F349414

General Info

Members Datasets Scaffolds Average Seq Length
236 157 236 263

Family's Representative Sequence

Representative Sequence 3300048911|Ga0496108_0223701|Ga0496108_0223701_253_1185
Length 310
Sequence MVTVTFLALGESRCTGSAAAVQMRRCRRHDVLYWPTGESTKGALRVQETLGIAGSGAIACGLAATAAQHGDVLLWARSEASAERARGAVAKWCGKLSEDPIAERVTVVSALGELAPASFLVEAVAEDHATKAGVLSELGRFCAEDAVLATTTSSLSVAALAQESGRAQRFVGLHVFNPVPKMALVELAYAPEATDDVRERARELCATLGKTAVEVPDIRGFVVNRLLFPYLFSAVELIEQTGLAPAAVDECMRLGAGHPMGPLALLDYVGLDVSKAIGEAIETPIPTTVQELVAAGHLGKKTGKGFHDYA

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
62 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
63 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
64 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
69 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
84 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
85 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
86 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
92 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
93 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
94 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
95 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
98 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
99 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
100 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
101 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
102 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
134 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
150 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
151 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
152 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
153 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
154 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.42
Nodule 0
Rhizoplane 9.75
Rhizosphere 87.71
Stem 0
Stem Tuber 0
Unclassified 2.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10008431 3300003203 Bacteria 4669
2 Ga0070683_100227904 3300005329 Bacteria 1771
3 Ga0070683_100357272 3300005329 Bacteria 1391
4 Ga0070682_100294862 3300005337 Bacteria 1187
5 Ga0070660_100015538 3300005339 Bacteria 5501
6 Ga0070660_100101941 3300005339 Bacteria 2275
7 Ga0070692_10011204 3300005345 Bacteria 4111
8 Ga0070692_10100539 3300005345 Bacteria 1584
9 Ga0070692_10282743 3300005345 Bacteria 1006
10 Ga0070669_100001025 3300005353 Bacteria 20352
11 Ga0070659_100000026 3300005366 Bacteria 143542
12 Ga0070659_100184801 3300005366 Bacteria 1711
13 Ga0070709_10082584 3300005434 Bacteria 2099
14 Ga0070714_100000315 3300005435 Bacteria 36636
15 Ga0070714_100050822 3300005435 Bacteria 3533
16 Ga0070713_100055610 3300005436 Bacteria 3289
17 Ga0070710_10000008 3300005437 Bacteria 198148
18 Ga0070710_10006809 3300005437 Bacteria 5512
19 Ga0070711_100047478 3300005439 Bacteria 2932
20 Ga0070679_100045193 3300005530 Bacteria 4389
21 Ga0070679_100414226 3300005530 Bacteria 1293
22 Ga0070684_100350720 3300005535 Bacteria 1357
23 Ga0070672_100647530 3300005543 Bacteria 923
24 Ga0070664_100447418 3300005564 Bacteria 1186
25 Ga0068856_100406184 3300005614 Bacteria 1382
26 Ga0070702_100104948 3300005615 Bacteria 1741
27 Ga0068852_100407557 3300005616 Unclassified 1338
28 Ga0068864_100261997 3300005618 Bacteria 1608
29 Ga0081455_10044895 3300005937 Bacteria 3850
30 Ga0081538_10024828 3300005981 Bacteria 4254
31 Ga0081538_10053125 3300005981 Bacteria 2412
32 Ga0081538_10067759 3300005981 Bacteria 1990
33 Ga0081540_1000314 3300005983 Bacteria 50231
34 Ga0081539_10001430 3300005985 Bacteria 40918
35 Ga0081539_10035466 3300005985 Bacteria 2997
36 Ga0070717_10000004 3300006028 Bacteria 365525
37 Ga0070717_10244166 3300006028 Bacteria 1584
38 Ga0070716_100377609 3300006173 Bacteria 1012
39 Ga0070712_100000153 3300006175 Bacteria 36937
40 Ga0070712_100004759 3300006175 Bacteria 8390
41 Ga0070712_100262661 3300006175 Bacteria 1384
42 Ga0075428_100474765 3300006844 Bacteria 1339
43 Ga0075431_100270314 3300006847 Bacteria 1723
44 Ga0075434_100305986 3300006871 Bacteria 1610
45 Ga0075429_100040337 3300006880 Bacteria 4064
46 Ga0105240_10025096 3300009093 Bacteria 7843
47 Ga0105243_10472592 3300009148 Bacteria 1181
48 Ga0105237_10368321 3300009545 Bacteria 1442
49 Ga0105249_10229341 3300009553 Bacteria 1831
50 Ga0105239_10250626 3300010375 Bacteria 1988
51 Ga0105246_10014544 3300011119 Bacteria 4950
52 Ga0213876_10003870 3300021384 Bacteria 8460
53 Ga0207692_10000006 3300025898 Bacteria 294686
54 Ga0207699_10028449 3300025906 Bacteria 3107
55 Ga0207643_10207759 3300025908 Bacteria 1194
56 Ga0207695_10217630 3300025913 Bacteria 1818
57 Ga0207693_10000487 3300025915 Bacteria 35985
58 Ga0207693_10288515 3300025915 Bacteria 1286
59 Ga0207663_10000471 3300025916 Bacteria 17478
60 Ga0207663_10017908 3300025916 Bacteria 3957
61 Ga0207660_10123634 3300025917 Bacteria 1963
62 Ga0207662_10071448 3300025918 Bacteria 2102
63 Ga0207657_10005717 3300025919 Bacteria 12974
64 Ga0207652_10073964 3300025921 Bacteria 2966
65 Ga0207700_10097057 3300025928 Bacteria 2342
66 Ga0207664_10000006 3300025929 Bacteria 408702
67 Ga0207664_10045193 3300025929 Bacteria 3452
68 Ga0207664_10047942 3300025929 Bacteria 3358
69 Ga0207664_10105694 3300025929 Bacteria 2333
70 Ga0207690_10000098 3300025932 Bacteria 71853
71 Ga0207661_10173462 3300025944 Bacteria 1878
72 Ga0207679_10193463 3300025945 Bacteria 1693
73 Ga0207712_10305726 3300025961 Bacteria 1307
74 Ga0207703_10214683 3300026035 Bacteria 1717
75 Ga0207639_10181872 3300026041 Bacteria 1789
76 Ga0207678_10484893 3300026067 Bacteria 1077
77 Ga0207678_10595671 3300026067 Bacteria 969
78 Ga0207708_10106933 3300026075 Bacteria 2170
79 Ga0207675_100077042 3300026118 Bacteria 3123
80 Ga0207698_10185914 3300026142 Bacteria 1846
81 Ga0265326_10000010 3300028558 Bacteria 184218
82 Ga0265319_1000862 3300028563 Bacteria 19267
83 Ga0265334_10000003 3300028573 Bacteria 244354
84 Ga0265336_10008095 3300028666 Bacteria 3703
85 Ga0265338_10016133 3300028800 Bacteria 8149
86 Ga0265324_10006034 3300029957 Bacteria 5120
87 Ga0265327_10075682 3300031251 Bacteria 1674
88 Ga0307405_10008841 3300031731 Bacteria 5133
89 Ga0307405_10040568 3300031731 Bacteria 2820
90 Ga0307413_10129001 3300031824 Bacteria 1727
91 Ga0307413_10218368 3300031824 Bacteria 1390
92 Ga0307410_10007938 3300031852 Bacteria 5851
93 Ga0307406_10018753 3300031901 Bacteria 4048
94 Ga0307406_10092895 3300031901 Bacteria 2036
95 Ga0307407_10007188 3300031903 Bacteria 5024
96 Ga0307407_10338560 3300031903 Bacteria 1061
97 Ga0307412_10418312 3300031911 Bacteria 1096
98 Ga0307409_100007640 3300031995 Bacteria 6486
99 Ga0307409_100130000 3300031995 Bacteria 2150
100 Ga0307409_100159987 3300031995 Bacteria 1968
101 Ga0307409_100221585 3300031995 Bacteria 1708
102 Ga0307416_100139641 3300032002 Bacteria 2199
103 Ga0307416_100218138 3300032002 Bacteria 1827
104 Ga0307416_100586827 3300032002 Bacteria 1192
105 Ga0307416_100848554 3300032002 Bacteria 1011
106 Ga0307411_10330289 3300032005 Bacteria 1235
107 Ga0307415_100003458 3300032126 Bacteria 8040
108 Ga0307415_100065807 3300032126 Bacteria 2527
109 Ga0307415_100138081 3300032126 Bacteria 1857
110 Ga0307415_100408653 3300032126 Bacteria 1161
111 Ga0373937_0024051 3300036401 Bacteria 5492
112 Ga0395900_0557362 3300037418 Bacteria 1090
113 Ga0395898_0109902 3300037466 Bacteria 2643
114 Ga0395898_0422883 3300037466 Bacteria 1270
115 Ga0436364_0423213 3300037853 Bacteria 2909
116 Ga0436364_0710007 3300037853 Bacteria 2931
117 Ga0395901_0365138 3300038443 Bacteria 1488
118 Ga0466966_0081326 3300044684 Bacteria 2017
119 Ga0466966_0223164 3300044684 Bacteria 1137
120 Ga0466961_0060443 3300044693 Bacteria 2410
121 Ga0466961_0095274 3300044693 Bacteria 1877
122 Ga0466963_0033907 3300044694 Bacteria 3319
123 Ga0466963_0188481 3300044694 Bacteria 1441
124 Ga0466963_0313624 3300044694 Bacteria 1103
125 Ga0466963_0407918 3300044694 Bacteria 958
126 Ga0466968_0079140 3300044735 Bacteria 1442
127 Ga0466959_0041233 3300045049 Bacteria 3408
128 Ga0466959_0042371 3300045049 Bacteria 3358
129 Ga0466959_0233711 3300045049 Bacteria 1272
130 Ga0466958_0099134 3300045836 Bacteria 1810
131 Ga0466967_0028328 3300045976 Bacteria 4675
132 Ga0466967_0032903 3300045976 Bacteria 4384
133 Ga0466967_0302376 3300045976 Bacteria 1539
134 Ga0466967_0450144 3300045976 Bacteria 1258
135 Ga0466967_0505768 3300045976 Bacteria 1186
136 Ga0495653_0000551 3300046463 Bacteria 28652
137 Ga0495650_0000035 3300046471 Bacteria 403799
138 Ga0495664_0162309 3300046477 Bacteria 1356
139 Ga0495608_0005846 3300046511 Bacteria 8758
140 Ga0495618_0000076 3300046514 Bacteria 69851
141 Ga0495618_0037394 3300046514 Bacteria 3048
142 Ga0495628_0095558 3300046516 Bacteria 2296
143 Ga0495652_0055543 3300046529 Bacteria 3367
144 Ga0495645_0003999 3300046543 Bacteria 10064
145 Ga0495667_0003437 3300046559 Bacteria 10622
146 Ga0495588_0086975 3300046674 Bacteria 1635
147 Ga0495623_0156494 3300046679 Bacteria 1343
148 Ga0495613_0352730 3300046689 Bacteria 1010
149 Ga0495674_0448883 3300047319 Bacteria 1036
150 Ga0495675_0165805 3300047444 Bacteria 1359
151 Ga0495602_0034546 3300048088 Bacteria 4729
152 Ga0496100_0001334 3300048903 Bacteria 12081
153 Ga0496101_0003871 3300048904 Bacteria 9354
154 Ga0496104_0091922 3300048907 Bacteria 2901
155 Ga0496105_0050696 3300048908 Bacteria 3429
156 Ga0496108_0215867 3300048911 Bacteria 1666
157 Ga0496108_0223701 3300048911 Bacteria 1635
158 Ga0496109_0003974 3300048912 Bacteria 12344
159 Ga0496109_0005743 3300048912 Bacteria 10384
160 Ga0496109_0014194 3300048912 Bacteria 6927
161 Ga0496110_0061884 3300048913 Bacteria 3304
162 Ga0496110_0127254 3300048913 Bacteria 2299
163 Ga0496111_0006654 3300048914 Bacteria 7518
164 Ga0496111_0015040 3300048914 Bacteria 5301
165 Ga0496111_0378530 3300048914 Bacteria 1047
166 Ga0496111_0409197 3300048914 Bacteria 1002
167 Ga0496112_0006149 3300048915 Bacteria 10494
168 Ga0496112_0010544 3300048915 Bacteria 8391
169 Ga0496113_0025848 3300048916 Bacteria 4191
170 Ga0496113_0031172 3300048916 Bacteria 3867
171 Ga0496113_0077588 3300048916 Bacteria 2540
172 Ga0496113_0179292 3300048916 Bacteria 1679
173 Ga0496114_0223497 3300048917 Bacteria 1653
174 Ga0496115_0003005 3300048918 Bacteria 12108
175 Ga0496121_0107024 3300048924 Bacteria 2143
176 Ga0496124_0071209 3300048927 Bacteria 2883
177 Ga0501031_0146418 3300049568 Bacteria 1543
178 Ga0501031_0248011 3300049568 Bacteria 1157
179 Ga0501032_0023231 3300049569 Bacteria 4290
180 Ga0501033_0159399 3300049570 Bacteria 1625
181 Ga0501033_0241816 3300049570 Bacteria 1280
182 Ga0501033_0319625 3300049570 Bacteria 1090
183 Ga0501036_0036244 3300049572 Bacteria 4174
184 Ga0501037_0039477 3300049573 Bacteria 3475
185 Ga0501038_0041922 3300049574 Bacteria 3989
186 Ga0501038_0099562 3300049574 Bacteria 2423
187 Ga0501039_0045928 3300049575 Bacteria 3375
188 Ga0501040_0101206 3300049576 Bacteria 2010
189 Ga0501041_0075127 3300049577 Bacteria 2077
190 Ga0501042_0007386 3300049578 Bacteria 7199
191 Ga0501042_0174957 3300049578 Bacteria 1549
192 Ga0501042_0231328 3300049578 Bacteria 1333
193 Ga0501043_0069426 3300049579 Bacteria 2767
194 Ga0501043_0160496 3300049579 Bacteria 1757
195 Ga0501046_0004061 3300049580 Bacteria 13356
196 Ga0501047_0053172 3300049581 Bacteria 3915
197 Ga0501047_0107784 3300049581 Bacteria 2667
198 Ga0501048_0024973 3300049582 Bacteria 4359
199 Ga0501048_0035948 3300049582 Bacteria 3563
200 Ga0501048_0078395 3300049582 Bacteria 2331
201 Ga0501068_0106313 3300049584 Bacteria 1742
202 Ga0501069_0094140 3300049585 Bacteria 1695
203 Ga0501071_0048592 3300049587 Bacteria 3052
204 Ga0501071_0160819 3300049587 Bacteria 1678
205 Ga0501072_0053470 3300049588 Bacteria 3180
206 Ga0501073_0009643 3300049589 Bacteria 7118
207 Ga0501074_0027293 3300049590 Bacteria 4140
208 Ga0501074_0180424 3300049590 Bacteria 1506
209 Ga0501074_0268268 3300049590 Bacteria 1213
210 Ga0501075_0130011 3300049591 Bacteria 1918
211 Ga0501076_0090544 3300049592 Bacteria 2460
212 Ga0501079_0101435 3300049741 Bacteria 2232
213 Ga0501079_0102857 3300049741 Bacteria 2215
214 Ga0501080_0020228 3300049742 Bacteria 6161
215 Ga0501080_0173989 3300049742 Bacteria 1984
216 Ga0501081_0107595 3300049743 Bacteria 1977
217 Ga0501044_0103760 3300049823 Bacteria 2858
218 Ga0501045_0093139 3300049824 Bacteria 2228
219 Ga0501045_0187251 3300049824 Bacteria 1542
220 nmdc:mga09592_37254_c1 3300050508 Bacteria 4080
221 nmdc:mga06r32_744843_c1 3300050510 Bacteria 943
222 nmdc:mga0n895_344686_c1 3300050512 Bacteria 1509
223 Ga0495601_0022393 3300053077 Bacteria 3878
224 Ga0495601_0025330 3300053077 Bacteria 3658
225 Ga0495612_0000141 3300053078 Bacteria 30417
226 Ga0495655_0067427 3300053083 Bacteria 992
227 Ga0495595_0010168 3300053084 Bacteria 3908
228 Ga0495619_0011217 3300053085 Bacteria 5637
229 Ga0500599_002618 3300053736 Bacteria 2169
230 Ga0501084_0037675 3300054114 Bacteria 4041
231 Ga0501084_0261461 3300054114 Bacteria 1461
232 Ga0501082_0110499 3300060353 Bacteria 2379
233 Ga0501082_0569614 3300060353 Bacteria 991
234 Ga0501082_0573085 3300060353 Bacteria 988
235 Ga0530510_0002985 3300061734 Bacteria 11600
236 Ga0530510_0068069 3300061734 Bacteria 2583

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049568 Ga0501031_0248011 Ga0501031_0248011_310_1044 221
2 3300049570 Ga0501033_0159399 Ga0501033_0159399_697_1431 221
3 3300049574 Ga0501038_0099562 Ga0501038_0099562_1363_2097 221
4 3300049575 Ga0501039_0045928 Ga0501039_0045928_1446_2180 221
5 3300049577 Ga0501041_0075127 Ga0501041_0075127_181_915 221
6 3300049578 Ga0501042_0231328 Ga0501042_0231328_290_1024 221
7 3300049582 Ga0501048_0078395 Ga0501048_0078395_1192_1926 221
8 3300049587 Ga0501071_0160819 Ga0501071_0160819_490_1224 221
9 3300049824 Ga0501045_0093139 Ga0501045_0093139_298_1032 221
10 3300061734 Ga0530510_0068069 Ga0530510_0068069_1321_2055 221
11 3300060353 Ga0501082_0569614 Ga0501082_0569614_92_832 223
12 3300005981 Ga0081538_10067759 Ga0081538_100677592 236
13 3300049743 Ga0501081_0107595 Ga0501081_0107595_952_1743 236
14 3300053083 Ga0495655_0067427 Ga0495655_0067427_13_828 244
15 3300053078 Ga0495612_0000141 Ga0495612_0000141_28311_29138 245
16 3300049582 Ga0501048_0035948 Ga0501048_0035948_760_1500 246
17 3300049824 Ga0501045_0187251 Ga0501045_0187251_179_919 246
18 3300031901 Ga0307406_10092895 Ga0307406_100928951 248
19 3300031903 Ga0307407_10338560 Ga0307407_103385602 248
20 3300032002 Ga0307416_100139641 Ga0307416_1001396411 248
21 3300032126 Ga0307415_100408653 Ga0307415_1004086531 248
22 3300005439 Ga0070711_100047478 Ga0070711_1000474782 251
23 3300025916 Ga0207663_10000471 Ga0207663_100004712 251
24 3300046463 Ga0495653_0000551 Ga0495653_0000551_22267_23061 252
25 3300031731 Ga0307405_10008841 Ga0307405_100088413 253
26 3300031824 Ga0307413_10218368 Ga0307413_102183682 253
27 3300031852 Ga0307410_10007938 Ga0307410_100079384 253
28 3300031901 Ga0307406_10018753 Ga0307406_100187533 253
29 3300031903 Ga0307407_10007188 Ga0307407_100071883 253
30 3300032126 Ga0307415_100003458 Ga0307415_1000034585 253
31 3300045976 Ga0466967_0032903 Ga0466967_0032903_925_1728 253
32 3300046514 Ga0495618_0000076 Ga0495618_0000076_34918_35712 253
33 3300053077 Ga0495601_0025330 Ga0495601_0025330_1546_2373 255
34 3300009093 Ga0105240_10025096 Ga0105240_100250962 256
35 3300005530 Ga0070679_100414226 Ga0070679_1004142261 257
36 3300048918 Ga0496115_0003005 Ga0496115_0003005_10578_11354 257
37 3300005981 Ga0081538_10053125 Ga0081538_100531251 259
38 3300009148 Ga0105243_10472592 Ga0105243_104725922 259
39 3300031731 Ga0307405_10040568 Ga0307405_100405682 259
40 3300031911 Ga0307412_10418312 Ga0307412_104183121 259
41 3300032002 Ga0307416_100586827 Ga0307416_1005868272 259
42 3300032002 Ga0307416_100848554 Ga0307416_1008485541 259
43 3300044684 Ga0466966_0081326 Ga0466966_0081326_52_843 259
44 3300049578 Ga0501042_0174957 Ga0501042_0174957_491_1306 259
45 3300045049 Ga0466959_0233711 Ga0466959_0233711_311_1123 260
46 3300046674 Ga0495588_0086975 Ga0495588_0086975_500_1297 260
47 3300049581 Ga0501047_0053172 Ga0501047_0053172_3046_3831 260
48 3300049823 Ga0501044_0103760 Ga0501044_0103760_2037_2822 260
49 3300005329 Ga0070683_100227904 Ga0070683_1002279042 261
50 3300005329 Ga0070683_100357272 Ga0070683_1003572721 261
51 3300005345 Ga0070692_10282743 Ga0070692_102827431 261
52 3300005535 Ga0070684_100350720 Ga0070684_1003507202 261
53 3300005937 Ga0081455_10044895 Ga0081455_100448952 261
54 3300009553 Ga0105249_10229341 Ga0105249_102293412 261
55 3300010375 Ga0105239_10250626 Ga0105239_102506262 261
56 3300025908 Ga0207643_10207759 Ga0207643_102077591 261
57 3300025918 Ga0207662_10071448 Ga0207662_100714482 261
58 3300025944 Ga0207661_10173462 Ga0207661_101734622 261
59 3300025961 Ga0207712_10305726 Ga0207712_103057262 261
60 3300026035 Ga0207703_10214683 Ga0207703_102146831 261
61 3300026075 Ga0207708_10106933 Ga0207708_101069332 261
62 3300048912 Ga0496109_0005743 Ga0496109_0005743_7759_8559 261
63 3300048914 Ga0496111_0378530 Ga0496111_0378530_232_1017 261
64 3300005337 Ga0070682_100294862 Ga0070682_1002948621 263
65 3300005345 Ga0070692_10100539 Ga0070692_101005392 263
66 3300005366 Ga0070659_100184801 Ga0070659_1001848011 263
67 3300005530 Ga0070679_100045193 Ga0070679_1000451932 263
68 3300005543 Ga0070672_100647530 Ga0070672_1006475301 263
69 3300005564 Ga0070664_100447418 Ga0070664_1004474181 263
70 3300005614 Ga0068856_100406184 Ga0068856_1004061842 263
71 3300005615 Ga0070702_100104948 Ga0070702_1001049482 263
72 3300005616 Ga0068852_100407557 Ga0068852_1004075572 263
73 3300005618 Ga0068864_100261997 Ga0068864_1002619972 263
74 3300006028 Ga0070717_10000004 Ga0070717_1000000425 263
75 3300006175 Ga0070712_100262661 Ga0070712_1002626612 263
76 3300006880 Ga0075429_100040337 Ga0075429_1000403373 263
77 3300021384 Ga0213876_10003870 Ga0213876_100038707 263
78 3300025917 Ga0207660_10123634 Ga0207660_101236342 263
79 3300025921 Ga0207652_10073964 Ga0207652_100739643 263
80 3300025945 Ga0207679_10193463 Ga0207679_101934632 263
81 3300026041 Ga0207639_10181872 Ga0207639_101818722 263
82 3300026067 Ga0207678_10484893 Ga0207678_104848932 263
83 3300026067 Ga0207678_10595671 Ga0207678_105956712 263
84 3300026118 Ga0207675_100077042 Ga0207675_1000770422 263
85 3300026142 Ga0207698_10185914 Ga0207698_101859141 263
86 3300031251 Ga0265327_10075682 Ga0265327_100756822 263
87 3300031995 Ga0307409_100221585 Ga0307409_1002215852 263
88 3300032126 Ga0307415_100138081 Ga0307415_1001380811 263
89 3300037418 Ga0395900_0557362 Ga0395900_0557362_35_829 263
90 3300037853 Ga0436364_0423213 Ga0436364_0423213_1931_2734 263
91 3300037853 Ga0436364_0710007 Ga0436364_0710007_127_924 263
92 3300044694 Ga0466963_0188481 Ga0466963_0188481_469_1308 263
93 3300044694 Ga0466963_0407918 Ga0466963_0407918_120_911 263
94 3300045049 Ga0466959_0042371 Ga0466959_0042371_2252_3046 263
95 3300045976 Ga0466967_0028328 Ga0466967_0028328_2878_3714 263
96 3300045976 Ga0466967_0302376 Ga0466967_0302376_665_1468 263
97 3300045976 Ga0466967_0505768 Ga0466967_0505768_362_1153 263
98 3300046543 Ga0495645_0003999 Ga0495645_0003999_595_1395 263
99 3300048908 Ga0496105_0050696 Ga0496105_0050696_1923_2720 263
100 3300048912 Ga0496109_0003974 Ga0496109_0003974_6822_7619 263
101 3300048913 Ga0496110_0061884 Ga0496110_0061884_247_1044 263
102 3300048914 Ga0496111_0006654 Ga0496111_0006654_2976_3773 263
103 3300048914 Ga0496111_0409197 Ga0496111_0409197_38_841 263
104 3300048915 Ga0496112_0006149 Ga0496112_0006149_3325_4119 263
105 3300048916 Ga0496113_0031172 Ga0496113_0031172_1195_1992 263
106 3300048916 Ga0496113_0179292 Ga0496113_0179292_852_1646 263
107 3300048924 Ga0496121_0107024 Ga0496121_0107024_104_895 263
108 3300049569 Ga0501032_0023231 Ga0501032_0023231_437_1231 263
109 3300049570 Ga0501033_0319625 Ga0501033_0319625_76_870 263
110 3300049573 Ga0501037_0039477 Ga0501037_0039477_542_1336 263
111 3300049574 Ga0501038_0041922 Ga0501038_0041922_1358_2152 263
112 3300049579 Ga0501043_0069426 Ga0501043_0069426_125_919 263
113 3300049580 Ga0501046_0004061 Ga0501046_0004061_667_1461 263
114 3300049582 Ga0501048_0024973 Ga0501048_0024973_355_1149 263
115 3300049584 Ga0501068_0106313 Ga0501068_0106313_235_1029 263
116 3300049585 Ga0501069_0094140 Ga0501069_0094140_352_1146 263
117 3300049589 Ga0501073_0009643 Ga0501073_0009643_3325_4119 263
118 3300049590 Ga0501074_0180424 Ga0501074_0180424_171_965 263
119 3300049741 Ga0501079_0101435 Ga0501079_0101435_188_982 263
120 3300049742 Ga0501080_0173989 Ga0501080_0173989_1062_1856 263
121 3300050508 nmdc:mga09592_37254_c1 nmdc:mga09592_37254_c1_2202_2996 263
122 3300054114 Ga0501084_0261461 Ga0501084_0261461_92_886 263
123 3300005339 Ga0070660_100101941 Ga0070660_1001019412 264
124 3300005345 Ga0070692_10011204 Ga0070692_100112044 264
125 3300005353 Ga0070669_100001025 Ga0070669_10000102519 264
126 3300005366 Ga0070659_100000026 Ga0070659_10000002644 264
127 3300005434 Ga0070709_10082584 Ga0070709_100825842 264
128 3300005435 Ga0070714_100000315 Ga0070714_10000031535 264
129 3300005435 Ga0070714_100050822 Ga0070714_1000508224 264
130 3300005436 Ga0070713_100055610 Ga0070713_1000556103 264
131 3300005437 Ga0070710_10000008 Ga0070710_10000008154 264
132 3300005437 Ga0070710_10006809 Ga0070710_100068094 264
133 3300005983 Ga0081540_1000314 Ga0081540_100031437 264
134 3300005985 Ga0081539_10035466 Ga0081539_100354662 264
135 3300006028 Ga0070717_10244166 Ga0070717_102441662 264
136 3300006173 Ga0070716_100377609 Ga0070716_1003776091 264
137 3300006175 Ga0070712_100004759 Ga0070712_1000047593 264
138 3300011119 Ga0105246_10014544 Ga0105246_100145442 264
139 3300025898 Ga0207692_10000006 Ga0207692_10000006197 264
140 3300025906 Ga0207699_10028449 Ga0207699_100284492 264
141 3300025913 Ga0207695_10217630 Ga0207695_102176303 264
142 3300025916 Ga0207663_10017908 Ga0207663_100179082 264
143 3300025929 Ga0207664_10000006 Ga0207664_10000006366 264
144 3300025929 Ga0207664_10045193 Ga0207664_100451933 264
145 3300025929 Ga0207664_10047942 Ga0207664_100479422 264
146 3300025929 Ga0207664_10105694 Ga0207664_101056941 264
147 3300025932 Ga0207690_10000098 Ga0207690_100000989 264
148 3300036401 Ga0373937_0024051 Ga0373937_0024051_3156_3956 264
149 3300037466 Ga0395898_0422883 Ga0395898_0422883_329_1129 264
150 3300044684 Ga0466966_0223164 Ga0466966_0223164_304_1101 264
151 3300044693 Ga0466961_0060443 Ga0466961_0060443_1187_1981 264
152 3300044693 Ga0466961_0095274 Ga0466961_0095274_920_1717 264
153 3300044694 Ga0466963_0033907 Ga0466963_0033907_974_1774 264
154 3300044694 Ga0466963_0313624 Ga0466963_0313624_11_814 264
155 3300044735 Ga0466968_0079140 Ga0466968_0079140_139_963 264
156 3300045049 Ga0466959_0041233 Ga0466959_0041233_1391_2185 264
157 3300045836 Ga0466958_0099134 Ga0466958_0099134_942_1739 264
158 3300045976 Ga0466967_0450144 Ga0466967_0450144_210_1010 264
159 3300046471 Ga0495650_0000035 Ga0495650_0000035_42768_43565 264
160 3300046477 Ga0495664_0162309 Ga0495664_0162309_141_941 264
161 3300046511 Ga0495608_0005846 Ga0495608_0005846_7254_8054 264
162 3300046514 Ga0495618_0037394 Ga0495618_0037394_2220_3020 264
163 3300046516 Ga0495628_0095558 Ga0495628_0095558_899_1699 264
164 3300046529 Ga0495652_0055543 Ga0495652_0055543_1924_2724 264
165 3300046559 Ga0495667_0003437 Ga0495667_0003437_1951_2751 264
166 3300046679 Ga0495623_0156494 Ga0495623_0156494_244_1044 264
167 3300046689 Ga0495613_0352730 Ga0495613_0352730_125_925 264
168 3300047319 Ga0495674_0448883 Ga0495674_0448883_221_1021 264
169 3300047444 Ga0495675_0165805 Ga0495675_0165805_147_947 264
170 3300048088 Ga0495602_0034546 Ga0495602_0034546_3463_4263 264
171 3300048903 Ga0496100_0001334 Ga0496100_0001334_386_1282 264
172 3300048904 Ga0496101_0003871 Ga0496101_0003871_8169_9065 264
173 3300048907 Ga0496104_0091922 Ga0496104_0091922_397_1197 264
174 3300048911 Ga0496108_0215867 Ga0496108_0215867_383_1183 264
175 3300048911 Ga0496108_0223701 Ga0496108_0223701_253_1185 264
176 3300048912 Ga0496109_0014194 Ga0496109_0014194_3960_4892 264
177 3300048913 Ga0496110_0127254 Ga0496110_0127254_715_1512 264
178 3300048914 Ga0496111_0015040 Ga0496111_0015040_3774_4571 264
179 3300048915 Ga0496112_0010544 Ga0496112_0010544_3753_4553 264
180 3300048916 Ga0496113_0025848 Ga0496113_0025848_2639_3439 264
181 3300048916 Ga0496113_0077588 Ga0496113_0077588_239_1036 264
182 3300048917 Ga0496114_0223497 Ga0496114_0223497_48_848 264
183 3300049581 Ga0501047_0107784 Ga0501047_0107784_15_812 264
184 3300053077 Ga0495601_0022393 Ga0495601_0022393_233_1033 264
185 3300053084 Ga0495595_0010168 Ga0495595_0010168_2342_3142 264
186 3300053085 Ga0495619_0011217 Ga0495619_0011217_4333_5133 264
187 3300003203 JGI25406J46586_10008431 JGI25406J46586_100084312 265
188 3300005339 Ga0070660_100015538 Ga0070660_1000155386 265
189 3300005981 Ga0081538_10024828 Ga0081538_100248282 265
190 3300005985 Ga0081539_10001430 Ga0081539_1000143028 265
191 3300006175 Ga0070712_100000153 Ga0070712_10000015319 265
192 3300006844 Ga0075428_100474765 Ga0075428_1004747651 265
193 3300006847 Ga0075431_100270314 Ga0075431_1002703142 265
194 3300006871 Ga0075434_100305986 Ga0075434_1003059861 265
195 3300009545 Ga0105237_10368321 Ga0105237_103683212 265
196 3300025915 Ga0207693_10000487 Ga0207693_1000048724 265
197 3300025915 Ga0207693_10288515 Ga0207693_102885152 265
198 3300025919 Ga0207657_10005717 Ga0207657_100057179 265
199 3300025928 Ga0207700_10097057 Ga0207700_100970572 265
200 3300028558 Ga0265326_10000010 Ga0265326_1000001028 265
201 3300028563 Ga0265319_1000862 Ga0265319_100086218 265
202 3300028573 Ga0265334_10000003 Ga0265334_1000000376 265
203 3300028666 Ga0265336_10008095 Ga0265336_100080953 265
204 3300028800 Ga0265338_10016133 Ga0265338_100161333 265
205 3300029957 Ga0265324_10006034 Ga0265324_100060342 265
206 3300031824 Ga0307413_10129001 Ga0307413_101290011 265
207 3300031995 Ga0307409_100007640 Ga0307409_1000076401 265
208 3300031995 Ga0307409_100130000 Ga0307409_1001300002 265
209 3300031995 Ga0307409_100159987 Ga0307409_1001599872 265
210 3300032002 Ga0307416_100218138 Ga0307416_1002181382 265
211 3300032005 Ga0307411_10330289 Ga0307411_103302891 265
212 3300032126 Ga0307415_100065807 Ga0307415_1000658072 265
213 3300037466 Ga0395898_0109902 Ga0395898_0109902_485_1327 265
214 3300038443 Ga0395901_0365138 Ga0395901_0365138_328_1125 265
215 3300048927 Ga0496124_0071209 Ga0496124_0071209_1168_1995 265
216 3300049568 Ga0501031_0146418 Ga0501031_0146418_484_1281 265
217 3300049570 Ga0501033_0241816 Ga0501033_0241816_410_1207 265
218 3300049572 Ga0501036_0036244 Ga0501036_0036244_618_1415 265
219 3300049576 Ga0501040_0101206 Ga0501040_0101206_372_1169 265
220 3300049578 Ga0501042_0007386 Ga0501042_0007386_5120_5917 265
221 3300049579 Ga0501043_0160496 Ga0501043_0160496_249_1046 265
222 3300049587 Ga0501071_0048592 Ga0501071_0048592_2227_3024 265
223 3300049588 Ga0501072_0053470 Ga0501072_0053470_2000_2797 265
224 3300049590 Ga0501074_0027293 Ga0501074_0027293_1152_1967 265
225 3300049590 Ga0501074_0268268 Ga0501074_0268268_106_903 265
226 3300049591 Ga0501075_0130011 Ga0501075_0130011_568_1365 265
227 3300049592 Ga0501076_0090544 Ga0501076_0090544_60_857 265
228 3300049741 Ga0501079_0102857 Ga0501079_0102857_1301_2098 265
229 3300049742 Ga0501080_0020228 Ga0501080_0020228_4121_4936 265
230 3300050510 nmdc:mga06r32_744843_c1 nmdc:mga06r32_744843_c1_67_864 265
231 3300050512 nmdc:mga0n895_344686_c1 nmdc:mga0n895_344686_c1_668_1483 265
232 3300053736 Ga0500599_002618 Ga0500599_002618_51_920 265
233 3300054114 Ga0501084_0037675 Ga0501084_0037675_2160_2957 265
234 3300060353 Ga0501082_0110499 Ga0501082_0110499_359_1156 265
235 3300060353 Ga0501082_0573085 Ga0501082_0573085_88_888 265
236 3300061734 Ga0530510_0002985 Ga0530510_0002985_1160_1957 265

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

49

218

0.95

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

220

309

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2wtb-assembly1.cif.gz_A arabidopsis thaliana multifuctional protein, mfp2 0.9387 1 249
6aa8-assembly1.cif.gz_F crystal structure of (s)-3-hydroxybutyryl-coenzymea dehydrogenase from clostridium acetobutylicum complexed with nad+ 0.9382 3 263
6hrd-assembly2.cif.gz_D crystal structure of m. tuberculosis fadb2 (rv0468) 0.9373 1 264
1wdl-assembly1.cif.gz_A fatty acid beta-oxidation multienzyme complex from pseudomonas fragi, form ii (native4) 0.9307 1 265
6hrd-assembly2.cif.gz_D crystal structure of m. tuberculosis fadb2 (rv0468) 0.9306 1 264
ID Description Score Start End Superfamily
af_A0A0R0JSV2_33_153_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9524 60 176 3.40.50.720
4e13A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9511 3 176 3.40.50.720
6iumB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9511 1 168 3.40.50.720
4pzeG02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9484 182 259 1.10.1040.10
af_Q4CWB6_396_583_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.945 1 175 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2W5Y578-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase 0.9888 2 265 GO:0006635
GO:0008691
GO:0070403
AF-A0A7W0LUR6-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase family protein 0.988 4 264 GO:0006631
GO:0009056
GO:0016616
GO:0070403
AF-A0A2W5Y578-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase 0.9814 2 265 GO:0006635
GO:0008691
GO:0070403
AF-A0A7W0LUR6-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase family protein 0.9802 4 264 GO:0006631
GO:0009056
GO:0016616
GO:0070403
AF-A0A109IIV8-F1-model_v4 deleted 0.9696 3 264

Feature Viewer

pLDDT pTM Quality
94.18 0.86 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map