Bacteria 56657
190 Ga0495628_0190167 3300046516 Unclassified 1550
191 Ga0495630_0003126 3300046517 Bacteria 11481
192 Ga0495648_0090403 3300046524 Bacteria 1716
193 Ga0495652_0125878 3300046529 Bacteria 2036
194 Ga0495640_0020211 3300046533 Bacteria 4904
195 Ga0495586_0001601 3300046535 Bacteria 12441
196 Ga0495645_0008469 3300046543 Bacteria 7182
197 Ga0495645_0030100 3300046543 Unclassified 3954
198 Ga0495625_0003521 3300046660 Bacteria 15504
199 Ga0495625_0053202 3300046660 Bacteria 2897
200 Ga0495599_0002914 3300046678 Bacteria 9947
201 Ga0495599_0007977 3300046678 Bacteria 6424
202 Ga0495623_0196777 3300046679 Unclassified 1161
203 Ga0495658_0203811 3300046683 Unclassified 1234
204 Ga0495649_0001365 3300046694 Bacteria 18541
205 Ga0495589_0005747 3300046794 Bacteria 6540
206 Ga0495581_0066319 3300047315 Bacteria 2087
207 Ga0501031_0003574 3300049568 Bacteria 9993
208 Ga0501032_0002189 3300049569 Bacteria 15370
209 Ga0501034_0157231 3300049571 Bacteria 2246
210 Ga0501036_0000759 3300049572 Bacteria 23917
211 Ga0501037_0000382 3300049573 Bacteria 36888
212 Ga0501038_0000641 3300049574 Bacteria 31082
213 Ga0501039_0016751 3300049575 Bacteria 5616
214 Ga0501042_0024902 3300049578 Bacteria 4200
215 Ga0501043_0019778 3300049579 Bacteria 5287
216 Ga0501046_0005932 3300049580 Bacteria 10879
217 Ga0501046_0122131 3300049580 Bacteria 1981
218 Ga0501047_0017377 3300049581 Bacteria 6888
219 Ga0501048_0003057 3300049582 Bacteria 12752
220 Ga0501068_0066326 3300049584 Bacteria 2198
221 Ga0501070_0050522 3300049586 Bacteria 3452
222 Ga0501072_0218414 3300049588 Bacteria 1519
223 Ga0501083_0190267 3300049744 Bacteria 1339
224 Ga0501035_0007018 3300049822 Bacteria 10523
225 Ga0501044_0012997 3300049823 Bacteria 9012
226 nmdc:mga0k408_65342_c1 3300050493 Bacteria 2118
227 nmdc:mga07m45_4315_c1 3300050496 Bacteria 6956
228 nmdc:mga09592_58904_c1 3300050508 Bacteria 3247
229 nmdc:mga08y16_176416_c1 3300050511 Bacteria 2219
230 Ga0495601_0446838 3300053077 Unclassified 836
231 Ga0500635_0000225 3300053080 Bacteria 25860
232 Ga0500635_0007389 3300053080 Bacteria 2978
233 Ga0495619_0125860 3300053085 Bacteria 1758
234 Ga0500616_0000105 3300053153 Bacteria 157881
235 Ga0500636_0022512 3300053177 Bacteria 3726
236 Ga0501084_0432361 3300054114 Bacteria 1113
237 Ga0530510_0083599 3300061734 Bacteria 2325
238 2746087862 2744054900 Bacteria 8399525
239 2746094344 2744054901 Bacteria 8397047
240 8001523631 8001522603 Bacteria 4726425
241 Ga0453684_0587567
242 JGI25156J39149_1000484
243 JGI25154J39366_1000539
244 JGI25157J39369_1000018
245 rootH2_10142695
246 rootH2_10208443
247 rootL2_10007042
248 rootL2_10059396
249 rootH1_10000406
250 rootH1_10000407
251 rootH1_10003579
252 rootH1_10100704
253 Ga0055539_1000437
254 Ga0055539_1003234
255 Ga0055533_1000011
256 Ga0055525_1000986
257 Ga0055535_1000107
258 Ga0055529_1000111
259 Ga0055531_10000046
260 Ga0070658_10004674
261 Ga0070658_10249924
262 Ga0070658_10329383
263 Ga0070658_10618730
264 Ga0070680_100019303
265 Ga0068868_100200794
266 Ga0068868_100330629
267 Ga0070660_100040151
268 Ga0070660_100283709
269 Ga0070689_100001730
270 Ga0070673_100098817
271 Ga0070688_100054717
272 Ga0070659_100145840
273 Ga0070713_100187488
274 Ga0070713_100395759
275 Ga0070713_100435628
276 Ga0070705_100193905
277 Ga0070681_10004052
278 Ga0070681_10049576
279 Ga0070685_10077918
280 Ga0070679_100033817
281 Ga0070679_100077649
282 Ga0068855_100013591
283 Ga0068857_100002715
284 Ga0068854_100019444
285 Ga0068856_100003249
286 Ga0068866_10097624
287 Ga0068861_100011157
288 Ga0068861_100044247
289 Ga0068858_100015497
290 Ga0068860_100376566
291 Ga0068860_100637009
292 Ga0070717_10119493
293 Ga0070716_100098041
294 Ga0097621_100112901
295 Ga0068871_100013449
296 Ga0068871_100417833
297 Ga0075429_100021139
298 Ga0105240_10059974
299 Ga0105240_10179413
300 Ga0105240_10278643
301 Ga0111539_10231148
302 Ga0105242_10224145
303 Ga0105237_10002816
304 Ga0105239_10042087
305 Ga0105239_10084418
306 Ga0105239_10087794
307 Ga0157371_10148197
308 Ga0157372_11067256
309 Ga0163163_10280271
310 Ga0157376_10097344
311 Ga0182007_10030513
312 Ga0209674_100003
313 Ga0209563_100010
314 Ga0207427_100392
315 Ga0209258_100267
316 Ga0209258_101147
317 Ga0209646_1000188
318 Ga0209026_1000033
319 Ga0209026_1015358
320 Ga0209677_100068
321 Ga0209677_100159
322 Ga0209677_100896
323 Ga0209759_1000024
324 Ga0209759_1001433
325 Ga0209759_1001545
326 Ga0209759_1005601
327 Ga0209759_1005897
328 Ga0209455_1000158
329 Ga0209051_1002773
330 Ga0207642_10224317
331 Ga0207705_10039293
332 Ga0207707_10008720
333 Ga0207707_10009463
334 Ga0207695_10052701
335 Ga0207695_10108386
336 Ga0207671_10038976
337 Ga0207660_10016570
338 Ga0207657_10214958
339 Ga0207652_10089294
340 Ga0207652_10134286
341 Ga0207694_10163786
342 Ga0207690_10323928
343 Ga0207709_10255902
344 Ga0207670_10001268
345 Ga0207665_10099209
346 Ga0207689_10113524
347 Ga0207661_10392204
348 Ga0207667_10063654
349 Ga0207651_10057848
350 Ga0207677_10143150
351 Ga0207702_10000553
352 Ga0207674_10004589
353 Ga0207674_10022468
354 Ga0207675_100017993
355 Ga0207675_100025157
356 Ga0207698_10082890
357 Ga0265337_1017688
358 Ga0265326_10048073
359 Ga0265319_1004099
360 Ga0265318_10001377
361 Ga0265323_10006668
362 Ga0265336_10000008
363 Ga0265338_10009863
364 Ga0265338_10024264
365 Ga0265338_10378618
366 Ga0265324_10000093
367 Ga0265324_10000232
368 Ga0265324_10026781
369 Ga0265324_10089331
370 Ga0265330_10004170
371 Ga0265330_10108026
372 Ga0265320_10002706
373 Ga0265325_10000861
374 Ga0265329_10000102
375 Ga0265340_10000413
376 Ga0265339_10000001
377 Ga0265339_10027657
378 Ga0265331_10001971
379 Ga0265331_10046720
380 Ga0265316_10000102
381 Ga0265316_10020426
382 Ga0265316_10057640
383 Ga0307509_10000036
384 Ga0265313_10017322
385 Ga0265313_10037480
386 Ga0265314_10000009
387 Ga0265314_10003406
388 Ga0265314_10038115
389 Ga0265314_10111974
390 Ga0265342_10000618
391 Ga0265342_10001274
392 Ga0265342_10100969
393 Ga0316576_10196938
394 Ga0307516_10000517
395 Ga0373934_0002760
396 Ga0373923_0066221
397 Ga0373937_1100576
398 Ga0395898_0056005
399 Ga0395905_0014221
400 Ga0395905_0269920
401 Ga0395901_0021028
402 Ga0400483_264788
403 Ga0466969_0043157
404 Ga0466965_0003022
405 Ga0466966_0004881
406 Ga0466961_0032877
407 Ga0466963_0259543
408 Ga0466964_0005333
409 Ga0453684_0041985
410 Ga0453684_0058447
411 Ga0466971_0002466
412 Ga0466968_0142691
413 Ga0466970_0030348
414 Ga0466957_0001848
415 Ga0466960_0073405
416 Ga0466959_0004099
417 Ga0451576_0010830
418 Ga0466958_0000968
419 Ga0495592_0000088
420 Ga0495638_0011523
421 Ga0495638_0042901
422 Ga0495639_0011083
423 Ga0495662_0131093
424 Ga0495583_0000558
425 Ga0495583_0042579
426 Ga0495606_0028516
427 Ga0495616_0003074
428 Ga0495618_0021631
429 Ga0495628_0000173
430 Ga0495628_0190167
431 Ga0495630_0003126
432 Ga0495648_0090403
433 Ga0495652_0125878
434 Ga0495640_0020211
435 Ga0495586_0001601
436 Ga0495645_0008469
437 Ga0495645_0030100
438 Ga0495625_0003521
439 Ga0495625_0053202
440 Ga0495599_0002914
441 Ga0495599_0007977
442 Ga0495623_0196777
443 Ga0495658_0203811
444 Ga0495649_0001365
445 Ga0495589_0005747
446 Ga0495581_0066319
447 Ga0501031_0003574
448 Ga0501032_0002189
449 Ga0501034_0157231
450 Ga0501036_0000759
451 Ga0501037_0000382
452 Ga0501038_0000641
453 Ga0501039_0016751
454 Ga0501042_0024902
455 Ga0501043_0019778
456 Ga0501046_0005932
457 Ga0501046_0122131
458 Ga0501047_0017377
459 Ga0501048_0003057
460 Ga0501068_0066326
461 Ga0501070_0050522
462 Ga0501072_0218414
463 Ga0501083_0190267
464 Ga0501035_0007018
465 Ga0501044_0012997
466 nmdc:mga0k408_65342_c1
467 nmdc:mga07m45_4315_c1
468 nmdc:mga09592_58904_c1
469 nmdc:mga08y16_176416_c1
470 Ga0495601_0446838
471 Ga0500635_0000225
472 Ga0500635_0007389
473 Ga0495619_0125860
474 Ga0500616_0000105
475 Ga0500636_0022512
476 Ga0501084_0432361
477 Ga0530510_0083599
478 2746087862
479 2746094344
480 8001523631

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07024

ImpE

ImpE protein

162

283

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4uqy-assembly1.cif.gz_A coevolution of the atpase clpv, the tssb-tssc sheath and the accessory hsie protein distinguishes two type vi secretion classes 0.9561 7 264
4uqy-assembly1.cif.gz_A coevolution of the atpase clpv, the tssb-tssc sheath and the accessory hsie protein distinguishes two type vi secretion classes 0.9452 7 264
4apo-assembly1.cif.gz_A aip tpr domain in complex with human tomm20 peptide 0.9253 14 79
7zub-assembly1.cif.gz_C cryo-em structure of the indirubin-bound hsp90-xap2-ahr complex 0.8949 14 85
4apo-assembly2.cif.gz_B aip tpr domain in complex with human tomm20 peptide 0.888 14 85
ID Description Score Start End Superfamily
af_Q8C1F5_371_446_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9425 17 64 1.25.40.10
4aifB00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9396 19 79 1.25.40.10
af_A0A1D6H8B1_477_541_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9296 17 64 1.25.40.10
4apoA00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9253 14 79 1.25.40.10
af_Q5FWY5_170_329_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9187 19 85 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A4Q2FHP4-F1-model_v4 Virulence protein SciE type 0.9896 77 213
AF-A0A328ZHA2-F1-model_v4 Type VI secretion system protein ImpE 0.9849 15 263
AF-A0A1Y3A1G5-F1-model_v4 Virulence protein SciE type 0.9825 15 266
AF-A0A2R7NPW0-F1-model_v4 Virulence protein SciE type 0.9818 10 190
AF-A0A5C7Q9D6-F1-model_v4 Virulence protein SciE type 0.9792 17 263

Map