F351246

General Info

Members Datasets Scaffolds Average Seq Length
238 181 476 379

Family's Representative Sequence

Representative Sequence 3300046471|Ga0495650_0007482|Ga0495650_0007482_4506_5780
Length 424
Sequence MEWPMSKHRSRPFCEQVKTVTAHTEAPVPTIAFKKSVPMIESAHTHSRADLHRHISTAPEIIEEARAGRIFILVDDEDRENEGDLIVPAQFATPDVVNFMAMHARGLICLAMSRSRCDALGLSPMSQINGSQHETAFTVSIEAREGVSTGISAADRSRTISVAINPETTREDIVSPGHVFPLVARDGGTLVRAGHTEAAVDIARLAGLVPAGVICEIMNDDGTMARLPDLVTFAQKHNLKVGTIADLIAYRRCTEKLLQAVEHGEYTEPNGSHWRIVVYRNLVDRVEHVAFVMGDLSGDEPVLVRMHAVDTMNDIMGGHHLGSLRGAARMQSNEGRGVVVLIRESRPTAVSERVRSMMHPQPAEPMLRDYGVGAQILVDLGVKNMILLSNHERTIVGLEGYGLNLVEQRRIARVVPGSDAGLSE

Samples

Sample ID Description Type Environment
1 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
57 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
58 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
62 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
63 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
64 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
65 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
66 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
67 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
68 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
69 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
70 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
71 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
72 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
73 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
74 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
75 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
76 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
77 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
78 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
80 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
81 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
82 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
83 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
84 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
85 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
88 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
95 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
96 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
97 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
102 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
103 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
104 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
105 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
110 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
111 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
112 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
113 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
114 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
117 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
118 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
119 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
120 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
121 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
122 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
123 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
147 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
154 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
155 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
156 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
157 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
158 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
167 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
168 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
169 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
171 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
172 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
173 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
174 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
175 3300060344 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 36R_AW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
176 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
177 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
178 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
179 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
180 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
181 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.06
Metatranscriptomes 0.84
Isolates 2.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.66
Nodule 0.42
Rhizoplane 5.04
Rhizosphere 77.73
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495650_0007482 3300046471 Bacteria 6552
2 JGI25404J52841_10007356 3300003659 Bacteria 2327
3 Ga0070658_10000463 3300005327 Bacteria 35090
4 Ga0070682_100009770 3300005337 Bacteria 5433
5 Ga0070689_100260157 3300005340 Bacteria 1434
6 Ga0070691_10002415 3300005341 Bacteria 8285
7 Ga0070668_100129331 3300005347 Bacteria 2025
8 Ga0070659_100073270 3300005366 Bacteria 2726
9 Ga0070714_100187396 3300005435 Bacteria 1886
10 Ga0070713_100236421 3300005436 Bacteria 1662
11 Ga0070700_100008076 3300005441 Bacteria 5722
12 Ga0070694_100029778 3300005444 Bacteria 3565
13 Ga0070694_100174480 3300005444 Bacteria 1586
14 Ga0070678_100015214 3300005456 Bacteria 4883
15 Ga0070679_100004243 3300005530 Bacteria 13226
16 Ga0070695_100005510 3300005545 Bacteria 7457
17 Ga0070665_100249452 3300005548 Bacteria 1776
18 Ga0068861_100028075 3300005719 Bacteria 4105
19 Ga0068861_100124880 3300005719 Bacteria 2081
20 Ga0068862_100015340 3300005844 Bacteria 6363
21 Ga0081455_10000068 3300005937 Bacteria 112215
22 Ga0081538_10007081 3300005981 Bacteria 9746
23 Ga0081538_10026995 3300005981 Bacteria 3994
24 Ga0081540_1001179 3300005983 Bacteria 22879
25 Ga0081540_1003417 3300005983 Bacteria 12557
26 Ga0081539_10002783 3300005985 Bacteria 23498
27 Ga0075365_10048384 3300006038 Bacteria 2798
28 Ga0075368_10002835 3300006042 Bacteria 5720
29 Ga0075368_10005967 3300006042 Bacteria 4221
30 Ga0075368_10020596 3300006042 Bacteria 2499
31 Ga0075363_100022357 3300006048 Bacteria 3196
32 Ga0075364_10039126 3300006051 Bacteria 3073
33 Ga0075367_10035417 3300006178 Bacteria 2889
34 Ga0075367_10062798 3300006178 Bacteria 2219
35 Ga0068871_100226878 3300006358 Bacteria 1620
36 Ga0075428_100021041 3300006844 Bacteria 7224
37 Ga0075428_100111890 3300006844 Bacteria 2974
38 Ga0075431_100036679 3300006847 Bacteria 5049
39 Ga0075433_10007835 3300006852 Bacteria 8494
40 Ga0075434_100010174 3300006871 Bacteria 8809
41 Ga0075434_100013780 3300006871 Bacteria 7709
42 Ga0075435_100190045 3300007076 Bacteria 1738
43 Ga0105240_10005951 3300009093 Bacteria 18047
44 Ga0111539_10009692 3300009094 Bacteria 12156
45 Ga0111539_10015620 3300009094 Bacteria 9439
46 Ga0111539_10027951 3300009094 Bacteria 6888
47 Ga0111539_10091094 3300009094 Bacteria 3583
48 Ga0111539_10100176 3300009094 Bacteria 3402
49 Ga0114129_10005876 3300009147 Bacteria 17380
50 Ga0114129_10034540 3300009147 Bacteria 7143
51 Ga0114129_10193437 3300009147 Bacteria 2760
52 Ga0114129_10361703 3300009147 Bacteria 1920
53 Ga0114129_10466738 3300009147 Bacteria 1654
54 Ga0105237_10000014 3300009545 Bacteria 293492
55 Ga0105239_10308470 3300010375 Bacteria 1783
56 Ga0105246_10085749 3300011119 Bacteria 2256
57 Ga0157369_10032894 3300013105 Bacteria 5699
58 Ga0163163_10113329 3300014325 Bacteria 2742
59 Ga0213875_10006420 3300021388 Bacteria 6176
60 Ga0213875_10007600 3300021388 Bacteria 5589
61 Ga0213875_10010530 3300021388 Bacteria 4625
62 Ga0213871_10015333 3300021441 Bacteria 1831
63 Ga0207705_10005528 3300025909 Bacteria 9448
64 Ga0207695_10035624 3300025913 Bacteria 5393
65 Ga0207671_10000072 3300025914 Bacteria 159539
66 Ga0207652_10002669 3300025921 Bacteria 14967
67 Ga0207652_10007907 3300025921 Bacteria 8535
68 Ga0207687_10275610 3300025927 Bacteria 1346
69 Ga0207700_10098103 3300025928 Bacteria 2330
70 Ga0207664_10214899 3300025929 Bacteria 1665
71 Ga0207690_10042123 3300025932 Bacteria 2996
72 Ga0207678_10058087 3300026067 Bacteria 3329
73 Ga0207708_10015464 3300026075 Bacteria 5723
74 Ga0207675_100072235 3300026118 Bacteria 3227
75 Ga0207675_100093577 3300026118 Bacteria 2827
76 Ga0207683_10232391 3300026121 Bacteria 1682
77 Ga0209813_10011808 3300027866 Bacteria 2292
78 Ga0209813_10032584 3300027866 Bacteria 1545
79 Ga0207428_10001637 3300027907 Bacteria 23292
80 Ga0268265_10069560 3300028380 Bacteria 2734
81 Ga0265334_10036637 3300028573 Bacteria 1937
82 Ga0265338_10014564 3300028800 Bacteria 8736
83 Ga0265324_10011788 3300029957 Bacteria 3320
84 Ga0265328_10006055 3300031239 Bacteria 5149
85 Ga0265339_10071147 3300031249 Bacteria 1854
86 Ga0265331_10000161 3300031250 Bacteria 84155
87 Ga0307513_10005445 3300031456 Bacteria 16822
88 Ga0265313_10026482 3300031595 Bacteria 3053
89 Ga0316579_10009879 3300031691 Bacteria 4021
90 Ga0316578_10156035 3300031728 Bacteria 1375
91 Ga0307516_10000035 3300031730 Bacteria 152658
92 Ga0307416_100362726 3300032002 Bacteria 1472
93 Ga0307414_10041329 3300032004 Bacteria 3122
94 Ga0307414_10069860 3300032004 Bacteria 2526
95 Ga0307414_10107772 3300032004 Bacteria 2112
96 Ga0316583_10022739 3300032133 Bacteria 2243
97 Ga0316580_10023559 3300032139 Bacteria 1901
98 Ga0373928_0014742 3300035084 Bacteria 1584
99 Ga0373940_0002945 3300035088 Bacteria 3399
100 Ga0373940_0006626 3300035088 Bacteria 2579
101 Ga0373951_0008837 3300035091 Bacteria 2272
102 Ga0373952_0012403 3300035092 Bacteria 1676
103 Ga0373923_0010497 3300035111 Bacteria 3371
104 Ga0373953_0079667 3300035117 Bacteria 1360
105 Ga0373954_0088465 3300035118 Bacteria 1485
106 Ga0373956_0014912 3300035119 Bacteria 3250
107 Ga0373960_0003739 3300035121 Bacteria 3460
108 Ga0373961_0002670 3300035241 Bacteria 4576
109 Ga0373931_0005147 3300035691 Bacteria 6025
110 Ga0373927_0033658 3300035695 Bacteria 3336
111 Ga0373937_0000734 3300036401 Bacteria 28357
112 Ga0316582_0192238 3300036647 Bacteria 1390
113 Ga0373925_0005630 3300037068 Bacteria 9319
114 Ga0373925_0030311 3300037068 Bacteria 3970
115 Ga0395899_0006263 3300037312 Bacteria 9213
116 Ga0395900_0001859 3300037418 Bacteria 24050
117 Ga0395898_0014486 3300037466 Bacteria 8100
118 Ga0436364_0457983 3300037853 Bacteria 2053
119 Ga0436364_0583825 3300037853 Bacteria 10154
120 Ga0436364_0717105 3300037853 Bacteria 15067
121 Ga0436364_1415027 3300037853 Bacteria 3064
122 Ga0395901_0099178 3300038443 Bacteria 3054
123 Ga0400488_02955 3300038741 Bacteria 1959
124 Ga0400486_28604 3300038742 Bacteria 2790
125 Ga0436360_0171346 3300039438 Bacteria 3322
126 Ga0436360_0399912 3300039438 Bacteria 2800
127 Ga0436360_1218124 3300039438 Bacteria 2857
128 Ga0436363_0145731 3300039450 Bacteria 1943
129 Ga0436363_1307926 3300039450 Bacteria 1358
130 Ga0451577_0053769 3300042876 Bacteria 3595
131 Ga0466960_0023526 3300044901 Bacteria 2767
132 Ga0451576_0098661 3300045051 Bacteria 3039
133 Ga0451576_0455093 3300045051 Bacteria 1344
134 Ga0495592_0086902 3300046454 Bacteria 2251
135 Ga0495580_0029126 3300046472 Bacteria 4008
136 Ga0495580_0061604 3300046472 Bacteria 2634
137 Ga0495664_0026394 3300046477 Bacteria 3382
138 Ga0495628_0007096 3300046516 Bacteria 9704
139 Ga0495628_0079689 3300046516 Bacteria 2546
140 Ga0495648_0009573 3300046524 Bacteria 7478
141 Ga0495652_0126978 3300046529 Bacteria 2025
142 Ga0495667_0003743 3300046559 Bacteria 10229
143 Ga0495634_0190631 3300046642 Bacteria 1279
144 Ga0495599_0013458 3300046678 Bacteria 5055
145 Ga0495623_0066312 3300046679 Bacteria 2256
146 Ga0495624_0019331 3300046690 Bacteria 4550
147 Ga0495649_0002816 3300046694 Bacteria 12104
148 Ga0495649_0005053 3300046694 Bacteria 8476
149 Ga0495600_0026275 3300046809 Bacteria 3757
150 Ga0495604_0057775 3300047317 Bacteria 2982
151 Ga0495674_0056451 3300047319 Bacteria 3438
152 Ga0495672_0044855 3300047320 Bacteria 2649
153 Ga0495676_0016102 3300047321 Bacteria 6642
154 Ga0495676_0339997 3300047321 Bacteria 1005
155 Ga0495683_0011810 3300047323 Bacteria 4592
156 Ga0495679_002518 3300047446 Bacteria 9248
157 Ga0495673_0021938 3300047469 Bacteria 3139
158 Ga0495593_0028348 3300047673 Bacteria 3075
159 Ga0495602_0001050 3300048088 Bacteria 26998
160 Ga0496103_0166681 3300048906 Bacteria 1413
161 Ga0496104_0026308 3300048907 Bacteria 5370
162 Ga0496104_0290715 3300048907 Bacteria 1547
163 Ga0496105_0031393 3300048908 Bacteria 4355
164 Ga0496105_0035140 3300048908 Bacteria 4124
165 Ga0496107_0193175 3300048910 Bacteria 1513
166 Ga0496109_0021050 3300048912 Bacteria 5766
167 Ga0496110_0002581 3300048913 Bacteria 13623
168 Ga0496110_0034251 3300048913 Bacteria 4398
169 Ga0496112_0030917 3300048915 Bacteria 5188
170 Ga0496113_0017614 3300048916 Bacteria 4963
171 Ga0496115_0026780 3300048918 Bacteria 4504
172 Ga0496118_0023280 3300048921 Bacteria 5386
173 Ga0495682_0014590 3300049460 Bacteria 2978
174 Ga0501031_0044009 3300049568 Bacteria 2913
175 Ga0501034_0023873 3300049571 Bacteria 6226
176 Ga0501038_0230105 3300049574 Bacteria 1476
177 Ga0501039_0018602 3300049575 Bacteria 5332
178 Ga0501040_0222181 3300049576 Bacteria 1344
179 Ga0501041_0139432 3300049577 Bacteria 1512
180 Ga0501047_0012207 3300049581 Bacteria 8134
181 Ga0501047_0329292 3300049581 Bacteria 1366
182 Ga0501048_0003844 3300049582 Bacteria 11451
183 Ga0501048_0218951 3300049582 Bacteria 1350
184 Ga0501068_0063689 3300049584 Bacteria 2243
185 Ga0501072_0030723 3300049588 Bacteria 4202
186 Ga0501072_0170057 3300049588 Bacteria 1739
187 Ga0501073_0061839 3300049589 Bacteria 2612
188 Ga0501074_0016980 3300049590 Bacteria 5280
189 Ga0501074_0059043 3300049590 Bacteria 2764
190 Ga0501075_0011810 3300049591 Bacteria 6193
191 Ga0501075_0104433 3300049591 Bacteria 2153
192 Ga0501076_0011370 3300049592 Bacteria 6626
193 Ga0501077_0001036 3300049593 Bacteria 16800
194 Ga0501079_0002111 3300049741 Bacteria 14288
195 Ga0501079_0003928 3300049741 Bacteria 10982
196 Ga0501080_0063998 3300049742 Bacteria 3422
197 Ga0501081_0117984 3300049743 Bacteria 1888
198 Ga0501044_0035511 3300049823 Bacteria 5220
199 Ga0501044_0178132 3300049823 Bacteria 2094
200 Ga0501045_0063825 3300049824 Bacteria 2703
201 nmdc:mga03n38_1005_c1 3300050490 Bacteria 7714
202 nmdc:mga03n38_9772_c1 3300050490 Bacteria 3501
203 nmdc:mga00v17_67762_c1 3300050491 Bacteria 2206
204 nmdc:mga0yw44_64342_c1 3300050492 Bacteria 2257
205 nmdc:mga06z11_1897_c1 3300050494 Bacteria 7882
206 nmdc:mga06z11_7803_c1 3300050494 Bacteria 4425
207 nmdc:mga04h51_1496_c1 3300050495 Bacteria 5405
208 nmdc:mga05p37_87782_c1 3300050507 Bacteria 3833
209 nmdc:mga0qj67_88101_c1 3300050509 Bacteria 2492
210 nmdc:mga06r32_347507_c1 3300050510 Bacteria 1468
211 nmdc:mga06r32_415559_c1 3300050510 Bacteria 1327
212 nmdc:mga08y16_7423_c1 3300050511 Bacteria 11483
213 nmdc:mga08y16_82694_c1 3300050511 Bacteria 3347
214 nmdc:mga0n895_1427_c1 3300050512 Bacteria 17858
215 nmdc:mga0n895_306102_c1 3300050512 Bacteria 1611
216 nmdc:mga0rr50_177749_c1 3300050513 Bacteria 1738
217 nmdc:mga0a205_8997_c1 3300050515 Bacteria 9101
218 Ga0495601_0001228 3300053077 Bacteria 14075
219 Ga0495601_0180034 3300053077 Bacteria 1382
220 Ga0495612_0002265 3300053078 Bacteria 7919
221 Ga0500651_0044580 3300053093 Bacteria 2792
222 Ga0500556_0000902 3300053104 Bacteria 16533
223 Ga0500616_0005905 3300053153 Bacteria 8188
224 Ga0500616_0057278 3300053153 Bacteria 2031
225 Ga0500627_0057632 3300053158 Bacteria 1705
226 Ga0500637_0000389 3300053178 Bacteria 16734
227 Ga0501084_0003251 3300054114 Bacteria 13147
228 Ga0501084_0009665 3300054114 Bacteria 7978
229 Ga0501084_0040419 3300054114 Bacteria 3901
230 Ga0587073_0006238 3300059492 Bacteria 1823
231 Ga0587071_009165 3300060344 Bacteria 1621
232 Ga0501082_0017553 3300060353 Bacteria 6164
233 Ga0501082_0037478 3300060353 Bacteria 4179
234 2715499921 2713897090 Bacteria 3353799
235 2842778281 2842775625 Bacteria 5587290
236 2894775263 2894772417 Bacteria 5305674
237 2929202660 2929199973 Bacteria 7260745
238 8055910232 8055909800 Bacteria 7278581
239 Ga0495650_0007482
240 JGI25404J52841_10007356
241 Ga0070658_10000463
242 Ga0070682_100009770
243 Ga0070689_100260157
244 Ga0070691_10002415
245 Ga0070668_100129331
246 Ga0070659_100073270
247 Ga0070714_100187396
248 Ga0070713_100236421
249 Ga0070700_100008076
250 Ga0070694_100029778
251 Ga0070694_100174480
252 Ga0070678_100015214
253 Ga0070679_100004243
254 Ga0070695_100005510
255 Ga0070665_100249452
256 Ga0068861_100028075
257 Ga0068861_100124880
258 Ga0068862_100015340
259 Ga0081455_10000068
260 Ga0081538_10007081
261 Ga0081538_10026995
262 Ga0081540_1001179
263 Ga0081540_1003417
264 Ga0081539_10002783
265 Ga0075365_10048384
266 Ga0075368_10002835
267 Ga0075368_10005967
268 Ga0075368_10020596
269 Ga0075363_100022357
270 Ga0075364_10039126
271 Ga0075367_10035417
272 Ga0075367_10062798
273 Ga0068871_100226878
274 Ga0075428_100021041
275 Ga0075428_100111890
276 Ga0075431_100036679
277 Ga0075433_10007835
278 Ga0075434_100010174
279 Ga0075434_100013780
280 Ga0075435_100190045
281 Ga0105240_10005951
282 Ga0111539_10009692
283 Ga0111539_10015620
284 Ga0111539_10027951
285 Ga0111539_10091094
286 Ga0111539_10100176
287 Ga0114129_10005876
288 Ga0114129_10034540
289 Ga0114129_10193437
290 Ga0114129_10361703
291 Ga0114129_10466738
292 Ga0105237_10000014
293 Ga0105239_10308470
294 Ga0105246_10085749
295 Ga0157369_10032894
296 Ga0163163_10113329
297 Ga0213875_10006420
298 Ga0213875_10007600
299 Ga0213875_10010530
300 Ga0213871_10015333
301 Ga0207705_10005528
302 Ga0207695_10035624
303 Ga0207671_10000072
304 Ga0207652_10002669
305 Ga0207652_10007907
306 Ga0207687_10275610
307 Ga0207700_10098103
308 Ga0207664_10214899
309 Ga0207690_10042123
310 Ga0207678_10058087
311 Ga0207708_10015464
312 Ga0207675_100072235
313 Ga0207675_100093577
314 Ga0207683_10232391
315 Ga0209813_10011808
316 Ga0209813_10032584
317 Ga0207428_10001637
318 Ga0268265_10069560
319 Ga0265334_10036637
320 Ga0265338_10014564
321 Ga0265324_10011788
322 Ga0265328_10006055
323 Ga0265339_10071147
324 Ga0265331_10000161
325 Ga0307513_10005445
326 Ga0265313_10026482
327 Ga0316579_10009879
328 Ga0316578_10156035
329 Ga0307516_10000035
330 Ga0307416_100362726
331 Ga0307414_10041329
332 Ga0307414_10069860
333 Ga0307414_10107772
334 Ga0316583_10022739
335 Ga0316580_10023559
336 Ga0373928_0014742
337 Ga0373940_0002945
338 Ga0373940_0006626
339 Ga0373951_0008837
340 Ga0373952_0012403
341 Ga0373923_0010497
342 Ga0373953_0079667
343 Ga0373954_0088465
344 Ga0373956_0014912
345 Ga0373960_0003739
346 Ga0373961_0002670
347 Ga0373931_0005147
348 Ga0373927_0033658
349 Ga0373937_0000734
350 Ga0316582_0192238
351 Ga0373925_0005630
352 Ga0373925_0030311
353 Ga0395899_0006263
354 Ga0395900_0001859
355 Ga0395898_0014486
356 Ga0436364_0457983
357 Ga0436364_0583825
358 Ga0436364_0717105
359 Ga0436364_1415027
360 Ga0395901_0099178
361 Ga0400488_02955
362 Ga0400486_28604
363 Ga0436360_0171346
364 Ga0436360_0399912
365 Ga0436360_1218124
366 Ga0436363_0145731
367 Ga0436363_1307926
368 Ga0451577_0053769
369 Ga0466960_0023526
370 Ga0451576_0098661
371 Ga0451576_0455093
372 Ga0495592_0086902
373 Ga0495580_0029126
374 Ga0495580_0061604
375 Ga0495664_0026394
376 Ga0495628_0007096
377 Ga0495628_0079689
378 Ga0495648_0009573
379 Ga0495652_0126978
380 Ga0495667_0003743
381 Ga0495634_0190631
382 Ga0495599_0013458
383 Ga0495623_0066312
384 Ga0495624_0019331
385 Ga0495649_0002816
386 Ga0495649_0005053
387 Ga0495600_0026275
388 Ga0495604_0057775
389 Ga0495674_0056451
390 Ga0495672_0044855
391 Ga0495676_0016102
392 Ga0495676_0339997
393 Ga0495683_0011810
394 Ga0495679_002518
395 Ga0495673_0021938
396 Ga0495593_0028348
397 Ga0495602_0001050
398 Ga0496103_0166681
399 Ga0496104_0026308
400 Ga0496104_0290715
401 Ga0496105_0031393
402 Ga0496105_0035140
403 Ga0496107_0193175
404 Ga0496109_0021050
405 Ga0496110_0002581
406 Ga0496110_0034251
407 Ga0496112_0030917
408 Ga0496113_0017614
409 Ga0496115_0026780
410 Ga0496118_0023280
411 Ga0495682_0014590
412 Ga0501031_0044009
413 Ga0501034_0023873
414 Ga0501038_0230105
415 Ga0501039_0018602
416 Ga0501040_0222181
417 Ga0501041_0139432
418 Ga0501047_0012207
419 Ga0501047_0329292
420 Ga0501048_0003844
421 Ga0501048_0218951
422 Ga0501068_0063689
423 Ga0501072_0030723
424 Ga0501072_0170057
425 Ga0501073_0061839
426 Ga0501074_0016980
427 Ga0501074_0059043
428 Ga0501075_0011810
429 Ga0501075_0104433
430 Ga0501076_0011370
431 Ga0501077_0001036
432 Ga0501079_0002111
433 Ga0501079_0003928
434 Ga0501080_0063998
435 Ga0501081_0117984
436 Ga0501044_0035511
437 Ga0501044_0178132
438 Ga0501045_0063825
439 nmdc:mga03n38_1005_c1
440 nmdc:mga03n38_9772_c1
441 nmdc:mga00v17_67762_c1
442 nmdc:mga0yw44_64342_c1
443 nmdc:mga06z11_1897_c1
444 nmdc:mga06z11_7803_c1
445 nmdc:mga04h51_1496_c1
446 nmdc:mga05p37_87782_c1
447 nmdc:mga0qj67_88101_c1
448 nmdc:mga06r32_347507_c1
449 nmdc:mga06r32_415559_c1
450 nmdc:mga08y16_7423_c1
451 nmdc:mga08y16_82694_c1
452 nmdc:mga0n895_1427_c1
453 nmdc:mga0n895_306102_c1
454 nmdc:mga0rr50_177749_c1
455 nmdc:mga0a205_8997_c1
456 Ga0495601_0001228
457 Ga0495601_0180034
458 Ga0495612_0002265
459 Ga0500651_0044580
460 Ga0500556_0000902
461 Ga0500616_0005905
462 Ga0500616_0057278
463 Ga0500627_0057632
464 Ga0500637_0000389
465 Ga0501084_0003251
466 Ga0501084_0009665
467 Ga0501084_0040419
468 Ga0587073_0006238
469 Ga0587071_009165
470 Ga0501082_0017553
471 Ga0501082_0037478
472 2715499921
473 2842778281
474 2894775263
475 2929202660
476 8055910232

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00926

DHBP_synthase

3,4-dihydroxy-2-butanone 4-phosphate synthase

59

250

0.99

PF00925

GTP_cyclohydro2

GTP cyclohydrolase II

260

410

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4p8j-assembly1.cif.gz_A structure of ribb 0.8957 20 218
7uez-assembly1.cif.gz_A apo ribb from vibrio cholera 0.8867 20 218
7uf5-assembly1.cif.gz_A-2 ribb from vibrio cholera bound with intermediate 2 in the reaction cycle and the products dhbp and formate 0.8839 20 215
7uf2-assembly1.cif.gz_A-2 ribb from vibrio cholera bound with d-xylulose-5-phosphate (d-xy5p) and manganese 0.8812 20 215
4i14-assembly1.cif.gz_B crystal structure of mtb-riba2 (rv1415) 0.8775 17 383
ID Description Score Start End Superfamily
4i14B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTP cyclohydrolase II 0.8999 221 383 3.40.50.10990
4i14B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTP cyclohydrolase II 0.8789 221 383 3.40.50.10990
4ffjA00 Alpha Beta;Alpha-Beta Complex;DHBP synthase;DHBP synthase 0.8771 20 218 3.90.870.10
3mgzA00 Alpha Beta;Alpha-Beta Complex;DHBP synthase;DHBP synthase 0.8657 17 217 3.90.870.10
af_Q2FXG1_1_204_3.90.870.10 Alpha Beta;Alpha-Beta Complex;DHBP synthase;DHBP synthase 0.8647 17 218 3.90.870.10
ID Description Score Start End GO Terms
AF-A0A1Q9C9X7-F1-model_v4 3,4-dihydroxy-2-butanone-4-phosphate synthase (EC 4.1.99.12) 0.9287 110 216 GO:0005829
GO:0008686
GO:0009231
GO:0046872
AF-A0A4Q4CPB2-F1-model_v4 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.9079 204 385 GO:0005829
GO:0008686
GO:0009231
AF-A0A3A0FD86-F1-model_v4 Bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.8946 208 385 GO:0005829
GO:0008686
GO:0009231
GO:0016787
AF-A0A4Q4CPB2-F1-model_v4 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.8784 204 385 GO:0005829
GO:0008686
GO:0009231
AF-A0A4V1L567-F1-model_v4 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (EC 4.1.99.12) 0.8692 17 218 GO:0000287
GO:0005829
GO:0008686
GO:0009231
GO:0030145

Map