F350726

General Info

Members Datasets Scaffolds Average Seq Length
238 159 236 320

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100051616|Ga0070708_1000516162
Length 347
Sequence MPRPSHPATPARESSVGPAEAVPRTATHSYPRLVGDIGGTHARFARQRSPEAPLQDVAVYDCADFPSLQAVLRRYLDEHAGGQAHWAAIGIANPITGDEIRMTNLSWSFSIAQLQRELGFEQLLVINDFSALALSLPALDASQLRQVGPGTRVPGAPRALLGPGTGLGVSGLVPEADGNEVPLSGEGGHVTLSAADXXXAAVIALLQHRFGHASAERALSGPGLVNLYQALCRLHHVHIDLSLDAAAITHAGLEGECAQCAAAIEMFCSLLGTVAGNLALTLGARGGVYIGGGIVPRLGAALDRSRFRERFEAKGRFAGYLHSIPSYVIDAETSPALLGAARALDLA

Samples

Sample ID Description Type Environment
1 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
2 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
55 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
56 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
89 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
90 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
91 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
92 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
93 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
94 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
95 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
96 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
99 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
104 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
105 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
106 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
107 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
108 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
109 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
110 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
117 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
118 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
119 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
120 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
121 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
122 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
123 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
124 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
125 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
126 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
129 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
130 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
131 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
132 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
133 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
134 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
144 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
145 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
146 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
149 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
150 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
151 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
152 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
153 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
154 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
155 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
156 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
157 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
158 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
159 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.16
Metatranscriptomes 0
Isolates 0.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.87
Nodule 0
Rhizoplane 1.26
Rhizosphere 67.23
Stem 0
Stem Tuber 0
Unclassified 17.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10055252 3300003316 Bacteria 1798
2 rootL2_10072086 3300003322 Bacteria 1487
3 Ga0070658_10111934 3300005327 Bacteria 2262
4 Ga0070658_10245428 3300005327 Bacteria 1519
5 Ga0070676_10003295 3300005328 Bacteria 8394
6 Ga0070670_100075313 3300005331 Bacteria 2900
7 Ga0070670_100220597 3300005331 Bacteria 1649
8 Ga0070677_10053883 3300005333 Bacteria 1637
9 Ga0068869_100038065 3300005334 Bacteria 3425
10 Ga0070666_10136196 3300005335 Bacteria 1709
11 Ga0068868_100009361 3300005338 Bacteria 7042
12 Ga0070661_100003240 3300005344 Bacteria 11215
13 Ga0070668_100297395 3300005347 Bacteria 1353
14 Ga0070675_100014509 3300005354 Bacteria 6214
15 Ga0070671_100068499 3300005355 Bacteria 2960
16 Ga0070671_100079313 3300005355 Bacteria 2744
17 Ga0070673_100007049 3300005364 Bacteria 7372
18 Ga0070673_100164161 3300005364 Bacteria 1891
19 Ga0070659_100001277 3300005366 Bacteria 18247
20 Ga0070667_100021521 3300005367 Bacteria 5353
21 Ga0070667_100274243 3300005367 Bacteria 1513
22 Ga0070708_100051616 3300005445 Bacteria 3644
23 Ga0070663_100000536 3300005455 Bacteria 20125
24 Ga0070678_100146818 3300005456 Bacteria 1894
25 Ga0070662_100038369 3300005457 Bacteria 3402
26 Ga0070662_100050991 3300005457 Bacteria 2987
27 Ga0068867_100004165 3300005459 Bacteria 10173
28 Ga0068867_100222794 3300005459 Bacteria 1521
29 Ga0070706_100051258 3300005467 Bacteria 3809
30 Ga0068853_100011494 3300005539 Bacteria 7196
31 Ga0070672_100084203 3300005543 Bacteria 2553
32 Ga0070665_100071428 3300005548 Bacteria 3477
33 Ga0068855_100278148 3300005563 Bacteria 1860
34 Ga0070664_100034870 3300005564 Bacteria 4222
35 Ga0070664_100043375 3300005564 Bacteria 3795
36 Ga0068857_100027081 3300005577 Bacteria 5056
37 Ga0068857_100028063 3300005577 Bacteria 4965
38 Ga0068854_100133385 3300005578 Bacteria 1899
39 Ga0068854_100269460 3300005578 Bacteria 1366
40 Ga0068864_100097895 3300005618 Bacteria 2597
41 Ga0068863_100103300 3300005841 Bacteria 2710
42 Ga0068860_100110364 3300005843 Bacteria 2629
43 Ga0068860_100212124 3300005843 Bacteria 1878
44 Ga0068860_100605092 3300005843 Bacteria 1102
45 Ga0075363_100012101 3300006048 Bacteria 4149
46 Ga0075363_100028764 3300006048 Bacteria 2862
47 Ga0075364_10027901 3300006051 Bacteria 3609
48 Ga0075362_10009900 3300006177 Bacteria 3703
49 Ga0075367_10002893 3300006178 Bacteria 7992
50 Ga0075366_10024732 3300006195 Bacteria 3503
51 Ga0075366_10037686 3300006195 Bacteria 2855
52 Ga0075366_10213542 3300006195 Bacteria 1175
53 Ga0075370_10001680 3300006353 Bacteria 9802
54 Ga0075370_10004333 3300006353 Bacteria 6877
55 Ga0075370_10053636 3300006353 Bacteria 2288
56 Ga0075370_10065357 3300006353 Bacteria 2075
57 Ga0068871_100151562 3300006358 Bacteria 1978
58 Ga0068865_100169169 3300006881 Bacteria 1674
59 Ga0105240_10064234 3300009093 Bacteria 4562
60 Ga0105245_10137222 3300009098 Bacteria 2300
61 Ga0114129_10110878 3300009147 Bacteria 3787
62 Ga0114129_10221484 3300009147 Bacteria 2552
63 Ga0105248_10412174 3300009177 Bacteria 1521
64 Ga0105237_10019878 3300009545 Bacteria 6934
65 Ga0105237_10094415 3300009545 Bacteria 2980
66 Ga0157370_10020811 3300013104 Bacteria 6545
67 Ga0157369_10020869 3300013105 Bacteria 7323
68 Ga0157378_10490793 3300013297 Bacteria 1225
69 Ga0163162_10416140 3300013306 Bacteria 1476
70 Ga0157372_10061676 3300013307 Bacteria 4199
71 Ga0157376_10265148 3300014969 Bacteria 1611
72 Ga0213872_10012216 3300021361 Bacteria 4047
73 Ga0209759_1009996 3300025256 Bacteria 2822
74 Ga0209051_1014456 3300025303 Bacteria 3682
75 Ga0207645_10032738 3300025907 Bacteria 3342
76 Ga0207645_10059786 3300025907 Bacteria 2434
77 Ga0207645_10144700 3300025907 Bacteria 1549
78 Ga0207643_10166116 3300025908 Bacteria 1330
79 Ga0207684_10150252 3300025910 Bacteria 2004
80 Ga0207671_10007344 3300025914 Bacteria 9569
81 Ga0207649_10001907 3300025920 Bacteria 11904
82 Ga0207652_10037374 3300025921 Bacteria 4110
83 Ga0207650_10166485 3300025925 Bacteria 1749
84 Ga0207650_10219031 3300025925 Bacteria 1531
85 Ga0207644_10036488 3300025931 Bacteria 3452
86 Ga0207644_10135785 3300025931 Bacteria 1888
87 Ga0207690_10005271 3300025932 Bacteria 7620
88 Ga0207706_10012122 3300025933 Bacteria 7852
89 Ga0207706_10056159 3300025933 Bacteria 3472
90 Ga0207706_10221260 3300025933 Bacteria 1657
91 Ga0207709_10169105 3300025935 Bacteria 1532
92 Ga0207704_10060685 3300025938 Bacteria 2341
93 Ga0207691_10081109 3300025940 Bacteria 2917
94 Ga0207711_10342327 3300025941 Bacteria 1384
95 Ga0207679_10000290 3300025945 Bacteria 37996
96 Ga0207679_10376403 3300025945 Bacteria 1244
97 Ga0207651_10056022 3300025960 Bacteria 2711
98 Ga0207640_10048306 3300025981 Bacteria 2750
99 Ga0207658_10005613 3300025986 Bacteria 8580
100 Ga0207658_10269413 3300025986 Bacteria 1455
101 Ga0207703_10174984 3300026035 Bacteria 1891
102 Ga0207703_10491047 3300026035 Bacteria 1151
103 Ga0207639_10393061 3300026041 Bacteria 1248
104 Ga0207678_10001796 3300026067 Bacteria 19639
105 Ga0207678_10196878 3300026067 Bacteria 1722
106 Ga0207641_10204913 3300026088 Bacteria 1821
107 Ga0207648_10006905 3300026089 Bacteria 11247
108 Ga0207648_10179194 3300026089 Bacteria 1875
109 Ga0207676_10049365 3300026095 Bacteria 3273
110 Ga0207674_10009907 3300026116 Bacteria 10841
111 Ga0207674_10060923 3300026116 Bacteria 3815
112 Ga0207675_100430983 3300026118 Bacteria 1304
113 Ga0207683_10047714 3300026121 Bacteria 3750
114 Ga0207683_10184960 3300026121 Bacteria 1890
115 Ga0207683_10212157 3300026121 Bacteria 1763
116 Ga0207698_10166125 3300026142 Bacteria 1937
117 Ga0209974_10001223 3300027876 Bacteria 9188
118 Ga0268266_10053144 3300028379 Bacteria 3479
119 Ga0268264_10077730 3300028381 Bacteria 2828
120 Ga0268264_10270364 3300028381 Bacteria 1588
121 Ga0265336_10000006 3300028666 Bacteria 348453
122 Ga0307517_10000058 3300028786 Bacteria 148725
123 Ga0307517_10050865 3300028786 Bacteria 4198
124 Ga0307517_10076240 3300028786 Bacteria 2931
125 Ga0307517_10132888 3300028786 Bacteria 1783
126 Ga0307517_10192781 3300028786 Bacteria 1290
127 Ga0307515_10009636 3300028794 Bacteria 18637
128 Ga0307515_10012744 3300028794 Bacteria 15789
129 Ga0307515_10033183 3300028794 Bacteria 8511
130 Ga0307515_10079877 3300028794 Bacteria 4276
131 Ga0307515_10081032 3300028794 Bacteria 4222
132 Ga0307515_10106549 3300028794 Bacteria 3324
133 Ga0307515_10216718 3300028794 Bacteria 1743
134 Ga0265324_10000574 3300029957 Bacteria 25017
135 Ga0307512_10068260 3300030522 Bacteria 2669
136 Ga0307512_10157444 3300030522 Bacteria 1340
137 Ga0307513_10033179 3300031456 Bacteria 5805
138 Ga0307513_10138618 3300031456 Bacteria 2363
139 Ga0307513_10354293 3300031456 Bacteria 1214
140 Ga0307509_10000930 3300031507 Bacteria 50124
141 Ga0307509_10012696 3300031507 Bacteria 10044
142 Ga0307509_10023636 3300031507 Bacteria 6895
143 Ga0307509_10047044 3300031507 Bacteria 4641
144 Ga0307509_10081153 3300031507 Bacteria 3351
145 Ga0307508_10000056 3300031616 Bacteria 126640
146 Ga0307508_10014699 3300031616 Bacteria 7139
147 Ga0307508_10038605 3300031616 Bacteria 4290
148 Ga0307508_10279051 3300031616 Bacteria 1264
149 Ga0307514_10061812 3300031649 Bacteria 2851
150 Ga0307514_10077248 3300031649 Bacteria 2477
151 Ga0307514_10193104 3300031649 Bacteria 1293
152 Ga0307516_10000181 3300031730 Bacteria 81531
153 Ga0307516_10044840 3300031730 Bacteria 4372
154 Ga0307507_10053911 3300033179 Bacteria 3835
155 Ga0307510_10017105 3300033180 Bacteria 8554
156 Ga0307510_10043390 3300033180 Bacteria 4889
157 Ga0307510_10073170 3300033180 Bacteria 3398
158 Ga0307510_10205578 3300033180 Bacteria 1497
159 Ga0307510_10225171 3300033180 Bacteria 1383
160 Ga0395900_0000904 3300037418 Bacteria 39054
161 Ga0395898_0001196 3300037466 Bacteria 39243
162 Ga0395905_0007038 3300037471 Bacteria 11242
163 Ga0451802_0147846 3300041460 Bacteria 1371
164 Ga0451853_3346179 3300041512 Bacteria 1719
165 Ga0439449_0051974 3300042007 Bacteria 1516
166 Ga0466969_0000069 3300044656 Bacteria 53389
167 Ga0466969_0000117 3300044656 Bacteria 42213
168 Ga0466969_0000214 3300044656 Bacteria 31632
169 Ga0466969_0025588 3300044656 Bacteria 3032
170 Ga0466972_0026764 3300044658 Bacteria 2857
171 Ga0466965_0117127 3300044683 Bacteria 1373
172 Ga0466966_0004121 3300044684 Bacteria 9602
173 Ga0466966_0009214 3300044684 Bacteria 6535
174 Ga0466966_0051089 3300044684 Bacteria 2629
175 Ga0466961_0016880 3300044693 Bacteria 4691
176 Ga0466961_0058709 3300044693 Bacteria 2447
177 Ga0466961_0157916 3300044693 Bacteria 1414
178 Ga0466963_0081054 3300044694 Bacteria 2197
179 Ga0453684_0035562 3300044712 Bacteria 6881
180 Ga0466970_0037297 3300044765 Bacteria 2576
181 Ga0466970_0038502 3300044765 Bacteria 2536
182 Ga0466957_0213533 3300044842 Bacteria 1271
183 Ga0466959_0001954 3300045049 Bacteria 12989
184 Ga0466959_0067507 3300045049 Bacteria 2592
185 Ga0466967_0007902 3300045976 Bacteria 7733
186 Ga0495592_0002538 3300046454 Bacteria 12885
187 Ga0495650_0008156 3300046471 Bacteria 6162
188 Ga0495583_0001986 3300046506 Bacteria 18752
189 Ga0495606_0106216 3300046507 Bacteria 1700
190 Ga0495610_0057048 3300046512 Bacteria 1875
191 Ga0495620_0112819 3300046515 Bacteria 1076
192 Ga0495630_0046898 3300046517 Bacteria 3231
193 Ga0495632_0108076 3300046519 Bacteria 1307
194 Ga0495643_0032895 3300046522 Bacteria 2874
195 Ga0495597_0032230 3300046542 Bacteria 2379
196 Ga0495668_0200700 3300046616 Bacteria 1092
197 Ga0495625_0008972 3300046660 Bacteria 8446
198 Ga0495625_0022942 3300046660 Bacteria 4775
199 Ga0495625_0271107 3300046660 Bacteria 1095
200 Ga0495671_0133317 3300046692 Bacteria 1211
201 Ga0495649_0002845 3300046694 Bacteria 12016
202 Ga0495589_0011110 3300046794 Bacteria 4673
203 Ga0495687_000153 3300047443 Bacteria 105215
204 Ga0495687_003691 3300047443 Bacteria 10882
205 Ga0495686_0003491 3300047472 Bacteria 13585
206 Ga0495686_0053474 3300047472 Bacteria 2531
207 Ga0495593_0019532 3300047673 Bacteria 3799
208 Ga0496106_0025445 3300048909 Bacteria 4405
209 Ga0496114_0015107 3300048917 Bacteria 6207
210 Ga0501043_0000013 3300049579 Bacteria 185639
211 Ga0501046_0004913 3300049580 Bacteria 12024
212 Ga0501047_0000040 3300049581 Bacteria 185677
213 Ga0501048_0004635 3300049582 Bacteria 10463
214 Ga0501252_004508 3300049682 Bacteria 1486
215 Ga0501045_0051036 3300049824 Bacteria 3018
216 nmdc:mga03683_82435_c1 3300050489 Bacteria 1391
217 nmdc:mga0k408_18374_c1 3300050493 Bacteria 3903
218 nmdc:mga0k408_4913_c1 3300050493 Bacteria 7085
219 nmdc:mga06z11_101314_c1 3300050494 Bacteria 1580
220 nmdc:mga07m45_155955_c1 3300050496 Bacteria 1324
221 nmdc:mga07m45_229681_c1 3300050496 Bacteria 1080
222 nmdc:mga07m45_80_c1 3300050496 Bacteria 35968
223 nmdc:mga05p37_284598_c1 3300050507 Bacteria 1970
224 nmdc:mga0sz30_37155_c1 3300050516 Bacteria 2038
225 Ga0500578_0147150 3300053086 Bacteria 1469
226 Ga0500651_0152272 3300053093 Bacteria 1388
227 Ga0500658_0009544 3300053134 Bacteria 3576
228 Ga0500559_0000011 3300053136 Bacteria 164751
229 Ga0500561_0004606 3300053137 Bacteria 2501
230 Ga0500589_022664 3300053147 Bacteria 2890
231 Ga0500619_000384 3300053154 Bacteria 8221
232 Ga0500622_0000703 3300053156 Bacteria 29402
233 Ga0500636_0099608 3300053177 Bacteria 1654
234 Ga0500645_022388 3300053730 Bacteria 1944
235 Ga0500587_002604 3300053739 Bacteria 2563
236 Ga0500587_003919 3300053739 Bacteria 2059

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046515 Ga0495620_0112819 Ga0495620_0112819_250_1062 228
2 3300026089 Ga0207648_10179194 Ga0207648_101791942 229
3 3300044765 Ga0466970_0037297 Ga0466970_0037297_1732_2565 235
4 3300045049 Ga0466959_0067507 Ga0466959_0067507_12_845 235
5 3300033180 Ga0307510_10073170 Ga0307510_100731702 256
6 3300053093 Ga0500651_0152272 Ga0500651_0152272_222_1187 256
7 3300053136 Ga0500559_0000011 Ga0500559_0000011_112514_113479 256
8 3300053156 Ga0500622_0000703 Ga0500622_0000703_24629_25594 256
9 3300053177 Ga0500636_0099608 Ga0500636_0099608_292_1257 256
10 3300053739 Ga0500587_002604 Ga0500587_002604_1024_1989 256
11 3300005564 Ga0070664_100034870 Ga0070664_1000348702 262
12 3300009147 Ga0114129_10221484 Ga0114129_102214842 262
13 3300044842 Ga0466957_0213533 Ga0466957_0213533_244_1215 262
14 3300028786 Ga0307517_10076240 Ga0307517_100762402 263
15 3300028794 Ga0307515_10106549 Ga0307515_101065492 263
16 3300031616 Ga0307508_10014699 Ga0307508_100146992 264
17 3300050494 nmdc:mga06z11_101314_c1 nmdc:mga06z11_101314_c1_118_1083 266
18 3300006195 Ga0075366_10024732 Ga0075366_100247323 267
19 3300006353 Ga0075370_10001680 Ga0075370_100016804 267
20 3300025932 Ga0207690_10005271 Ga0207690_100052711 267
21 3300050493 nmdc:mga0k408_4913_c1 nmdc:mga0k408_4913_c1_4814_5779 267
22 3300050496 nmdc:mga07m45_80_c1 nmdc:mga07m45_80_c1_2695_3660 267
23 3300044656 Ga0466969_0025588 Ga0466969_0025588_1513_2484 268
24 3300044694 Ga0466963_0081054 Ga0466963_0081054_267_1238 268
25 3300044765 Ga0466970_0038502 Ga0466970_0038502_408_1379 268
26 3300045049 Ga0466959_0001954 Ga0466959_0001954_755_1726 268
27 3300045976 Ga0466967_0007902 Ga0466967_0007902_46_1017 268
28 3300003322 rootL2_10072086 rootL2_100720862 269
29 3300005344 Ga0070661_100003240 Ga0070661_1000032407 269
30 3300005366 Ga0070659_100001277 Ga0070659_10000127715 269
31 3300005564 Ga0070664_100043375 Ga0070664_1000433753 269
32 3300025920 Ga0207649_10001907 Ga0207649_100019076 269
33 3300025945 Ga0207679_10000290 Ga0207679_1000029010 269
34 3300028794 Ga0307515_10081032 Ga0307515_100810324 269
35 3300031507 Ga0307509_10023636 Ga0307509_100236364 269
36 3300037418 Ga0395900_0000904 Ga0395900_0000904_25465_26436 269
37 3300037466 Ga0395898_0001196 Ga0395898_0001196_12759_13730 269
38 3300048909 Ga0496106_0025445 Ga0496106_0025445_2402_3343 271
39 3300049682 Ga0501252_004508 Ga0501252_004508_360_1343 271
40 3300053086 Ga0500578_0147150 Ga0500578_0147150_341_1282 271
41 3300053730 Ga0500645_022388 Ga0500645_022388_245_1186 271
42 3300033180 Ga0307510_10225171 Ga0307510_102251712 272
43 3300044656 Ga0466969_0000069 Ga0466969_0000069_30582_31646 272
44 3300025908 Ga0207643_10166116 Ga0207643_101661162 273
45 3300037471 Ga0395905_0007038 Ga0395905_0007038_3022_3969 273
46 iso_pu_bacteria 2585428062 2587755075 273
47 iso_pu_bacteria 2643221654 2644304642 273
48 3300044684 Ga0466966_0004121 Ga0466966_0004121_7223_8287 274
49 3300044693 Ga0466961_0058709 Ga0466961_0058709_862_1926 274
50 3300005331 Ga0070670_100075313 Ga0070670_1000753133 275
51 3300005367 Ga0070667_100021521 Ga0070667_1000215212 275
52 3300005455 Ga0070663_100000536 Ga0070663_10000053615 275
53 3300005548 Ga0070665_100071428 Ga0070665_1000714283 275
54 3300005618 Ga0068864_100097895 Ga0068864_1000978951 275
55 3300005841 Ga0068863_100103300 Ga0068863_1001033003 275
56 3300005843 Ga0068860_100110364 Ga0068860_1001103642 275
57 3300013297 Ga0157378_10490793 Ga0157378_104907931 275
58 3300013306 Ga0163162_10416140 Ga0163162_104161402 275
59 3300025925 Ga0207650_10166485 Ga0207650_101664852 275
60 3300025931 Ga0207644_10036488 Ga0207644_100364884 275
61 3300025986 Ga0207658_10005613 Ga0207658_100056139 275
62 3300026035 Ga0207703_10174984 Ga0207703_101749842 275
63 3300026067 Ga0207678_10001796 Ga0207678_100017961 275
64 3300026088 Ga0207641_10204913 Ga0207641_102049132 275
65 3300026095 Ga0207676_10049365 Ga0207676_100493654 275
66 3300028379 Ga0268266_10053144 Ga0268266_100531442 275
67 3300028381 Ga0268264_10077730 Ga0268264_100777304 275
68 3300028786 Ga0307517_10192781 Ga0307517_101927812 275
69 3300046512 Ga0495610_0057048 Ga0495610_0057048_558_1511 275
70 3300046522 Ga0495643_0032895 Ga0495643_0032895_580_1533 275
71 3300046616 Ga0495668_0200700 Ga0495668_0200700_122_1075 275
72 3300046692 Ga0495671_0133317 Ga0495671_0133317_247_1200 275
73 3300047472 Ga0495686_0053474 Ga0495686_0053474_1323_2276 275
74 3300053739 Ga0500587_003919 Ga0500587_003919_744_1697 275
75 3300028794 Ga0307515_10009636 Ga0307515_1000963613 277
76 3300028794 Ga0307515_10012744 Ga0307515_1001274410 277
77 3300028794 Ga0307515_10033183 Ga0307515_100331833 277
78 3300028794 Ga0307515_10216718 Ga0307515_102167181 277
79 3300030522 Ga0307512_10157444 Ga0307512_101574442 277
80 3300031456 Ga0307513_10138618 Ga0307513_101386183 277
81 3300031456 Ga0307513_10354293 Ga0307513_103542931 277
82 3300031616 Ga0307508_10000056 Ga0307508_1000005617 277
83 3300031649 Ga0307514_10061812 Ga0307514_100618122 277
84 3300031730 Ga0307516_10044840 Ga0307516_100448402 277
85 3300033179 Ga0307507_10053911 Ga0307507_100539113 277
86 3300041512 Ga0451853_3346179 Ga0451853_3346179_48_1007 277
87 3300005577 Ga0068857_100028063 Ga0068857_1000280632 278
88 3300025921 Ga0207652_10037374 Ga0207652_100373742 278
89 3300005347 Ga0070668_100297395 Ga0070668_1002973952 279
90 3300005367 Ga0070667_100274243 Ga0070667_1002742431 279
91 3300005457 Ga0070662_100050991 Ga0070662_1000509912 279
92 3300005577 Ga0068857_100027081 Ga0068857_1000270815 279
93 3300005843 Ga0068860_100212124 Ga0068860_1002121242 279
94 3300005843 Ga0068860_100605092 Ga0068860_1006050922 279
95 3300006048 Ga0075363_100012101 Ga0075363_1000121012 279
96 3300006048 Ga0075363_100028764 Ga0075363_1000287642 279
97 3300006051 Ga0075364_10027901 Ga0075364_100279012 279
98 3300006177 Ga0075362_10009900 Ga0075362_100099004 279
99 3300006178 Ga0075367_10002893 Ga0075367_100028935 279
100 3300006195 Ga0075366_10037686 Ga0075366_100376863 279
101 3300006195 Ga0075366_10213542 Ga0075366_102135422 279
102 3300006353 Ga0075370_10004333 Ga0075370_100043334 279
103 3300006353 Ga0075370_10053636 Ga0075370_100536363 279
104 3300006358 Ga0068871_100151562 Ga0068871_1001515622 279
105 3300009545 Ga0105237_10019878 Ga0105237_100198782 279
106 3300025907 Ga0207645_10032738 Ga0207645_100327382 279
107 3300025914 Ga0207671_10007344 Ga0207671_100073445 279
108 3300025933 Ga0207706_10056159 Ga0207706_100561592 279
109 3300025945 Ga0207679_10376403 Ga0207679_103764031 279
110 3300026035 Ga0207703_10491047 Ga0207703_104910472 279
111 3300026067 Ga0207678_10196878 Ga0207678_101968782 279
112 3300026116 Ga0207674_10060923 Ga0207674_100609234 279
113 3300026118 Ga0207675_100430983 Ga0207675_1004309832 279
114 3300028381 Ga0268264_10270364 Ga0268264_102703642 279
115 3300028786 Ga0307517_10000058 Ga0307517_10000058134 279
116 3300028786 Ga0307517_10132888 Ga0307517_101328882 279
117 3300030522 Ga0307512_10068260 Ga0307512_100682602 279
118 3300031456 Ga0307513_10033179 Ga0307513_100331795 279
119 3300031507 Ga0307509_10000930 Ga0307509_1000093041 279
120 3300031507 Ga0307509_10012696 Ga0307509_100126968 279
121 3300031507 Ga0307509_10047044 Ga0307509_100470445 279
122 3300031507 Ga0307509_10081153 Ga0307509_100811533 279
123 3300031616 Ga0307508_10038605 Ga0307508_100386052 279
124 3300031616 Ga0307508_10279051 Ga0307508_102790511 279
125 3300031649 Ga0307514_10077248 Ga0307514_100772482 279
126 3300031649 Ga0307514_10193104 Ga0307514_101931042 279
127 3300033180 Ga0307510_10017105 Ga0307510_100171055 279
128 3300033180 Ga0307510_10043390 Ga0307510_100433902 279
129 3300033180 Ga0307510_10205578 Ga0307510_102055782 279
130 3300044656 Ga0466969_0000214 Ga0466969_0000214_7258_8229 279
131 3300044684 Ga0466966_0051089 Ga0466966_0051089_1116_2087 279
132 3300044693 Ga0466961_0157916 Ga0466961_0157916_249_1220 279
133 3300046454 Ga0495592_0002538 Ga0495592_0002538_7016_7981 279
134 3300046517 Ga0495630_0046898 Ga0495630_0046898_1031_2005 279
135 3300046519 Ga0495632_0108076 Ga0495632_0108076_74_1039 279
136 3300046542 Ga0495597_0032230 Ga0495597_0032230_549_1514 279
137 3300046660 Ga0495625_0022942 Ga0495625_0022942_3060_4025 279
138 3300046660 Ga0495625_0271107 Ga0495625_0271107_94_1059 279
139 3300047443 Ga0495687_000153 Ga0495687_000153_1740_2705 279
140 3300047443 Ga0495687_003691 Ga0495687_003691_8742_9707 279
141 3300047472 Ga0495686_0003491 Ga0495686_0003491_9109_10092 279
142 3300047673 Ga0495593_0019532 Ga0495593_0019532_641_1615 279
143 3300050489 nmdc:mga03683_82435_c1 nmdc:mga03683_82435_c1_358_1323 279
144 3300050493 nmdc:mga0k408_18374_c1 nmdc:mga0k408_18374_c1_2081_3046 279
145 3300050496 nmdc:mga07m45_229681_c1 nmdc:mga07m45_229681_c1_92_1057 279
146 3300050516 nmdc:mga0sz30_37155_c1 nmdc:mga0sz30_37155_c1_552_1517 279
147 3300053134 Ga0500658_0009544 Ga0500658_0009544_2442_3407 279
148 3300005578 Ga0068854_100269460 Ga0068854_1002694602 280
149 3300013104 Ga0157370_10020811 Ga0157370_100208112 280
150 3300013105 Ga0157369_10020869 Ga0157369_100208695 280
151 3300013307 Ga0157372_10061676 Ga0157372_100616763 280
152 3300025925 Ga0207650_10219031 Ga0207650_102190312 280
153 3300026142 Ga0207698_10166125 Ga0207698_101661252 280
154 3300053154 Ga0500619_000384 Ga0500619_000384_1458_2426 280
155 3300005328 Ga0070676_10003295 Ga0070676_100032952 281
156 3300005334 Ga0068869_100038065 Ga0068869_1000380651 281
157 3300005338 Ga0068868_100009361 Ga0068868_1000093612 281
158 3300005354 Ga0070675_100014509 Ga0070675_1000145095 281
159 3300005355 Ga0070671_100068499 Ga0070671_1000684992 281
160 3300005364 Ga0070673_100164161 Ga0070673_1001641612 281
161 3300005459 Ga0068867_100004165 Ga0068867_1000041652 281
162 3300006353 Ga0075370_10065357 Ga0075370_100653572 281
163 3300006881 Ga0068865_100169169 Ga0068865_1001691692 281
164 3300009098 Ga0105245_10137222 Ga0105245_101372223 281
165 3300025907 Ga0207645_10059786 Ga0207645_100597862 281
166 3300025931 Ga0207644_10135785 Ga0207644_101357852 281
167 3300025935 Ga0207709_10169105 Ga0207709_101691052 281
168 3300025938 Ga0207704_10060685 Ga0207704_100606852 281
169 3300026089 Ga0207648_10006905 Ga0207648_100069056 281
170 3300026116 Ga0207674_10009907 Ga0207674_100099072 281
171 3300026121 Ga0207683_10047714 Ga0207683_100477142 281
172 3300028786 Ga0307517_10050865 Ga0307517_100508654 281
173 3300028794 Ga0307515_10079877 Ga0307515_100798774 281
174 3300031730 Ga0307516_10000181 Ga0307516_1000018141 281
175 3300041460 Ga0451802_0147846 Ga0451802_0147846_105_1082 281
176 3300050496 nmdc:mga07m45_155955_c1 nmdc:mga07m45_155955_c1_205_1179 281
177 3300053137 Ga0500561_0004606 Ga0500561_0004606_391_1368 281
178 3300005327 Ga0070658_10245428 Ga0070658_102454281 282
179 3300005331 Ga0070670_100220597 Ga0070670_1002205971 282
180 3300005333 Ga0070677_10053883 Ga0070677_100538832 282
181 3300005335 Ga0070666_10136196 Ga0070666_101361962 282
182 3300005355 Ga0070671_100079313 Ga0070671_1000793133 282
183 3300005456 Ga0070678_100146818 Ga0070678_1001468182 282
184 3300005457 Ga0070662_100038369 Ga0070662_1000383692 282
185 3300005467 Ga0070706_100051258 Ga0070706_1000512583 282
186 3300005543 Ga0070672_100084203 Ga0070672_1000842032 282
187 3300005578 Ga0068854_100133385 Ga0068854_1001333852 282
188 3300009147 Ga0114129_10110878 Ga0114129_101108782 282
189 3300009177 Ga0105248_10412174 Ga0105248_104121741 282
190 3300014969 Ga0157376_10265148 Ga0157376_102651481 282
191 3300025907 Ga0207645_10144700 Ga0207645_101447002 282
192 3300025910 Ga0207684_10150252 Ga0207684_101502522 282
193 3300025933 Ga0207706_10012122 Ga0207706_100121222 282
194 3300025933 Ga0207706_10221260 Ga0207706_102212602 282
195 3300025940 Ga0207691_10081109 Ga0207691_100811092 282
196 3300025941 Ga0207711_10342327 Ga0207711_103423271 282
197 3300025981 Ga0207640_10048306 Ga0207640_100483062 282
198 3300025986 Ga0207658_10269413 Ga0207658_102694132 282
199 3300026121 Ga0207683_10184960 Ga0207683_101849602 282
200 3300026121 Ga0207683_10212157 Ga0207683_102121572 282
201 3300027876 Ga0209974_10001223 Ga0209974_100012235 282
202 3300044656 Ga0466969_0000117 Ga0466969_0000117_21190_22164 282
203 3300044658 Ga0466972_0026764 Ga0466972_0026764_598_1569 282
204 3300044683 Ga0466965_0117127 Ga0466965_0117127_173_1144 282
205 3300044684 Ga0466966_0009214 Ga0466966_0009214_2697_3671 282
206 3300044693 Ga0466961_0016880 Ga0466961_0016880_3343_4317 282
207 3300044712 Ga0453684_0035562 Ga0453684_0035562_4262_5233 282
208 3300048917 Ga0496114_0015107 Ga0496114_0015107_1143_2171 282
209 3300049579 Ga0501043_0000013 Ga0501043_0000013_101023_102024 282
210 3300049580 Ga0501046_0004913 Ga0501046_0004913_1846_2847 282
211 3300049581 Ga0501047_0000040 Ga0501047_0000040_101023_102024 282
212 3300049582 Ga0501048_0004635 Ga0501048_0004635_4942_5943 282
213 3300049824 Ga0501045_0051036 Ga0501045_0051036_437_1438 282
214 3300050507 nmdc:mga05p37_284598_c1 nmdc:mga05p37_284598_c1_553_1566 282
215 3300005327 Ga0070658_10111934 Ga0070658_101119342 283
216 3300005364 Ga0070673_100007049 Ga0070673_1000070492 283
217 3300005445 Ga0070708_100051616 Ga0070708_1000516162 283
218 3300005459 Ga0068867_100222794 Ga0068867_1002227942 283
219 3300005539 Ga0068853_100011494 Ga0068853_1000114943 283
220 3300005563 Ga0068855_100278148 Ga0068855_1002781481 283
221 3300009093 Ga0105240_10064234 Ga0105240_100642342 283
222 3300009545 Ga0105237_10094415 Ga0105237_100944153 283
223 3300021361 Ga0213872_10012216 Ga0213872_100122163 283
224 3300025256 Ga0209759_1009996 Ga0209759_10099962 283
225 3300025303 Ga0209051_1014456 Ga0209051_10144562 283
226 3300025960 Ga0207651_10056022 Ga0207651_100560222 283
227 3300042007 Ga0439449_0051974 Ga0439449_0051974_244_1284 283
228 3300046471 Ga0495650_0008156 Ga0495650_0008156_2325_3305 283
229 3300046506 Ga0495583_0001986 Ga0495583_0001986_9180_10160 283
230 3300046507 Ga0495606_0106216 Ga0495606_0106216_30_1010 283
231 3300046660 Ga0495625_0008972 Ga0495625_0008972_2689_3669 283
232 3300046694 Ga0495649_0002845 Ga0495649_0002845_3984_4964 283
233 3300046794 Ga0495589_0011110 Ga0495589_0011110_80_1060 283
234 3300053147 Ga0500589_022664 Ga0500589_022664_797_1777 283
235 3300003316 rootH1_10055252 rootH1_100552521 284
236 3300026041 Ga0207639_10393061 Ga0207639_103930611 284
237 3300028666 Ga0265336_10000006 Ga0265336_100000065 284
238 3300029957 Ga0265324_10000574 Ga0265324_1000057410 284

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02685

Glucokinase

Glucokinase

33

347

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7s38-assembly1.cif.gz_P cas9:sgrna:dna (s. pyogenes) forming a 3-base-pair r-loop 0.89 9 24
1sz2-assembly1.cif.gz_A crystal structure of e. coli glucokinase in complex with glucose 0.8802 9 282
1sz2-assembly1.cif.gz_A crystal structure of e. coli glucokinase in complex with glucose 0.8489 9 282
7qr0-assembly1.cif.gz_B spcas9 bound to trac off-target1 dna substrate 0.8017 9 26
3qdk-assembly1.cif.gz_A structural insight on mechanism and diverse substrate selection strategy of ribulokinase 0.7987 9 40
ID Description Score Start End Superfamily
af_P0A6V8_2_105_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9508 7 106 3.30.420.40
1sz2A01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9377 9 105 3.30.420.40
3vpzA01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9286 6 105 3.30.420.40
3vpzA02 Alpha Beta;3-Layer(aba) Sandwich;Hexokinase; domain 1; 0.9242 109 266 3.40.367.20
af_P0A6V8_2_105_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8983 7 106 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A327KDW3-F1-model_v4 Glucokinase 0.9773 144 269 GO:0004340
GO:0005524
GO:0005536
GO:0005829
GO:0006096
AF-A0A2X1N584-F1-model_v4 Glucokinase (EC 2.7.1.2) 0.9645 145 268 GO:0004340
GO:0005524
GO:0005536
GO:0005829
GO:0006096
AF-A0A354J109-F1-model_v4 Bifunctional transcriptional regulator/glucokinase (EC 2.7.1.2) 0.9598 13 106 GO:0004340
GO:0005524
GO:0005536
GO:0005829
GO:0006096
AF-A0A646IJS3-F1-model_v4 Bifunctional transcriptional regulator/glucokinase (EC 2.7.1.2) 0.9595 134 268 GO:0004340
GO:0005524
GO:0005536
GO:0005829
GO:0006096
AF-A0A357L0K2-F1-model_v4 Glucokinase 0.9592 161 259 GO:0004340
GO:0005524
GO:0005536
GO:0005829
GO:0006096

Feature Viewer

pLDDT pTM Quality
84.14 0.68 Medium
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Predicted Structure (AlphaFold2)

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