F350185

General Info

Members Datasets Scaffolds Average Seq Length
237 152 474 322

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0045887|Ga0316582_0045887_195_1265
Length 356
Sequence MLPKADYESQFTISIFSKGELKMARPITLFTGQWADLPLETLAQKVSEWGYDGLELACWGDHFEVDKALESDSYIRQKRDLLEKFGLKCWAISTHLVGQGVCDPIDERHKGILPARLWGDGDPEGVRQRCAEEVANTARAAAAFDVKNVNGFTGSPIWHMLYSFPPNDFEQIEAGYREFADRWSPILDVFDEVDVKYGLEVHPSEIAYDFVTTEKTLAAINRHPAFGINFDPSHMVHQFLDPAAFIEEFGDRIYHVHVKDAKVLVGNGRRSILGSHLDFGEGRRGWNFVSPGHGSVDFEAMFRALNSIGYTGPLSVEWEDSGMDRDWGAPDALAFIRRTDFAPSTMAFDAAFASEE

Samples

Sample ID Description Type Environment
1 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
35 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
36 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
38 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
54 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
55 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
56 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
57 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
60 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
61 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
62 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
63 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
64 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
65 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
66 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
67 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
68 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
69 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
70 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
71 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
72 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
73 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
74 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
75 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
76 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
84 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
93 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
94 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
95 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
96 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
97 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
98 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
101 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
102 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
103 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
106 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
132 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
146 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
152 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0.42
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.42
Nodule 0
Rhizoplane 10.13
Rhizosphere 87.34
Stem 0
Stem Tuber 0
Unclassified 1.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316582_0045887 3300036647 Bacteria 2753
2 JGI25407J50210_10000643 3300003373 Bacteria 7174
3 Ga0070658_10004677 3300005327 Bacteria 11129
4 Ga0070682_100011210 3300005337 Bacteria 5115
5 Ga0068868_100036335 3300005338 Bacteria 3812
6 Ga0070692_10086857 3300005345 Bacteria 1694
7 Ga0070668_100149114 3300005347 Bacteria 1890
8 Ga0070674_100245590 3300005356 Bacteria 1404
9 Ga0070714_100074862 3300005435 Bacteria 2937
10 Ga0070708_100024909 3300005445 Bacteria 5113
11 Ga0070663_100138494 3300005455 Bacteria 1855
12 Ga0070698_100053403 3300005471 Bacteria 4106
13 Ga0070699_100000506 3300005518 Bacteria 36957
14 Ga0070699_100232894 3300005518 Bacteria 1643
15 Ga0070684_100159262 3300005535 Bacteria 2047
16 Ga0070665_100375174 3300005548 Bacteria 1429
17 Ga0070704_100084223 3300005549 Bacteria 2350
18 Ga0068856_100372696 3300005614 Bacteria 1446
19 Ga0068859_100064816 3300005617 Bacteria 3687
20 Ga0068864_100139370 3300005618 Bacteria 2187
21 Ga0081455_10035601 3300005937 Bacteria 4446
22 Ga0081538_10001787 3300005981 Bacteria 21697
23 Ga0081538_10009688 3300005981 Bacteria 7996
24 Ga0081538_10039595 3300005981 Bacteria 3021
25 Ga0081540_1000498 3300005983 Bacteria 38585
26 Ga0081540_1084588 3300005983 Bacteria 1415
27 Ga0081539_10003073 3300005985 Bacteria 21510
28 Ga0070717_10002959 3300006028 Bacteria 12074
29 Ga0070717_10341066 3300006028 Bacteria 1338
30 Ga0075431_100018025 3300006847 Bacteria 7182
31 Ga0075434_100080373 3300006871 Bacteria 3257
32 Ga0097620_100064813 3300006931 Bacteria 3687
33 Ga0111539_10091895 3300009094 Bacteria 3566
34 Ga0114129_10562788 3300009147 Bacteria 1481
35 Ga0105243_10120168 3300009148 Bacteria 2214
36 Ga0105238_10312877 3300009551 Bacteria 1555
37 Ga0163162_10541154 3300013306 Bacteria 1293
38 Ga0157375_10148973 3300013308 Bacteria 2474
39 Ga0182008_10105211 3300014497 Bacteria 1396
40 Ga0163161_10350892 3300017792 Bacteria 1173
41 Ga0206356_10365337 3300020070 Bacteria 2522
42 Ga0207426_1010358 3300025302 Bacteria 3621
43 Ga0207645_10050893 3300025907 Bacteria 2646
44 Ga0207705_10014765 3300025909 Bacteria 5615
45 Ga0207662_10042020 3300025918 Bacteria 2694
46 Ga0207657_10056485 3300025919 Bacteria 3387
47 Ga0207700_10224812 3300025928 Bacteria 1593
48 Ga0207706_10023988 3300025933 Bacteria 5473
49 Ga0207669_10205180 3300025937 Bacteria 1434
50 Ga0207704_10125540 3300025938 Bacteria 1766
51 Ga0207691_10225135 3300025940 Bacteria 1625
52 Ga0207679_10020820 3300025945 Bacteria 4434
53 Ga0207678_10082928 3300026067 Bacteria 2742
54 Ga0207708_10280821 3300026075 Bacteria 1349
55 Ga0207702_10390487 3300026078 Bacteria 1340
56 Ga0207641_10432696 3300026088 Bacteria 1269
57 Ga0207674_10436394 3300026116 Bacteria 1266
58 Ga0265319_1006554 3300028563 Bacteria 5376
59 Ga0265334_10017554 3300028573 Bacteria 2954
60 Ga0265318_10000753 3300028577 Bacteria 21576
61 Ga0265323_10059298 3300028653 Bacteria 1335
62 Ga0265322_10001352 3300028654 Bacteria 8127
63 Ga0265322_10016316 3300028654 Bacteria 2143
64 Ga0265338_10006253 3300028800 Bacteria 15239
65 Ga0265338_10012898 3300028800 Bacteria 9493
66 Ga0265324_10026181 3300029957 Bacteria 2065
67 Ga0265330_10007163 3300031235 Bacteria 5463
68 Ga0265330_10033979 3300031235 Bacteria 2279
69 Ga0265332_10095788 3300031238 Bacteria 1253
70 Ga0265328_10003485 3300031239 Bacteria 6944
71 Ga0265320_10044213 3300031240 Bacteria 2195
72 Ga0265325_10001477 3300031241 Bacteria 16563
73 Ga0265325_10012434 3300031241 Bacteria 4867
74 Ga0265329_10019796 3300031242 Bacteria 2280
75 Ga0265340_10042776 3300031247 Bacteria 2222
76 Ga0265339_10013471 3300031249 Bacteria 4953
77 Ga0265339_10068068 3300031249 Bacteria 1903
78 Ga0265327_10003872 3300031251 Bacteria 13792
79 Ga0265327_10020521 3300031251 Bacteria 4021
80 Ga0265316_10008979 3300031344 Bacteria 9218
81 Ga0265313_10005640 3300031595 Bacteria 9148
82 Ga0265313_10010564 3300031595 Bacteria 5822
83 Ga0316575_10025075 3300031665 Bacteria 2311
84 Ga0316579_10008058 3300031691 Bacteria 4376
85 Ga0316579_10023461 3300031691 Bacteria 2770
86 Ga0316579_10109220 3300031691 Bacteria 1327
87 Ga0265314_10004635 3300031711 Bacteria 12648
88 Ga0265314_10005854 3300031711 Bacteria 11006
89 Ga0265342_10025012 3300031712 Bacteria 3760
90 Ga0316578_10012599 3300031728 Bacteria 4462
91 Ga0316578_10030304 3300031728 Bacteria 3074
92 Ga0316578_10144247 3300031728 Bacteria 1434
93 Ga0316577_10002998 3300031733 Bacteria 8454
94 Ga0307413_10224165 3300031824 Bacteria 1375
95 Ga0307410_10001673 3300031852 Bacteria 10201
96 Ga0307406_10021706 3300031901 Bacteria 3801
97 Ga0307409_100004873 3300031995 Bacteria 7630
98 Ga0307416_100072289 3300032002 Bacteria 2870
99 Ga0307415_100006937 3300032126 Bacteria 6153
100 Ga0307415_100036279 3300032126 Bacteria 3229
101 Ga0316574_0036180 3300035398 Bacteria 3021
102 Ga0316574_0055403 3300035398 Unclassified 2478
103 Ga0316574_0113472 3300035398 Bacteria 1738
104 Ga0316582_0025223 3300036647 Unclassified 3568
105 Ga0316582_0068415 3300036647 Bacteria 2293
106 Ga0316584_0060477 3300036712 Unclassified 2837
107 Ga0316584_0472447 3300036712 Bacteria 884
108 Ga0395898_0102905 3300037466 Bacteria 2741
109 Ga0316581_0010492 3300037588 Bacteria 2571
110 Ga0436364_1211239 3300037853 Bacteria 1794
111 Ga0436364_1314205 3300037853 Bacteria 1620
112 Ga0395901_0373725 3300038443 Bacteria 1468
113 Ga0400484_15472 3300038725 Bacteria 15229
114 Ga0436365_1425970 3300039437 Bacteria 1126
115 Ga0436363_0082174 3300039450 Bacteria 4577
116 Ga0439464_0041995 3300042439 Bacteria 1305
117 Ga0439460_0011699 3300042461 Bacteria 2267
118 Ga0439460_0055495 3300042461 Bacteria 1198
119 Ga0451577_0004220 3300042876 Bacteria 15325
120 Ga0451577_0009752 3300042876 Bacteria 9206
121 Ga0451577_0019863 3300042876 Bacteria 6171
122 Ga0451577_0388718 3300042876 Unclassified 1266
123 Ga0466972_0026517 3300044658 Bacteria 2872
124 Ga0453683_0000039 3300044673 Bacteria 228860
125 Ga0453683_0001094 3300044673 Bacteria 24893
126 Ga0453683_0043818 3300044673 Bacteria 2808
127 Ga0453683_0109099 3300044673 Bacteria 1740
128 Ga0466965_0028023 3300044683 Bacteria 2734
129 Ga0466963_0042648 3300044694 Bacteria 2980
130 Ga0466963_0119814 3300044694 Bacteria 1810
131 Ga0453684_0000154 3300044712 Bacteria 305062
132 Ga0453684_0000553 3300044712 Bacteria 141396
133 Ga0453684_0032903 3300044712 Bacteria 7240
134 Ga0453684_0056749 3300044712 Bacteria 5076
135 Ga0453684_0137847 3300044712 Bacteria 2918
136 Ga0453684_0176123 3300044712 Bacteria 2515
137 Ga0453684_0288481 3300044712 Bacteria 1869
138 Ga0466968_0002578 3300044735 Bacteria 6659
139 Ga0466968_0118431 3300044735 Bacteria 1196
140 Ga0466957_0073608 3300044842 Bacteria 2117
141 Ga0466960_0008439 3300044901 Bacteria 4220
142 Ga0451576_0000032 3300045051 Bacteria 397014
143 Ga0451576_0000952 3300045051 Bacteria 54377
144 Ga0451576_0011158 3300045051 Bacteria 10244
145 Ga0451576_0016312 3300045051 Bacteria 8203
146 Ga0451576_0041402 3300045051 Bacteria 4871
147 Ga0451576_0060896 3300045051 Bacteria 3937
148 Ga0451576_0284657 3300045051 Bacteria 1728
149 Ga0451576_0640348 3300045051 Bacteria 1117
150 Ga0466967_0004085 3300045976 Bacteria 9744
151 Ga0466967_0041563 3300045976 Bacteria 3965
152 Ga0466967_0263283 3300045976 Bacteria 1650
153 Ga0466967_0831587 3300045976 Bacteria 917
154 Ga0495603_0027222 3300046455 Bacteria 3451
155 Ga0495620_0068383 3300046515 Bacteria 1459
156 Ga0495635_0122555 3300046663 Bacteria 1773
157 Ga0495613_0061009 3300046689 Bacteria 2762
158 Ga0495674_0181429 3300047319 Bacteria 1753
159 Ga0496100_0128778 3300048903 Bacteria 1780
160 Ga0496102_0073113 3300048905 Bacteria 3151
161 Ga0496104_0063363 3300048907 Bacteria 3506
162 Ga0496104_0065590 3300048907 Bacteria 3446
163 Ga0496104_0371393 3300048907 Bacteria 1343
164 Ga0496107_0124901 3300048910 Bacteria 1897
165 Ga0496108_0011058 3300048911 Bacteria 7328
166 Ga0496108_0096884 3300048911 Bacteria 2513
167 Ga0496108_0108418 3300048911 Bacteria 2372
168 Ga0496108_0216507 3300048911 Bacteria 1663
169 Ga0496109_0000461 3300048912 Bacteria 34811
170 Ga0496109_0021326 3300048912 Bacteria 5728
171 Ga0496109_0126228 3300048912 Bacteria 2386
172 Ga0496111_0014989 3300048914 Bacteria 5311
173 Ga0496111_0047935 3300048914 Bacteria 3078
174 Ga0496112_0012729 3300048915 Bacteria 7737
175 Ga0496112_0087660 3300048915 Bacteria 3080
176 Ga0496112_0121725 3300048915 Bacteria 2579
177 Ga0496112_0241852 3300048915 Bacteria 1757
178 Ga0496113_0065545 3300048916 Bacteria 2749
179 Ga0496113_0081221 3300048916 Bacteria 2484
180 Ga0496114_0208837 3300048917 Bacteria 1712
181 Ga0496114_0465467 3300048917 Bacteria 1119
182 Ga0496115_0001877 3300048918 Bacteria 15053
183 Ga0501031_0009514 3300049568 Bacteria 6324
184 Ga0501031_0020657 3300049568 Bacteria 4294
185 Ga0501034_0346382 3300049571 Bacteria 1415
186 Ga0501036_0093345 3300049572 Bacteria 2543
187 Ga0501039_0007843 3300049575 Bacteria 8139
188 Ga0501039_0121822 3300049575 Bacteria 2044
189 Ga0501040_0011965 3300049576 Bacteria 5677
190 Ga0501040_0022519 3300049576 Bacteria 4217
191 Ga0501040_0073084 3300049576 Bacteria 2369
192 Ga0501041_0045079 3300049577 Bacteria 2680
193 Ga0501041_0120769 3300049577 Bacteria 1628
194 Ga0501042_0071634 3300049578 Bacteria 2479
195 Ga0501042_0094400 3300049578 Bacteria 2148
196 Ga0501042_0167301 3300049578 Bacteria 1586
197 Ga0501042_0260224 3300049578 Bacteria 1252
198 Ga0501043_0181828 3300049579 Bacteria 1638
199 Ga0501046_0067533 3300049580 Bacteria 2784
200 Ga0501048_0003733 3300049582 Bacteria 11614
201 Ga0501048_0033519 3300049582 Bacteria 3710
202 Ga0501067_0161987 3300049583 Bacteria 1245
203 Ga0501068_0098848 3300049584 Bacteria 1807
204 Ga0501068_0190584 3300049584 Bacteria 1298
205 Ga0501069_0015050 3300049585 Bacteria 4143
206 Ga0501069_0015580 3300049585 Bacteria 4075
207 Ga0501069_0178183 3300049585 Bacteria 1228
208 Ga0501072_0012704 3300049588 Bacteria 6439
209 Ga0501072_0098486 3300049588 Bacteria 2324
210 Ga0501075_0061198 3300049591 Bacteria 2836
211 Ga0501076_0071553 3300049592 Bacteria 2774
212 Ga0501076_0098994 3300049592 Bacteria 2349
213 Ga0501076_0138939 3300049592 Bacteria 1973
214 Ga0501077_0033995 3300049593 Bacteria 3244
215 Ga0501077_0097363 3300049593 Bacteria 1864
216 Ga0501079_0075147 3300049741 Bacteria 2612
217 Ga0501079_0107026 3300049741 Bacteria 2170
218 Ga0501079_0132385 3300049741 Bacteria 1940
219 Ga0501080_0158676 3300049742 Bacteria 2089
220 Ga0501081_0005360 3300049743 Bacteria 8275
221 Ga0501083_0054981 3300049744 Bacteria 2670
222 Ga0501083_0194841 3300049744 Bacteria 1322
223 Ga0501045_0071452 3300049824 Bacteria 2554
224 Ga0501045_0135417 3300049824 Bacteria 1831
225 nmdc:mga06r32_14566_c1 3300050510 Bacteria 7139
226 nmdc:mga06r32_90452_c1 3300050510 Bacteria 2990
227 nmdc:mga08y16_17746_c1 3300050511 Bacteria 7494
228 nmdc:mga0n895_68745_c1 3300050512 Bacteria 3509
229 nmdc:mga0rr50_298540_c1 3300050513 Bacteria 1347
230 nmdc:mga0a205_3661_c1 3300050515 Bacteria 13766
231 Ga0495612_0074957 3300053078 Bacteria 1415
232 Ga0501084_0122897 3300054114 Bacteria 2183
233 Ga0501082_0031752 3300060353 Bacteria 4555
234 Ga0501082_0063235 3300060353 Bacteria 3186
235 Ga0501082_0206201 3300060353 Bacteria 1710
236 Ga0466962_0009467 3300061719 Bacteria 4671
237 Ga0530510_0057536 3300061734 Bacteria 2809
238 Ga0316582_0045887
239 JGI25407J50210_10000643
240 Ga0070658_10004677
241 Ga0070682_100011210
242 Ga0068868_100036335
243 Ga0070692_10086857
244 Ga0070668_100149114
245 Ga0070674_100245590
246 Ga0070714_100074862
247 Ga0070708_100024909
248 Ga0070663_100138494
249 Ga0070698_100053403
250 Ga0070699_100000506
251 Ga0070699_100232894
252 Ga0070684_100159262
253 Ga0070665_100375174
254 Ga0070704_100084223
255 Ga0068856_100372696
256 Ga0068859_100064816
257 Ga0068864_100139370
258 Ga0081455_10035601
259 Ga0081538_10001787
260 Ga0081538_10009688
261 Ga0081538_10039595
262 Ga0081540_1000498
263 Ga0081540_1084588
264 Ga0081539_10003073
265 Ga0070717_10002959
266 Ga0070717_10341066
267 Ga0075431_100018025
268 Ga0075434_100080373
269 Ga0097620_100064813
270 Ga0111539_10091895
271 Ga0114129_10562788
272 Ga0105243_10120168
273 Ga0105238_10312877
274 Ga0163162_10541154
275 Ga0157375_10148973
276 Ga0182008_10105211
277 Ga0163161_10350892
278 Ga0206356_10365337
279 Ga0207426_1010358
280 Ga0207645_10050893
281 Ga0207705_10014765
282 Ga0207662_10042020
283 Ga0207657_10056485
284 Ga0207700_10224812
285 Ga0207706_10023988
286 Ga0207669_10205180
287 Ga0207704_10125540
288 Ga0207691_10225135
289 Ga0207679_10020820
290 Ga0207678_10082928
291 Ga0207708_10280821
292 Ga0207702_10390487
293 Ga0207641_10432696
294 Ga0207674_10436394
295 Ga0265319_1006554
296 Ga0265334_10017554
297 Ga0265318_10000753
298 Ga0265323_10059298
299 Ga0265322_10001352
300 Ga0265322_10016316
301 Ga0265338_10006253
302 Ga0265338_10012898
303 Ga0265324_10026181
304 Ga0265330_10007163
305 Ga0265330_10033979
306 Ga0265332_10095788
307 Ga0265328_10003485
308 Ga0265320_10044213
309 Ga0265325_10001477
310 Ga0265325_10012434
311 Ga0265329_10019796
312 Ga0265340_10042776
313 Ga0265339_10013471
314 Ga0265339_10068068
315 Ga0265327_10003872
316 Ga0265327_10020521
317 Ga0265316_10008979
318 Ga0265313_10005640
319 Ga0265313_10010564
320 Ga0316575_10025075
321 Ga0316579_10008058
322 Ga0316579_10023461
323 Ga0316579_10109220
324 Ga0265314_10004635
325 Ga0265314_10005854
326 Ga0265342_10025012
327 Ga0316578_10012599
328 Ga0316578_10030304
329 Ga0316578_10144247
330 Ga0316577_10002998
331 Ga0307413_10224165
332 Ga0307410_10001673
333 Ga0307406_10021706
334 Ga0307409_100004873
335 Ga0307416_100072289
336 Ga0307415_100006937
337 Ga0307415_100036279
338 Ga0316574_0036180
339 Ga0316574_0055403
340 Ga0316574_0113472
341 Ga0316582_0025223
342 Ga0316582_0068415
343 Ga0316584_0060477
344 Ga0316584_0472447
345 Ga0395898_0102905
346 Ga0316581_0010492
347 Ga0436364_1211239
348 Ga0436364_1314205
349 Ga0395901_0373725
350 Ga0400484_15472
351 Ga0436365_1425970
352 Ga0436363_0082174
353 Ga0439464_0041995
354 Ga0439460_0011699
355 Ga0439460_0055495
356 Ga0451577_0004220
357 Ga0451577_0009752
358 Ga0451577_0019863
359 Ga0451577_0388718
360 Ga0466972_0026517
361 Ga0453683_0000039
362 Ga0453683_0001094
363 Ga0453683_0043818
364 Ga0453683_0109099
365 Ga0466965_0028023
366 Ga0466963_0042648
367 Ga0466963_0119814
368 Ga0453684_0000154
369 Ga0453684_0000553
370 Ga0453684_0032903
371 Ga0453684_0056749
372 Ga0453684_0137847
373 Ga0453684_0176123
374 Ga0453684_0288481
375 Ga0466968_0002578
376 Ga0466968_0118431
377 Ga0466957_0073608
378 Ga0466960_0008439
379 Ga0451576_0000032
380 Ga0451576_0000952
381 Ga0451576_0011158
382 Ga0451576_0016312
383 Ga0451576_0041402
384 Ga0451576_0060896
385 Ga0451576_0284657
386 Ga0451576_0640348
387 Ga0466967_0004085
388 Ga0466967_0041563
389 Ga0466967_0263283
390 Ga0466967_0831587
391 Ga0495603_0027222
392 Ga0495620_0068383
393 Ga0495635_0122555
394 Ga0495613_0061009
395 Ga0495674_0181429
396 Ga0496100_0128778
397 Ga0496102_0073113
398 Ga0496104_0063363
399 Ga0496104_0065590
400 Ga0496104_0371393
401 Ga0496107_0124901
402 Ga0496108_0011058
403 Ga0496108_0096884
404 Ga0496108_0108418
405 Ga0496108_0216507
406 Ga0496109_0000461
407 Ga0496109_0021326
408 Ga0496109_0126228
409 Ga0496111_0014989
410 Ga0496111_0047935
411 Ga0496112_0012729
412 Ga0496112_0087660
413 Ga0496112_0121725
414 Ga0496112_0241852
415 Ga0496113_0065545
416 Ga0496113_0081221
417 Ga0496114_0208837
418 Ga0496114_0465467
419 Ga0496115_0001877
420 Ga0501031_0009514
421 Ga0501031_0020657
422 Ga0501034_0346382
423 Ga0501036_0093345
424 Ga0501039_0007843
425 Ga0501039_0121822
426 Ga0501040_0011965
427 Ga0501040_0022519
428 Ga0501040_0073084
429 Ga0501041_0045079
430 Ga0501041_0120769
431 Ga0501042_0071634
432 Ga0501042_0094400
433 Ga0501042_0167301
434 Ga0501042_0260224
435 Ga0501043_0181828
436 Ga0501046_0067533
437 Ga0501048_0003733
438 Ga0501048_0033519
439 Ga0501067_0161987
440 Ga0501068_0098848
441 Ga0501068_0190584
442 Ga0501069_0015050
443 Ga0501069_0015580
444 Ga0501069_0178183
445 Ga0501072_0012704
446 Ga0501072_0098486
447 Ga0501075_0061198
448 Ga0501076_0071553
449 Ga0501076_0098994
450 Ga0501076_0138939
451 Ga0501077_0033995
452 Ga0501077_0097363
453 Ga0501079_0075147
454 Ga0501079_0107026
455 Ga0501079_0132385
456 Ga0501080_0158676
457 Ga0501081_0005360
458 Ga0501083_0054981
459 Ga0501083_0194841
460 Ga0501045_0071452
461 Ga0501045_0135417
462 nmdc:mga06r32_14566_c1
463 nmdc:mga06r32_90452_c1
464 nmdc:mga08y16_17746_c1
465 nmdc:mga0n895_68745_c1
466 nmdc:mga0rr50_298540_c1
467 nmdc:mga0a205_3661_c1
468 Ga0495612_0074957
469 Ga0501084_0122897
470 Ga0501082_0031752
471 Ga0501082_0063235
472 Ga0501082_0206201
473 Ga0466962_0009467
474 Ga0530510_0057536

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

43

339

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zds-assembly1.cif.gz_F crystal structure of sco6571 from streptomyces coelicolor a3(2) 0.982 3 321
2zds-assembly1.cif.gz_F crystal structure of sco6571 from streptomyces coelicolor a3(2) 0.97 3 321
3lmz-assembly1.cif.gz_A-2 crystal structure of putative sugar isomerase. (yp_001305105.1) from parabacteroides distasonis atcc 8503 at 1.44 a resolution 0.8586 1 315
3p6l-assembly1.cif.gz_A crystal structure of a sugar phosphate isomerase/epimerase (bdi_1903) from parabacteroides distasonis atcc 8503 at 1.85 a resolution 0.8228 4 315
3lmz-assembly1.cif.gz_A-2 crystal structure of putative sugar isomerase. (yp_001305105.1) from parabacteroides distasonis atcc 8503 at 1.44 a resolution 0.82 1 315
ID Description Score Start End Superfamily
2zdsA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.977 3 320 3.20.20.150
2zdsA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.9709 3 320 3.20.20.150
af_P45541_1_270_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8346 4 314 3.20.20.150
af_P45541_1_270_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.826 4 314 3.20.20.150
3p6lA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8145 5 315 3.20.20.150
ID Description Score Start End GO Terms
AF-A0A357FUL4-F1-model_v4 AP endonuclease 0.9959 1 121 GO:0004519
AF-D9WTV7-F1-model_v4 AP endonuclease, family 2 0.9937 1 121 GO:0004519
AF-A0A0L0KPS9-F1-model_v4 deleted 0.9937 1 111
AF-A0A7K2XCR6-F1-model_v4 Sugar phosphate isomerase/epimerase 0.9927 1 114 GO:0016853
AF-A0A3B8PPD1-F1-model_v4 AP endonuclease 0.9862 1 209 GO:0004519

Map