F349357

General Info

Members Datasets Scaffolds Average Seq Length
236 165 209 681

Family's Representative Sequence

Representative Sequence 3300046474|Ga0495605_0003167|Ga0495605_0003167_6608_8812
Length 734
Sequence MWHGQRSPHGLWHVRGRFVRQIASPHPDHSERPWAVRTDLHRHLDTPLAAVRNLGILAHVDAGKTTLTERILYLTGTTHKRGEVHDGTTVTDFDPQERDRGITIFAAAVSCAWDGHRINLIDTPGHVDFSDEVARSLRVLDGAVAVFDAVAGVEPQSESVWRQADRYGVPRIAFVNKLDRAGADLDTAVESIRERLHPAPLVVQLPIGSEAGFTGVVDLLRMRSLVWPEGRDAVEEGPVPEALRDTAEGRRRQLEEAVAELHPGALEEFCAHGSLCARTLAAALRDLTRSGDGVVVLCGSAYRNRGIEPLLDAVVAYLPSPCDVPAVRGTRDGTEQERPADPAAPFAALVFKVNATATGRLTYLRVYSGTVGKGETVWDSGTGRVERIGRILRVQADRHAPLEQAVAGDIVAVVGLKSARAGSTLCAPGAPLVLEPPAVADPVVSVAVEAVGSADMDLLVSALTRLVEEDPSLVVRTDPETGQMVLSGMGELHLEVAVEKIRRAHGLDVRVGRPRVAYRETVSRGVSGLVHRHVKQDGGAGEFAHVVLDVEPLEDVPRDGAADATRFEFRSTVVGGRVPQEYVRALEAGCRDALADGPLGGHPVTGVRVVLTDGATHPKDSSERAFRTAGRFALREALRACAMVLLEPVADVTVTVPDDAVGGVLGDLAARRGQVSGSVARAGAVVITATVPLVELFGYATRLRGRTRGRGVFTARPAGYAPAPSTAPTGASAR

Samples

Sample ID Description Type Environment
1 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
2 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
3 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
4 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
5 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
6 2643221670 Streptomyces sp. Root431 Isolate Unclassified
7 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
8 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
9 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
10 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
11 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
12 2862574272 Streptomyces sp. AcE210 Isolate Nodule
13 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
14 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
15 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
16 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
17 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
18 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
19 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
20 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
21 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
22 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
23 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
24 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
25 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
26 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
41 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
47 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
48 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
49 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
50 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
51 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
52 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
53 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
54 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
55 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
56 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
59 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
60 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
61 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
64 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
65 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
66 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
67 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
68 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
69 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
70 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
71 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
77 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
78 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
79 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
80 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
84 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
85 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
86 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
87 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
88 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
89 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
95 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
96 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
102 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
103 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
104 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
105 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
106 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
107 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
108 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
109 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
110 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
111 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
112 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
113 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
114 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
115 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
119 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
120 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
121 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
122 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
123 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
124 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
125 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
126 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
127 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
128 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
129 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
157 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
158 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
159 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
160 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
161 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
162 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
163 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
164 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
165 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.56
Metatranscriptomes 0
Isolates 11.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.69
Nodule 0.42
Rhizoplane 0
Rhizosphere 83.47
Stem 0
Stem Tuber 0
Unclassified 14.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070710_10008487 3300005437 Bacteria 5001
2 Ga0070708_100000929 3300005445 Bacteria 22153
3 Ga0070708_100001716 3300005445 Bacteria 16850
4 Ga0070708_100003460 3300005445 Bacteria 12350
5 Ga0070708_100137390 3300005445 Bacteria 2265
6 Ga0070706_100001515 3300005467 Bacteria 24359
7 Ga0070706_100001725 3300005467 Bacteria 22674
8 Ga0070706_100004461 3300005467 Bacteria 13519
9 Ga0070706_100007484 3300005467 Bacteria 10238
10 Ga0070706_100008741 3300005467 Bacteria 9435
11 Ga0070707_100001328 3300005468 Bacteria 24359
12 Ga0070707_100001828 3300005468 Bacteria 20464
13 Ga0070707_100004619 3300005468 Bacteria 12884
14 Ga0070707_100010303 3300005468 Bacteria 8703
15 Ga0070707_100011027 3300005468 Bacteria 8416
16 Ga0070707_100030653 3300005468 Bacteria 5122
17 Ga0070698_100015059 3300005471 Bacteria 8176
18 Ga0070699_100000239 3300005518 Bacteria 53734
19 Ga0070699_100000685 3300005518 Bacteria 31595
20 Ga0070699_100001702 3300005518 Bacteria 20040
21 Ga0070699_100040400 3300005518 Bacteria 4039
22 Ga0070697_100002291 3300005536 Bacteria 14690
23 Ga0070717_10000007 3300006028 Bacteria 304340
24 Ga0070717_10003938 3300006028 Bacteria 10684
25 Ga0070717_10054737 3300006028 Bacteria 3291
26 Ga0070712_100063915 3300006175 Bacteria 2608
27 Ga0075433_10005065 3300006852 Bacteria 10331
28 Ga0075436_100001748 3300006914 Bacteria 14884
29 Ga0075436_100052252 3300006914 Bacteria 2820
30 Ga0099794_10000427 3300007265 Bacteria 14056
31 Ga0111539_10005514 3300009094 Bacteria 16372
32 Ga0111539_10040593 3300009094 Bacteria 5600
33 Ga0157372_10045334 3300013307 Bacteria 4877
34 Ga0213875_10000276 3300021388 Bacteria 50734
35 Ga0207653_10007851 3300025885 Bacteria 3326
36 Ga0207684_10000002 3300025910 Bacteria 1042751
37 Ga0207684_10000026 3300025910 Bacteria 316711
38 Ga0207684_10000148 3300025910 Bacteria 124604
39 Ga0207684_10000222 3300025910 Bacteria 87705
40 Ga0207684_10000231 3300025910 Bacteria 84968
41 Ga0207684_10005389 3300025910 Bacteria 11818
42 Ga0207693_10066332 3300025915 Bacteria 2826
43 Ga0207646_10000093 3300025922 Bacteria 119533
44 Ga0207646_10000394 3300025922 Bacteria 58624
45 Ga0207646_10003624 3300025922 Bacteria 17281
46 Ga0209588_1000036 3300027671 Bacteria 65612
47 Ga0207428_10035196 3300027907 Bacteria 4095
48 Ga0265337_1000075 3300028556 Bacteria 46795
49 Ga0265326_10004553 3300028558 Bacteria 4436
50 Ga0265319_1000077 3300028563 Bacteria 75962
51 Ga0265319_1000371 3300028563 Bacteria 32428
52 Ga0265334_10002004 3300028573 Bacteria 9649
53 Ga0265318_10001319 3300028577 Bacteria 14873
54 Ga0265318_10007470 3300028577 Bacteria 4939
55 Ga0265323_10000672 3300028653 Bacteria 18620
56 Ga0265322_10000375 3300028654 Bacteria 18550
57 Ga0265336_10000066 3300028666 Bacteria 95677
58 Ga0307517_10018703 3300028786 Bacteria 8942
59 Ga0307517_10026002 3300028786 Bacteria 7121
60 Ga0307515_10000146 3300028794 Bacteria 170674
61 Ga0307515_10002635 3300028794 Bacteria 38531
62 Ga0265338_10000388 3300028800 Bacteria 78700
63 Ga0265338_10000637 3300028800 Bacteria 60746
64 Ga0265338_10001977 3300028800 Bacteria 31927
65 Ga0265324_10000243 3300029957 Bacteria 41268
66 Ga0265324_10002212 3300029957 Bacteria 10169
67 Ga0265330_10000067 3300031235 Bacteria 91033
68 Ga0265332_10000513 3300031238 Bacteria 26432
69 Ga0265332_10010928 3300031238 Bacteria 4034
70 Ga0265320_10000644 3300031240 Bacteria 26646
71 Ga0265320_10000896 3300031240 Bacteria 22415
72 Ga0265325_10001585 3300031241 Bacteria 15856
73 Ga0265325_10005797 3300031241 Bacteria 7573
74 Ga0265325_10030876 3300031241 Bacteria 2872
75 Ga0265329_10001808 3300031242 Bacteria 10170
76 Ga0265340_10002647 3300031247 Bacteria 10176
77 Ga0265340_10006493 3300031247 Bacteria 6433
78 Ga0265339_10001338 3300031249 Bacteria 18425
79 Ga0265331_10000271 3300031250 Bacteria 57462
80 Ga0265316_10001501 3300031344 Bacteria 25011
81 Ga0265316_10002576 3300031344 Bacteria 18724
82 Ga0307509_10042371 3300031507 Bacteria 4933
83 Ga0265313_10000713 3300031595 Bacteria 34315
84 Ga0265313_10004830 3300031595 Bacteria 10138
85 Ga0307508_10015960 3300031616 Bacteria 6840
86 Ga0307508_10019933 3300031616 Bacteria 6093
87 Ga0307514_10002467 3300031649 Bacteria 19206
88 Ga0265314_10001618 3300031711 Bacteria 24701
89 Ga0265342_10001108 3300031712 Bacteria 25815
90 Ga0265342_10005850 3300031712 Bacteria 9285
91 Ga0316576_10056764 3300031727 Bacteria 2861
92 Ga0307516_10002346 3300031730 Bacteria 25409
93 Ga0307516_10002782 3300031730 Bacteria 23099
94 Ga0307518_10029847 3300031838 Bacteria 3946
95 Ga0307507_10047657 3300033179 Bacteria 4180
96 Ga0307510_10037824 3300033180 Bacteria 5348
97 Ga0307510_10058668 3300033180 Bacteria 3982
98 Ga0373951_0000121 3300035091 Bacteria 29306
99 Ga0373957_0010067 3300035120 Bacteria 3113
100 Ga0395905_0066270 3300037471 Bacteria 3382
101 Ga0436364_0079644 3300037853 Bacteria 315114
102 Ga0439436_0001873 3300041404 Bacteria 6204
103 Ga0439439_0004403 3300041406 Bacteria 3171
104 Ga0439449_0009376 3300042007 Bacteria 3711
105 Ga0439457_000907 3300042014 Bacteria 8943
106 Ga0439457_001720 3300042014 Bacteria 6488
107 Ga0450894_000863 3300042131 Bacteria 4843
108 Ga0450906_001519 3300042145 Bacteria 5068
109 Ga0451577_0000255 3300042876 Bacteria 105353
110 Ga0451577_0000461 3300042876 Bacteria 70795
111 Ga0466965_0003943 3300044683 Bacteria 6571
112 Ga0466965_0013740 3300044683 Bacteria 3824
113 Ga0466966_0001006 3300044684 Bacteria 17992
114 Ga0466966_0011031 3300044684 Bacteria 5998
115 Ga0466961_0001759 3300044693 Bacteria 13448
116 Ga0466961_0023125 3300044693 Bacteria 3996
117 Ga0466961_0026961 3300044693 Bacteria 3695
118 Ga0466963_0000596 3300044694 Bacteria 17242
119 Ga0453684_0000024 3300044712 Bacteria 819351
120 Ga0453684_0000100 3300044712 Bacteria 368331
121 Ga0453684_0003833 3300044712 Bacteria 33172
122 Ga0453684_0093294 3300044712 Bacteria 3708
123 Ga0466971_0000089 3300044719 Bacteria 33395
124 Ga0466970_0000682 3300044765 Bacteria 16581
125 Ga0466957_0000738 3300044842 Bacteria 16712
126 Ga0466960_0011570 3300044901 Bacteria 3697
127 Ga0466959_0000689 3300045049 Bacteria 19720
128 Ga0451576_0014129 3300045051 Bacteria 8897
129 Ga0451576_0079214 3300045051 Bacteria 3418
130 Ga0466958_0000290 3300045836 Bacteria 19609
131 Ga0495592_0005341 3300046454 Bacteria 9483
132 Ga0495603_0002232 3300046455 Bacteria 11387
133 Ga0495603_0009910 3300046455 Bacteria 5768
134 Ga0495629_0002898 3300046459 Bacteria 13093
135 Ga0495629_0003325 3300046459 Bacteria 12155
136 Ga0495629_0003812 3300046459 Bacteria 11364
137 Ga0495629_0042779 3300046459 Bacteria 3182
138 Ga0495651_0072365 3300046462 Bacteria 2618
139 Ga0495605_0003167 3300046474 Bacteria 9890
140 Ga0495662_0002697 3300046476 Bacteria 8973
141 Ga0495664_0002673 3300046477 Bacteria 9602
142 Ga0495585_0022968 3300046492 Bacteria 3580
143 Ga0495594_0028463 3300046499 Bacteria 3016
144 Ga0495630_0007205 3300046517 Bacteria 7928
145 Ga0495631_0004809 3300046518 Bacteria 7117
146 Ga0495648_0039223 3300046524 Bacteria 3016
147 Ga0495666_0021536 3300046526 Bacteria 3191
148 Ga0495587_0000952 3300046536 Bacteria 19045
149 Ga0495634_0001784 3300046642 Bacteria 18610
150 Ga0495625_0011166 3300046660 Bacteria 7347
151 Ga0495588_0003255 3300046674 Bacteria 7048
152 Ga0495657_0002018 3300046675 Bacteria 17287
153 Ga0495613_0000729 3300046689 Bacteria 25751
154 Ga0495613_0001554 3300046689 Bacteria 17418
155 Ga0495613_0006629 3300046689 Bacteria 8650
156 Ga0495613_0032144 3300046689 Bacteria 3897
157 Ga0495671_0005839 3300046692 Bacteria 7166
158 Ga0495589_0015275 3300046794 Bacteria 3952
159 Ga0495676_0010566 3300047321 Bacteria 8362
160 Ga0495676_0067550 3300047321 Bacteria 2765
161 Ga0495680_0025813 3300047322 Bacteria 4857
162 Ga0495687_005720 3300047443 Bacteria 7830
163 Ga0495675_0002168 3300047444 Bacteria 11705
164 Ga0495602_0047935 3300048088 Bacteria 3845
165 Ga0495614_0001005 3300048089 Bacteria 12025
166 Ga0496125_0004021 3300048928 Bacteria 17262
167 Ga0501031_0014950 3300049568 Bacteria 5042
168 Ga0501032_0015756 3300049569 Bacteria 5330
169 Ga0501032_0044026 3300049569 Bacteria 3022
170 Ga0501033_0004692 3300049570 Bacteria 10937
171 Ga0501034_0002791 3300049571 Bacteria 20442
172 Ga0501034_0015506 3300049571 Bacteria 7829
173 Ga0501034_0028985 3300049571 Bacteria 5629
174 Ga0501034_0033291 3300049571 Bacteria 5230
175 Ga0501036_0024989 3300049572 Bacteria 5038
176 Ga0501037_0005920 3300049573 Bacteria 8929
177 Ga0501038_0029052 3300049574 Bacteria 4903
178 Ga0501040_0016468 3300049576 Bacteria 4894
179 Ga0501041_0045425 3300049577 Bacteria 2670
180 Ga0501046_0041991 3300049580 Bacteria 3647
181 Ga0501047_0000248 3300049581 Bacteria 63961
182 Ga0501047_0083692 3300049581 Bacteria 3066
183 Ga0501067_0003554 3300049583 Bacteria 8578
184 Ga0501067_0015715 3300049583 Bacteria 4187
185 Ga0501068_0000719 3300049584 Bacteria 16975
186 Ga0501069_0008064 3300049585 Bacteria 5532
187 Ga0501069_0011884 3300049585 Bacteria 4617
188 Ga0501070_0012050 3300049586 Bacteria 7297
189 Ga0501071_0000025 3300049587 Bacteria 49332
190 Ga0501072_0000410 3300049588 Bacteria 30636
191 Ga0501074_0009673 3300049590 Bacteria 6999
192 Ga0501079_0056118 3300049741 Bacteria 3039
193 Ga0501080_0002814 3300049742 Bacteria 15291
194 Ga0501083_0000422 3300049744 Bacteria 27169
195 Ga0501035_0000416 3300049822 Bacteria 48248
196 Ga0501044_0002127 3300049823 Bacteria 22728
197 Ga0501045_0001009 3300049824 Bacteria 18478
198 nmdc:mga08y16_31372_c1 3300050511 Bacteria 5588
199 nmdc:mga08y16_7706_c1 3300050511 Bacteria 11273
200 nmdc:mga0rr50_17999_c1 3300050513 Bacteria 4735
201 nmdc:mga08x19_2020_c1 3300050514 Bacteria 12437
202 nmdc:mga08x19_58529_c1 3300050514 Bacteria 2493
203 nmdc:mga0a205_12889_c1 3300050515 Bacteria 6393
204 Ga0495601_0021691 3300053077 Bacteria 3935
205 Ga0500646_0000177 3300053090 Bacteria 19078
206 Ga0500560_000996 3300053107 Bacteria 4540
207 Ga0500588_0001399 3300053146 Bacteria 4581
208 Ga0500616_0028394 3300053153 Bacteria 3083
209 Ga0466962_0000722 3300061719 Bacteria 14769

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037471 Ga0395905_0066270 Ga0395905_0066270_775_2628 577
2 3300044683 Ga0466965_0003943 Ga0466965_0003943_314_2380 590
3 3300044684 Ga0466966_0001006 Ga0466966_0001006_7480_9546 590
4 3300044693 Ga0466961_0001759 Ga0466961_0001759_11339_13405 590
5 3300044694 Ga0466963_0000596 Ga0466963_0000596_170_2236 590
6 3300044719 Ga0466971_0000089 Ga0466971_0000089_31298_33364 590
7 3300044765 Ga0466970_0000682 Ga0466970_0000682_11349_13415 590
8 3300044842 Ga0466957_0000738 Ga0466957_0000738_189_2255 590
9 3300045049 Ga0466959_0000689 Ga0466959_0000689_9287_11353 590
10 3300045836 Ga0466958_0000290 Ga0466958_0000290_11237_13303 590
11 3300061719 Ga0466962_0000722 Ga0466962_0000722_1155_3221 590
12 3300047322 Ga0495680_0025813 Ga0495680_0025813_12_1892 595
13 3300046459 Ga0495629_0042779 Ga0495629_0042779_431_2407 609
14 3300046499 Ga0495594_0028463 Ga0495594_0028463_706_2682 609
15 3300044712 Ga0453684_0093294 Ga0453684_0093294_1677_3617 611
16 3300033179 Ga0307507_10047657 Ga0307507_100476573 614
17 3300044901 Ga0466960_0011570 Ga0466960_0011570_1592_3640 622
18 3300031730 Ga0307516_10002782 Ga0307516_100027821 624
19 3300046476 Ga0495662_0002697 Ga0495662_0002697_1335_3437 624
20 3300046689 Ga0495613_0006629 Ga0495613_0006629_1643_3745 624
21 3300046794 Ga0495589_0015275 Ga0495589_0015275_1578_3677 625
22 3300049580 Ga0501046_0041991 Ga0501046_0041991_1293_3344 628
23 3300028794 Ga0307515_10000146 Ga0307515_1000014652 629
24 3300035091 Ga0373951_0000121 Ga0373951_0000121_17107_19035 629
25 3300046455 Ga0495603_0009910 Ga0495603_0009910_1859_3958 633
26 3300046492 Ga0495585_0022968 Ga0495585_0022968_1002_3101 634
27 3300009094 Ga0111539_10040593 Ga0111539_100405934 637
28 3300050511 nmdc:mga08y16_31372_c1 nmdc:mga08y16_31372_c1_2183_4195 637
29 3300031838 Ga0307518_10029847 Ga0307518_100298472 639
30 3300044693 Ga0466961_0026961 Ga0466961_0026961_1562_3643 640
31 3300053077 Ga0495601_0021691 Ga0495601_0021691_39_2150 640
32 3300028786 Ga0307517_10026002 Ga0307517_100260023 641
33 3300047443 Ga0495687_005720 Ga0495687_005720_5145_7121 641
34 3300049583 Ga0501067_0015715 Ga0501067_0015715_1012_3105 642
35 3300049585 Ga0501069_0011884 Ga0501069_0011884_2236_4329 642
36 3300028563 Ga0265319_1000371 Ga0265319_100037132 645
37 3300028573 Ga0265334_10002004 Ga0265334_100020044 645
38 3300028577 Ga0265318_10001319 Ga0265318_1000131911 645
39 3300028653 Ga0265323_10000672 Ga0265323_100006726 645
40 3300028654 Ga0265322_10000375 Ga0265322_1000037513 645
41 3300029957 Ga0265324_10000243 Ga0265324_1000024332 645
42 3300029957 Ga0265324_10002212 Ga0265324_100022127 645
43 3300031235 Ga0265330_10000067 Ga0265330_1000006768 645
44 3300031238 Ga0265332_10000513 Ga0265332_1000051317 645
45 3300031240 Ga0265320_10000644 Ga0265320_1000064413 645
46 3300031240 Ga0265320_10000896 Ga0265320_1000089613 645
47 3300031241 Ga0265325_10001585 Ga0265325_100015858 645
48 3300031247 Ga0265340_10002647 Ga0265340_100026476 645
49 3300031249 Ga0265339_10001338 Ga0265339_1000133824 645
50 3300031250 Ga0265331_10000271 Ga0265331_1000027110 645
51 3300031344 Ga0265316_10001501 Ga0265316_1000150113 645
52 3300031344 Ga0265316_10002576 Ga0265316_1000257616 645
53 3300031595 Ga0265313_10000713 Ga0265313_100007138 645
54 3300031711 Ga0265314_10001618 Ga0265314_1000161813 645
55 3300031712 Ga0265342_10001108 Ga0265342_1000110816 645
56 3300031712 Ga0265342_10005850 Ga0265342_1000585014 645
57 3300042876 Ga0451577_0000255 Ga0451577_0000255_72235_74283 645
58 3300042876 Ga0451577_0000461 Ga0451577_0000461_28047_30104 645
59 3300044712 Ga0453684_0000024 Ga0453684_0000024_302743_304791 645
60 3300044712 Ga0453684_0003833 Ga0453684_0003833_6174_8231 645
61 3300045051 Ga0451576_0014129 Ga0451576_0014129_6429_8486 645
62 3300047444 Ga0495675_0002168 Ga0495675_0002168_1374_3476 645
63 3300049568 Ga0501031_0014950 Ga0501031_0014950_30_2072 645
64 3300049569 Ga0501032_0015756 Ga0501032_0015756_2971_5013 645
65 3300049570 Ga0501033_0004692 Ga0501033_0004692_5755_7797 645
66 3300049571 Ga0501034_0002791 Ga0501034_0002791_328_2370 645
67 3300049576 Ga0501040_0016468 Ga0501040_0016468_507_2549 645
68 3300049577 Ga0501041_0045425 Ga0501041_0045425_547_2589 645
69 3300049581 Ga0501047_0000248 Ga0501047_0000248_9841_11883 645
70 3300049583 Ga0501067_0003554 Ga0501067_0003554_363_2405 645
71 3300049584 Ga0501068_0000719 Ga0501068_0000719_7885_9927 645
72 3300049585 Ga0501069_0008064 Ga0501069_0008064_252_2294 645
73 3300049586 Ga0501070_0012050 Ga0501070_0012050_2971_5013 645
74 3300049587 Ga0501071_0000025 Ga0501071_0000025_22757_24799 645
75 3300049588 Ga0501072_0000410 Ga0501072_0000410_18309_20351 645
76 3300049590 Ga0501074_0009673 Ga0501074_0009673_29_2071 645
77 3300049741 Ga0501079_0056118 Ga0501079_0056118_445_2487 645
78 3300049742 Ga0501080_0002814 Ga0501080_0002814_8013_10055 645
79 3300049744 Ga0501083_0000422 Ga0501083_0000422_18337_20379 645
80 3300049822 Ga0501035_0000416 Ga0501035_0000416_10187_12229 645
81 3300049823 Ga0501044_0002127 Ga0501044_0002127_20560_22602 645
82 3300049824 Ga0501045_0001009 Ga0501045_0001009_2285_4327 645
83 3300049571 Ga0501034_0028985 Ga0501034_0028985_983_3127 646
84 3300049573 Ga0501037_0005920 Ga0501037_0005920_1654_3798 646
85 3300028786 Ga0307517_10018703 Ga0307517_100187032 649
86 3300028794 Ga0307515_10002635 Ga0307515_1000263527 649
87 3300031616 Ga0307508_10019933 Ga0307508_100199332 649
88 3300033180 Ga0307510_10058668 Ga0307510_100586682 649
89 3300046454 Ga0495592_0005341 Ga0495592_0005341_107_2170 649
90 3300046459 Ga0495629_0003812 Ga0495629_0003812_2164_4218 649
91 3300046462 Ga0495651_0072365 Ga0495651_0072365_378_2441 649
92 3300046477 Ga0495664_0002673 Ga0495664_0002673_147_2210 649
93 3300046517 Ga0495630_0007205 Ga0495630_0007205_426_2489 649
94 3300046536 Ga0495587_0000952 Ga0495587_0000952_8942_11005 649
95 3300046642 Ga0495634_0001784 Ga0495634_0001784_974_3037 649
96 3300046660 Ga0495625_0011166 Ga0495625_0011166_5229_7283 649
97 3300046674 Ga0495588_0003255 Ga0495588_0003255_3723_5777 649
98 3300046689 Ga0495613_0001554 Ga0495613_0001554_8233_10296 649
99 3300046692 Ga0495671_0005839 Ga0495671_0005839_54_2108 649
100 3300048088 Ga0495602_0047935 Ga0495602_0047935_492_2555 649
101 3300053107 Ga0500560_000996 Ga0500560_000996_2469_4523 649
102 3300033180 Ga0307510_10037824 Ga0307510_100378242 650
103 3300042007 Ga0439449_0009376 Ga0439449_0009376_1607_3652 650
104 3300049574 Ga0501038_0029052 Ga0501038_0029052_225_2354 651
105 3300049569 Ga0501032_0044026 Ga0501032_0044026_705_2822 652
106 3300049571 Ga0501034_0015506 Ga0501034_0015506_2027_4156 652
107 3300049581 Ga0501047_0083692 Ga0501047_0083692_727_2808 652
108 iso_pu_bacteria 2643221670 2644388293 652
109 3300021388 Ga0213875_10000276 Ga0213875_1000027620 653
110 3300037853 Ga0436364_0079644 Ga0436364_0079644_148348_150471 653
111 iso_pu_bacteria 2918501144 2918507230 653
112 iso_pu_bacteria 2643221587 2643943317 654
113 iso_pu_bacteria 2643221677 2644430785 654
114 3300006175 Ga0070712_100063915 Ga0070712_1000639151 655
115 3300025915 Ga0207693_10066332 Ga0207693_100663321 655
116 iso_pu_bacteria 2895427314 2895433390 655
117 3300044683 Ga0466965_0013740 Ga0466965_0013740_1404_3389 656
118 3300044712 Ga0453684_0000100 Ga0453684_0000100_365950_368040 656
119 3300046675 Ga0495657_0002018 Ga0495657_0002018_3836_5938 656
120 3300053153 Ga0500616_0028394 Ga0500616_0028394_756_2822 656
121 iso_pu_bacteria 2912715099 2912716181 656
122 3300031507 Ga0307509_10042371 Ga0307509_100423713 657
123 iso_pu_bacteria 2811994917 2812477538 657
124 iso_pu_bacteria 2862574272 2862574682 657
125 iso_pu_bacteria 2891554331 2891558145 657
126 iso_pu_bacteria 2915768154 2915770450 657
127 iso_pu_bacteria 2582581312 2585301858 658
128 iso_pu_bacteria 2582581314 2585311820 658
129 iso_pu_bacteria 2616644814 2616697918 658
130 iso_pu_bacteria 2616644941 2616905678 658
131 iso_pu_bacteria 2784746763 2785339953 658
132 iso_pu_bacteria 2811994879 2812354575 658
133 iso_pu_bacteria 2867346516 2867351188 658
134 iso_pu_bacteria 2912757875 2912758166 658
135 iso_pu_bacteria 2946064051 2946071094 658
136 iso_pu_bacteria 2947224130 2947225629 658
137 iso_pu_bacteria 8025530807 8025537244 658
138 3300005445 Ga0070708_100000929 Ga0070708_10000092911 659
139 3300005445 Ga0070708_100001716 Ga0070708_10000171610 659
140 3300005445 Ga0070708_100003460 Ga0070708_1000034609 659
141 3300005445 Ga0070708_100137390 Ga0070708_1001373901 659
142 3300005467 Ga0070706_100001515 Ga0070706_10000151511 659
143 3300005467 Ga0070706_100001725 Ga0070706_10000172511 659
144 3300005467 Ga0070706_100004461 Ga0070706_1000044617 659
145 3300005467 Ga0070706_100007484 Ga0070706_1000074843 659
146 3300005467 Ga0070706_100008741 Ga0070706_1000087412 659
147 3300005468 Ga0070707_100001328 Ga0070707_10000132811 659
148 3300005468 Ga0070707_100001828 Ga0070707_1000018282 659
149 3300005468 Ga0070707_100004619 Ga0070707_10000461912 659
150 3300005468 Ga0070707_100010303 Ga0070707_1000103039 659
151 3300005468 Ga0070707_100011027 Ga0070707_1000110277 659
152 3300005468 Ga0070707_100030653 Ga0070707_1000306535 659
153 3300005471 Ga0070698_100015059 Ga0070698_1000150593 659
154 3300005518 Ga0070699_100000239 Ga0070699_1000002396 659
155 3300005518 Ga0070699_100000685 Ga0070699_1000006855 659
156 3300005518 Ga0070699_100001702 Ga0070699_1000017027 659
157 3300005518 Ga0070699_100040400 Ga0070699_1000404003 659
158 3300005536 Ga0070697_100002291 Ga0070697_1000022913 659
159 3300006028 Ga0070717_10000007 Ga0070717_100000071 659
160 3300006028 Ga0070717_10003938 Ga0070717_100039387 659
161 3300006028 Ga0070717_10054737 Ga0070717_100547373 659
162 3300006852 Ga0075433_10005065 Ga0075433_1000506510 659
163 3300006914 Ga0075436_100001748 Ga0075436_10000174810 659
164 3300006914 Ga0075436_100052252 Ga0075436_1000522522 659
165 3300007265 Ga0099794_10000427 Ga0099794_100004277 659
166 3300009094 Ga0111539_10005514 Ga0111539_1000551413 659
167 3300013307 Ga0157372_10045334 Ga0157372_100453344 659
168 3300025885 Ga0207653_10007851 Ga0207653_100078513 659
169 3300025910 Ga0207684_10000002 Ga0207684_10000002422 659
170 3300025910 Ga0207684_10000026 Ga0207684_1000002611 659
171 3300025910 Ga0207684_10000148 Ga0207684_1000014812 659
172 3300025910 Ga0207684_10000222 Ga0207684_1000022212 659
173 3300025910 Ga0207684_10000231 Ga0207684_1000023124 659
174 3300025910 Ga0207684_10005389 Ga0207684_100053899 659
175 3300025922 Ga0207646_10000093 Ga0207646_10000093107 659
176 3300025922 Ga0207646_10000394 Ga0207646_1000039412 659
177 3300025922 Ga0207646_10003624 Ga0207646_1000362420 659
178 3300027671 Ga0209588_1000036 Ga0209588_100003669 659
179 3300027907 Ga0207428_10035196 Ga0207428_100351961 659
180 3300028556 Ga0265337_1000075 Ga0265337_100007548 659
181 3300028558 Ga0265326_10004553 Ga0265326_100045532 659
182 3300028563 Ga0265319_1000077 Ga0265319_100007735 659
183 3300028577 Ga0265318_10007470 Ga0265318_100074702 659
184 3300028666 Ga0265336_10000066 Ga0265336_1000006648 659
185 3300028800 Ga0265338_10000388 Ga0265338_1000038867 659
186 3300028800 Ga0265338_10000637 Ga0265338_1000063753 659
187 3300028800 Ga0265338_10001977 Ga0265338_1000197736 659
188 3300031238 Ga0265332_10010928 Ga0265332_100109282 659
189 3300031241 Ga0265325_10005797 Ga0265325_100057972 659
190 3300031241 Ga0265325_10030876 Ga0265325_100308762 659
191 3300031242 Ga0265329_10001808 Ga0265329_100018082 659
192 3300031247 Ga0265340_10006493 Ga0265340_100064936 659
193 3300031595 Ga0265313_10004830 Ga0265313_100048307 659
194 3300031727 Ga0316576_10056764 Ga0316576_100567642 659
195 3300045051 Ga0451576_0079214 Ga0451576_0079214_1064_3145 659
196 3300048928 Ga0496125_0004021 Ga0496125_0004021_13340_15424 659
197 3300049571 Ga0501034_0033291 Ga0501034_0033291_1338_3392 659
198 3300049572 Ga0501036_0024989 Ga0501036_0024989_1232_3286 659
199 3300050511 nmdc:mga08y16_7706_c1 nmdc:mga08y16_7706_c1_8876_10975 659
200 3300050513 nmdc:mga0rr50_17999_c1 nmdc:mga0rr50_17999_c1_2083_4191 659
201 3300050514 nmdc:mga08x19_2020_c1 nmdc:mga08x19_2020_c1_4826_6934 659
202 3300050514 nmdc:mga08x19_58529_c1 nmdc:mga08x19_58529_c1_116_2224 659
203 3300050515 nmdc:mga0a205_12889_c1 nmdc:mga0a205_12889_c1_4034_6124 659
204 iso_pu_bacteria 2863404153 2863410008 660
205 iso_pu_bacteria 2884693830 2884700259 660
206 iso_pu_bacteria 2895442618 2895450517 660
207 iso_pu_bacteria 2995463766 2995470435 660
208 3300005437 Ga0070710_10008487 Ga0070710_100084872 661
209 3300031616 Ga0307508_10015960 Ga0307508_100159604 661
210 3300031649 Ga0307514_10002467 Ga0307514_100024679 661
211 3300031730 Ga0307516_10002346 Ga0307516_1000234616 661
212 3300035120 Ga0373957_0010067 Ga0373957_0010067_15_2072 661
213 3300041404 Ga0439436_0001873 Ga0439436_0001873_1914_3995 661
214 3300041406 Ga0439439_0004403 Ga0439439_0004403_589_2670 661
215 3300042014 Ga0439457_000907 Ga0439457_000907_6561_8642 661
216 3300042014 Ga0439457_001720 Ga0439457_001720_1775_3817 661
217 3300042131 Ga0450894_000863 Ga0450894_000863_401_2461 661
218 3300042145 Ga0450906_001519 Ga0450906_001519_1858_3918 661
219 3300044684 Ga0466966_0011031 Ga0466966_0011031_3524_5587 661
220 3300044693 Ga0466961_0023125 Ga0466961_0023125_565_2628 661
221 3300046455 Ga0495603_0002232 Ga0495603_0002232_6604_8709 661
222 3300046459 Ga0495629_0002898 Ga0495629_0002898_3375_5480 661
223 3300046459 Ga0495629_0003325 Ga0495629_0003325_7251_9365 661
224 3300046474 Ga0495605_0003167 Ga0495605_0003167_6608_8812 661
225 3300046518 Ga0495631_0004809 Ga0495631_0004809_736_2940 661
226 3300046524 Ga0495648_0039223 Ga0495648_0039223_87_2285 661
227 3300046526 Ga0495666_0021536 Ga0495666_0021536_317_2416 661
228 3300046689 Ga0495613_0000729 Ga0495613_0000729_726_2831 661
229 3300046689 Ga0495613_0032144 Ga0495613_0032144_815_2914 661
230 3300047321 Ga0495676_0010566 Ga0495676_0010566_5869_7974 661
231 3300047321 Ga0495676_0067550 Ga0495676_0067550_80_2242 661
232 3300048089 Ga0495614_0001005 Ga0495614_0001005_1877_3982 661
233 3300053090 Ga0500646_0000177 Ga0500646_0000177_1183_3234 661
234 3300053146 Ga0500588_0001399 Ga0500588_0001399_1016_3067 661
235 iso_pu_bacteria 2862507626 2862510702 661
236 iso_pu_bacteria 8003856774 8003860646 661

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00679

EFG_C

Elongation factor G C-terminus

644

729

0.97

PF03144

GTP_EFTU_D2

Elongation factor Tu domain 2

359

426

0.97

PF03764

EFG_IV

Elongation factor G, domain IV

514

642

0.97

PF14492

EFG_III

Elongation Factor G, domain III

439

513

0.97

PF00009

GTP_EFTU

Elongation factor Tu GTP binding domain

49

320

0.96

PF22042

EF-G_D2

Elongation factor G domain 2

345

428

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vh6-assembly1.cif.gz_A 2.6 angstrom resolution crystal structure of n-terminal fragment (residues 1-406) of elongation factor g from bacillus subtilis. 0.9042 6 381
6bk7-assembly2.cif.gz_B 1.83 angstrom resolution crystal structure of n-terminal fragment (residues 1-404) of elongation factor g from enterococcus faecalis 0.9012 6 379
7oya-assembly1.cif.gz_v2 cryo-em structure of the 1 hpf zebrafish embryo 80s ribosome 0.8957 585 648
5ty0-assembly1.cif.gz_A 2.22 angstrom crystal structure of n-terminal fragment (residues 1-419) of elongation factor g from legionella pneumophila. 0.8946 6 381
5ty0-assembly1.cif.gz_A 2.22 angstrom crystal structure of n-terminal fragment (residues 1-419) of elongation factor g from legionella pneumophila. 0.8854 6 381
ID Description Score Start End Superfamily
af_Q9USZ1_675_770_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9858 581 657 3.30.70.240
af_Q9USZ1_49_356_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9797 6 274 3.40.50.300
af_Q8I335_822_963_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9771 578 650 3.30.70.240
af_C6KSM4_489_601_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9771 289 380 2.40.30.10
af_Q4DGU6_749_882_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9752 578 657 3.30.70.240
ID Description Score Start End GO Terms
AF-A0A6M0AQQ7-F1-model_v4 Elongation factor G 0.995 585 657 GO:0003746
GO:0005525
GO:0032790
AF-A0A139PLA6-F1-model_v4 Translation elongation factor G 0.994 585 657 GO:0003746
GO:0005525
GO:0032790
AF-A0A3D2AYU4-F1-model_v4 Elongation factor G 0.9889 36 134 GO:0003746
GO:0003924
GO:0005525
GO:0032790
AF-A0A257WUG1-F1-model_v4 Elongation factor G 0.9882 6 182 GO:0003746
GO:0003924
GO:0005525
GO:0032790
AF-A0A534QZU9-F1-model_v4 Elongation factor G 0.988 520 657 GO:0003746
GO:0005525
GO:0032790

Feature Viewer

pLDDT pTM Quality
89.88 0.85 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map