F350134
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 237 | 186 | 474 | 410 |
Family's Representative Sequence
| Representative Sequence | 3300031691|Ga0316579_10000010|Ga0316579_100000104 |
| Length | 448 |
| Sequence | MTRAMATETATADEQLPRAGVEQFTAVDVIKQKRDGNVLDHARIDWVIDAYTRGIVADEQMSALLMAVLLNGMNPSETSRWTAAMLGSGERLDFSCLRRPTVDKHSTGGVGDKITLPLTPLVAACGAAVPQLSGRGLGHTGGTLDKMESIPGWRATLSTEEIMAQLETVGAVICAAGSELVPADRKLYALRDVTGTVESIPLIASSIMSKKIAEGTRALVLDVKVGNGAFMRSTEDAEILARTMVDLGNEAGVRTVALITDMSVPLGRAIGNSLEVQESLEVLAGGGPPDVVELTLTLAREMLILAGLEETDPTDMLMNGRAMDSWRRMVKVQGGEPDAPLPTARHTHDLLVPADGVLTRLDALPVGVAAWRLGAGRTRKEEPVQAGAGIVLHARPGSEVRAGQPLLTLHSDDEDLFEPAIEELRGAWEIAPAGSRPFDRTLVTNRIC |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 2 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 3 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 5 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 7 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 27 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 28 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 29 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 30 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 31 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 32 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 33 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 34 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 35 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 36 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 38 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 39 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 41 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 54 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 90 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 92 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 93 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 94 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 95 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 96 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 97 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 98 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 99 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 100 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 101 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 102 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 103 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 104 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 105 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 106 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 107 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 108 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 109 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 110 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 111 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 112 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 113 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 114 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 115 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 141 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 142 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 145 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 146 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 147 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 148 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 149 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 150 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 151 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 152 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 153 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 154 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 155 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 156 | 3300049130 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 157 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 158 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 159 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 160 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 161 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 162 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 163 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 164 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 165 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 166 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 167 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 168 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 169 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 170 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 171 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 172 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 173 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 174 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 175 | 2585427649 | Amycolatopsis japonica MG417-CF17, DSM 44213 | Isolate | Unclassified |
| 176 | 2684623035 | Frankia sp. NRRL B-16219 | Isolate | Rhizosphere |
| 177 | 2775506925 | Saccharopolyspora phatthalungensis NRRL B-24798 | Isolate | Rhizosphere |
| 178 | 2795385472 | Herbihabitans rhizosphaerae DSM 101727 | Isolate | Rhizosphere |
| 179 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 180 | 2863067949 | Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) | Isolate | Rhizosphere |
| 181 | 2883821847 | Microlunatus elymi KUDC0627 | Isolate | Rhizosphere |
| 182 | 2895880812 | Frankia sp. BMG5.11 | Isolate | Unclassified |
| 183 | 2899359706 | Amycolatopsis anabasis EGI 650086 | Isolate | Unclassified |
| 184 | 2974315732 | Rhodococcus sp. SORGH_AS 301 | Isolate | Unclassified |
| 185 | 2984523437 | Rhodococcus sp. SORGH_AS303 | Isolate | Aerial Root |
| 186 | 8054472261 | Pseudonocardia terrae RS11V-5 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.51 |
| Metatranscriptomes | 0.42 |
| Isolates | 5.06 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.42 |
| Bulb | 0 |
| Endosphere | 0.84 |
| Nodule | 0 |
| Rhizoplane | 7.59 |
| Rhizosphere | 85.65 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0316579_10000010 | 3300031691 | Bacteria | 45452 |
| 2 | JGI25406J46586_10041654 | 3300003203 | Bacteria | 1614 |
| 3 | JGI25406J46586_10042884 | 3300003203 | Bacteria | 1579 |
| 4 | Ga0070676_10075566 | 3300005328 | Bacteria | 2032 |
| 5 | Ga0068869_100022196 | 3300005334 | Bacteria | 4371 |
| 6 | Ga0070682_100053405 | 3300005337 | Bacteria | 2532 |
| 7 | Ga0070682_100126682 | 3300005337 | Bacteria | 1722 |
| 8 | Ga0068868_100011827 | 3300005338 | Bacteria | 6363 |
| 9 | Ga0068868_100013505 | 3300005338 | Bacteria | 5989 |
| 10 | Ga0070689_100072458 | 3300005340 | Bacteria | 2692 |
| 11 | Ga0070669_100024391 | 3300005353 | Bacteria | 4336 |
| 12 | Ga0070674_100024672 | 3300005356 | Bacteria | 3905 |
| 13 | Ga0070688_100020857 | 3300005365 | Bacteria | 3818 |
| 14 | Ga0070709_10002090 | 3300005434 | Bacteria | 10810 |
| 15 | Ga0070714_100046718 | 3300005435 | Bacteria | 3674 |
| 16 | Ga0070713_100084972 | 3300005436 | Bacteria | 2709 |
| 17 | Ga0070713_100106625 | 3300005436 | Bacteria | 2436 |
| 18 | Ga0070710_10001687 | 3300005437 | Bacteria | 10410 |
| 19 | Ga0070711_100008846 | 3300005439 | Bacteria | 6181 |
| 20 | Ga0070705_100011671 | 3300005440 | Bacteria | 4441 |
| 21 | Ga0070663_100130143 | 3300005455 | Bacteria | 1910 |
| 22 | Ga0070662_100008833 | 3300005457 | Bacteria | 6567 |
| 23 | Ga0070706_100158901 | 3300005467 | Bacteria | 2110 |
| 24 | Ga0070707_100042603 | 3300005468 | Bacteria | 4346 |
| 25 | Ga0070698_100017241 | 3300005471 | Bacteria | 7609 |
| 26 | Ga0070698_100040885 | 3300005471 | Bacteria | 4762 |
| 27 | Ga0070699_100002603 | 3300005518 | Bacteria | 16126 |
| 28 | Ga0070699_100140705 | 3300005518 | Bacteria | 2131 |
| 29 | Ga0070697_100035867 | 3300005536 | Bacteria | 4003 |
| 30 | Ga0070697_100097872 | 3300005536 | Bacteria | 2435 |
| 31 | Ga0070693_100135640 | 3300005547 | Bacteria | 1544 |
| 32 | Ga0070665_100148152 | 3300005548 | Bacteria | 2350 |
| 33 | Ga0070665_100313053 | 3300005548 | Bacteria | 1574 |
| 34 | Ga0070704_100026699 | 3300005549 | Bacteria | 3821 |
| 35 | Ga0068855_100014538 | 3300005563 | Bacteria | 9480 |
| 36 | Ga0068855_100368417 | 3300005563 | Bacteria | 1580 |
| 37 | Ga0068854_100012606 | 3300005578 | Bacteria | 5538 |
| 38 | Ga0068852_100054355 | 3300005616 | Bacteria | 3451 |
| 39 | Ga0068859_100157554 | 3300005617 | Bacteria | 2348 |
| 40 | Ga0068861_100258193 | 3300005719 | Bacteria | 1490 |
| 41 | Ga0068851_10059276 | 3300005834 | Bacteria | 1958 |
| 42 | Ga0068863_100000632 | 3300005841 | Bacteria | 35693 |
| 43 | Ga0068863_100076406 | 3300005841 | Bacteria | 3168 |
| 44 | Ga0081540_1012431 | 3300005983 | Bacteria | 5605 |
| 45 | Ga0081539_10001314 | 3300005985 | Bacteria | 43504 |
| 46 | Ga0070717_10012993 | 3300006028 | Bacteria | 6360 |
| 47 | Ga0070717_10088475 | 3300006028 | Bacteria | 2610 |
| 48 | Ga0070716_100003467 | 3300006173 | Bacteria | 7430 |
| 49 | Ga0070716_100028793 | 3300006173 | Bacteria | 2996 |
| 50 | Ga0070712_100063287 | 3300006175 | Bacteria | 2619 |
| 51 | Ga0097621_100134790 | 3300006237 | Bacteria | 2105 |
| 52 | Ga0075436_100011461 | 3300006914 | Bacteria | 6085 |
| 53 | Ga0097620_100157559 | 3300006931 | Bacteria | 2348 |
| 54 | Ga0111539_10066275 | 3300009094 | Bacteria | 4265 |
| 55 | Ga0105245_10009569 | 3300009098 | Bacteria | 8454 |
| 56 | Ga0105245_10077600 | 3300009098 | Bacteria | 3029 |
| 57 | Ga0105243_10027898 | 3300009148 | Bacteria | 4330 |
| 58 | Ga0105243_10197631 | 3300009148 | Bacteria | 1761 |
| 59 | Ga0105249_10000691 | 3300009553 | Bacteria | 30665 |
| 60 | Ga0105249_10060044 | 3300009553 | Bacteria | 3488 |
| 61 | Ga0105239_10036569 | 3300010375 | Bacteria | 5391 |
| 62 | Ga0163162_10064691 | 3300013306 | Bacteria | 3702 |
| 63 | Ga0157372_10157627 | 3300013307 | Bacteria | 2622 |
| 64 | Ga0163163_10015858 | 3300014325 | Bacteria | 6980 |
| 65 | Ga0163163_10201104 | 3300014325 | Bacteria | 2041 |
| 66 | Ga0163163_10288479 | 3300014325 | Bacteria | 1693 |
| 67 | Ga0157379_10164258 | 3300014968 | Bacteria | 2004 |
| 68 | Ga0157376_10090693 | 3300014969 | Bacteria | 2645 |
| 69 | Ga0163161_10001904 | 3300017792 | Bacteria | 15238 |
| 70 | Ga0213875_10000563 | 3300021388 | Bacteria | 30193 |
| 71 | Ga0207656_10017517 | 3300025321 | Bacteria | 2808 |
| 72 | Ga0207692_10000994 | 3300025898 | Bacteria | 10350 |
| 73 | Ga0207692_10017346 | 3300025898 | Bacteria | 3209 |
| 74 | Ga0207688_10002776 | 3300025901 | Bacteria | 9495 |
| 75 | Ga0207685_10001527 | 3300025905 | Bacteria | 4899 |
| 76 | Ga0207699_10001301 | 3300025906 | Bacteria | 11864 |
| 77 | Ga0207699_10009193 | 3300025906 | Bacteria | 4910 |
| 78 | Ga0207684_10119252 | 3300025910 | Bacteria | 2261 |
| 79 | Ga0207693_10003325 | 3300025915 | Bacteria | 13761 |
| 80 | Ga0207693_10009494 | 3300025915 | Bacteria | 7922 |
| 81 | Ga0207693_10031194 | 3300025915 | Bacteria | 4211 |
| 82 | Ga0207663_10013618 | 3300025916 | Bacteria | 4425 |
| 83 | Ga0207663_10043274 | 3300025916 | Bacteria | 2756 |
| 84 | Ga0207662_10008726 | 3300025918 | Bacteria | 5560 |
| 85 | Ga0207662_10033120 | 3300025918 | Bacteria | 3010 |
| 86 | Ga0207657_10005949 | 3300025919 | Bacteria | 12696 |
| 87 | Ga0207646_10045796 | 3300025922 | Bacteria | 3925 |
| 88 | Ga0207646_10064136 | 3300025922 | Bacteria | 3279 |
| 89 | Ga0207681_10045893 | 3300025923 | Bacteria | 2937 |
| 90 | Ga0207687_10005252 | 3300025927 | Bacteria | 8589 |
| 91 | Ga0207700_10001082 | 3300025928 | Bacteria | 15685 |
| 92 | Ga0207700_10016612 | 3300025928 | Bacteria | 4894 |
| 93 | Ga0207700_10017029 | 3300025928 | Bacteria | 4842 |
| 94 | Ga0207664_10012987 | 3300025929 | Bacteria | 5967 |
| 95 | Ga0207644_10130408 | 3300025931 | Bacteria | 1924 |
| 96 | Ga0207706_10004054 | 3300025933 | Bacteria | 13855 |
| 97 | Ga0207704_10110348 | 3300025938 | Bacteria | 1858 |
| 98 | Ga0207665_10001613 | 3300025939 | Bacteria | 15217 |
| 99 | Ga0207665_10006348 | 3300025939 | Bacteria | 7839 |
| 100 | Ga0207665_10013672 | 3300025939 | Bacteria | 5339 |
| 101 | Ga0207665_10130069 | 3300025939 | Bacteria | 1786 |
| 102 | Ga0207689_10052387 | 3300025942 | Bacteria | 3363 |
| 103 | Ga0207689_10057673 | 3300025942 | Bacteria | 3194 |
| 104 | Ga0207667_10016810 | 3300025949 | Bacteria | 8253 |
| 105 | Ga0207712_10026866 | 3300025961 | Bacteria | 3840 |
| 106 | Ga0207640_10055471 | 3300025981 | Bacteria | 2596 |
| 107 | Ga0207658_10089438 | 3300025986 | Bacteria | 2384 |
| 108 | Ga0207677_10022489 | 3300026023 | Bacteria | 3876 |
| 109 | Ga0207678_10000823 | 3300026067 | Bacteria | 28436 |
| 110 | Ga0207678_10273042 | 3300026067 | Bacteria | 1450 |
| 111 | Ga0207708_10097722 | 3300026075 | Bacteria | 2269 |
| 112 | Ga0207641_10079707 | 3300026088 | Bacteria | 2839 |
| 113 | Ga0207648_10053732 | 3300026089 | Bacteria | 3520 |
| 114 | Ga0207676_10109172 | 3300026095 | Bacteria | 2311 |
| 115 | Ga0207676_10242395 | 3300026095 | Bacteria | 1618 |
| 116 | Ga0207674_10012870 | 3300026116 | Bacteria | 9337 |
| 117 | Ga0207675_100070118 | 3300026118 | Bacteria | 3276 |
| 118 | Ga0207675_100290579 | 3300026118 | Bacteria | 1590 |
| 119 | Ga0207683_10019413 | 3300026121 | Bacteria | 5805 |
| 120 | Ga0207683_10176180 | 3300026121 | Bacteria | 1938 |
| 121 | Ga0207698_10250699 | 3300026142 | Bacteria | 1620 |
| 122 | Ga0209974_10008172 | 3300027876 | Bacteria | 3582 |
| 123 | Ga0207428_10099028 | 3300027907 | Bacteria | 2255 |
| 124 | Ga0268266_10089805 | 3300028379 | Bacteria | 2691 |
| 125 | Ga0307515_10224703 | 3300028794 | Bacteria | 1686 |
| 126 | Ga0265340_10000654 | 3300031247 | Bacteria | 19489 |
| 127 | Ga0307513_10004768 | 3300031456 | Bacteria | 18011 |
| 128 | Ga0307513_10184667 | 3300031456 | Bacteria | 1944 |
| 129 | Ga0316576_10043764 | 3300031727 | Bacteria | 3231 |
| 130 | Ga0373932_0002230 | 3300035112 | Bacteria | 4979 |
| 131 | Ga0373939_0006672 | 3300035114 | Bacteria | 2787 |
| 132 | Ga0373953_0008925 | 3300035117 | Bacteria | 3424 |
| 133 | Ga0373943_0108629 | 3300035170 | Bacteria | 1460 |
| 134 | Ga0373924_0005034 | 3300035410 | Bacteria | 4652 |
| 135 | Ga0373931_0011569 | 3300035691 | Bacteria | 4262 |
| 136 | Ga0373947_0027482 | 3300035725 | Bacteria | 3330 |
| 137 | Ga0436364_0130866 | 3300037853 | Bacteria | 53503 |
| 138 | Ga0400488_49624 | 3300038741 | Bacteria | 3903 |
| 139 | Ga0436365_1094913 | 3300039437 | Bacteria | 3606 |
| 140 | Ga0436363_0107689 | 3300039450 | Bacteria | 3557 |
| 141 | Ga0466969_0003831 | 3300044656 | Bacteria | 7988 |
| 142 | Ga0466966_0098910 | 3300044684 | Bacteria | 1806 |
| 143 | Ga0466961_0024360 | 3300044693 | Bacteria | 3894 |
| 144 | Ga0466961_0041592 | 3300044693 | Bacteria | 2946 |
| 145 | Ga0466963_0201522 | 3300044694 | Bacteria | 1392 |
| 146 | Ga0466963_0264961 | 3300044694 | Bacteria | 1207 |
| 147 | Ga0453684_0035957 | 3300044712 | Bacteria | 6834 |
| 148 | Ga0466971_0002751 | 3300044719 | Bacteria | 7431 |
| 149 | Ga0466959_0003258 | 3300045049 | Bacteria | 10574 |
| 150 | Ga0451576_0000963 | 3300045051 | Bacteria | 53851 |
| 151 | Ga0466958_0036353 | 3300045836 | Bacteria | 2947 |
| 152 | Ga0495629_0001645 | 3300046459 | Bacteria | 17547 |
| 153 | Ga0495629_0047311 | 3300046459 | Bacteria | 3017 |
| 154 | Ga0495641_0005398 | 3300046461 | Bacteria | 8649 |
| 155 | Ga0495651_0084019 | 3300046462 | Bacteria | 2399 |
| 156 | Ga0495653_0044838 | 3300046463 | Bacteria | 3430 |
| 157 | Ga0495650_0035913 | 3300046471 | Bacteria | 2176 |
| 158 | Ga0495582_0066823 | 3300046473 | Bacteria | 1986 |
| 159 | Ga0495662_0005985 | 3300046476 | Bacteria | 6081 |
| 160 | Ga0495662_0050178 | 3300046476 | Bacteria | 2014 |
| 161 | Ga0495664_0058319 | 3300046477 | Bacteria | 2296 |
| 162 | Ga0495594_0016521 | 3300046499 | Bacteria | 3889 |
| 163 | Ga0495608_0005363 | 3300046511 | Bacteria | 9158 |
| 164 | Ga0495628_0293152 | 3300046516 | Bacteria | 1205 |
| 165 | Ga0495666_0074664 | 3300046526 | Bacteria | 1608 |
| 166 | Ga0495665_0004051 | 3300046531 | Bacteria | 7909 |
| 167 | Ga0495586_0083114 | 3300046535 | Bacteria | 1761 |
| 168 | Ga0495645_0093576 | 3300046543 | Bacteria | 2144 |
| 169 | Ga0495634_0013317 | 3300046642 | Bacteria | 5943 |
| 170 | Ga0495635_0038963 | 3300046663 | Bacteria | 3290 |
| 171 | Ga0495657_0037331 | 3300046675 | Bacteria | 3349 |
| 172 | Ga0495599_0070864 | 3300046678 | Bacteria | 2175 |
| 173 | Ga0495646_0045553 | 3300046680 | Bacteria | 2678 |
| 174 | Ga0495646_0092825 | 3300046680 | Bacteria | 1740 |
| 175 | Ga0495613_0005096 | 3300046689 | Bacteria | 9846 |
| 176 | Ga0495581_0005006 | 3300047315 | Bacteria | 7676 |
| 177 | Ga0495604_0016029 | 3300047317 | Bacteria | 5985 |
| 178 | Ga0495672_0130038 | 3300047320 | Bacteria | 1326 |
| 179 | Ga0495680_0027351 | 3300047322 | Bacteria | 4688 |
| 180 | Ga0495681_0085501 | 3300047470 | Bacteria | 1401 |
| 181 | Ga0495593_0005230 | 3300047673 | Bacteria | 7668 |
| 182 | Ga0495602_0115931 | 3300048088 | Bacteria | 2165 |
| 183 | Ga0495614_0017352 | 3300048089 | Bacteria | 3128 |
| 184 | Ga0496101_0019415 | 3300048904 | Bacteria | 4640 |
| 185 | Ga0496104_0000804 | 3300048907 | Bacteria | 27002 |
| 186 | Ga0496105_0006415 | 3300048908 | Bacteria | 9043 |
| 187 | Ga0496105_0117614 | 3300048908 | Bacteria | 2192 |
| 188 | Ga0496107_0013766 | 3300048910 | Bacteria | 5656 |
| 189 | Ga0496108_0003250 | 3300048911 | Bacteria | 13061 |
| 190 | Ga0496108_0072030 | 3300048911 | Bacteria | 2916 |
| 191 | Ga0496108_0085389 | 3300048911 | Bacteria | 2679 |
| 192 | Ga0496109_0012649 | 3300048912 | Bacteria | 7290 |
| 193 | Ga0496109_0086216 | 3300048912 | Bacteria | 2899 |
| 194 | Ga0496109_0169292 | 3300048912 | Bacteria | 2049 |
| 195 | Ga0496110_0070993 | 3300048913 | Bacteria | 3086 |
| 196 | Ga0496111_0038391 | 3300048914 | Bacteria | 3431 |
| 197 | Ga0496112_0021499 | 3300048915 | Bacteria | 6138 |
| 198 | Ga0496113_0018530 | 3300048916 | Bacteria | 4851 |
| 199 | Ga0496114_0171235 | 3300048917 | Bacteria | 1892 |
| 200 | Ga0496114_0194642 | 3300048917 | Bacteria | 1774 |
| 201 | Ga0496115_0016942 | 3300048918 | Bacteria | 5559 |
| 202 | Ga0501310_000001 | 3300049130 | Bacteria | 30183 |
| 203 | Ga0501036_0015987 | 3300049572 | Bacteria | 6268 |
| 204 | Ga0501039_0008039 | 3300049575 | Bacteria | 8036 |
| 205 | Ga0501040_0032255 | 3300049576 | Bacteria | 3545 |
| 206 | Ga0501040_0258627 | 3300049576 | Bacteria | 1242 |
| 207 | Ga0501042_0009133 | 3300049578 | Bacteria | 6592 |
| 208 | Ga0501042_0217919 | 3300049578 | Bacteria | 1376 |
| 209 | Ga0501043_0114307 | 3300049579 | Bacteria | 2119 |
| 210 | Ga0501048_0242218 | 3300049582 | Bacteria | 1280 |
| 211 | Ga0501048_0270818 | 3300049582 | Bacteria | 1207 |
| 212 | Ga0501075_0006641 | 3300049591 | Bacteria | 7975 |
| 213 | Ga0501075_0026217 | 3300049591 | Bacteria | 4288 |
| 214 | Ga0501076_0037993 | 3300049592 | Bacteria | 3778 |
| 215 | Ga0501077_0014895 | 3300049593 | Bacteria | 4888 |
| 216 | Ga0501081_0066756 | 3300049743 | Bacteria | 2502 |
| 217 | nmdc:mga0n895_47394_c1 | 3300050512 | Bacteria | 4202 |
| 218 | nmdc:mga0rr50_23753_c1 | 3300050513 | Bacteria | 4235 |
| 219 | Ga0495601_0005436 | 3300053077 | Bacteria | 7419 |
| 220 | Ga0495601_0043348 | 3300053077 | Bacteria | 2826 |
| 221 | Ga0495619_0001374 | 3300053085 | Bacteria | 16009 |
| 222 | Ga0500559_0005050 | 3300053136 | Bacteria | 6115 |
| 223 | Ga0500616_0000935 | 3300053153 | Bacteria | 31967 |
| 224 | Ga0501082_0056365 | 3300060353 | Bacteria | 3385 |
| 225 | Ga0530510_0105615 | 3300061734 | Bacteria | 2061 |
| 226 | 2586064335 | 2585427649 | Bacteria | 9053857 |
| 227 | 2686539152 | 2684623035 | Bacteria | 8032739 |
| 228 | 2776373862 | 2775506925 | Bacteria | 7237746 |
| 229 | 2795795148 | 2795385472 | Bacteria | 6627535 |
| 230 | 2816505410 | 2816332139 | Bacteria | 9138787 |
| 231 | 2863070570 | 2863067949 | Bacteria | 8541735 |
| 232 | 2883825167 | 2883821847 | Bacteria | 5121194 |
| 233 | 2895890822 | 2895880812 | Bacteria | 11255272 |
| 234 | 2899364404 | 2899359706 | Bacteria | 10940472 |
| 235 | 2974318047 | 2974315732 | Bacteria | 4602776 |
| 236 | 2984526264 | 2984523437 | Bacteria | 4508481 |
| 237 | 8054479111 | 8054472261 | Bacteria | 7464355 |
| 238 | Ga0316579_10000010 | |||
| 239 | JGI25406J46586_10041654 | |||
| 240 | JGI25406J46586_10042884 | |||
| 241 | Ga0070676_10075566 | |||
| 242 | Ga0068869_100022196 | |||
| 243 | Ga0070682_100053405 | |||
| 244 | Ga0070682_100126682 | |||
| 245 | Ga0068868_100011827 | |||
| 246 | Ga0068868_100013505 | |||
| 247 | Ga0070689_100072458 | |||
| 248 | Ga0070669_100024391 | |||
| 249 | Ga0070674_100024672 | |||
| 250 | Ga0070688_100020857 | |||
| 251 | Ga0070709_10002090 | |||
| 252 | Ga0070714_100046718 | |||
| 253 | Ga0070713_100084972 | |||
| 254 | Ga0070713_100106625 | |||
| 255 | Ga0070710_10001687 | |||
| 256 | Ga0070711_100008846 | |||
| 257 | Ga0070705_100011671 | |||
| 258 | Ga0070663_100130143 | |||
| 259 | Ga0070662_100008833 | |||
| 260 | Ga0070706_100158901 | |||
| 261 | Ga0070707_100042603 | |||
| 262 | Ga0070698_100017241 | |||
| 263 | Ga0070698_100040885 | |||
| 264 | Ga0070699_100002603 | |||
| 265 | Ga0070699_100140705 | |||
| 266 | Ga0070697_100035867 | |||
| 267 | Ga0070697_100097872 | |||
| 268 | Ga0070693_100135640 | |||
| 269 | Ga0070665_100148152 | |||
| 270 | Ga0070665_100313053 | |||
| 271 | Ga0070704_100026699 | |||
| 272 | Ga0068855_100014538 | |||
| 273 | Ga0068855_100368417 | |||
| 274 | Ga0068854_100012606 | |||
| 275 | Ga0068852_100054355 | |||
| 276 | Ga0068859_100157554 | |||
| 277 | Ga0068861_100258193 | |||
| 278 | Ga0068851_10059276 | |||
| 279 | Ga0068863_100000632 | |||
| 280 | Ga0068863_100076406 | |||
| 281 | Ga0081540_1012431 | |||
| 282 | Ga0081539_10001314 | |||
| 283 | Ga0070717_10012993 | |||
| 284 | Ga0070717_10088475 | |||
| 285 | Ga0070716_100003467 | |||
| 286 | Ga0070716_100028793 | |||
| 287 | Ga0070712_100063287 | |||
| 288 | Ga0097621_100134790 | |||
| 289 | Ga0075436_100011461 | |||
| 290 | Ga0097620_100157559 | |||
| 291 | Ga0111539_10066275 | |||
| 292 | Ga0105245_10009569 | |||
| 293 | Ga0105245_10077600 | |||
| 294 | Ga0105243_10027898 | |||
| 295 | Ga0105243_10197631 | |||
| 296 | Ga0105249_10000691 | |||
| 297 | Ga0105249_10060044 | |||
| 298 | Ga0105239_10036569 | |||
| 299 | Ga0163162_10064691 | |||
| 300 | Ga0157372_10157627 | |||
| 301 | Ga0163163_10015858 | |||
| 302 | Ga0163163_10201104 | |||
| 303 | Ga0163163_10288479 | |||
| 304 | Ga0157379_10164258 | |||
| 305 | Ga0157376_10090693 | |||
| 306 | Ga0163161_10001904 | |||
| 307 | Ga0213875_10000563 | |||
| 308 | Ga0207656_10017517 | |||
| 309 | Ga0207692_10000994 | |||
| 310 | Ga0207692_10017346 | |||
| 311 | Ga0207688_10002776 | |||
| 312 | Ga0207685_10001527 | |||
| 313 | Ga0207699_10001301 | |||
| 314 | Ga0207699_10009193 | |||
| 315 | Ga0207684_10119252 | |||
| 316 | Ga0207693_10003325 | |||
| 317 | Ga0207693_10009494 | |||
| 318 | Ga0207693_10031194 | |||
| 319 | Ga0207663_10013618 | |||
| 320 | Ga0207663_10043274 | |||
| 321 | Ga0207662_10008726 | |||
| 322 | Ga0207662_10033120 | |||
| 323 | Ga0207657_10005949 | |||
| 324 | Ga0207646_10045796 | |||
| 325 | Ga0207646_10064136 | |||
| 326 | Ga0207681_10045893 | |||
| 327 | Ga0207687_10005252 | |||
| 328 | Ga0207700_10001082 | |||
| 329 | Ga0207700_10016612 | |||
| 330 | Ga0207700_10017029 | |||
| 331 | Ga0207664_10012987 | |||
| 332 | Ga0207644_10130408 | |||
| 333 | Ga0207706_10004054 | |||
| 334 | Ga0207704_10110348 | |||
| 335 | Ga0207665_10001613 | |||
| 336 | Ga0207665_10006348 | |||
| 337 | Ga0207665_10013672 | |||
| 338 | Ga0207665_10130069 | |||
| 339 | Ga0207689_10052387 | |||
| 340 | Ga0207689_10057673 | |||
| 341 | Ga0207667_10016810 | |||
| 342 | Ga0207712_10026866 | |||
| 343 | Ga0207640_10055471 | |||
| 344 | Ga0207658_10089438 | |||
| 345 | Ga0207677_10022489 | |||
| 346 | Ga0207678_10000823 | |||
| 347 | Ga0207678_10273042 | |||
| 348 | Ga0207708_10097722 | |||
| 349 | Ga0207641_10079707 | |||
| 350 | Ga0207648_10053732 | |||
| 351 | Ga0207676_10109172 | |||
| 352 | Ga0207676_10242395 | |||
| 353 | Ga0207674_10012870 | |||
| 354 | Ga0207675_100070118 | |||
| 355 | Ga0207675_100290579 | |||
| 356 | Ga0207683_10019413 | |||
| 357 | Ga0207683_10176180 | |||
| 358 | Ga0207698_10250699 | |||
| 359 | Ga0209974_10008172 | |||
| 360 | Ga0207428_10099028 | |||
| 361 | Ga0268266_10089805 | |||
| 362 | Ga0307515_10224703 | |||
| 363 | Ga0265340_10000654 | |||
| 364 | Ga0307513_10004768 | |||
| 365 | Ga0307513_10184667 | |||
| 366 | Ga0316576_10043764 | |||
| 367 | Ga0373932_0002230 | |||
| 368 | Ga0373939_0006672 | |||
| 369 | Ga0373953_0008925 | |||
| 370 | Ga0373943_0108629 | |||
| 371 | Ga0373924_0005034 | |||
| 372 | Ga0373931_0011569 | |||
| 373 | Ga0373947_0027482 | |||
| 374 | Ga0436364_0130866 | |||
| 375 | Ga0400488_49624 | |||
| 376 | Ga0436365_1094913 | |||
| 377 | Ga0436363_0107689 | |||
| 378 | Ga0466969_0003831 | |||
| 379 | Ga0466966_0098910 | |||
| 380 | Ga0466961_0024360 | |||
| 381 | Ga0466961_0041592 | |||
| 382 | Ga0466963_0201522 | |||
| 383 | Ga0466963_0264961 | |||
| 384 | Ga0453684_0035957 | |||
| 385 | Ga0466971_0002751 | |||
| 386 | Ga0466959_0003258 | |||
| 387 | Ga0451576_0000963 | |||
| 388 | Ga0466958_0036353 | |||
| 389 | Ga0495629_0001645 | |||
| 390 | Ga0495629_0047311 | |||
| 391 | Ga0495641_0005398 | |||
| 392 | Ga0495651_0084019 | |||
| 393 | Ga0495653_0044838 | |||
| 394 | Ga0495650_0035913 | |||
| 395 | Ga0495582_0066823 | |||
| 396 | Ga0495662_0005985 | |||
| 397 | Ga0495662_0050178 | |||
| 398 | Ga0495664_0058319 | |||
| 399 | Ga0495594_0016521 | |||
| 400 | Ga0495608_0005363 | |||
| 401 | Ga0495628_0293152 | |||
| 402 | Ga0495666_0074664 | |||
| 403 | Ga0495665_0004051 | |||
| 404 | Ga0495586_0083114 | |||
| 405 | Ga0495645_0093576 | |||
| 406 | Ga0495634_0013317 | |||
| 407 | Ga0495635_0038963 | |||
| 408 | Ga0495657_0037331 | |||
| 409 | Ga0495599_0070864 | |||
| 410 | Ga0495646_0045553 | |||
| 411 | Ga0495646_0092825 | |||
| 412 | Ga0495613_0005096 | |||
| 413 | Ga0495581_0005006 | |||
| 414 | Ga0495604_0016029 | |||
| 415 | Ga0495672_0130038 | |||
| 416 | Ga0495680_0027351 | |||
| 417 | Ga0495681_0085501 | |||
| 418 | Ga0495593_0005230 | |||
| 419 | Ga0495602_0115931 | |||
| 420 | Ga0495614_0017352 | |||
| 421 | Ga0496101_0019415 | |||
| 422 | Ga0496104_0000804 | |||
| 423 | Ga0496105_0006415 | |||
| 424 | Ga0496105_0117614 | |||
| 425 | Ga0496107_0013766 | |||
| 426 | Ga0496108_0003250 | |||
| 427 | Ga0496108_0072030 | |||
| 428 | Ga0496108_0085389 | |||
| 429 | Ga0496109_0012649 | |||
| 430 | Ga0496109_0086216 | |||
| 431 | Ga0496109_0169292 | |||
| 432 | Ga0496110_0070993 | |||
| 433 | Ga0496111_0038391 | |||
| 434 | Ga0496112_0021499 | |||
| 435 | Ga0496113_0018530 | |||
| 436 | Ga0496114_0171235 | |||
| 437 | Ga0496114_0194642 | |||
| 438 | Ga0496115_0016942 | |||
| 439 | Ga0501310_000001 | |||
| 440 | Ga0501036_0015987 | |||
| 441 | Ga0501039_0008039 | |||
| 442 | Ga0501040_0032255 | |||
| 443 | Ga0501040_0258627 | |||
| 444 | Ga0501042_0009133 | |||
| 445 | Ga0501042_0217919 | |||
| 446 | Ga0501043_0114307 | |||
| 447 | Ga0501048_0242218 | |||
| 448 | Ga0501048_0270818 | |||
| 449 | Ga0501075_0006641 | |||
| 450 | Ga0501075_0026217 | |||
| 451 | Ga0501076_0037993 | |||
| 452 | Ga0501077_0014895 | |||
| 453 | Ga0501081_0066756 | |||
| 454 | nmdc:mga0n895_47394_c1 | |||
| 455 | nmdc:mga0rr50_23753_c1 | |||
| 456 | Ga0495601_0005436 | |||
| 457 | Ga0495601_0043348 | |||
| 458 | Ga0495619_0001374 | |||
| 459 | Ga0500559_0005050 | |||
| 460 | Ga0500616_0000935 | |||
| 461 | Ga0501082_0056365 | |||
| 462 | Ga0530510_0105615 | |||
| 463 | 2586064335 | |||
| 464 | 2686539152 | |||
| 465 | 2776373862 | |||
| 466 | 2795795148 | |||
| 467 | 2816505410 | |||
| 468 | 2863070570 | |||
| 469 | 2883825167 | |||
| 470 | 2895890822 | |||
| 471 | 2899364404 | |||
| 472 | 2974318047 | |||
| 473 | 2984526264 | |||
| 474 | 8054479111 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6to4-assembly1.cif.gz_D | imine reductase from myxococcus stipitatus in complex with nadp+ | 0.7143 | 156 | 201 |
| 1v8g-assembly1.cif.gz_A | crystal structure of anthranilate phosphoribosyltransferase (trpd) from thermus thermophilus hb8 | 0.711 | 38 | 258 |
| 4owv-assembly1.cif.gz_A | anthranilate phosphoribosyl transferase from mycobacterium tuberculosis in complex with anthranilate | 0.6906 | 3 | 258 |
| 4ztv-assembly1.cif.gz_A | non-anthranilate-like inhibitor (tamu-a7) complexed with anthranilate phosphoribosyltransferase (trpd) from mycobacterium tuberculosis in absence of prpp | 0.6877 | 5 | 258 |
| 1vqu-assembly1.cif.gz_A | crystal structure of anthranilate phosphoribosyltransferase 2 (17130499) from nostoc sp. at 1.85 a resolution | 0.6747 | 38 | 258 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WFS1_73_326_3.40.1030.10 | Alpha Beta;3-Layer(aba) Sandwich;Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2;Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.9593 | 32 | 258 | 3.40.1030.10 |
| af_Q2FWC1_336_423_3.90.1170.30 | Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Pyrimidine nucleoside phosphorylase-like, C-terminal domain | 0.9402 | 267 | 352 | 3.90.1170.30 |
| 4eadA02 | Alpha Beta;3-Layer(aba) Sandwich;Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2;Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.9338 | 36 | 258 | 3.40.1030.10 |
| af_P9WFS1_327_421_3.90.1170.30 | Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Pyrimidine nucleoside phosphorylase-like, C-terminal domain | 0.9195 | 265 | 361 | 3.90.1170.30 |
| af_P9WFS1_327_421_3.90.1170.30 | Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Pyrimidine nucleoside phosphorylase-like, C-terminal domain | 0.9103 | 265 | 361 | 3.90.1170.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7G3DCB3-F1-model_v4 | deleted | 0.9762 | 142 | 258 |
|
| AF-A0A269XDI8-F1-model_v4 | Thymidine phosphorylase | 0.9576 | 260 | 332 |
GO:0004645
GO:0005829 GO:0006206 GO:0006213 GO:0009032 |
| AF-A0A7G3DCB3-F1-model_v4 | deleted | 0.9522 | 142 | 258 |
|
| AF-A0A353N5R4-F1-model_v4 | Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) | 0.9516 | 41 | 229 |
GO:0004645
GO:0005829 GO:0006206 GO:0009032 GO:0047847 |
| AF-A0A269XDI8-F1-model_v4 | Thymidine phosphorylase | 0.9452 | 260 | 332 |
GO:0004645
GO:0005829 GO:0006206 GO:0006213 GO:0009032 |