F352313

General Info

Members Datasets Scaffolds Average Seq Length
239 184 212 392

Family's Representative Sequence

Representative Sequence 3300049580|Ga0501046_0039915|Ga0501046_0039915_48_1445
Length 454
Sequence LGDLNFEISEPRLLGQRRGFFIGLAQKTSSAGGRESNLSDGPSPGSGLPLGTSSTTIQKGFVGAMNEQDPRTISRPADGTSTVAVHAGEDRHKVGHAITDPIFCASTYTFADTASVIDFIEQKPGEKVVERKLAALEGSEAAVLFSSGMAAVSGLLLSKLNSGDEVIFFNECYHRTREFCSKHLSRFGVVTHQVPAGDYAAMEAAINKNTRLLVSESPTNPHLSVVDLERFAELGRKHKVETLIDATLGTPYNVRPIAAGIDYVLHSATKYLGGHNDLLAGVILGSTEKLEAVRNLRGITGAINSPHNIYLLERGLKTFELRMQRHNANGLAVAQFLHTHPRIEKVYYPGLPSHPYYGIAQRTMKGFGGLVTFLVKDADWKQTAAVVDAVRIPRIAPSLGGVESLIEQPLVMSYYEIPPADRQRYGIPDNMIRLSCGIENTDDLVADLKQALER

Samples

Sample ID Description Type Environment
1 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
2 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
3 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
4 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
5 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
6 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
7 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
8 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
9 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
10 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
11 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
12 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
13 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
14 2891562705 Microbispora tritici MT50 Isolate Unclassified
15 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
16 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
17 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
18 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
19 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
20 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
21 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
22 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
23 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
24 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
25 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
26 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
27 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
28 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
29 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
31 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
32 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
33 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
34 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
35 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
37 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
38 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
39 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
40 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
41 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
42 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
43 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
44 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
45 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
46 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
47 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
48 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
49 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
50 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
51 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
52 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
53 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
54 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
55 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
56 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
57 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
58 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
59 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
60 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
61 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
62 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
63 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
64 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
65 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
66 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
67 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
68 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
69 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
70 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
72 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
76 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
77 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
79 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
80 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
85 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
87 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
100 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
101 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
102 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
103 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
104 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
105 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
106 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
107 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
108 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
109 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
112 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
115 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
116 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
117 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
118 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
119 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
120 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
121 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
122 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
126 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
127 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
128 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
129 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
130 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
131 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
136 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
137 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
138 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
139 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
151 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
152 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
153 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
154 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
158 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
159 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
162 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
166 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
172 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
173 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
174 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
175 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
176 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
177 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
178 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
179 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
180 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
181 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
182 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified
183 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
184 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.7
Metatranscriptomes 0
Isolates 11.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.74
Nodule 0
Rhizoplane 0.84
Rhizosphere 68.2
Stem 0
Stem Tuber 0
Unclassified 14.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000358 3300001979 Bacteria 19557
2 JGI24739J22299_10000433 3300001989 Bacteria 14530
3 JGI25154J39366_1000007 3300002738 Bacteria 335932
4 JGI25158J39367_1007783 3300002739 Bacteria 1502
5 JGI25406J46586_10001726 3300003203 Bacteria 10273
6 JGI25153J46596_10001828 3300003215 Bacteria 12620
7 JGI25153J46596_10018062 3300003215 Bacteria 2753
8 rootH1_10141991 3300003316 Bacteria 3780
9 rootL2_10022865 3300003322 Bacteria 7745
10 rootH1_10046794 3300003323 Bacteria 11572
11 JGI25160J50197_1001383 3300003354 Bacteria 12214
12 JGI25407J50210_10003300 3300003373 Bacteria 3843
13 Ga0055535_1003112 3300003761 Bacteria 4990
14 Ga0055542_1009047 3300003762 Bacteria 1902
15 Ga0055528_1015931 3300003790 Bacteria 2686
16 Ga0055531_10000020 3300003794 Bacteria 170186
17 Ga0055543_1008711 3300004625 Bacteria 2229
18 Ga0065165_1000010 3300005262 Bacteria 323737
19 Ga0065165_1009228 3300005262 Bacteria 4460
20 Ga0065165_1011679 3300005262 Bacteria 3633
21 Ga0070687_100008726 3300005343 Bacteria 4305
22 Ga0070675_100049089 3300005354 Bacteria 3463
23 Ga0070709_10163934 3300005434 Bacteria 1548
24 Ga0070714_100003149 3300005435 Bacteria 12246
25 Ga0070711_100003266 3300005439 Bacteria 9427
26 Ga0070711_100015675 3300005439 Bacteria 4798
27 Ga0070711_100218409 3300005439 Bacteria 1480
28 Ga0070694_100033448 3300005444 Bacteria 3383
29 Ga0070681_10311268 3300005458 Bacteria 1484
30 Ga0070706_100155345 3300005467 Bacteria 2136
31 Ga0070707_100097538 3300005468 Bacteria 2847
32 Ga0070698_100087021 3300005471 Unclassified 3111
33 Ga0070697_100001966 3300005536 Bacteria 15723
34 Ga0070665_100001150 3300005548 Bacteria 32536
35 Ga0068852_100222974 3300005616 Bacteria 1794
36 Ga0068859_100122971 3300005617 Bacteria 2662
37 Ga0081455_10008985 3300005937 Bacteria 10319
38 Ga0081455_10015691 3300005937 Bacteria 7344
39 Ga0081455_10026714 3300005937 Bacteria 5301
40 Ga0081455_10041378 3300005937 Bacteria 4053
41 Ga0081538_10000014 3300005981 Bacteria 151008
42 Ga0081539_10001471 3300005985 Bacteria 39947
43 Ga0075368_10067669 3300006042 Unclassified 1438
44 Ga0070716_100004790 3300006173 Bacteria 6497
45 Ga0070716_100173399 3300006173 Unclassified 1409
46 Ga0075367_10037657 3300006178 Bacteria 2812
47 Ga0075367_10064248 3300006178 Bacteria 2195
48 Ga0075370_10141686 3300006353 Bacteria 1406
49 Ga0075428_100028771 3300006844 Bacteria 6150
50 Ga0075428_100053196 3300006844 Bacteria 4436
51 Ga0075428_100080780 3300006844 Bacteria 3549
52 Ga0075428_100211806 3300006844 Bacteria 2094
53 Ga0075430_100126729 3300006846 Bacteria 2128
54 Ga0075431_100010842 3300006847 Bacteria 9168
55 Ga0075433_10030652 3300006852 Bacteria 4590
56 Ga0075434_100082093 3300006871 Unclassified 3221
57 Ga0075434_100205229 3300006871 Bacteria 1991
58 Ga0075434_100243446 3300006871 Bacteria 1818
59 Ga0097620_100122969 3300006931 Bacteria 2662
60 Ga0075435_100003285 3300007076 Bacteria 10958
61 Ga0075435_100132518 3300007076 Bacteria 2086
62 Ga0111539_10020873 3300009094 Bacteria 8066
63 Ga0105245_10012271 3300009098 Bacteria 7455
64 Ga0105242_10040483 3300009176 Bacteria 3756
65 Ga0105239_10016636 3300010375 Bacteria 8130
66 Ga0157380_10039678 3300014326 Bacteria 3663
67 Ga0157380_10086485 3300014326 Bacteria 2576
68 Ga0182005_1000215 3300015265 Bacteria 38214
69 Ga0209436_107203 3300025208 Bacteria 2353
70 Ga0209258_102250 3300025242 Bacteria 5201
71 Ga0209646_1000002 3300025246 Bacteria 1425781
72 Ga0209026_1000545 3300025250 Bacteria 25918
73 Ga0209148_1000283 3300025254 Bacteria 77780
74 Ga0209673_1000082 3300025273 Bacteria 219716
75 Ga0209130_1004066 3300025284 Bacteria 5780
76 Ga0209564_1002231 3300025295 Bacteria 15987
77 Ga0209564_1029206 3300025295 Bacteria 1741
78 Ga0209758_1008654 3300025297 Bacteria 6530
79 Ga0209050_1000389 3300025298 Bacteria 82517
80 Ga0207426_1000341 3300025302 Bacteria 87735
81 Ga0207426_1000951 3300025302 Bacteria 28622
82 Ga0207426_1002430 3300025302 Bacteria 11906
83 Ga0209257_1000001 3300025304 Bacteria 2274655
84 Ga0209257_1003759 3300025304 Bacteria 12538
85 Ga0207710_10028361 3300025900 Bacteria 2430
86 Ga0207693_10014649 3300025915 Bacteria 6300
87 Ga0207662_10005022 3300025918 Bacteria 7005
88 Ga0207646_10073094 3300025922 Bacteria 3063
89 Ga0207646_10137130 3300025922 Bacteria 2203
90 Ga0207681_10120400 3300025923 Bacteria 1924
91 Ga0207659_10077285 3300025926 Bacteria 2450
92 Ga0207665_10000508 3300025939 Bacteria 26274
93 Ga0207648_10205071 3300026089 Bacteria 1749
94 Ga0209813_10054891 3300027866 Unclassified 1257
95 Ga0207428_10067674 3300027907 Bacteria 2811
96 Ga0268266_10000396 3300028379 Bacteria 66056
97 Ga0265319_1000054 3300028563 Bacteria 93849
98 Ga0265318_10000585 3300028577 Bacteria 25569
99 Ga0265318_10000596 3300028577 Bacteria 25260
100 Ga0307515_10098205 3300028794 Bacteria 3569
101 Ga0307512_10007277 3300030522 Bacteria 11009
102 Ga0265330_10000950 3300031235 Bacteria 17884
103 Ga0265332_10000740 3300031238 Bacteria 20292
104 Ga0265328_10012347 3300031239 Bacteria 3400
105 Ga0265328_10035915 3300031239 Bacteria 1832
106 Ga0265325_10000087 3300031241 Bacteria 64725
107 Ga0265329_10000348 3300031242 Bacteria 24348
108 Ga0265340_10013763 3300031247 Bacteria 4242
109 Ga0265340_10028494 3300031247 Bacteria 2808
110 Ga0265331_10000744 3300031250 Bacteria 27435
111 Ga0265316_10104087 3300031344 Bacteria 2154
112 Ga0307513_10108238 3300031456 Bacteria 2781
113 Ga0265313_10000009 3300031595 Bacteria 169607
114 Ga0265313_10003570 3300031595 Bacteria 12508
115 Ga0265314_10003563 3300031711 Bacteria 15022
116 Ga0265342_10000633 3300031712 Bacteria 36850
117 Ga0265342_10017859 3300031712 Bacteria 4605
118 Ga0307413_10071731 3300031824 Bacteria 2183
119 Ga0307410_10069491 3300031852 Bacteria 2436
120 Ga0326468_10003453 3300031889 Bacteria 1338
121 Ga0307406_10148560 3300031901 Bacteria 1669
122 Ga0307407_10070061 3300031903 Bacteria 2083
123 Ga0307409_100015996 3300031995 Bacteria 4947
124 Ga0307415_100023485 3300032126 Bacteria 3828
125 Ga0307415_100026781 3300032126 Bacteria 3643
126 Ga0316574_0068956 3300035398 Bacteria 2231
127 Ga0373937_0012749 3300036401 Bacteria 7399
128 Ga0373937_0053790 3300036401 Unclassified 3693
129 Ga0395905_0025257 3300037471 Bacteria 5603
130 Ga0400490_58982 3300038726 Bacteria 1681
131 Ga0436361_0896798 3300039447 Bacteria 2224
132 Ga0436363_0430709 3300039450 Unclassified 2722
133 Ga0451849_1526207 3300041505 Bacteria 1578
134 Ga0439431_0006330 3300041997 Bacteria 2616
135 Ga0466968_0001021 3300044735 Bacteria 9870
136 Ga0466970_0002358 3300044765 Bacteria 9127
137 Ga0451576_0000246 3300045051 Bacteria 132778
138 Ga0451576_0054864 3300045051 Bacteria 4171
139 Ga0466967_0164123 3300045976 Bacteria 2087
140 Ga0495580_0003298 3300046472 Bacteria 13795
141 Ga0495580_0004264 3300046472 Bacteria 12030
142 Ga0495580_0079428 3300046472 Bacteria 2288
143 Ga0495582_0029691 3300046473 Bacteria 3001
144 Ga0495633_0000090 3300046558 Bacteria 122693
145 Ga0495659_0027817 3300046664 Bacteria 1953
146 Ga0495604_0131057 3300047317 Bacteria 1802
147 Ga0495676_0052109 3300047321 Bacteria 3269
148 Ga0496109_0495924 3300048912 Bacteria 1153
149 Ga0496114_0070114 3300048917 Bacteria 2944
150 Ga0496121_0000020 3300048924 Bacteria 498732
151 Ga0496126_0194706 3300048929 Bacteria 1715
152 Ga0501032_0024281 3300049569 Bacteria 4187
153 Ga0501034_0016959 3300049571 Bacteria 7466
154 Ga0501034_0022961 3300049571 Bacteria 6357
155 Ga0501034_0026739 3300049571 Bacteria 5871
156 Ga0501034_0093191 3300049571 Bacteria 3008
157 Ga0501039_0155587 3300049575 Bacteria 1796
158 Ga0501043_0032479 3300049579 Bacteria 4104
159 Ga0501043_0090411 3300049579 Bacteria 2407
160 Ga0501046_0003668 3300049580 Bacteria 14067
161 Ga0501046_0039915 3300049580 Bacteria 3755
162 Ga0501047_0028221 3300049581 Bacteria 5409
163 Ga0501047_0064339 3300049581 Bacteria 3537
164 Ga0501047_0064616 3300049581 Bacteria 3529
165 Ga0501067_0064450 3300049583 Bacteria 2029
166 Ga0501067_0103557 3300049583 Bacteria 1581
167 Ga0501068_0000211 3300049584 Bacteria 28138
168 Ga0501069_0002882 3300049585 Bacteria 8826
169 Ga0501069_0009297 3300049585 Bacteria 5187
170 Ga0501070_0004492 3300049586 Bacteria 11977
171 Ga0501072_0000029 3300049588 Bacteria 134083
172 Ga0501073_0001307 3300049589 Bacteria 18313
173 Ga0501073_0012885 3300049589 Bacteria 6096
174 Ga0501074_0005144 3300049590 Bacteria 9401
175 Ga0501074_0030852 3300049590 Bacteria 3883
176 Ga0501074_0117872 3300049590 Bacteria 1899
177 Ga0501076_0008001 3300049592 Bacteria 7720
178 Ga0501077_0002552 3300049593 Bacteria 10915
179 Ga0501079_0003760 3300049741 Bacteria 11209
180 Ga0501079_0172417 3300049741 Bacteria 1687
181 Ga0501080_0072081 3300049742 Bacteria 3214
182 Ga0501080_0081860 3300049742 Bacteria 2998
183 Ga0501083_0002966 3300049744 Bacteria 11768
184 Ga0501083_0007791 3300049744 Bacteria 7588
185 Ga0501241_004064 3300049758 Bacteria 2752
186 Ga0501044_0116063 3300049823 Bacteria 2683
187 Ga0501045_0062302 3300049824 Bacteria 2737
188 nmdc:mga06z11_18880_c1 3300050494 Bacteria 3158
189 nmdc:mga04h51_28654_c1 3300050495 Unclassified 1738
190 nmdc:mga0n895_173873_c1 3300050512 Bacteria 2185
191 nmdc:mga0rr50_33321_c1 3300050513 Bacteria 3679
192 nmdc:mga0rr50_41841_c1 3300050513 Bacteria 3342
193 nmdc:mga08x19_102359_c1 3300050514 Bacteria 1902
194 nmdc:mga08x19_32822_c1 3300050514 Bacteria 3274
195 nmdc:mga0a205_17138_c1 3300050515 Bacteria 6785
196 nmdc:mga0a205_38233_c1 3300050515 Bacteria 4616
197 Ga0495595_0059672 3300053084 Bacteria 1784
198 Ga0500644_0000279 3300053088 Bacteria 28337
199 Ga0500569_000815 3300053109 Bacteria 5503
200 Ga0500559_0068243 3300053136 Bacteria 1597
201 Ga0500590_035334 3300053148 Bacteria 2587
202 Ga0500622_0000488 3300053156 Bacteria 37136
203 Ga0500633_0006823 3300053160 Bacteria 2830
204 Ga0501084_0000018 3300054114 Bacteria 147013
205 Ga0501084_0011852 3300054114 Bacteria 7217
206 Ga0501084_0056427 3300054114 Bacteria 3286
207 Ga0501084_0079745 3300054114 Bacteria 2744
208 Ga0500661_004100 3300055283 Bacteria 2725
209 Ga0501082_0002763 3300060353 Bacteria 15332
210 Ga0501082_0032489 3300060353 Bacteria 4501
211 Ga0501082_0239539 3300060353 Bacteria 1579
212 Ga0530510_0022491 3300061734 Bacteria 4491

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048912 Ga0496109_0495924 Ga0496109_0495924_42_995 314
2 3300006042 Ga0075368_10067669 Ga0075368_100676691 350
3 3300006844 Ga0075428_100080780 Ga0075428_1000807804 350
4 3300027866 Ga0209813_10054891 Ga0209813_100548911 350
5 3300050495 nmdc:mga04h51_28654_c1 nmdc:mga04h51_28654_c1_231_1331 350
6 3300031901 Ga0307406_10148560 Ga0307406_101485602 352
7 3300005937 Ga0081455_10015691 Ga0081455_100156911 353
8 3300031889 Ga0326468_10003453 Ga0326468_100034531 353
9 3300005536 Ga0070697_100001966 Ga0070697_10000196615 359
10 3300003323 rootH1_10046794 rootH1_100467947 362
11 3300049590 Ga0501074_0117872 Ga0501074_0117872_692_1867 362
12 iso_pu_bacteria 2884791551 2884798074 364
13 3300003373 JGI25407J50210_10003300 JGI25407J50210_100033003 365
14 3300005981 Ga0081538_10000014 Ga0081538_1000001465 365
15 3300025922 Ga0207646_10137130 Ga0207646_101371302 366
16 3300039447 Ga0436361_0896798 Ga0436361_0896798_189_1352 366
17 3300049579 Ga0501043_0090411 Ga0501043_0090411_878_2083 366
18 3300049580 Ga0501046_0039915 Ga0501046_0039915_48_1445 366
19 3300049586 Ga0501070_0004492 Ga0501070_0004492_3213_4418 366
20 3300049590 Ga0501074_0005144 Ga0501074_0005144_2296_3492 368
21 3300005343 Ga0070687_100008726 Ga0070687_1000087262 369
22 3300025918 Ga0207662_10005022 Ga0207662_100050226 369
23 3300003203 JGI25406J46586_10001726 JGI25406J46586_100017269 370
24 3300005548 Ga0070665_100001150 Ga0070665_10000115010 370
25 3300005985 Ga0081539_10001471 Ga0081539_1000147125 370
26 3300006844 Ga0075428_100053196 Ga0075428_1000531962 370
27 3300014326 Ga0157380_10039678 Ga0157380_100396782 370
28 3300028379 Ga0268266_10000396 Ga0268266_1000039618 370
29 3300028794 Ga0307515_10098205 Ga0307515_100982053 370
30 3300030522 Ga0307512_10007277 Ga0307512_100072773 370
31 3300048917 Ga0496114_0070114 Ga0496114_0070114_515_1723 370
32 3300049589 Ga0501073_0012885 Ga0501073_0012885_1155_2315 370
33 3300054114 Ga0501084_0056427 Ga0501084_0056427_200_1360 370
34 iso_pu_bacteria 8056207758 8056215208 370
35 3300006178 Ga0075367_10064248 Ga0075367_100642482 371
36 3300006353 Ga0075370_10141686 Ga0075370_101416861 371
37 3300031456 Ga0307513_10108238 Ga0307513_101082382 371
38 3300050514 nmdc:mga08x19_102359_c1 nmdc:mga08x19_102359_c1_83_1270 371
39 3300044735 Ga0466968_0001021 Ga0466968_0001021_7191_8363 372
40 3300044765 Ga0466970_0002358 Ga0466970_0002358_103_1275 372
41 3300050515 nmdc:mga0a205_38233_c1 nmdc:mga0a205_38233_c1_1678_2829 372
42 iso_pu_bacteria 2512564039 2512734289 372
43 3300028563 Ga0265319_1000054 Ga0265319_100005427 373
44 3300028577 Ga0265318_10000585 Ga0265318_1000058520 373
45 3300028577 Ga0265318_10000596 Ga0265318_1000059620 373
46 3300031235 Ga0265330_10000950 Ga0265330_1000095012 373
47 3300031238 Ga0265332_10000740 Ga0265332_1000074014 373
48 3300031239 Ga0265328_10012347 Ga0265328_100123472 373
49 3300031239 Ga0265328_10035915 Ga0265328_100359152 373
50 3300031241 Ga0265325_10000087 Ga0265325_1000008747 373
51 3300031242 Ga0265329_10000348 Ga0265329_1000034821 373
52 3300031247 Ga0265340_10013763 Ga0265340_100137633 373
53 3300031247 Ga0265340_10028494 Ga0265340_100284943 373
54 3300031250 Ga0265331_10000744 Ga0265331_1000074417 373
55 3300031344 Ga0265316_10104087 Ga0265316_101040872 373
56 3300031595 Ga0265313_10000009 Ga0265313_1000000945 373
57 3300031595 Ga0265313_10003570 Ga0265313_1000357011 373
58 3300031711 Ga0265314_10003563 Ga0265314_1000356312 373
59 3300031712 Ga0265342_10000633 Ga0265342_100006332 373
60 3300031712 Ga0265342_10017859 Ga0265342_100178594 373
61 3300038726 Ga0400490_58982 Ga0400490_58982_45_1208 373
62 3300047321 Ga0495676_0052109 Ga0495676_0052109_140_1300 373
63 3300049569 Ga0501032_0024281 Ga0501032_0024281_2116_3297 373
64 3300049579 Ga0501043_0032479 Ga0501043_0032479_640_1821 373
65 3300049581 Ga0501047_0064616 Ga0501047_0064616_938_2119 373
66 3300049583 Ga0501067_0103557 Ga0501067_0103557_328_1509 373
67 3300049584 Ga0501068_0000211 Ga0501068_0000211_11054_12235 373
68 3300049585 Ga0501069_0002882 Ga0501069_0002882_6394_7575 373
69 3300049588 Ga0501072_0000029 Ga0501072_0000029_34856_36037 373
70 3300049589 Ga0501073_0001307 Ga0501073_0001307_7487_8668 373
71 3300049590 Ga0501074_0030852 Ga0501074_0030852_604_1785 373
72 3300049592 Ga0501076_0008001 Ga0501076_0008001_1391_2572 373
73 3300049593 Ga0501077_0002552 Ga0501077_0002552_856_2037 373
74 3300049741 Ga0501079_0003760 Ga0501079_0003760_10003_11184 373
75 3300049742 Ga0501080_0072081 Ga0501080_0072081_178_1374 373
76 3300049742 Ga0501080_0081860 Ga0501080_0081860_474_1655 373
77 3300049744 Ga0501083_0007791 Ga0501083_0007791_1993_3174 373
78 3300054114 Ga0501084_0000018 Ga0501084_0000018_110980_112161 373
79 3300054114 Ga0501084_0079745 Ga0501084_0079745_1185_2381 373
80 3300060353 Ga0501082_0002763 Ga0501082_0002763_4932_6113 373
81 3300061734 Ga0530510_0022491 Ga0530510_0022491_2060_3241 373
82 3300027907 Ga0207428_10067674 Ga0207428_100676742 374
83 3300035398 Ga0316574_0068956 Ga0316574_0068956_134_1300 374
84 3300049741 Ga0501079_0172417 Ga0501079_0172417_16_1191 374
85 3300049824 Ga0501045_0062302 Ga0501045_0062302_1310_2509 374
86 3300060353 Ga0501082_0239539 Ga0501082_0239539_67_1242 374
87 3300006844 Ga0075428_100028771 Ga0075428_1000287716 375
88 3300006846 Ga0075430_100126729 Ga0075430_1001267292 375
89 iso_pu_bacteria 2675903060 2676488114 375
90 iso_pu_bacteria 2884693830 2884697286 376
91 iso_pu_bacteria 2895427314 2895430894 376
92 iso_pu_bacteria 2895442618 2895452794 376
93 iso_pu_bacteria 8055066027 8055069532 376
94 3300005354 Ga0070675_100049089 Ga0070675_1000490891 377
95 3300005467 Ga0070706_100155345 Ga0070706_1001553451 377
96 3300005617 Ga0068859_100122971 Ga0068859_1001229713 377
97 3300005937 Ga0081455_10026714 Ga0081455_100267143 377
98 3300006847 Ga0075431_100010842 Ga0075431_1000108423 377
99 3300006871 Ga0075434_100205229 Ga0075434_1002052292 377
100 3300006931 Ga0097620_100122969 Ga0097620_1001229693 377
101 3300007076 Ga0075435_100132518 Ga0075435_1001325182 377
102 3300009098 Ga0105245_10012271 Ga0105245_100122717 377
103 3300009176 Ga0105242_10040483 Ga0105242_100404833 377
104 3300014326 Ga0157380_10086485 Ga0157380_100864851 377
105 3300025900 Ga0207710_10028361 Ga0207710_100283612 377
106 3300025926 Ga0207659_10077285 Ga0207659_100772852 377
107 3300026089 Ga0207648_10205071 Ga0207648_102050712 377
108 3300031824 Ga0307413_10071731 Ga0307413_100717312 377
109 3300031852 Ga0307410_10069491 Ga0307410_100694912 377
110 3300031903 Ga0307407_10070061 Ga0307407_100700612 377
111 3300031995 Ga0307409_100015996 Ga0307409_1000159963 377
112 3300032126 Ga0307415_100023485 Ga0307415_1000234854 377
113 3300032126 Ga0307415_100026781 Ga0307415_1000267812 377
114 3300036401 Ga0373937_0012749 Ga0373937_0012749_2791_3963 377
115 3300036401 Ga0373937_0053790 Ga0373937_0053790_985_2157 377
116 3300037471 Ga0395905_0025257 Ga0395905_0025257_2963_4135 377
117 3300041505 Ga0451849_1526207 Ga0451849_1526207_416_1561 377
118 3300045051 Ga0451576_0000246 Ga0451576_0000246_67520_68704 377
119 3300045051 Ga0451576_0054864 Ga0451576_0054864_2859_4028 377
120 3300049571 Ga0501034_0022961 Ga0501034_0022961_2987_4228 377
121 3300049571 Ga0501034_0026739 Ga0501034_0026739_2037_3248 377
122 3300049571 Ga0501034_0093191 Ga0501034_0093191_1441_2667 377
123 3300049580 Ga0501046_0003668 Ga0501046_0003668_12239_13450 377
124 3300050512 nmdc:mga0n895_173873_c1 nmdc:mga0n895_173873_c1_210_1361 377
125 3300053084 Ga0495595_0059672 Ga0495595_0059672_582_1766 377
126 iso_pu_bacteria 2687453341 2688394282 377
127 iso_pu_bacteria 2856741275 2856742788 377
128 iso_pu_bacteria 2891395885 2891397723 377
129 iso_pu_bacteria 2891554331 2891554392 377
130 iso_pu_bacteria 2891562705 2891565785 377
131 3300005458 Ga0070681_10311268 Ga0070681_103112681 378
132 3300005468 Ga0070707_100097538 Ga0070707_1000975383 378
133 3300005471 Ga0070698_100087021 Ga0070698_1000870212 378
134 3300006852 Ga0075433_10030652 Ga0075433_100306523 378
135 3300006871 Ga0075434_100243446 Ga0075434_1002434462 378
136 3300007076 Ga0075435_100003285 Ga0075435_1000032859 378
137 3300009094 Ga0111539_10020873 Ga0111539_100208737 378
138 3300048929 Ga0496126_0194706 Ga0496126_0194706_359_1558 378
139 3300050513 nmdc:mga0rr50_33321_c1 nmdc:mga0rr50_33321_c1_2079_3266 378
140 3300050513 nmdc:mga0rr50_41841_c1 nmdc:mga0rr50_41841_c1_1678_2898 378
141 3300050514 nmdc:mga08x19_32822_c1 nmdc:mga08x19_32822_c1_309_1496 378
142 3300050515 nmdc:mga0a205_17138_c1 nmdc:mga0a205_17138_c1_3547_4734 378
143 3300005444 Ga0070694_100033448 Ga0070694_1000334485 379
144 3300005616 Ga0068852_100222974 Ga0068852_1002229742 379
145 3300006173 Ga0070716_100173399 Ga0070716_1001733991 379
146 3300006844 Ga0075428_100211806 Ga0075428_1002118062 379
147 3300006871 Ga0075434_100082093 Ga0075434_1000820934 379
148 3300049575 Ga0501039_0155587 Ga0501039_0155587_11_1243 379
149 3300049583 Ga0501067_0064450 Ga0501067_0064450_212_1363 379
150 3300049585 Ga0501069_0009297 Ga0501069_0009297_3449_4600 379
151 3300006178 Ga0075367_10037657 Ga0075367_100376572 380
152 3300046558 Ga0495633_0000090 Ga0495633_0000090_70779_71921 380
153 3300050494 nmdc:mga06z11_18880_c1 nmdc:mga06z11_18880_c1_1215_2450 380
154 3300053156 Ga0500622_0000488 Ga0500622_0000488_1845_2987 380
155 3300005937 Ga0081455_10008985 Ga0081455_100089857 381
156 3300005937 Ga0081455_10041378 Ga0081455_100413783 381
157 3300049581 Ga0501047_0028221 Ga0501047_0028221_1104_2303 381
158 3300049744 Ga0501083_0002966 Ga0501083_0002966_4870_6069 381
159 3300054114 Ga0501084_0011852 Ga0501084_0011852_1616_2815 381
160 3300060353 Ga0501082_0032489 Ga0501082_0032489_1138_2337 381
161 3300005435 Ga0070714_100003149 Ga0070714_1000031495 382
162 3300025922 Ga0207646_10073094 Ga0207646_100730943 382
163 3300045976 Ga0466967_0164123 Ga0466967_0164123_48_1310 382
164 3300046473 Ga0495582_0029691 Ga0495582_0029691_671_1873 382
165 3300047317 Ga0495604_0131057 Ga0495604_0131057_532_1734 382
166 3300005439 Ga0070711_100015675 Ga0070711_1000156752 383
167 3300005439 Ga0070711_100218409 Ga0070711_1002184091 383
168 3300006173 Ga0070716_100004790 Ga0070716_1000047903 383
169 3300025915 Ga0207693_10014649 Ga0207693_100146493 383
170 3300025939 Ga0207665_10000508 Ga0207665_100005083 383
171 3300039450 Ga0436363_0430709 Ga0436363_0430709_252_1460 383
172 3300046472 Ga0495580_0003298 Ga0495580_0003298_6164_7369 383
173 3300046472 Ga0495580_0004264 Ga0495580_0004264_2268_3473 383
174 3300046472 Ga0495580_0079428 Ga0495580_0079428_371_1576 383
175 3300046664 Ga0495659_0027817 Ga0495659_0027817_25_1230 383
176 3300005434 Ga0070709_10163934 Ga0070709_101639341 384
177 3300005439 Ga0070711_100003266 Ga0070711_10000326611 384
178 iso_pu_bacteria 2818991442 2819573759 388
179 iso_pu_bacteria 2818991460 2819680514 388
180 iso_pu_bacteria 2821136567 2821137093 388
181 iso_pu_bacteria 2840677318 2840677607 388
182 iso_pu_bacteria 2883068021 2883072987 388
183 iso_pu_bacteria 2896085136 2896085425 388
184 iso_pu_bacteria 2896109856 2896113611 388
185 iso_pu_bacteria 2904467357 2904468165 388
186 iso_pu_bacteria 2929177148 2929182808 388
187 iso_pu_bacteria 2929239360 2929241374 388
188 iso_pu_bacteria 2929921140 2929923395 388
189 iso_pu_bacteria 2945977869 2945978762 388
190 iso_pu_bacteria 2946013367 2946015371 388
191 iso_pu_bacteria 8003151029 8003152796 388
192 3300001979 JGI24740J21852_10000358 JGI24740J21852_100003582 392
193 3300001989 JGI24739J22299_10000433 JGI24739J22299_100004331 392
194 3300002738 JGI25154J39366_1000007 JGI25154J39366_100000759 392
195 3300002739 JGI25158J39367_1007783 JGI25158J39367_10077832 392
196 3300003215 JGI25153J46596_10001828 JGI25153J46596_100018288 392
197 3300003215 JGI25153J46596_10018062 JGI25153J46596_100180623 392
198 3300003316 rootH1_10141991 rootH1_101419912 392
199 3300003322 rootL2_10022865 rootL2_100228653 392
200 3300003354 JGI25160J50197_1001383 JGI25160J50197_100138311 392
201 3300003761 Ga0055535_1003112 Ga0055535_10031124 392
202 3300003762 Ga0055542_1009047 Ga0055542_10090472 392
203 3300003790 Ga0055528_1015931 Ga0055528_10159313 392
204 3300003794 Ga0055531_10000020 Ga0055531_1000002079 392
205 3300004625 Ga0055543_1008711 Ga0055543_10087112 392
206 3300005262 Ga0065165_1000010 Ga0065165_1000010217 392
207 3300005262 Ga0065165_1009228 Ga0065165_10092285 392
208 3300005262 Ga0065165_1011679 Ga0065165_10116792 392
209 3300010375 Ga0105239_10016636 Ga0105239_100166368 392
210 3300015265 Ga0182005_1000215 Ga0182005_100021518 392
211 3300025208 Ga0209436_107203 Ga0209436_1072032 392
212 3300025242 Ga0209258_102250 Ga0209258_1022504 392
213 3300025246 Ga0209646_1000002 Ga0209646_1000002665 392
214 3300025250 Ga0209026_1000545 Ga0209026_100054517 392
215 3300025254 Ga0209148_1000283 Ga0209148_100028369 392
216 3300025273 Ga0209673_1000082 Ga0209673_1000082190 392
217 3300025284 Ga0209130_1004066 Ga0209130_10040663 392
218 3300025295 Ga0209564_1002231 Ga0209564_10022316 392
219 3300025295 Ga0209564_1029206 Ga0209564_10292061 392
220 3300025297 Ga0209758_1008654 Ga0209758_10086545 392
221 3300025298 Ga0209050_1000389 Ga0209050_100038934 392
222 3300025302 Ga0207426_1000341 Ga0207426_100034129 392
223 3300025302 Ga0207426_1000951 Ga0207426_10009516 392
224 3300025302 Ga0207426_1002430 Ga0207426_10024307 392
225 3300025304 Ga0209257_1000001 Ga0209257_10000011305 392
226 3300025304 Ga0209257_1003759 Ga0209257_10037593 392
227 3300025923 Ga0207681_10120400 Ga0207681_101204002 392
228 3300041997 Ga0439431_0006330 Ga0439431_0006330_1298_2476 392
229 3300048924 Ga0496121_0000020 Ga0496121_0000020_340853_342031 392
230 3300049571 Ga0501034_0016959 Ga0501034_0016959_696_1874 392
231 3300049581 Ga0501047_0064339 Ga0501047_0064339_749_1927 392
232 3300049758 Ga0501241_004064 Ga0501241_004064_1518_2696 392
233 3300049823 Ga0501044_0116063 Ga0501044_0116063_669_1847 392
234 3300053088 Ga0500644_0000279 Ga0500644_0000279_10393_11571 392
235 3300053109 Ga0500569_000815 Ga0500569_000815_3325_4503 392
236 3300053136 Ga0500559_0068243 Ga0500559_0068243_15_1193 392
237 3300053148 Ga0500590_035334 Ga0500590_035334_466_1644 392
238 3300053160 Ga0500633_0006823 Ga0500633_0006823_185_1363 392
239 3300055283 Ga0500661_004100 Ga0500661_004100_400_1578 392

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

81

453

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4l0o-assembly2.cif.gz_M-2 structure determination of cystathionine gamma-synthase from helicobacter pylori 0.9769 1 379
4l0o-assembly3.cif.gz_A structure determination of cystathionine gamma-synthase from helicobacter pylori 0.9753 1 379
8biv-assembly1.cif.gz_A cystathionine gamma-lyase n360s mutant from toxoplasma gondii 0.9737 4 379
6nba-assembly1.cif.gz_D crystal structure of human cystathionine gamma lyase with s-3-carboxpropyl-l-cysteine 0.9728 4 380
6k1l-assembly1.cif.gz_B e53a mutant of a putative cystathionine gamma-lyase 0.9727 4 377
ID Description Score Start End Superfamily
3e6gD01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9857 47 240 3.40.640.10
af_A0A0P0VYR6_1_109_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9746 135 243 3.40.640.10
af_P9WGB7_1_258_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9736 4 243 3.40.640.10
af_Q2G119_4_242_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9729 6 243 3.40.640.10
3ndnB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9707 246 377 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A544VQ81-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9901 55 190 GO:0003962
GO:0004123
GO:0005737
GO:0008483
GO:0009086
GO:0019343
GO:0019346
GO:0030170
AF-A0A529ZDV4-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9897 81 191 GO:0003962
GO:0004123
GO:0005737
GO:0008483
GO:0019343
GO:0019346
GO:0030170
AF-A0A067DBL8-F1-model_v4 cysteine-S-conjugate beta-lyase (EC 4.4.1.13) 0.9859 74 212 GO:0016829
GO:0019346
GO:0030170
AF-A0A5J4TM11-F1-model_v4 Methionine gamma-lyase 0.9853 47 229 GO:0005737
GO:0016846
GO:0019346
GO:0030170
AF-C0B9Q4-F1-model_v4 Cys/Met metabolism PLP-dependent enzyme 0.9846 74 377 GO:0005737
GO:0016846
GO:0019346
GO:0030170

Feature Viewer

pLDDT pTM Quality
90.79 0.9 High
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Predicted Structure (AlphaFold2)

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