F352075

General Info

Members Datasets Scaffolds Average Seq Length
239 170 478 148

Family's Representative Sequence

Representative Sequence 3300031733|Ga0316577_10026465|Ga0316577_100264652
Length 165
Sequence MKRQQSTIPDSHYRILVVHGPNLNLLGSREPEVYGRLTLAEIDRRLDVLATELGVTLQTLQSNHEGALIDAIHEAASWADGLLINPGAYTHYSYALHDAIAGVDVPAVEVHLSNIYARESFRRVSVITPVCVGQICGFGWRSYVLGLRALLGYLSDLELDEEQPR

Samples

Sample ID Description Type Environment
1 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
4 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
79 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
80 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
81 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
82 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
85 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
86 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
87 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
94 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
95 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
96 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
97 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
98 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
99 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
107 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
108 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
109 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
110 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
111 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
112 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
113 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
121 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
122 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
123 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
124 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
125 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
126 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
127 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
131 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
132 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
135 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
141 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
147 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
148 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
149 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
150 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
151 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
152 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
156 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
157 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
160 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
161 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
164 2643221546 Microbacterium sp. Root53 Isolate Unclassified
165 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
166 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
167 2919395869 Microbacterium resistens 2980 Isolate Unclassified
168 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
169 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
170 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.07
Metatranscriptomes 0
Isolates 2.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.95
Nodule 0
Rhizoplane 9.21
Rhizosphere 78.24
Stem 0
Stem Tuber 0
Unclassified 2.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316577_10026465 3300031733 Bacteria 3231
2 JGI25155J39150_1000090 3300002704 Bacteria 51836
3 JGI25158J39367_1020857 3300002739 Bacteria 798
4 Ga0055534_1017401 3300003784 Bacteria 1272
5 Ga0065715_10138907 3300005293 Bacteria 1884
6 Ga0070670_100509618 3300005331 Bacteria 1071
7 Ga0070677_10052678 3300005333 Bacteria 1652
8 Ga0070682_100339001 3300005337 Bacteria 1117
9 Ga0070689_100125313 3300005340 Bacteria 2055
10 Ga0070661_101045050 3300005344 Unclassified 679
11 Ga0070692_11001459 3300005345 Bacteria 584
12 Ga0070675_100054462 3300005354 Bacteria 3291
13 Ga0070671_100132209 3300005355 Bacteria 2102
14 Ga0070673_100071836 3300005364 Bacteria 2782
15 Ga0070688_100080677 3300005365 Bacteria 2105
16 Ga0070703_10195243 3300005406 Bacteria 791
17 Ga0070705_100057414 3300005440 Bacteria 2296
18 Ga0070700_100429425 3300005441 Bacteria 1000
19 Ga0070678_100024804 3300005456 Bacteria 4021
20 Ga0070662_100107994 3300005457 Bacteria 2116
21 Ga0070662_101990246 3300005457 Bacteria 502
22 Ga0068853_102101279 3300005539 Bacteria 548
23 Ga0070672_100115324 3300005543 Bacteria 2193
24 Ga0070695_100118435 3300005545 Bacteria 1808
25 Ga0070696_100100324 3300005546 Bacteria 2074
26 Ga0070665_100153346 3300005548 Bacteria 2306
27 Ga0070704_100007422 3300005549 Bacteria 6530
28 Ga0068856_100306781 3300005614 Bacteria 1605
29 Ga0068859_100022858 3300005617 Bacteria 6269
30 Ga0068859_100073394 3300005617 Bacteria 3460
31 Ga0068866_10878018 3300005718 Bacteria 629
32 Ga0068863_101369916 3300005841 Bacteria 715
33 Ga0068858_100839312 3300005842 Bacteria 897
34 Ga0068860_100139290 3300005843 Bacteria 2331
35 Ga0068860_100454177 3300005843 Bacteria 1274
36 Ga0068862_100122929 3300005844 Bacteria 2289
37 Ga0068862_100132643 3300005844 Bacteria 2205
38 Ga0068862_100389754 3300005844 Bacteria 1301
39 Ga0081455_10023845 3300005937 Bacteria 5684
40 Ga0081538_10213028 3300005981 Bacteria 776
41 Ga0081539_10014382 3300005985 Bacteria 5858
42 Ga0081539_10074438 3300005985 Bacteria 1808
43 Ga0075368_10535876 3300006042 Bacteria 525
44 Ga0075363_100017956 3300006048 Bacteria 3517
45 Ga0075367_10816759 3300006178 Bacteria 594
46 Ga0075369_10042885 3300006186 Bacteria 1940
47 Ga0075369_10102679 3300006186 Bacteria 1284
48 Ga0075369_10157773 3300006186 Bacteria 1039
49 Ga0097621_100447342 3300006237 Bacteria 1163
50 Ga0068871_100160247 3300006358 Bacteria 1924
51 Ga0075428_100723297 3300006844 Bacteria 1060
52 Ga0075431_100222497 3300006847 Bacteria 1925
53 Ga0075434_100033360 3300006871 Bacteria 5080
54 Ga0075434_100205860 3300006871 Bacteria 1988
55 Ga0075429_100188894 3300006880 Bacteria 1805
56 Ga0068865_100194254 3300006881 Bacteria 1572
57 Ga0097620_100022857 3300006931 Bacteria 6269
58 Ga0097620_100073394 3300006931 Bacteria 3460
59 Ga0075435_100082034 3300007076 Bacteria 2650
60 Ga0075435_100413423 3300007076 Unclassified 1161
61 Ga0114129_10027521 3300009147 Bacteria 8049
62 Ga0114129_10341263 3300009147 Bacteria 1987
63 Ga0105241_11089451 3300009174 Bacteria 752
64 Ga0105248_10155075 3300009177 Bacteria 2584
65 Ga0105239_10050482 3300010375 Bacteria 4562
66 Ga0163162_10807382 3300013306 Bacteria 1055
67 Ga0163162_10872851 3300013306 Unclassified 1014
68 Ga0163162_11060592 3300013306 Bacteria 917
69 Ga0157380_10345945 3300014326 Bacteria 1389
70 Ga0157380_10651173 3300014326 Bacteria 1051
71 Ga0157379_11360653 3300014968 Bacteria 687
72 Ga0207671_10844923 3300025914 Bacteria 725
73 Ga0207650_11042067 3300025925 Bacteria 696
74 Ga0207670_10079883 3300025936 Bacteria 2285
75 Ga0207704_10272094 3300025938 Bacteria 1283
76 Ga0207691_10038684 3300025940 Bacteria 4415
77 Ga0207711_10348256 3300025941 Bacteria 1371
78 Ga0207679_10067736 3300025945 Bacteria 2679
79 Ga0207651_10112587 3300025960 Bacteria 2046
80 Ga0207640_11650601 3300025981 Unclassified 578
81 Ga0207658_11754627 3300025986 Bacteria 567
82 Ga0207639_11731602 3300026041 Bacteria 585
83 Ga0207708_11396983 3300026075 Bacteria 614
84 Ga0207648_10735493 3300026089 Bacteria 916
85 Ga0207675_100233542 3300026118 Bacteria 1775
86 Ga0207683_10022667 3300026121 Bacteria 5392
87 Ga0209813_10450641 3300027866 Bacteria 526
88 Ga0268266_10114109 3300028379 Bacteria 2397
89 Ga0268265_10104364 3300028380 Bacteria 2297
90 Ga0268264_10656409 3300028381 Bacteria 1038
91 Ga0265334_10006695 3300028573 Bacteria 4951
92 Ga0265338_10100640 3300028800 Bacteria 2356
93 Ga0265338_10131715 3300028800 Bacteria 1973
94 Ga0265338_10455990 3300028800 Bacteria 905
95 Ga0265320_10109758 3300031240 Bacteria 1264
96 Ga0307408_100257779 3300031548 Bacteria 1442
97 Ga0316579_10110393 3300031691 Bacteria 1320
98 Ga0316579_10458734 3300031691 Bacteria 616
99 Ga0316576_10009694 3300031727 Bacteria 6230
100 Ga0316578_10130947 3300031728 Bacteria 1509
101 Ga0316577_10002592 3300031733 Bacteria 8980
102 Ga0316577_10003905 3300031733 Bacteria 7607
103 Ga0316577_10037999 3300031733 Unclassified 2692
104 Ga0316577_10225470 3300031733 Bacteria 1060
105 Ga0316577_10591014 3300031733 Bacteria 631
106 Ga0307413_10045393 3300031824 Bacteria 2604
107 Ga0307413_10161681 3300031824 Bacteria 1574
108 Ga0307413_10301174 3300031824 Bacteria 1216
109 Ga0307410_10005322 3300031852 Bacteria 6795
110 Ga0307410_10092914 3300031852 Bacteria 2146
111 Ga0307406_10029124 3300031901 Bacteria 3342
112 Ga0307406_10077348 3300031901 Bacteria 2201
113 Ga0307407_10013238 3300031903 Bacteria 3996
114 Ga0307412_10798196 3300031911 Bacteria 819
115 Ga0307409_100284313 3300031995 Bacteria 1531
116 Ga0307416_100101388 3300032002 Bacteria 2507
117 Ga0307414_10078773 3300032004 Bacteria 2403
118 Ga0307414_10095186 3300032004 Bacteria 2225
119 Ga0307414_10488684 3300032004 Bacteria 1087
120 Ga0307414_11007802 3300032004 Bacteria 767
121 Ga0307411_10117559 3300032005 Bacteria 1916
122 Ga0307411_10201026 3300032005 Bacteria 1530
123 Ga0307415_100155570 3300032126 Bacteria 1765
124 Ga0307415_100591844 3300032126 Bacteria 986
125 Ga0316585_10180092 3300032137 Bacteria 698
126 Ga0316585_10227532 3300032137 Bacteria 617
127 Ga0373959_0049845 3300034820 Bacteria 901
128 Ga0373932_0084275 3300035112 Bacteria 1009
129 Ga0316574_0258178 3300035398 Bacteria 1113
130 Ga0316574_0534373 3300035398 Bacteria 729
131 Ga0373931_0014729 3300035691 Bacteria 3828
132 Ga0373931_0096540 3300035691 Bacteria 1656
133 Ga0316582_0005453 3300036647 Bacteria 6555
134 Ga0316582_0092680 3300036647 Bacteria 1991
135 Ga0316582_0277468 3300036647 Bacteria 1150
136 Ga0316582_0836648 3300036647 Bacteria 630
137 Ga0316584_0002858 3300036712 Bacteria 11069
138 Ga0316584_0008069 3300036712 Bacteria 7233
139 Ga0316584_0011346 3300036712 Bacteria 6259
140 Ga0316584_0031239 3300036712 Bacteria 3938
141 Ga0316584_0075373 3300036712 Bacteria 2528
142 Ga0316584_0636413 3300036712 Bacteria 736
143 Ga0395899_0045135 3300037312 Bacteria 3283
144 Ga0395899_0051960 3300037312 Bacteria 3040
145 Ga0395899_0872678 3300037312 Bacteria 551
146 Ga0395900_0006584 3300037418 Bacteria 12089
147 Ga0395900_0248009 3300037418 Bacteria 1783
148 Ga0395898_0109938 3300037466 Bacteria 2642
149 Ga0395898_0481624 3300037466 Bacteria 1180
150 Ga0395898_1230530 3300037466 Bacteria 679
151 Ga0395905_0002713 3300037471 Bacteria 19400
152 Ga0395905_0003236 3300037471 Bacteria 17514
153 Ga0395905_0238318 3300037471 Bacteria 1700
154 Ga0395905_0456865 3300037471 Bacteria 1175
155 Ga0395905_0617330 3300037471 Bacteria 986
156 Ga0316581_0001288 3300037588 Bacteria 5569
157 Ga0316581_0003360 3300037588 Bacteria 3977
158 Ga0316581_0018481 3300037588 Bacteria 2025
159 Ga0395901_0256706 3300038443 Bacteria 1820
160 Ga0400483_088220 3300039062 Bacteria 1138
161 Ga0400483_220760 3300039062 Bacteria 2232
162 Ga0400489_52062 3300039093 Bacteria 20156
163 Ga0439461_0000218 3300041410 Bacteria 8181
164 Ga0439466_0003748 3300041411 Bacteria 5869
165 Ga0439465_0127076 3300041413 Bacteria 897
166 Ga0451789_0346618 3300041443 Bacteria 1718
167 Ga0439431_0002307 3300041997 Bacteria 4213
168 Ga0439434_0001415 3300042435 Bacteria 6920
169 Ga0451577_0001954 3300042876 Bacteria 25998
170 Ga0451577_0051371 3300042876 Bacteria 3680
171 Ga0453683_0004756 3300044673 Bacteria 9569
172 Ga0453684_0000192 3300044712 Bacteria 266757
173 Ga0453684_0064146 3300044712 Bacteria 4694
174 Ga0466970_0579822 3300044765 Bacteria 650
175 Ga0451576_0186240 3300045051 Bacteria 2168
176 Ga0451576_0289980 3300045051 Bacteria 1711
177 Ga0466958_0235675 3300045836 Bacteria 1169
178 Ga0495662_0452863 3300046476 Bacteria 630
179 Ga0495620_0353987 3300046515 Bacteria 557
180 Ga0495635_0214143 3300046663 Bacteria 1304
181 Ga0495658_0023077 3300046683 Bacteria 3300
182 Ga0496100_0137860 3300048903 Bacteria 1726
183 Ga0496101_0168263 3300048904 Bacteria 1683
184 Ga0496101_0721538 3300048904 Bacteria 787
185 Ga0496102_0007965 3300048905 Bacteria 9055
186 Ga0496102_0077805 3300048905 Bacteria 3053
187 Ga0496103_0016433 3300048906 Bacteria 4417
188 Ga0496104_0005491 3300048907 Bacteria 11106
189 Ga0496105_0019778 3300048908 Bacteria 5433
190 Ga0496106_0035809 3300048909 Bacteria 3711
191 Ga0496107_0048089 3300048910 Bacteria 3072
192 Ga0496107_0662787 3300048910 Unclassified 769
193 Ga0496108_0014312 3300048911 Bacteria 6475
194 Ga0496109_0000241 3300048912 Bacteria 53091
195 Ga0496110_0000557 3300048913 Bacteria 25480
196 Ga0496110_0032864 3300048913 Bacteria 4485
197 Ga0496111_0076766 3300048914 Bacteria 2435
198 Ga0496112_0011768 3300048915 Bacteria 8012
199 Ga0496112_0280413 3300048915 Bacteria 1614
200 Ga0496113_0002362 3300048916 Bacteria 10932
201 Ga0496114_0619510 3300048917 Bacteria 953
202 Ga0496115_0102183 3300048918 Bacteria 2351
203 Ga0496120_0038695 3300048923 Bacteria 2820
204 Ga0496122_0013176 3300048925 Bacteria 8123
205 Ga0496126_0018543 3300048929 Bacteria 6891
206 Ga0501032_1069921 3300049569 Bacteria 506
207 Ga0501034_0001358 3300049571 Bacteria 33063
208 Ga0501034_0003477 3300049571 Bacteria 17905
209 Ga0501034_1023958 3300049571 Bacteria 709
210 Ga0501040_1291522 3300049576 Bacteria 530
211 Ga0501067_0075964 3300049583 Bacteria 1861
212 Ga0501068_0131703 3300049584 Bacteria 1564
213 Ga0501079_0679345 3300049741 Bacteria 811
214 nmdc:mga03n38_26166_c1 3300050490 Bacteria 2406
215 nmdc:mga00v17_168456_c1 3300050491 Bacteria 1412
216 nmdc:mga00v17_605148_c1 3300050491 Bacteria 706
217 nmdc:mga04h51_490004_c1 3300050495 Bacteria 524
218 nmdc:mga07m45_28812_c1 3300050496 Bacteria 3066
219 nmdc:mga05p37_214518_c1 3300050507 Bacteria 2325
220 nmdc:mga05p37_962390_c1 3300050507 Bacteria 912
221 nmdc:mga09592_184653_c1 3300050508 Bacteria 1804
222 nmdc:mga06r32_369543_c1 3300050510 Bacteria 1417
223 nmdc:mga0n895_53559_c1 3300050512 Bacteria 3965
224 nmdc:mga0rr50_91158_c1 3300050513 Bacteria 2373
225 nmdc:mga0a205_2427_c1 3300050515 Bacteria 16432
226 nmdc:mga0sz30_18510_c2 3300050516 Bacteria 2118
227 nmdc:mga0sz30_347958_c1 3300050516 Bacteria 662
228 nmdc:mga0sz30_85874_c1 3300050516 Bacteria 1365
229 Ga0500635_0012218 3300053080 Bacteria 2460
230 Ga0500643_002534 3300053087 Bacteria 9341
231 Ga0501084_0119214 3300054114 Bacteria 2218
232 Ga0501082_0842028 3300060353 Bacteria 802
233 2643752356 2643221546 Bacteria 2910897
234 2644635339 2643221715 Bacteria 6671032
235 2902813220 2902810491 Bacteria 6794147
236 2919399047 2919395869 Bacteria 3704152
237 2945971735 2945968032 Bacteria 4111363
238 2946033818 2946033335 Bacteria 3835514
239 8055036727 8055034563 Bacteria 3562128
240 Ga0316577_10026465
241 JGI25155J39150_1000090
242 JGI25158J39367_1020857
243 Ga0055534_1017401
244 Ga0065715_10138907
245 Ga0070670_100509618
246 Ga0070677_10052678
247 Ga0070682_100339001
248 Ga0070689_100125313
249 Ga0070661_101045050
250 Ga0070692_11001459
251 Ga0070675_100054462
252 Ga0070671_100132209
253 Ga0070673_100071836
254 Ga0070688_100080677
255 Ga0070703_10195243
256 Ga0070705_100057414
257 Ga0070700_100429425
258 Ga0070678_100024804
259 Ga0070662_100107994
260 Ga0070662_101990246
261 Ga0068853_102101279
262 Ga0070672_100115324
263 Ga0070695_100118435
264 Ga0070696_100100324
265 Ga0070665_100153346
266 Ga0070704_100007422
267 Ga0068856_100306781
268 Ga0068859_100022858
269 Ga0068859_100073394
270 Ga0068866_10878018
271 Ga0068863_101369916
272 Ga0068858_100839312
273 Ga0068860_100139290
274 Ga0068860_100454177
275 Ga0068862_100122929
276 Ga0068862_100132643
277 Ga0068862_100389754
278 Ga0081455_10023845
279 Ga0081538_10213028
280 Ga0081539_10014382
281 Ga0081539_10074438
282 Ga0075368_10535876
283 Ga0075363_100017956
284 Ga0075367_10816759
285 Ga0075369_10042885
286 Ga0075369_10102679
287 Ga0075369_10157773
288 Ga0097621_100447342
289 Ga0068871_100160247
290 Ga0075428_100723297
291 Ga0075431_100222497
292 Ga0075434_100033360
293 Ga0075434_100205860
294 Ga0075429_100188894
295 Ga0068865_100194254
296 Ga0097620_100022857
297 Ga0097620_100073394
298 Ga0075435_100082034
299 Ga0075435_100413423
300 Ga0114129_10027521
301 Ga0114129_10341263
302 Ga0105241_11089451
303 Ga0105248_10155075
304 Ga0105239_10050482
305 Ga0163162_10807382
306 Ga0163162_10872851
307 Ga0163162_11060592
308 Ga0157380_10345945
309 Ga0157380_10651173
310 Ga0157379_11360653
311 Ga0207671_10844923
312 Ga0207650_11042067
313 Ga0207670_10079883
314 Ga0207704_10272094
315 Ga0207691_10038684
316 Ga0207711_10348256
317 Ga0207679_10067736
318 Ga0207651_10112587
319 Ga0207640_11650601
320 Ga0207658_11754627
321 Ga0207639_11731602
322 Ga0207708_11396983
323 Ga0207648_10735493
324 Ga0207675_100233542
325 Ga0207683_10022667
326 Ga0209813_10450641
327 Ga0268266_10114109
328 Ga0268265_10104364
329 Ga0268264_10656409
330 Ga0265334_10006695
331 Ga0265338_10100640
332 Ga0265338_10131715
333 Ga0265338_10455990
334 Ga0265320_10109758
335 Ga0307408_100257779
336 Ga0316579_10110393
337 Ga0316579_10458734
338 Ga0316576_10009694
339 Ga0316578_10130947
340 Ga0316577_10002592
341 Ga0316577_10003905
342 Ga0316577_10037999
343 Ga0316577_10225470
344 Ga0316577_10591014
345 Ga0307413_10045393
346 Ga0307413_10161681
347 Ga0307413_10301174
348 Ga0307410_10005322
349 Ga0307410_10092914
350 Ga0307406_10029124
351 Ga0307406_10077348
352 Ga0307407_10013238
353 Ga0307412_10798196
354 Ga0307409_100284313
355 Ga0307416_100101388
356 Ga0307414_10078773
357 Ga0307414_10095186
358 Ga0307414_10488684
359 Ga0307414_11007802
360 Ga0307411_10117559
361 Ga0307411_10201026
362 Ga0307415_100155570
363 Ga0307415_100591844
364 Ga0316585_10180092
365 Ga0316585_10227532
366 Ga0373959_0049845
367 Ga0373932_0084275
368 Ga0316574_0258178
369 Ga0316574_0534373
370 Ga0373931_0014729
371 Ga0373931_0096540
372 Ga0316582_0005453
373 Ga0316582_0092680
374 Ga0316582_0277468
375 Ga0316582_0836648
376 Ga0316584_0002858
377 Ga0316584_0008069
378 Ga0316584_0011346
379 Ga0316584_0031239
380 Ga0316584_0075373
381 Ga0316584_0636413
382 Ga0395899_0045135
383 Ga0395899_0051960
384 Ga0395899_0872678
385 Ga0395900_0006584
386 Ga0395900_0248009
387 Ga0395898_0109938
388 Ga0395898_0481624
389 Ga0395898_1230530
390 Ga0395905_0002713
391 Ga0395905_0003236
392 Ga0395905_0238318
393 Ga0395905_0456865
394 Ga0395905_0617330
395 Ga0316581_0001288
396 Ga0316581_0003360
397 Ga0316581_0018481
398 Ga0395901_0256706
399 Ga0400483_088220
400 Ga0400483_220760
401 Ga0400489_52062
402 Ga0439461_0000218
403 Ga0439466_0003748
404 Ga0439465_0127076
405 Ga0451789_0346618
406 Ga0439431_0002307
407 Ga0439434_0001415
408 Ga0451577_0001954
409 Ga0451577_0051371
410 Ga0453683_0004756
411 Ga0453684_0000192
412 Ga0453684_0064146
413 Ga0466970_0579822
414 Ga0451576_0186240
415 Ga0451576_0289980
416 Ga0466958_0235675
417 Ga0495662_0452863
418 Ga0495620_0353987
419 Ga0495635_0214143
420 Ga0495658_0023077
421 Ga0496100_0137860
422 Ga0496101_0168263
423 Ga0496101_0721538
424 Ga0496102_0007965
425 Ga0496102_0077805
426 Ga0496103_0016433
427 Ga0496104_0005491
428 Ga0496105_0019778
429 Ga0496106_0035809
430 Ga0496107_0048089
431 Ga0496107_0662787
432 Ga0496108_0014312
433 Ga0496109_0000241
434 Ga0496110_0000557
435 Ga0496110_0032864
436 Ga0496111_0076766
437 Ga0496112_0011768
438 Ga0496112_0280413
439 Ga0496113_0002362
440 Ga0496114_0619510
441 Ga0496115_0102183
442 Ga0496120_0038695
443 Ga0496122_0013176
444 Ga0496126_0018543
445 Ga0501032_1069921
446 Ga0501034_0001358
447 Ga0501034_0003477
448 Ga0501034_1023958
449 Ga0501040_1291522
450 Ga0501067_0075964
451 Ga0501068_0131703
452 Ga0501079_0679345
453 nmdc:mga03n38_26166_c1
454 nmdc:mga00v17_168456_c1
455 nmdc:mga00v17_605148_c1
456 nmdc:mga04h51_490004_c1
457 nmdc:mga07m45_28812_c1
458 nmdc:mga05p37_214518_c1
459 nmdc:mga05p37_962390_c1
460 nmdc:mga09592_184653_c1
461 nmdc:mga06r32_369543_c1
462 nmdc:mga0n895_53559_c1
463 nmdc:mga0rr50_91158_c1
464 nmdc:mga0a205_2427_c1
465 nmdc:mga0sz30_18510_c2
466 nmdc:mga0sz30_347958_c1
467 nmdc:mga0sz30_85874_c1
468 Ga0500635_0012218
469 Ga0500643_002534
470 Ga0501084_0119214
471 Ga0501082_0842028
472 2643752356
473 2644635339
474 2902813220
475 2919399047
476 2945971735
477 2946033818
478 8055036727

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01220

DHquinase_II

Dehydroquinase class II

14

151

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
8idu-assembly1.cif.gz_A crystal structure of substrate bound-form dehydroquinate dehydratase from corynebacterium glutamicum 0.974 1 148
1gtz-assembly1.cif.gz_C structure of streptomyces coelicolor type ii dehydroquinase r23a mutant in complex with dehydroshikimate 0.9702 2 149
6sme-assembly1.cif.gz_B the crystal structure of type ii dehydroquinase from propionibacterium acnes 0.9675 1 146
6hs9-assembly1.cif.gz_A the crystal structure of type ii dehydroquinase from butyrivibrio crossotus dsm 2876 0.9658 2 144
2y71-assembly1.cif.gz_A structure of mycobacterium tuberculosis type ii dehydroquinase complexed with (1r,4s,5r)-1,4,5-trihydroxy-3-((5-methylbenzo(b) thiophen-2-yl)methoxy)cyclohex-2-enecarboxylate 0.9649 3 146
ID Description Score Start End Superfamily
1d0iH00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9636 2 149 3.40.50.9100
4kiuM00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9591 3 146 3.40.50.9100
1gqoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9541 3 146 3.40.50.9100
4kiuM00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9384 3 146 3.40.50.9100
2c57B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.936 1 147 3.40.50.9100
ID Description Score Start End GO Terms
AF-A0A1S8FVY9-F1-model_v4 deleted 1.002 1 148
AF-A1W6C8-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9973 1 146 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631
AF-A0A1I5XDD3-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9971 1 148 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0016020
GO:0019631
AF-A0A016XGU2-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9967 1 148 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631
AF-A0A520EDY1-F1-model_v4 3-dehydroquinate dehydratase (EC 4.2.1.10) 0.9965 15 148 GO:0003855
GO:0009423
GO:0019631

Map