F351065

General Info

Members Datasets Scaffolds Average Seq Length
238 200 192 1076

Family's Representative Sequence

Representative Sequence 3300028653|Ga0265323_10000025|Ga0265323_1000002514
Length 1138
Sequence MDPVGDWRHMHGRPAHEIDPTAAPISPKDSGSSVGGGILWKEDSFRAKLVTVNFAQWRALRLCLPTVPANAPISPPIPSGIRDNHHRGAVADFLRQQLKPGADLDLVTAYFTVFAYDKLRIHLDNLGRIRLLFGEAAFIKDLGPEKTDSAAYVLRDDGLALAGGLNQRHLAQACAKWMRDKVDVRSVTRTGFLHGKMSHIRRGEVTAAIVGSSNFTTRGLGLAATNNNVELNLIVSDDRDRDDLHRWFEELWNDGSRVEDVKARVLDYLLQVYRDQPPEFVYFKTLFELFHRFIEEGQSVDEALRQIRLPDTGIWKTLFEFQKDGARSAINKLKQLGGCILADSVGLGKTFEALAVIKYFELKNEKALVLCPKKLADNWLLYRQNSALNPFEKDRFRFDVLHHTDLSRESGWSNGIDIGPGFYWGNYDLVVIDESHNFRNNSVGPRGEDDQPVRRTRYERLINDVIKSGIRTKVLLLSATPVNNELADLRNQISFIAGGDVARDDPADAAFANNLGIRSLKTTTRDAQARFTAWTRLPPAQREKKNLIHVLGGDFLKLLDALTIARSRRHVTRHYKAEMARLGGFPVRTPPDTVYPEIDSTGKFPGYDVIAGQLGKYKLWLFQPAAHLKADLSAEMRKAYERRVGGFTQEGRERILTGMMRVSFLKRLESSVDSFRISLERTLAKIDRLEERMTRFERFRDENPDLDYDALTPDEVDDPELADALQVGQSARIKMAHLDLERWRGHLAEDRKQLTSLLEQAKPVTPDRDAKLEQLKQRIAAKVQAAPLDKDGRPNRKMLVFTAYADTARYLYDQLHAWARQSLGVHSSLVVGSGENESTFTLSRDFADLLVDFSPRSKHRAEARPGAGATEVDLLIASDCISEGQNLQDCDTVINYDIHWNPVRIIQRFGRIDRIGSRAREVHLVNFWPTPHLDRYINLKLRVEARMALVDLTATQTDNPLDLLNYLRAHEDDLRDAPFGLYAVVPPAADVPMARPGAIFCLRHKGGGAVAAENEKVNPLAPHYLVFIHADGQVRLAFTQVKTILNLFRELALGKTEPYTELCRLFDRQTEQGADMRAYTRLIGQALESITATFQQRLASGLQHGRQFVLPTVDDQPRPEAAFELVTWLVLLPPELQR

Samples

Sample ID Description Type Environment
1 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
2 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
3 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
4 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
5 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
6 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
7 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
8 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
9 2643221641 Nocardioides sp. Root122 Isolate Unclassified
10 2643221660 Methylibium sp. Root1272 Isolate Unclassified
11 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
12 2643221723 Ensifer sp. Root278 Isolate Unclassified
13 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
14 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
15 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
16 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
17 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
18 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
19 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
20 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
21 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
22 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
23 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
24 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
25 2919063839 Pseudomonas pharyngis 1098 Isolate Rhizosphere
26 2919150387 Rahnella aceris 1817 Isolate Unclassified
27 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
28 2927143783 Rahnella sp. 2050 Isolate Unclassified
29 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
30 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
31 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
32 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
33 2952252522 Salinicola sp. DM10 Isolate Unclassified
34 2958100919 Mesorhizobium sp. M2A.F.Ca.ET.015.02.1.1 Isolate Nodule
35 2958172287 Mesorhizobium sp. M2A.F.Ca.ET.029.05.1.1 Isolate Nodule
36 2979710463 Mesorhizobium sp. M2A.F.Ca.ET.017.03.2.1 Isolate Nodule
37 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
38 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
39 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
40 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
41 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
42 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
44 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
45 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
46 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
47 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
48 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
49 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
50 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
51 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
52 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
53 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
54 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
55 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
56 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
57 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
58 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
59 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
60 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
61 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
78 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
79 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
82 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
86 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
88 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
104 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
105 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
108 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
109 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
110 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
111 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
114 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
115 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
116 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
117 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
118 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
119 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
120 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
126 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
127 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
128 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
129 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
130 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
131 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
132 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
135 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
136 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
137 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
138 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
139 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
140 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
141 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
144 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
145 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
146 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
147 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
148 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
149 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
152 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
153 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
154 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
155 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
156 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
157 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
158 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
159 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
160 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
161 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
162 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
163 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
164 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
165 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
166 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
167 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
170 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
171 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
181 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
182 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
183 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
185 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
186 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
187 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
188 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
189 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
190 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
191 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
192 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
193 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
194 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
195 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
196 8005258706 Rhizobium sp. R693 Isolate Nodule
197 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
198 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
199 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere
200 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.67
Metatranscriptomes 0
Isolates 19.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.18
Nodule 3.36
Rhizoplane 1.26
Rhizosphere 67.65
Stem 0
Stem Tuber 0
Unclassified 15.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000999 3300002773 Bacteria 13702
2 JGI25151J46595_10001950 3300003187 Bacteria 13055
3 JGI25406J46586_10000017 3300003203 Bacteria 90811
4 rootH1_10002851 3300003316 Bacteria 77839
5 rootH1_10021921 3300003316 Bacteria 9393
6 rootL2_10009593 3300003322 Bacteria 33533
7 Ga0055533_1000517 3300003756 Bacteria 13959
8 Ga0055524_1000356 3300003775 Bacteria 41548
9 Ga0055531_10000040 3300003794 Bacteria 139402
10 Ga0055541_1000125 3300003841 Bacteria 50666
11 Ga0065165_1000650 3300005262 Bacteria 50148
12 Ga0065704_10074139 3300005289 Bacteria 6500
13 Ga0070683_100000455 3300005329 Bacteria 28597
14 Ga0070670_100000941 3300005331 Bacteria 22849
15 Ga0070707_100004166 3300005468 Bacteria 13549
16 Ga0070684_100000080 3300005535 Bacteria 63129
17 Ga0070665_100000895 3300005548 Bacteria 38320
18 Ga0068856_100000614 3300005614 Bacteria 39037
19 Ga0068856_100001337 3300005614 Bacteria 25951
20 Ga0068859_100000353 3300005617 Bacteria 45785
21 Ga0068860_100000614 3300005843 Bacteria 42236
22 Ga0068860_100006029 3300005843 Bacteria 12199
23 Ga0081539_10000053 3300005985 Bacteria 264549
24 Ga0075363_100000261 3300006048 Bacteria 15135
25 Ga0075366_10000624 3300006195 Bacteria 16634
26 Ga0097620_100000353 3300006931 Bacteria 45785
27 Ga0105240_10015426 3300009093 Bacteria 10388
28 Ga0105247_10000632 3300009101 Bacteria 28132
29 Ga0105242_10003125 3300009176 Bacteria 12919
30 Ga0105248_10000750 3300009177 Bacteria 36473
31 Ga0105237_10002895 3300009545 Bacteria 20816
32 Ga0105238_10002058 3300009551 Bacteria 20297
33 Ga0105238_10005490 3300009551 Bacteria 12524
34 Ga0105238_10010883 3300009551 Bacteria 9143
35 Ga0105239_10001939 3300010375 Bacteria 27002
36 Ga0157371_10003437 3300013102 Bacteria 14369
37 Ga0157370_10001752 3300013104 Bacteria 26736
38 Ga0157370_10005409 3300013104 Bacteria 14326
39 Ga0157374_10008292 3300013296 Bacteria 8864
40 Ga0157378_10000170 3300013297 Bacteria 62031
41 Ga0157372_10002251 3300013307 Bacteria 20936
42 Ga0157375_10017704 3300013308 Bacteria 6440
43 Ga0157380_10000005 3300014326 Bacteria 170403
44 Ga0182008_10000160 3300014497 Bacteria 52928
45 Ga0182007_10000973 3300015262 Bacteria 15729
46 Ga0182005_1000599 3300015265 Bacteria 17602
47 Ga0182005_1000804 3300015265 Bacteria 14275
48 Ga0163161_10006146 3300017792 Bacteria 8315
49 Ga0213872_10000503 3300021361 Bacteria 31139
50 Ga0209784_100162 3300025224 Bacteria 57991
51 Ga0209566_100099 3300025225 Bacteria 134195
52 Ga0209566_100225 3300025225 Bacteria 55718
53 Ga0209674_100182 3300025226 Bacteria 73560
54 Ga0209674_100774 3300025226 Bacteria 10833
55 Ga0209129_1000050 3300025258 Bacteria 267408
56 Ga0209565_1000678 3300025263 Bacteria 21266
57 Ga0209025_1001308 3300025294 Bacteria 33994
58 Ga0209256_1000142 3300025299 Bacteria 152245
59 Ga0209257_1000004 3300025304 Bacteria 1678347
60 Ga0209257_1000561 3300025304 Bacteria 63214
61 Ga0207710_10000044 3300025900 Bacteria 211820
62 Ga0207707_10041865 3300025912 Bacteria 4000
63 Ga0207671_10001700 3300025914 Bacteria 24891
64 Ga0207652_10009328 3300025921 Bacteria 7891
65 Ga0207646_10009052 3300025922 Bacteria 9887
66 Ga0207694_10002717 3300025924 Bacteria 14315
67 Ga0207694_10003626 3300025924 Bacteria 12222
68 Ga0207650_10021170 3300025925 Unclassified 4597
69 Ga0207686_10000631 3300025934 Bacteria 21863
70 Ga0207711_10000238 3300025941 Bacteria 59004
71 Ga0207661_10000005 3300025944 Bacteria 557888
72 Ga0207702_10001275 3300026078 Bacteria 25290
73 Ga0207702_10002634 3300026078 Bacteria 16849
74 Ga0268266_10000321 3300028379 Bacteria 75565
75 Ga0268264_10000307 3300028381 Bacteria 78736
76 Ga0268264_10004994 3300028381 Bacteria 11229
77 Ga0265337_1000175 3300028556 Bacteria 33642
78 Ga0265323_10000025 3300028653 Bacteria 82188
79 Ga0265322_10003493 3300028654 Bacteria 4740
80 Ga0265338_10003181 3300028800 Bacteria 23427
81 Ga0265338_10006071 3300028800 Bacteria 15517
82 Ga0307511_10000129 3300030521 Bacteria 68792
83 Ga0265320_10000037 3300031240 Bacteria 135828
84 Ga0265325_10000417 3300031241 Bacteria 30411
85 Ga0265339_10002882 3300031249 Bacteria 12170
86 Ga0265331_10000528 3300031250 Bacteria 35195
87 Ga0265327_10000894 3300031251 Bacteria 43989
88 Ga0265327_10004493 3300031251 Bacteria 12320
89 Ga0265316_10002041 3300031344 Bacteria 21260
90 Ga0307509_10037722 3300031507 Bacteria 5280
91 Ga0307408_100000092 3300031548 Bacteria 98953
92 Ga0307408_100003534 3300031548 Bacteria 10638
93 Ga0265313_10001497 3300031595 Bacteria 21780
94 Ga0307508_10012179 3300031616 Bacteria 7866
95 Ga0265314_10001738 3300031711 Bacteria 23578
96 Ga0265314_10002195 3300031711 Bacteria 20385
97 Ga0265342_10007663 3300031712 Bacteria 7862
98 Ga0395899_0001223 3300037312 Bacteria 22492
99 Ga0395900_0002213 3300037418 Bacteria 21717
100 Ga0395898_0001882 3300037466 Bacteria 26783
101 Ga0395901_0001601 3300038443 Bacteria 23439
102 Ga0436365_0153842 3300039437 Bacteria 46672
103 Ga0436361_0156542 3300039447 Bacteria 30332
104 Ga0436361_0202129 3300039447 Bacteria 39168
105 Ga0439438_000870 3300041405 Bacteria 13500
106 Ga0439432_000018 3300042006 Bacteria 61583
107 Ga0439451_000174 3300042009 Bacteria 12123
108 Ga0439452_003036 3300042010 Bacteria 5975
109 Ga0451577_0004678 3300042876 Bacteria 14360
110 Ga0451577_0007736 3300042876 Bacteria 10534
111 Ga0451577_0021421 3300042876 Bacteria 5916
112 Ga0453683_0003604 3300044673 Bacteria 11365
113 Ga0453683_0021527 3300044673 Bacteria 4116
114 Ga0453684_0000004 3300044712 Bacteria 1469893
115 Ga0453684_0000406 3300044712 Bacteria 177405
116 Ga0453684_0001231 3300044712 Bacteria 78277
117 Ga0453684_0001616 3300044712 Bacteria 61709
118 Ga0453684_0005870 3300044712 Bacteria 23855
119 Ga0453684_0044275 3300044712 Bacteria 5960
120 Ga0451576_0000826 3300045051 Bacteria 60376
121 Ga0495629_0000406 3300046459 Bacteria 36055
122 Ga0495650_0000486 3300046471 Bacteria 60515
123 Ga0495605_0000106 3300046474 Bacteria 105494
124 Ga0495584_0000222 3300046491 Bacteria 41020
125 Ga0495585_0003920 3300046492 Bacteria 9853
126 Ga0495596_0002274 3300046500 Bacteria 10447
127 Ga0495583_0003421 3300046506 Bacteria 12099
128 Ga0495606_0001563 3300046507 Bacteria 30055
129 Ga0495628_0000630 3300046516 Bacteria 32207
130 Ga0495632_0001709 3300046519 Bacteria 17846
131 Ga0495666_0000498 3300046526 Bacteria 17463
132 Ga0495654_0000187 3300046530 Bacteria 60908
133 Ga0495665_0003818 3300046531 Bacteria 8151
134 Ga0495609_0000238 3300046538 Bacteria 52336
135 Ga0495597_0000151 3300046542 Bacteria 61673
136 Ga0495597_0002087 3300046542 Bacteria 13310
137 Ga0495611_0001574 3300046648 Bacteria 11176
138 Ga0495625_0006281 3300046660 Bacteria 10627
139 Ga0495661_0000044 3300046665 Bacteria 148721
140 Ga0495588_0001072 3300046674 Bacteria 11836
141 Ga0495669_0000272 3300046684 Bacteria 29530
142 Ga0495670_0000750 3300046691 Bacteria 15551
143 Ga0495671_0003199 3300046692 Bacteria 10174
144 Ga0495660_0001284 3300046810 Bacteria 17423
145 Ga0495672_0000969 3300047320 Bacteria 29817
146 Ga0495672_0003665 3300047320 Bacteria 12990
147 Ga0495676_0000334 3300047321 Bacteria 38217
148 Ga0495687_000112 3300047443 Bacteria 124725
149 Ga0495687_000859 3300047443 Bacteria 32277
150 Ga0495675_0001220 3300047444 Bacteria 15577
151 Ga0495681_0004276 3300047470 Bacteria 9788
152 Ga0495681_0014246 3300047470 Bacteria 4570
153 Ga0496104_0000824 3300048907 Bacteria 26718
154 Ga0496105_0000078 3300048908 Bacteria 74087
155 Ga0496117_0000147 3300048920 Bacteria 149471
156 Ga0496117_0003490 3300048920 Bacteria 18235
157 Ga0496118_0000453 3300048921 Bacteria 67931
158 Ga0496118_0003285 3300048921 Bacteria 20575
159 Ga0496119_0003020 3300048922 Bacteria 17816
160 Ga0496122_0009479 3300048925 Bacteria 10250
161 Ga0496124_0003905 3300048927 Bacteria 17817
162 Ga0496125_0000178 3300048928 Bacteria 139900
163 Ga0496126_0001780 3300048929 Bacteria 31816
164 Ga0496126_0002038 3300048929 Bacteria 28446
165 Ga0501031_0000005 3300049568 Bacteria 183960
166 Ga0501032_0000049 3300049569 Bacteria 105967
167 Ga0501033_0000129 3300049570 Bacteria 73102
168 Ga0501034_0000560 3300049571 Bacteria 58880
169 Ga0501034_0005712 3300049571 Bacteria 13525
170 Ga0501036_0000014 3300049572 Bacteria 148705
171 Ga0501037_0000042 3300049573 Bacteria 118407
172 Ga0501038_0000024 3300049574 Bacteria 148705
173 Ga0501038_0003787 3300049574 Bacteria 14076
174 Ga0501039_0000052 3300049575 Bacteria 95038
175 Ga0501047_0000410 3300049581 Bacteria 47994
176 Ga0501067_0000298 3300049583 Bacteria 27228
177 Ga0501080_0017200 3300049742 Bacteria 6680
178 Ga0501083_0005147 3300049744 Bacteria 9257
179 Ga0501035_0000045 3300049822 Bacteria 148705
180 Ga0501044_0000035 3300049823 Bacteria 162042
181 Ga0501044_0000044 3300049823 Bacteria 148705
182 Ga0501044_0001362 3300049823 Bacteria 28651
183 Ga0501044_0027501 3300049823 Bacteria 6009
184 nmdc:mga03n38_39_c1 3300050490 Bacteria 28261
185 nmdc:mga0k408_798_c1 3300050493 Bacteria 17364
186 Ga0500578_0019677 3300053086 Bacteria 4334
187 Ga0500566_0012642 3300053094 Bacteria 4967
188 Ga0500555_000004 3300053103 Bacteria 343705
189 Ga0500614_001001 3300053123 Bacteria 7009
190 Ga0500559_0000013 3300053136 Bacteria 163436
191 Ga0500568_0002363 3300053139 Bacteria 11168
192 Ga0500636_0013041 3300053177 Bacteria 4879

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2979710463 2979715535 867
2 3300053123 Ga0500614_001001 Ga0500614_001001_4241_6988 891
3 3300031240 Ga0265320_10000037 Ga0265320_1000003754 909
4 iso_pu_bacteria 2585427633 2585996467 913
5 iso_pu_bacteria 2958100919 2958104796 921
6 iso_pu_bacteria 2643221622 2644125647 935
7 3300031548 Ga0307408_100000092 Ga0307408_10000009223 941
8 3300044673 Ga0453683_0003604 Ga0453683_0003604_1256_4285 952
9 3300013104 Ga0157370_10001752 Ga0157370_100017521 955
10 3300025258 Ga0209129_1000050 Ga0209129_1000050134 955
11 3300049742 Ga0501080_0017200 Ga0501080_0017200_2328_5483 964
12 3300049744 Ga0501083_0005147 Ga0501083_0005147_3005_6160 964
13 iso_pu_bacteria 8016613128 8016622192 965
14 3300028653 Ga0265323_10000025 Ga0265323_1000002514 986
15 3300028654 Ga0265322_10003493 Ga0265322_100034932 986
16 3300031344 Ga0265316_10002041 Ga0265316_1000204110 986
17 3300031712 Ga0265342_10007663 Ga0265342_100076634 986
18 3300053139 Ga0500568_0002363 Ga0500568_0002363_3674_6850 991
19 3300005985 Ga0081539_10000053 Ga0081539_10000053109 997
20 3300046459 Ga0495629_0000406 Ga0495629_0000406_14674_17850 1004
21 iso_pu_bacteria 2958172287 2958177591 1004
22 iso_pu_bacteria 2928090899 2928091525 1005
23 3300005468 Ga0070707_100004166 Ga0070707_1000041664 1007
24 3300025922 Ga0207646_10009052 Ga0207646_100090523 1007
25 3300009176 Ga0105242_10003125 Ga0105242_100031257 1011
26 3300013307 Ga0157372_10002251 Ga0157372_1000225111 1011
27 3300025934 Ga0207686_10000631 Ga0207686_100006317 1011
28 iso_pu_bacteria 8056579771 8056582796 1011
29 iso_pu_bacteria 2858888857 2858894136 1015
30 iso_pu_bacteria 2862507626 2862507871 1015
31 iso_pu_bacteria 2997600082 2997602872 1015
32 3300030521 Ga0307511_10000129 Ga0307511_1000012934 1016
33 3300009551 Ga0105238_10010883 Ga0105238_100108832 1018
34 3300042009 Ga0439451_000174 Ga0439451_000174_2571_5876 1018
35 3300005262 Ga0065165_1000650 Ga0065165_100065025 1020
36 3300031251 Ga0265327_10000894 Ga0265327_100008944 1021
37 3300046516 Ga0495628_0000630 Ga0495628_0000630_2061_5177 1021
38 3300003316 rootH1_10002851 rootH1_1000285149 1022
39 3300039437 Ga0436365_0153842 Ga0436365_0153842_31906_35235 1022
40 3300003203 JGI25406J46586_10000017 JGI25406J46586_1000001766 1024
41 3300005331 Ga0070670_100000941 Ga0070670_1000009417 1024
42 3300025925 Ga0207650_10021170 Ga0207650_100211702 1024
43 iso_pu_bacteria 2989349275 2989349849 1024
44 3300013296 Ga0157374_10008292 Ga0157374_100082923 1027
45 3300013297 Ga0157378_10000170 Ga0157378_1000017035 1027
46 3300013308 Ga0157375_10017704 Ga0157375_100177043 1027
47 3300025263 Ga0209565_1000678 Ga0209565_10006784 1027
48 3300044712 Ga0453684_0044275 Ga0453684_0044275_1684_5010 1027
49 3300053177 Ga0500636_0013041 Ga0500636_0013041_1192_4347 1027
50 iso_pu_bacteria 2928526807 2928528287 1027
51 3300005614 Ga0068856_100000614 Ga0068856_10000061411 1028
52 3300026078 Ga0207702_10002634 Ga0207702_1000263414 1028
53 3300028800 Ga0265338_10006071 Ga0265338_100060713 1028
54 3300031241 Ga0265325_10000417 Ga0265325_100004178 1028
55 3300031249 Ga0265339_10002882 Ga0265339_100028828 1028
56 3300031250 Ga0265331_10000528 Ga0265331_1000052812 1028
57 3300031251 Ga0265327_10004493 Ga0265327_100044934 1028
58 3300031595 Ga0265313_10001497 Ga0265313_100014979 1028
59 3300031711 Ga0265314_10002195 Ga0265314_100021953 1028
60 3300042876 Ga0451577_0004678 Ga0451577_0004678_7213_10551 1029
61 3300044712 Ga0453684_0000004 Ga0453684_0000004_1239159_1242497 1029
62 3300044712 Ga0453684_0001231 Ga0453684_0001231_73379_76570 1029
63 3300047443 Ga0495687_000859 Ga0495687_000859_1258_4452 1030
64 3300053103 Ga0500555_000004 Ga0500555_000004_327847_331218 1030
65 3300017792 Ga0163161_10006146 Ga0163161_100061464 1031
66 3300037312 Ga0395899_0001223 Ga0395899_0001223_9688_12927 1031
67 3300037418 Ga0395900_0002213 Ga0395900_0002213_9900_13139 1031
68 3300038443 Ga0395901_0001601 Ga0395901_0001601_9710_12949 1031
69 iso_pu_bacteria 2893066018 2893067716 1031
70 3300042876 Ga0451577_0021421 Ga0451577_0021421_1550_4906 1032
71 3300045051 Ga0451576_0000826 Ga0451576_0000826_44249_47452 1033
72 3300046492 Ga0495585_0003920 Ga0495585_0003920_4907_8212 1033
73 iso_pu_bacteria 2864997549 2864998287 1033
74 iso_pu_bacteria 651053060 651174158 1033
75 3300014326 Ga0157380_10000005 Ga0157380_1000000567 1034
76 3300039447 Ga0436361_0202129 Ga0436361_0202129_20488_23766 1034
77 3300049581 Ga0501047_0000410 Ga0501047_0000410_37474_40848 1034
78 iso_pu_bacteria 2904474040 2904477055 1034
79 iso_pu_bacteria 2919150387 2919153222 1034
80 iso_pu_bacteria 2927143783 2927143848 1034
81 3300005617 Ga0068859_100000353 Ga0068859_10000035328 1035
82 3300005843 Ga0068860_100000614 Ga0068860_1000006149 1035
83 3300006931 Ga0097620_100000353 Ga0097620_10000035328 1035
84 3300028381 Ga0268264_10000307 Ga0268264_1000030728 1035
85 3300046526 Ga0495666_0000498 Ga0495666_0000498_5007_8288 1035
86 3300046531 Ga0495665_0003818 Ga0495665_0003818_3758_7039 1035
87 3300046648 Ga0495611_0001574 Ga0495611_0001574_3110_6400 1035
88 3300046684 Ga0495669_0000272 Ga0495669_0000272_3941_7228 1035
89 iso_pu_bacteria 2510917026 2511170644 1035
90 iso_pu_bacteria 2565956521 2566037015 1035
91 iso_pu_bacteria 2599185236 2599718834 1035
92 iso_pu_bacteria 2643221641 2644228669 1035
93 iso_pu_bacteria 2786546548 2787505850 1035
94 iso_pu_bacteria 2882632389 2882638599 1035
95 iso_pu_bacteria 2920760137 2920763294 1035
96 iso_pu_bacteria 2935890801 2935893330 1035
97 iso_pu_bacteria 3000405567 3000407970 1035
98 iso_pu_bacteria 8005258706 8005263510 1035
99 3300053086 Ga0500578_0019677 Ga0500578_0019677_444_3707 1036
100 iso_pu_bacteria 2643221697 2644537195 1036
101 iso_pu_bacteria 2739367664 2739652503 1036
102 iso_pu_bacteria 2739367865 2740030976 1036
103 iso_pu_bacteria 641736154 642414791 1036
104 3300025225 Ga0209566_100099 Ga0209566_10009960 1037
105 3300049571 Ga0501034_0005712 Ga0501034_0005712_3538_6804 1037
106 3300009101 Ga0105247_10000632 Ga0105247_1000063219 1038
107 3300025900 Ga0207710_10000044 Ga0207710_1000004414 1038
108 iso_pu_bacteria 2952252522 2952254504 1038
109 3300003794 Ga0055531_10000040 Ga0055531_1000004080 1039
110 3300005329 Ga0070683_100000455 Ga0070683_10000045511 1039
111 3300005535 Ga0070684_100000080 Ga0070684_1000000805 1039
112 3300005614 Ga0068856_100001337 Ga0068856_1000013375 1039
113 3300006048 Ga0075363_100000261 Ga0075363_1000002618 1039
114 3300009093 Ga0105240_10015426 Ga0105240_100154265 1039
115 3300009545 Ga0105237_10002895 Ga0105237_100028954 1039
116 3300009551 Ga0105238_10005490 Ga0105238_100054904 1039
117 3300010375 Ga0105239_10001939 Ga0105239_100019398 1039
118 3300025304 Ga0209257_1000004 Ga0209257_1000004170 1039
119 3300025304 Ga0209257_1000561 Ga0209257_100056110 1039
120 3300025914 Ga0207671_10001700 Ga0207671_1000170010 1039
121 3300025924 Ga0207694_10003626 Ga0207694_100036264 1039
122 3300025944 Ga0207661_10000005 Ga0207661_100000055 1039
123 3300026078 Ga0207702_10001275 Ga0207702_1000127512 1039
124 3300028800 Ga0265338_10003181 Ga0265338_1000318116 1039
125 3300031507 Ga0307509_10037722 Ga0307509_100377222 1039
126 3300037466 Ga0395898_0001882 Ga0395898_0001882_14507_17776 1039
127 3300041405 Ga0439438_000870 Ga0439438_000870_8613_11894 1039
128 3300044673 Ga0453683_0021527 Ga0453683_0021527_62_3268 1039
129 3300044712 Ga0453684_0000406 Ga0453684_0000406_104641_107913 1039
130 3300047444 Ga0495675_0001220 Ga0495675_0001220_6062_9385 1039
131 3300048907 Ga0496104_0000824 Ga0496104_0000824_16922_20194 1039
132 3300048908 Ga0496105_0000078 Ga0496105_0000078_16972_20244 1039
133 3300048920 Ga0496117_0003490 Ga0496117_0003490_9218_12511 1039
134 3300048921 Ga0496118_0003285 Ga0496118_0003285_5725_9018 1039
135 3300048922 Ga0496119_0003020 Ga0496119_0003020_8798_12091 1039
136 3300048927 Ga0496124_0003905 Ga0496124_0003905_8799_12092 1039
137 3300049568 Ga0501031_0000005 Ga0501031_0000005_93644_96916 1039
138 3300049569 Ga0501032_0000049 Ga0501032_0000049_59103_62375 1039
139 3300049570 Ga0501033_0000129 Ga0501033_0000129_15899_19171 1039
140 3300049571 Ga0501034_0000560 Ga0501034_0000560_39461_42733 1039
141 3300049572 Ga0501036_0000014 Ga0501036_0000014_86331_89603 1039
142 3300049573 Ga0501037_0000042 Ga0501037_0000042_56033_59305 1039
143 3300049574 Ga0501038_0000024 Ga0501038_0000024_86331_89603 1039
144 3300049575 Ga0501039_0000052 Ga0501039_0000052_32664_35936 1039
145 3300049822 Ga0501035_0000045 Ga0501035_0000045_59103_62375 1039
146 3300049823 Ga0501044_0000044 Ga0501044_0000044_86331_89603 1039
147 3300050490 nmdc:mga03n38_39_c1 nmdc:mga03n38_39_c1_10371_13643 1039
148 3300003756 Ga0055533_1000517 Ga0055533_10005174 1040
149 3300005289 Ga0065704_10074139 Ga0065704_100741392 1040
150 3300009551 Ga0105238_10002058 Ga0105238_1000205810 1040
151 3300015262 Ga0182007_10000973 Ga0182007_100009731 1040
152 3300015265 Ga0182005_1000804 Ga0182005_10008045 1040
153 3300025226 Ga0209674_100182 Ga0209674_10018215 1040
154 3300025924 Ga0207694_10002717 Ga0207694_100027174 1040
155 3300031548 Ga0307408_100003534 Ga0307408_1000035345 1040
156 3300042006 Ga0439432_000018 Ga0439432_000018_10920_14219 1040
157 3300046471 Ga0495650_0000486 Ga0495650_0000486_52108_55407 1040
158 3300046491 Ga0495584_0000222 Ga0495584_0000222_9658_12957 1040
159 3300046519 Ga0495632_0001709 Ga0495632_0001709_14443_17742 1040
160 3300046530 Ga0495654_0000187 Ga0495654_0000187_53233_56532 1040
161 3300046542 Ga0495597_0000151 Ga0495597_0000151_4740_8039 1040
162 3300046542 Ga0495597_0002087 Ga0495597_0002087_9506_12796 1040
163 3300046665 Ga0495661_0000044 Ga0495661_0000044_63431_66730 1040
164 3300046691 Ga0495670_0000750 Ga0495670_0000750_9225_12515 1040
165 3300046810 Ga0495660_0001284 Ga0495660_0001284_5177_8476 1040
166 3300047320 Ga0495672_0000969 Ga0495672_0000969_17918_21208 1040
167 3300047320 Ga0495672_0003665 Ga0495672_0003665_3101_6400 1040
168 3300047470 Ga0495681_0004276 Ga0495681_0004276_2372_5671 1040
169 3300048920 Ga0496117_0000147 Ga0496117_0000147_77036_80326 1040
170 3300048921 Ga0496118_0000453 Ga0496118_0000453_20005_23295 1040
171 3300048929 Ga0496126_0001780 Ga0496126_0001780_26202_29486 1040
172 3300048929 Ga0496126_0002038 Ga0496126_0002038_9376_12651 1040
173 3300031616 Ga0307508_10012179 Ga0307508_100121795 1042
174 3300046660 Ga0495625_0006281 Ga0495625_0006281_5546_8791 1044
175 3300046674 Ga0495588_0001072 Ga0495588_0001072_7593_10838 1044
176 3300047470 Ga0495681_0014246 Ga0495681_0014246_242_3487 1044
177 3300031711 Ga0265314_10001738 Ga0265314_1000173810 1046
178 3300046538 Ga0495609_0000238 Ga0495609_0000238_47485_50682 1046
179 3300049574 Ga0501038_0003787 Ga0501038_0003787_2030_5224 1046
180 iso_pu_bacteria 2919063839 2919067549 1046
181 3300042876 Ga0451577_0007736 Ga0451577_0007736_988_4182 1047
182 3300049583 Ga0501067_0000298 Ga0501067_0000298_4752_7949 1048
183 iso_pu_bacteria 2740891818 2740993533 1048
184 3300005843 Ga0068860_100006029 Ga0068860_1000060291 1049
185 3300028381 Ga0268264_10004994 Ga0268264_100049941 1049
186 3300042010 Ga0439452_003036 Ga0439452_003036_1970_5158 1049
187 3300046474 Ga0495605_0000106 Ga0495605_0000106_91903_95091 1049
188 3300049823 Ga0501044_0027501 Ga0501044_0027501_1509_4694 1049
189 iso_pu_bacteria 2588253510 2588291801 1049
190 iso_pu_bacteria 2643221660 2644337709 1049
191 iso_pu_bacteria 2928115317 2928118275 1049
192 iso_pu_bacteria 8055225921 8055227489 1049
193 3300013104 Ga0157370_10005409 Ga0157370_100054092 1050
194 3300044712 Ga0453684_0005870 Ga0453684_0005870_20031_23225 1050
195 3300047321 Ga0495676_0000334 Ga0495676_0000334_11748_14993 1050
196 3300048928 Ga0496125_0000178 Ga0496125_0000178_118729_121938 1050
197 3300006195 Ga0075366_10000624 Ga0075366_1000062410 1051
198 3300025912 Ga0207707_10041865 Ga0207707_100418652 1051
199 3300025921 Ga0207652_10009328 Ga0207652_100093282 1051
200 3300050493 nmdc:mga0k408_798_c1 nmdc:mga0k408_798_c1_1871_5074 1051
201 3300013102 Ga0157371_10003437 Ga0157371_100034374 1052
202 3300015265 Ga0182005_1000599 Ga0182005_100059914 1052
203 3300046500 Ga0495596_0002274 Ga0495596_0002274_6173_9397 1052
204 3300046506 Ga0495583_0003421 Ga0495583_0003421_7959_11156 1052
205 3300046507 Ga0495606_0001563 Ga0495606_0001563_13143_16337 1052
206 3300046692 Ga0495671_0003199 Ga0495671_0003199_6125_9349 1052
207 3300047443 Ga0495687_000112 Ga0495687_000112_79524_82718 1052
208 3300003316 rootH1_10021921 rootH1_100219215 1053
209 3300003322 rootL2_10009593 rootL2_100095934 1053
210 3300003775 Ga0055524_1000356 Ga0055524_100035627 1053
211 3300003841 Ga0055541_1000125 Ga0055541_100012534 1053
212 3300009177 Ga0105248_10000750 Ga0105248_1000075031 1053
213 3300014497 Ga0182008_10000160 Ga0182008_1000016040 1053
214 3300021361 Ga0213872_10000503 Ga0213872_1000050313 1053
215 3300025224 Ga0209784_100162 Ga0209784_10016219 1053
216 3300025225 Ga0209566_100225 Ga0209566_10022531 1053
217 3300025226 Ga0209674_100774 Ga0209674_1007742 1053
218 3300025299 Ga0209256_1000142 Ga0209256_100014286 1053
219 3300025941 Ga0207711_10000238 Ga0207711_1000023811 1053
220 3300039447 Ga0436361_0156542 Ga0436361_0156542_18815_22042 1053
221 3300048925 Ga0496122_0009479 Ga0496122_0009479_312_3548 1053
222 3300053136 Ga0500559_0000013 Ga0500559_0000013_135216_138488 1053
223 iso_pu_bacteria 2775507255 2778126589 1053
224 3300005548 Ga0070665_100000895 Ga0070665_10000089518 1055
225 3300028379 Ga0268266_10000321 Ga0268266_1000032159 1055
226 3300049823 Ga0501044_0000035 Ga0501044_0000035_151540_154785 1055
227 3300044712 Ga0453684_0001616 Ga0453684_0001616_38534_41746 1056
228 3300028556 Ga0265337_1000175 Ga0265337_100017531 1057
229 iso_pu_bacteria 2558860242 2559296159 1057
230 iso_pu_bacteria 2582581294 2585200407 1057
231 iso_pu_bacteria 2643221723 2644672231 1057
232 iso_pu_bacteria 2856320880 2856322465 1057
233 iso_pu_bacteria 8016603502 8016611603 1057
234 3300049823 Ga0501044_0001362 Ga0501044_0001362_18841_22053 1058
235 3300053094 Ga0500566_0012642 Ga0500566_0012642_1680_4892 1058
236 3300002773 JGI25152J39213_1000999 JGI25152J39213_10009994 1061
237 3300003187 JGI25151J46595_10001950 JGI25151J46595_100019502 1061
238 3300025294 Ga0209025_1001308 Ga0209025_100130819 1061

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00176

SNF2-rel_dom

SNF2-related domain

176

394

0.88

PF13091

PLDc_2

PLD-like domain

94

252

0.76

PF00271

Helicase_C

Helicase conserved C-terminal domain

771

916

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
5jxt-assembly1.cif.gz_O crystal structure of mtiswi bound with histone h4 tail 0.7001 647 826
4crw-assembly1.cif.gz_B complex of human ddx6 (reca-c) and cnot1 (mif4g) 0.692 650 818
6s8r-assembly1.cif.gz_A d. melanogaster rna helicase me31b in complex with gigyf 0.6873 650 822
2hjv-assembly2.cif.gz_B structure of the second domain (residues 207-368) of the bacillus subtilis yxin protein 0.6801 650 819
1fuu-assembly1.cif.gz_B yeast initiation factor 4a 0.6799 650 816
ID Description Score Start End Superfamily
af_Q8IBA2_371_543_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7586 650 821 3.40.50.300
af_K7M6B0_421_558_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7585 650 803 3.40.50.300
af_O96264_365_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7519 650 818 3.40.50.300
af_P33919_186_374_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7476 631 800 3.40.50.300
af_F1MAM8_273_438_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7453 650 819 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2G6HNP1-F1-model_v4 Helicase 0.9558 4 161 GO:0004386
AF-A0A3B9Q2K1-F1-model_v4 Helicase 0.9487 237 448 GO:0004386
GO:0005524
GO:0006281
GO:0031297
AF-A0A3M0Y281-F1-model_v4 Helicase 0.9453 198 778 GO:0003677
GO:0004386
GO:0005524
GO:0006281
GO:0016787
GO:0031297
AF-A0A7X1PGB1-F1-model_v4 Helicase 0.9408 1 147 GO:0004386
AF-A0A1V6E8B7-F1-model_v4 ATP-dependent helicase HepA 0.934 1 1061 GO:0003677
GO:0004386
GO:0005524
GO:0006281
GO:0016787
GO:0031297

Feature Viewer

pLDDT pTM Quality
80.77 0.74 High
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Predicted Structure (AlphaFold2)

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