F351083

General Info

Members Datasets Scaffolds Average Seq Length
238 167 237 406

Family's Representative Sequence

Representative Sequence 3300031251|Ga0265327_10022092|Ga0265327_100220922
Length 456
Sequence MPQDLNAVTSPPGAISXXXGVNLTEDSLTKSPSVETESVTRGGPSAKCRRAWSWERWLIERVYQRAGRPRLGIELWDGTVIGEPQSSVGRIVMTNPRVLRRLAWNTNLAFGECHSDGSLQVVGDLREVLLEVNRGLSRARGQRPLRRWIARSHSLENSKSSVHHHYDLGNDFYKLWLDDQLVYTCAYYAQPDLDLHQAQLAKLDYVCRKLRLQPGERVVEAGCGWGALAMHMARHYGVTVQAYNLSTEQIEHAKTWAAAEGLGDRVQFCQADYRQMTGQFDVFVSVGMLEHVGLEQYPAMGQLMSRVLTPAGRGLIHTIGRNISRPLDPWTDKYIFPGAHPPTLGEMMSLFEESGFSVLDVENLRMHYARTCADWLHRFDQVADQVERMFDARFVRMWRLYLAASSATFETGDLQLFQVVFARAENNSLPWTRADWYADSDAIRDSGLAEPLPWKP

Samples

Sample ID Description Type Environment
1 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
84 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
85 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
86 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
87 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
91 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
92 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
95 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
102 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
103 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
104 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
105 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
107 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
108 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
109 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
110 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
111 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
112 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
113 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
114 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
115 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
122 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
125 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
126 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
153 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
158 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
159 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
160 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
161 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
162 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
163 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
164 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
165 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
166 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
167 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.96
Metatranscriptomes 4.62
Isolates 0.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.26
Rhizosphere 97.9
Stem 0
Stem Tuber 0
Unclassified 0.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0058863_10042260 3300004799 Bacteria 1822
2 Ga0065707_10108060 3300005295 Bacteria 2526
3 Ga0065707_10111436 3300005295 Bacteria 2361
4 Ga0070683_100086978 3300005329 Unclassified 2931
5 Ga0070690_100003930 3300005330 Bacteria 8202
6 Ga0070680_100023570 3300005336 Bacteria 4909
7 Ga0070689_100000066 3300005340 Bacteria 62639
8 Ga0070687_100013658 3300005343 Bacteria 3625
9 Ga0070675_100000029 3300005354 Bacteria 102686
10 Ga0070688_100000114 3300005365 Bacteria 41990
11 Ga0070714_100001865 3300005435 Bacteria 15359
12 Ga0070713_100006834 3300005436 Bacteria 7950
13 Ga0070713_100049288 3300005436 Bacteria 3474
14 Ga0070701_10000609 3300005438 Bacteria 12503
15 Ga0070711_100061516 3300005439 Bacteria 2614
16 Ga0070700_100001012 3300005441 Bacteria 13886
17 Ga0070694_100064062 3300005444 Bacteria 2515
18 Ga0070708_100310574 3300005445 Bacteria 1485
19 Ga0070681_10210716 3300005458 Bacteria 1859
20 Ga0070681_10345854 3300005458 Unclassified 1397
21 Ga0068867_100033824 3300005459 Bacteria 3704
22 Ga0070685_10000069 3300005466 Bacteria 60941
23 Ga0070698_100071857 3300005471 Bacteria 3469
24 Ga0070698_100185650 3300005471 Bacteria 2017
25 Ga0070699_100156137 3300005518 Bacteria 2019
26 Ga0070679_100133966 3300005530 Bacteria 2459
27 Ga0070679_100150090 3300005530 Bacteria 2308
28 Ga0070686_100000100 3300005544 Bacteria 59351
29 Ga0070695_100106518 3300005545 Bacteria 1896
30 Ga0070665_100223461 3300005548 Unclassified 1884
31 Ga0070704_100012313 3300005549 Bacteria 5282
32 Ga0070704_100205415 3300005549 Unclassified 1593
33 Ga0068855_100252738 3300005563 Bacteria 1966
34 Ga0068857_100034043 3300005577 Unclassified 4507
35 Ga0068859_100006952 3300005617 Bacteria 11493
36 Ga0068861_100048153 3300005719 Unclassified 3221
37 Ga0070717_10013690 3300006028 Bacteria 6223
38 Ga0070717_10056029 3300006028 Bacteria 3255
39 Ga0070717_10149482 3300006028 Bacteria 2020
40 Ga0070715_10015414 3300006163 Bacteria 2850
41 Ga0097621_100016015 3300006237 Bacteria 5655
42 Ga0068871_100018606 3300006358 Bacteria 5285
43 Ga0075428_100000895 3300006844 Bacteria 31408
44 Ga0075428_100170570 3300006844 Bacteria 2359
45 Ga0075428_100217536 3300006844 Bacteria 2063
46 Ga0075428_100246696 3300006844 Bacteria 1925
47 Ga0075428_100263896 3300006844 Bacteria 1854
48 Ga0075430_100047322 3300006846 Bacteria 3631
49 Ga0075431_100069896 3300006847 Bacteria 3622
50 Ga0075433_10013743 3300006852 Bacteria 6594
51 Ga0075433_10072604 3300006852 Bacteria 3026
52 Ga0075433_10179876 3300006852 Bacteria 1882
53 Ga0075434_100059296 3300006871 Bacteria 3804
54 Ga0075434_100067950 3300006871 Bacteria 3550
55 Ga0075429_100010413 3300006880 Bacteria 8047
56 Ga0068865_100177927 3300006881 Bacteria 1636
57 Ga0075436_100115587 3300006914 Bacteria 1874
58 Ga0075436_100127986 3300006914 Bacteria 1780
59 Ga0097620_100006951 3300006931 Bacteria 11493
60 Ga0075435_100127311 3300007076 Bacteria 2129
61 Ga0099794_10024204 3300007265 Archaea 2785
62 Ga0111539_10111190 3300009094 Unclassified 3215
63 Ga0111539_10259427 3300009094 Bacteria 2023
64 Ga0111539_10259626 3300009094 Bacteria 2022
65 Ga0111539_10277914 3300009094 Unclassified 1949
66 Ga0105245_10167000 3300009098 Bacteria 2093
67 Ga0114129_10006301 3300009147 Bacteria 16822
68 Ga0114129_10017623 3300009147 Bacteria 10167
69 Ga0114129_10019705 3300009147 Bacteria 9602
70 Ga0114129_10048350 3300009147 Bacteria 5976
71 Ga0114129_10061956 3300009147 Bacteria 5227
72 Ga0114129_10145365 3300009147 Bacteria 3249
73 Ga0105242_10162029 3300009176 Unclassified 1959
74 Ga0105248_10001555 3300009177 Bacteria 25557
75 Ga0105248_10098072 3300009177 Bacteria 3301
76 Ga0157373_10037071 3300013100 Bacteria 3498
77 Ga0157370_10052769 3300013104 Bacteria 3880
78 Ga0157369_10011597 3300013105 Bacteria 10007
79 Ga0157369_10114985 3300013105 Bacteria 2857
80 Ga0157378_10070382 3300013297 Unclassified 3141
81 Ga0163163_10006167 3300014325 Bacteria 10450
82 Ga0163163_10154267 3300014325 Unclassified 2340
83 Ga0157380_10009107 3300014326 Bacteria 7096
84 Ga0157380_10077701 3300014326 Bacteria 2706
85 Ga0157377_10018777 3300014745 Bacteria 3600
86 Ga0157379_10146704 3300014968 Unclassified 2128
87 Ga0206351_10156984 3300020077 Bacteria 1400
88 Ga0206350_10653391 3300020080 Bacteria 1690
89 Ga0206353_10407574 3300020082 Bacteria 1537
90 Ga0154015_1604696 3300020610 Bacteria 2363
91 Ga0207680_10025513 3300025903 Bacteria 3261
92 Ga0207685_10040500 3300025905 Bacteria 1737
93 Ga0207684_10020826 3300025910 Bacteria 5602
94 Ga0207684_10134219 3300025910 Bacteria 2125
95 Ga0207707_10095911 3300025912 Bacteria 2592
96 Ga0207695_10140180 3300025913 Bacteria 2367
97 Ga0207662_10011780 3300025918 Bacteria 4859
98 Ga0207659_10000073 3300025926 Bacteria 64021
99 Ga0207700_10005089 3300025928 Bacteria 7817
100 Ga0207664_10000970 3300025929 Bacteria 19337
101 Ga0207670_10000098 3300025936 Bacteria 60320
102 Ga0207711_10004753 3300025941 Bacteria 11532
103 Ga0207711_10120804 3300025941 Bacteria 2339
104 Ga0207711_10138908 3300025941 Unclassified 2185
105 Ga0207689_10112109 3300025942 Bacteria 2242
106 Ga0207667_10046328 3300025949 Unclassified 4604
107 Ga0207708_10005650 3300026075 Bacteria 9238
108 Ga0207702_10368411 3300026078 Bacteria 1379
109 Ga0207641_10527940 3300026088 Bacteria 1149
110 Ga0207648_10009584 3300026089 Bacteria 9266
111 Ga0207648_10014115 3300026089 Bacteria 7388
112 Ga0207674_10068194 3300026116 Unclassified 3580
113 Ga0207675_100099256 3300026118 Bacteria 2743
114 Ga0265334_10000143 3300028573 Bacteria 44504
115 Ga0265318_10002921 3300028577 Bacteria 8868
116 Ga0265330_10001365 3300031235 Bacteria 14239
117 Ga0265328_10003332 3300031239 Bacteria 7101
118 Ga0265325_10008322 3300031241 Bacteria 6126
119 Ga0265331_10001902 3300031250 Bacteria 14645
120 Ga0265327_10022092 3300031251 Bacteria 3818
121 Ga0265313_10001243 3300031595 Bacteria 24298
122 Ga0316575_10009121 3300031665 Bacteria 3627
123 Ga0316575_10011560 3300031665 Bacteria 3268
124 Ga0316579_10016585 3300031691 Bacteria 3220
125 Ga0265342_10022650 3300031712 Bacteria 3990
126 Ga0316576_10041869 3300031727 Bacteria 3299
127 Ga0316578_10041113 3300031728 Bacteria 2676
128 Ga0307405_10079164 3300031731 Bacteria 2141
129 Ga0316577_10007395 3300031733 Bacteria 5858
130 Ga0307412_10219865 3300031911 Bacteria 1455
131 Ga0307409_100043397 3300031995 Bacteria 3376
132 Ga0307416_100023925 3300032002 Bacteria 4445
133 Ga0307414_10099075 3300032004 Bacteria 2189
134 Ga0316583_10026930 3300032133 Bacteria 2052
135 Ga0316585_10027262 3300032137 Bacteria 1781
136 Ga0316580_10011924 3300032139 Bacteria 2642
137 Ga0316593_10021074 3300032168 Unclassified 2034
138 Ga0373923_0016193 3300035111 Bacteria 2827
139 Ga0373953_0006018 3300035117 Bacteria 3973
140 Ga0373954_0019431 3300035118 Bacteria 3065
141 Ga0373942_0055557 3300035207 Bacteria 1122
142 Ga0316574_0011793 3300035398 Bacteria 4977
143 Ga0316574_0017658 3300035398 Bacteria 4180
144 Ga0316574_0050781 3300035398 Bacteria 2582
145 Ga0373924_0015218 3300035410 Bacteria 2921
146 Ga0373933_0046694 3300035724 Bacteria 2573
147 Ga0373937_0015393 3300036401 Bacteria 6764
148 Ga0373937_0074459 3300036401 Bacteria 3133
149 Ga0373937_0096987 3300036401 Bacteria 2734
150 Ga0373937_0148177 3300036401 Bacteria 2198
151 Ga0316582_0012327 3300036647 Bacteria 4765
152 Ga0316582_0019193 3300036647 Bacteria 3996
153 Ga0316582_0021621 3300036647 Bacteria 3806
154 Ga0316582_0025378 3300036647 Bacteria 3558
155 Ga0316584_0001430 3300036712 Bacteria 14290
156 Ga0316584_0007275 3300036712 Bacteria 7557
157 Ga0316584_0073169 3300036712 Bacteria 2568
158 Ga0316584_0085413 3300036712 Bacteria 2363
159 Ga0316584_0119234 3300036712 Bacteria 1972
160 Ga0316584_0164526 3300036712 Bacteria 1647
161 Ga0395905_0151759 3300037471 Bacteria 2180
162 Ga0395905_0223325 3300037471 Bacteria 1763
163 Ga0316581_0021033 3300037588 Bacteria 1914
164 Ga0436364_1536136 3300037853 Bacteria 7498
165 Ga0439446_0028582 3300042156 Bacteria 1606
166 Ga0451577_0006248 3300042876 Bacteria 11938
167 Ga0451577_0103161 3300042876 Bacteria 2549
168 Ga0453683_0000244 3300044673 Bacteria 72720
169 Ga0453684_0001109 3300044712 Bacteria 84626
170 Ga0453684_0050580 3300044712 Bacteria 5463
171 Ga0451576_0007024 3300045051 Bacteria 13613
172 Ga0451576_0356223 3300045051 Bacteria 1532
173 Ga0495628_0031672 3300046516 Bacteria 4277
174 Ga0495586_0195863 3300046535 Bacteria 1145
175 Ga0495598_0029250 3300046537 Bacteria 1535
176 Ga0496102_0369521 3300048905 Bacteria 1350
177 Ga0496109_0228227 3300048912 Unclassified 1751
178 Ga0496113_0064536 3300048916 Bacteria 2769
179 Ga0501031_0107139 3300049568 Unclassified 1824
180 Ga0501033_0003167 3300049570 Bacteria 13663
181 Ga0501033_0274072 3300049570 Bacteria 1192
182 Ga0501034_0014504 3300049571 Bacteria 8115
183 Ga0501036_0026713 3300049572 Bacteria 4877
184 Ga0501036_0038371 3300049572 Unclassified 4054
185 Ga0501037_0001811 3300049573 Bacteria 15525
186 Ga0501038_0002346 3300049574 Bacteria 17652
187 Ga0501038_0058278 3300049574 Unclassified 3312
188 Ga0501039_0052921 3300049575 Bacteria 3141
189 Ga0501040_0031825 3300049576 Unclassified 3566
190 Ga0501041_0011960 3300049577 Bacteria 5138
191 Ga0501041_0031690 3300049577 Bacteria 3195
192 Ga0501042_0020355 3300049578 Bacteria 4618
193 Ga0501042_0069314 3300049578 Unclassified 2522
194 Ga0501046_0023428 3300049580 Bacteria 5080
195 Ga0501046_0062659 3300049580 Unclassified 2905
196 Ga0501046_0117239 3300049580 Bacteria 2028
197 Ga0501047_0013656 3300049581 Bacteria 7708
198 Ga0501048_0028782 3300049582 Bacteria 4033
199 Ga0501048_0072994 3300049582 Bacteria 2422
200 Ga0501048_0092306 3300049582 Unclassified 2135
201 Ga0501068_0054523 3300049584 Bacteria 2422
202 Ga0501071_0020959 3300049587 Bacteria 4549
203 Ga0501071_0035727 3300049587 Unclassified 3541
204 Ga0501071_0068533 3300049587 Bacteria 2582
205 Ga0501072_0017780 3300049588 Bacteria 5467
206 Ga0501072_0078054 3300049588 Bacteria 2622
207 Ga0501073_0005125 3300049589 Bacteria 9831
208 Ga0501074_0007247 3300049590 Bacteria 8013
209 Ga0501075_0066964 3300049591 Bacteria 2711
210 Ga0501075_0091653 3300049591 Bacteria 2306
211 Ga0501076_0026673 3300049592 Bacteria 4477
212 Ga0501076_0030409 3300049592 Bacteria 4206
213 Ga0501079_0023474 3300049741 Bacteria 4732
214 Ga0501081_0023106 3300049743 Bacteria 4166
215 Ga0501081_0163857 3300049743 Unclassified 1603
216 Ga0501083_0190415 3300049744 Bacteria 1339
217 Ga0501045_0047289 3300049824 Bacteria 3134
218 Ga0501045_0088197 3300049824 Unclassified 2291
219 nmdc:mga05p37_48759_c1 3300050507 Bacteria 5208
220 nmdc:mga05p37_98_c1 3300050507 Bacteria 78110
221 nmdc:mga0qj67_95842_c1 3300050509 Bacteria 2389
222 nmdc:mga08y16_226734_c1 3300050511 Bacteria 1933
223 nmdc:mga08y16_488966_c1 3300050511 Bacteria 1252
224 nmdc:mga08y16_59238_c1 3300050511 Bacteria 4000
225 nmdc:mga08y16_69814_c1 3300050511 Bacteria 3662
226 nmdc:mga0a205_20110_c1 3300050515 Bacteria 6299
227 Ga0501084_0130989 3300054114 Unclassified 2111
228 Ga0590071_001909 3300059421 Bacteria 5340
229 Ga0590077_001476 3300059426 Bacteria 5487
230 Ga0587066_007109 3300059490 Unclassified 1504
231 Ga0587073_0003105 3300059492 Bacteria 2237
232 Ga0587082_007104 3300059504 Unclassified 1518
233 Ga0587091_004709 3300059511 Bacteria 1811
234 Ga0587076_002780 3300059645 Bacteria 2005
235 Ga0501082_0027730 3300060353 Bacteria 4876
236 Ga0530510_0002579 3300061734 Bacteria 12452
237 Ga0530510_0007192 3300061734 Bacteria 7745

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300026088 Ga0207641_10527940 Ga0207641_105279401 294
2 3300048905 Ga0496102_0369521 Ga0496102_0369521_131_1132 326
3 3300042156 Ga0439446_0028582 Ga0439446_0028582_102_1130 327
4 3300049591 Ga0501075_0091653 Ga0501075_0091653_1200_2270 327
5 3300049744 Ga0501083_0190415 Ga0501083_0190415_86_1156 327
6 3300049824 Ga0501045_0047289 Ga0501045_0047289_1704_2774 327
7 3300049570 Ga0501033_0274072 Ga0501033_0274072_55_1128 328
8 3300035207 Ga0373942_0055557 Ga0373942_0055557_64_1095 330
9 3300007265 Ga0099794_10024204 Ga0099794_100242042 345
10 3300042876 Ga0451577_0006248 Ga0451577_0006248_10585_11664 348
11 3300044712 Ga0453684_0001109 Ga0453684_0001109_76594_77673 348
12 3300044712 Ga0453684_0050580 Ga0453684_0050580_430_1509 348
13 3300045051 Ga0451576_0356223 Ga0451576_0356223_411_1490 348
14 3300046516 Ga0495628_0031672 Ga0495628_0031672_3069_4160 356
15 3300046535 Ga0495586_0195863 Ga0495586_0195863_31_1122 356
16 3300046537 Ga0495598_0029250 Ga0495598_0029250_397_1491 356
17 3300059421 Ga0590071_001909 Ga0590071_001909_2983_4251 365
18 3300059426 Ga0590077_001476 Ga0590077_001476_3372_4640 365
19 3300005471 Ga0070698_100071857 Ga0070698_1000718572 368
20 3300014326 Ga0157380_10077701 Ga0157380_100777013 368
21 3300025910 Ga0207684_10020826 Ga0207684_100208263 368
22 3300049592 Ga0501076_0026673 Ga0501076_0026673_1477_2724 370
23 iso_pu_bacteria 2857591370 2857592064 373
24 3300005354 Ga0070675_100000029 Ga0070675_10000002944 375
25 3300006844 Ga0075428_100263896 Ga0075428_1002638962 375
26 3300006852 Ga0075433_10179876 Ga0075433_101798761 375
27 3300009094 Ga0111539_10111190 Ga0111539_101111902 375
28 3300009094 Ga0111539_10277914 Ga0111539_102779142 375
29 3300009147 Ga0114129_10006301 Ga0114129_1000630121 375
30 3300009147 Ga0114129_10048350 Ga0114129_100483505 375
31 3300014745 Ga0157377_10018777 Ga0157377_100187772 375
32 3300025926 Ga0207659_10000073 Ga0207659_1000007343 375
33 3300049587 Ga0501071_0068533 Ga0501071_0068533_31_1203 375
34 3300050507 nmdc:mga05p37_98_c1 nmdc:mga05p37_98_c1_55572_56798 375
35 3300050511 nmdc:mga08y16_488966_c1 nmdc:mga08y16_488966_c1_41_1213 375
36 3300050511 nmdc:mga08y16_69814_c1 nmdc:mga08y16_69814_c1_1958_3130 375
37 3300006844 Ga0075428_100170570 Ga0075428_1001705702 376
38 3300036647 Ga0316582_0012327 Ga0316582_0012327_2974_4161 376
39 3300036712 Ga0316584_0001430 Ga0316584_0001430_4329_5525 377
40 3300049743 Ga0501081_0163857 Ga0501081_0163857_341_1534 377
41 3300049824 Ga0501045_0088197 Ga0501045_0088197_95_1288 377
42 3300005295 Ga0065707_10108060 Ga0065707_101080602 378
43 3300005330 Ga0070690_100003930 Ga0070690_1000039303 378
44 3300005340 Ga0070689_100000066 Ga0070689_10000006663 378
45 3300005343 Ga0070687_100013658 Ga0070687_1000136582 378
46 3300005365 Ga0070688_100000114 Ga0070688_10000011442 378
47 3300005438 Ga0070701_10000609 Ga0070701_100006094 378
48 3300005441 Ga0070700_100001012 Ga0070700_1000010128 378
49 3300005444 Ga0070694_100064062 Ga0070694_1000640623 378
50 3300005459 Ga0068867_100033824 Ga0068867_1000338243 378
51 3300005466 Ga0070685_10000069 Ga0070685_100000698 378
52 3300005530 Ga0070679_100133966 Ga0070679_1001339663 378
53 3300005544 Ga0070686_100000100 Ga0070686_10000010059 378
54 3300005545 Ga0070695_100106518 Ga0070695_1001065182 378
55 3300005549 Ga0070704_100012313 Ga0070704_1000123133 378
56 3300005617 Ga0068859_100006952 Ga0068859_1000069528 378
57 3300005719 Ga0068861_100048153 Ga0068861_1000481531 378
58 3300006163 Ga0070715_10015414 Ga0070715_100154142 378
59 3300006237 Ga0097621_100016015 Ga0097621_1000160155 378
60 3300006358 Ga0068871_100018606 Ga0068871_1000186065 378
61 3300006852 Ga0075433_10013743 Ga0075433_100137432 378
62 3300006871 Ga0075434_100059296 Ga0075434_1000592963 378
63 3300006881 Ga0068865_100177927 Ga0068865_1001779272 378
64 3300006914 Ga0075436_100115587 Ga0075436_1001155872 378
65 3300006931 Ga0097620_100006951 Ga0097620_1000069518 378
66 3300007076 Ga0075435_100127311 Ga0075435_1001273112 378
67 3300009176 Ga0105242_10162029 Ga0105242_101620291 378
68 3300009177 Ga0105248_10001555 Ga0105248_100015558 378
69 3300013297 Ga0157378_10070382 Ga0157378_100703822 378
70 3300014326 Ga0157380_10009107 Ga0157380_100091077 378
71 3300014968 Ga0157379_10146704 Ga0157379_101467041 378
72 3300025905 Ga0207685_10040500 Ga0207685_100405001 378
73 3300025912 Ga0207707_10095911 Ga0207707_100959112 378
74 3300025918 Ga0207662_10011780 Ga0207662_100117803 378
75 3300025936 Ga0207670_10000098 Ga0207670_1000009860 378
76 3300025941 Ga0207711_10004753 Ga0207711_1000475310 378
77 3300025942 Ga0207689_10112109 Ga0207689_101121091 378
78 3300026075 Ga0207708_10005650 Ga0207708_100056504 378
79 3300026089 Ga0207648_10009584 Ga0207648_100095849 378
80 3300026118 Ga0207675_100099256 Ga0207675_1000992563 378
81 3300050515 nmdc:mga0a205_20110_c1 nmdc:mga0a205_20110_c1_206_1393 378
82 3300005295 Ga0065707_10111436 Ga0065707_101114362 379
83 3300013100 Ga0157373_10037071 Ga0157373_100370712 379
84 3300013104 Ga0157370_10052769 Ga0157370_100527693 379
85 3300013105 Ga0157369_10114985 Ga0157369_101149852 379
86 3300050511 nmdc:mga08y16_59238_c1 nmdc:mga08y16_59238_c1_1039_2265 379
87 3300009098 Ga0105245_10167000 Ga0105245_101670002 380
88 3300009147 Ga0114129_10017623 Ga0114129_100176239 380
89 3300005549 Ga0070704_100205415 Ga0070704_1002054151 381
90 3300009177 Ga0105248_10098072 Ga0105248_100980722 381
91 3300025903 Ga0207680_10025513 Ga0207680_100255132 381
92 3300025910 Ga0207684_10134219 Ga0207684_101342191 381
93 3300025941 Ga0207711_10120804 Ga0207711_101208042 381
94 3300036401 Ga0373937_0148177 Ga0373937_0148177_412_1632 381
95 3300005439 Ga0070711_100061516 Ga0070711_1000615163 382
96 3300028573 Ga0265334_10000143 Ga0265334_1000014328 382
97 3300028577 Ga0265318_10002921 Ga0265318_100029215 382
98 3300031235 Ga0265330_10001365 Ga0265330_1000136512 382
99 3300031239 Ga0265328_10003332 Ga0265328_100033324 382
100 3300031241 Ga0265325_10008322 Ga0265325_100083225 382
101 3300031250 Ga0265331_10001902 Ga0265331_100019024 382
102 3300031595 Ga0265313_10001243 Ga0265313_1000124311 382
103 3300031712 Ga0265342_10022650 Ga0265342_100226502 382
104 3300035398 Ga0316574_0011793 Ga0316574_0011793_1048_2226 382
105 3300036647 Ga0316582_0025378 Ga0316582_0025378_2215_3393 382
106 3300035111 Ga0373923_0016193 Ga0373923_0016193_400_1704 383
107 3300035117 Ga0373953_0006018 Ga0373953_0006018_1079_2383 383
108 3300035118 Ga0373954_0019431 Ga0373954_0019431_288_1592 383
109 3300035410 Ga0373924_0015218 Ga0373924_0015218_1249_2553 383
110 3300036401 Ga0373937_0015393 Ga0373937_0015393_3078_4382 383
111 3300042876 Ga0451577_0103161 Ga0451577_0103161_40_1290 383
112 3300049568 Ga0501031_0107139 Ga0501031_0107139_215_1450 383
113 3300049572 Ga0501036_0038371 Ga0501036_0038371_1649_2884 383
114 3300049576 Ga0501040_0031825 Ga0501040_0031825_115_1350 383
115 3300049577 Ga0501041_0011960 Ga0501041_0011960_3415_4650 383
116 3300049578 Ga0501042_0069314 Ga0501042_0069314_1245_2480 383
117 3300049580 Ga0501046_0062659 Ga0501046_0062659_1463_2698 383
118 3300049582 Ga0501048_0092306 Ga0501048_0092306_299_1534 383
119 3300049587 Ga0501071_0035727 Ga0501071_0035727_297_1532 383
120 3300049588 Ga0501072_0017780 Ga0501072_0017780_477_1712 383
121 3300054114 Ga0501084_0130989 Ga0501084_0130989_472_1707 383
122 3300061734 Ga0530510_0002579 Ga0530510_0002579_3667_4902 383
123 3300031665 Ga0316575_10011560 Ga0316575_100115603 384
124 3300036647 Ga0316582_0019193 Ga0316582_0019193_1525_2721 384
125 3300044673 Ga0453683_0000244 Ga0453683_0000244_68693_69886 385
126 3300049574 Ga0501038_0058278 Ga0501038_0058278_503_1738 385
127 3300006852 Ga0075433_10072604 Ga0075433_100726042 386
128 3300006871 Ga0075434_100067950 Ga0075434_1000679502 386
129 3300036712 Ga0316584_0007275 Ga0316584_0007275_3388_4713 386
130 3300006844 Ga0075428_100246696 Ga0075428_1002466961 387
131 3300026089 Ga0207648_10014115 Ga0207648_1001411510 387
132 3300036647 Ga0316582_0021621 Ga0316582_0021621_109_1305 387
133 3300037471 Ga0395905_0223325 Ga0395905_0223325_200_1453 387
134 3300037588 Ga0316581_0021033 Ga0316581_0021033_36_1232 387
135 3300005445 Ga0070708_100310574 Ga0070708_1003105742 388
136 3300036712 Ga0316584_0073169 Ga0316584_0073169_31_1302 388
137 3300036712 Ga0316584_0085413 Ga0316584_0085413_688_1959 388
138 3300049582 Ga0501048_0072994 Ga0501048_0072994_453_1775 388
139 3300049587 Ga0501071_0020959 Ga0501071_0020959_1670_2992 388
140 3300049588 Ga0501072_0078054 Ga0501072_0078054_1044_2366 388
141 3300005436 Ga0070713_100049288 Ga0070713_1000492884 389
142 3300006028 Ga0070717_10149482 Ga0070717_101494822 389
143 3300006844 Ga0075428_100000895 Ga0075428_1000008952 389
144 3300006880 Ga0075429_100010413 Ga0075429_1000104132 389
145 3300009094 Ga0111539_10259427 Ga0111539_102594272 389
146 3300009094 Ga0111539_10259626 Ga0111539_102596262 389
147 3300009147 Ga0114129_10019705 Ga0114129_100197053 389
148 3300009147 Ga0114129_10061956 Ga0114129_100619563 389
149 3300035724 Ga0373933_0046694 Ga0373933_0046694_106_1362 389
150 3300036401 Ga0373937_0074459 Ga0373937_0074459_1596_2852 389
151 3300050507 nmdc:mga05p37_48759_c1 nmdc:mga05p37_48759_c1_660_1883 389
152 3300050511 nmdc:mga08y16_226734_c1 nmdc:mga08y16_226734_c1_453_1700 389
153 3300031251 Ga0265327_10022092 Ga0265327_100220922 390
154 3300037471 Ga0395905_0151759 Ga0395905_0151759_720_2003 390
155 3300036401 Ga0373937_0096987 Ga0373937_0096987_1005_2258 391
156 3300005471 Ga0070698_100185650 Ga0070698_1001856502 392
157 3300045051 Ga0451576_0007024 Ga0451576_0007024_4733_5992 392
158 3300006844 Ga0075428_100217536 Ga0075428_1002175361 393
159 3300006846 Ga0075430_100047322 Ga0075430_1000473224 393
160 3300006847 Ga0075431_100069896 Ga0075431_1000698963 393
161 3300009147 Ga0114129_10145365 Ga0114129_101453653 393
162 3300031665 Ga0316575_10009121 Ga0316575_100091212 393
163 3300031691 Ga0316579_10016585 Ga0316579_100165854 393
164 3300031727 Ga0316576_10041869 Ga0316576_100418692 393
165 3300031728 Ga0316578_10041113 Ga0316578_100411132 393
166 3300031731 Ga0307405_10079164 Ga0307405_100791642 393
167 3300031733 Ga0316577_10007395 Ga0316577_100073952 393
168 3300031911 Ga0307412_10219865 Ga0307412_102198651 393
169 3300031995 Ga0307409_100043397 Ga0307409_1000433972 393
170 3300032002 Ga0307416_100023925 Ga0307416_1000239252 393
171 3300032004 Ga0307414_10099075 Ga0307414_100990752 393
172 3300032133 Ga0316583_10026930 Ga0316583_100269302 393
173 3300032137 Ga0316585_10027262 Ga0316585_100272622 393
174 3300032139 Ga0316580_10011924 Ga0316580_100119242 393
175 3300035398 Ga0316574_0017658 Ga0316574_0017658_2007_3296 393
176 3300035398 Ga0316574_0050781 Ga0316574_0050781_1112_2401 393
177 3300036712 Ga0316584_0119234 Ga0316584_0119234_673_1962 393
178 3300036712 Ga0316584_0164526 Ga0316584_0164526_181_1470 393
179 3300049572 Ga0501036_0026713 Ga0501036_0026713_3203_4438 393
180 3300049575 Ga0501039_0052921 Ga0501039_0052921_732_1967 393
181 3300049577 Ga0501041_0031690 Ga0501041_0031690_902_2137 393
182 3300049578 Ga0501042_0020355 Ga0501042_0020355_534_1769 393
183 3300049580 Ga0501046_0023428 Ga0501046_0023428_1608_2843 393
184 3300049582 Ga0501048_0028782 Ga0501048_0028782_1646_2881 393
185 3300049591 Ga0501075_0066964 Ga0501075_0066964_176_1411 393
186 3300049592 Ga0501076_0030409 Ga0501076_0030409_1199_2434 393
187 3300049741 Ga0501079_0023474 Ga0501079_0023474_2682_3917 393
188 3300049743 Ga0501081_0023106 Ga0501081_0023106_545_1780 393
189 3300050509 nmdc:mga0qj67_95842_c1 nmdc:mga0qj67_95842_c1_278_1513 393
190 3300061734 Ga0530510_0007192 Ga0530510_0007192_1847_3082 393
191 3300005518 Ga0070699_100156137 Ga0070699_1001561372 394
192 3300014325 Ga0163163_10006167 Ga0163163_1000616712 394
193 3300005329 Ga0070683_100086978 Ga0070683_1000869782 395
194 3300005548 Ga0070665_100223461 Ga0070665_1002234611 395
195 3300005577 Ga0068857_100034043 Ga0068857_1000340435 395
196 3300014325 Ga0163163_10154267 Ga0163163_101542672 395
197 3300025941 Ga0207711_10138908 Ga0207711_101389082 395
198 3300026116 Ga0207674_10068194 Ga0207674_100681944 395
199 3300048912 Ga0496109_0228227 Ga0496109_0228227_48_1286 395
200 3300048916 Ga0496113_0064536 Ga0496113_0064536_1456_2694 395
201 3300005458 Ga0070681_10345854 Ga0070681_103458541 397
202 3300006914 Ga0075436_100127986 Ga0075436_1001279862 397
203 3300006028 Ga0070717_10013690 Ga0070717_100136904 401
204 3300025949 Ga0207667_10046328 Ga0207667_100463283 401
205 3300032168 Ga0316593_10021074 Ga0316593_100210742 401
206 3300005435 Ga0070714_100001865 Ga0070714_1000018658 403
207 3300005436 Ga0070713_100006834 Ga0070713_1000068343 403
208 3300006028 Ga0070717_10056029 Ga0070717_100560293 403
209 3300025928 Ga0207700_10005089 Ga0207700_100050896 403
210 3300025929 Ga0207664_10000970 Ga0207664_1000097012 403
211 3300013105 Ga0157369_10011597 Ga0157369_100115971 405
212 3300026078 Ga0207702_10368411 Ga0207702_103684112 405
213 3300037853 Ga0436364_1536136 Ga0436364_1536136_5270_6592 405
214 3300049570 Ga0501033_0003167 Ga0501033_0003167_8125_9483 406
215 3300049571 Ga0501034_0014504 Ga0501034_0014504_4602_5960 406
216 3300049573 Ga0501037_0001811 Ga0501037_0001811_5310_6668 406
217 3300049574 Ga0501038_0002346 Ga0501038_0002346_4848_6206 406
218 3300049580 Ga0501046_0117239 Ga0501046_0117239_557_1915 406
219 3300049581 Ga0501047_0013656 Ga0501047_0013656_4101_5459 406
220 3300049584 Ga0501068_0054523 Ga0501068_0054523_899_2257 406
221 3300049589 Ga0501073_0005125 Ga0501073_0005125_174_1526 406
222 3300049590 Ga0501074_0007247 Ga0501074_0007247_5776_7134 406
223 3300060353 Ga0501082_0027730 Ga0501082_0027730_1587_2945 406
224 3300004799 Ga0058863_10042260 Ga0058863_100422602 407
225 3300005336 Ga0070680_100023570 Ga0070680_1000235705 407
226 3300005458 Ga0070681_10210716 Ga0070681_102107162 407
227 3300005530 Ga0070679_100150090 Ga0070679_1001500902 407
228 3300005563 Ga0068855_100252738 Ga0068855_1002527382 407
229 3300020077 Ga0206351_10156984 Ga0206351_101569842 407
230 3300020080 Ga0206350_10653391 Ga0206350_106533912 407
231 3300020082 Ga0206353_10407574 Ga0206353_104075742 407
232 3300020610 Ga0154015_1604696 Ga0154015_16046962 407
233 3300025913 Ga0207695_10140180 Ga0207695_101401802 407
234 3300059490 Ga0587066_007109 Ga0587066_007109_196_1419 407
235 3300059492 Ga0587073_0003105 Ga0587073_0003105_256_1479 407
236 3300059504 Ga0587082_007104 Ga0587082_007104_112_1335 407
237 3300059511 Ga0587091_004709 Ga0587091_004709_202_1425 407
238 3300059645 Ga0587076_002780 Ga0587076_002780_376_1599 407

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02353

CMAS

Mycolic acid cyclopropane synthetase

153

419

0.98

PF13649

Methyltransf_25

Methyltransferase domain

218

312

0.98

PF08241

Methyltransf_11

Methyltransferase domain

219

316

0.94

PF08242

Methyltransf_12

Methyltransferase domain

219

313

0.88

PF13847

Methyltransf_31

Methyltransferase domain

212

355

0.84

PF13489

Methyltransf_23

Methyltransferase domain

195

361

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1tpy-assembly1.cif.gz_A structure of the cyclopropane synthase mmaa2 from mycobacterium tuberculosis 0.9496 114 376
8t1a-assembly1.cif.gz_A crystal structure of s-adenosylmethionine-dependent methyltransferase umaa from mycobacterium tuberculosis (p32 twin) 0.9422 120 375
3hem-assembly1.cif.gz_A structure of mycobacterium tuberculosis mycolic acid cyclopropane synthase cmaa2 in complex with dioctylamine 0.9418 114 376
1l1e-assembly2.cif.gz_B crystal structure of mycolic acid cyclopropane synthase pcaa complexed with s-adenosyl-l-homocysteine 0.9398 120 375
8t1a-assembly2.cif.gz_B crystal structure of s-adenosylmethionine-dependent methyltransferase umaa from mycobacterium tuberculosis (p32 twin) 0.9369 122 375
ID Description Score Start End Superfamily
af_O69687_132_410_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9582 107 376 3.40.50.150
af_Q2QUD2_542_827_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9564 106 376 3.40.50.150
af_Q5APD4_189_477_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9524 107 376 3.40.50.150
3hemA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9418 114 376 3.40.50.150
1l1eB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9398 120 375 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A424YBL3-F1-model_v4 Class I SAM-dependent methyltransferase 0.9702 160 391 GO:0008168
GO:0008610
GO:0032259
AF-A0A0S6TGA2-F1-model_v4 deleted 0.9678 147 391
AF-A0A3B9UXI1-F1-model_v4 Cyclopropane-fatty-acyl-phospholipid synthase 0.9665 211 392
AF-A0A158KWH3-F1-model_v4 Cyclopropane-fatty-acyl-phospholipid synthase 0.9661 136 341 GO:0008168
GO:0008610
GO:0032259
AF-A0A432H5X4-F1-model_v4 Methyltransferase domain-containing protein 0.9612 156 230 GO:0009058
GO:0016740

Feature Viewer

pLDDT pTM Quality
86.55 0.86 High
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Predicted Structure (AlphaFold2)

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