F349187

General Info

Members Datasets Scaffolds Average Seq Length
236 164 198 1009

Family's Representative Sequence

Representative Sequence 3300028794|Ga0307515_10036445|Ga0307515_100364452
Length 1032
Sequence MESNKKYWKGLEEYKNTPDFVENNKNEFAEPLPIEDVLSEAGLSTVTPRRDFLKALGFGLGAVTLAACQKAPVTKSIPYLIRPEEVVPGIPNFYVSTFKGQSVLVKTVVGRPIKIEVNPNAGVFSTGTDAQAQASVLDLYDVSKLTDPSLKKAKTSWSELDAFVKGELNKAQASGKKIRIVSSSLNSPSAKGVIADFAVKYPTTKLVQYDAVSYTGIIKANENSFGKAVLPKYNFDKADLIVSFGADFLGTWISGEEFTAQYVANRNYKSLEKKKMSRHFQFEAGMSLTGTNADTRVPIKLSEEGPALITLYNAITGGSLAGGSLGNNVTADKALKLVAKELLQNKGKSLVVSGSNDVSTQILVNAINSAIGSYGTTIDLDNACKRYEGNDAEFAELINEMNRGEVAAVFFLNSNPAYDAIDNTAFTDALAKVALKISFADRDDETAGLCDVVAITPNYLESWGDANSYEGFYSIVQPTINPVFNSRQAEQSLLIWSDAAVQDYYQYVRNNWEKNILPVVGKTWNDLLQTGVFSATAKTAGAYSFSMSLDAVASSIVASSKALVSKGNDGLELQVYESIPMRDGKHANNAFLQELPDPVSKVTWDNYIALAPKQAEKLGYKEFDILTVKGEKGYTIDLPILIQPGQAMGTASIALGYGRTKTGKAGNNVGKNAFPFVSFSNGTLKYATTVTLSSTGGREELAQTQTHYSFEGRNIIRETTLKDYLKDPAAGSGNHHKHKVYDLWTTDKYEKLGNDWVMAIDLNACTGCGSCIVACNVENNIPVVGKDEVRRRREMHWLRIDRYYSYNQEPAAHTEAAHGHEEGSNAVTKEKEIAHLEENQMNNVSVVHQPMMCQHCDHAPCETVCPVLATVHSSDGLNHMAYNRCVGTRYCANNCPYKVRRFNWFNYWNDSRFDNYLNNEFTQLVLNPDVTTRSRGVMEKCSMCIQRIQAGKLTAKMEKRALKDGDIKMACQQACSANAIIFGDKNDPNSEVAKALKSERIYYVLEEINVQPGIGYMTKVRNIDSETKEVHA

Samples

Sample ID Description Type Environment
1 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
2 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
3 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
4 2738541283 Pedobacter sp. OK701 Isolate Unclassified
5 2738541284 Pedobacter sp. YR016 Isolate Unclassified
6 2738541302 Pedobacter sp. CF074 Isolate Unclassified
7 2738543023 Pedobacter sp. OK628 Isolate Unclassified
8 2739367651 Pedobacter sp. OK291 Isolate Unclassified
9 2739367656 Pedobacter sp. CF523 Isolate Unclassified
10 2739367663 Pedobacter sp. YR510 Isolate Unclassified
11 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
12 2818991437 Pedobacter terrae 518 Isolate Unclassified
13 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
14 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
15 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
16 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
17 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
18 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
19 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
20 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
21 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
22 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
23 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
24 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
25 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
26 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
27 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
28 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
29 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
30 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
31 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
32 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
33 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
34 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
35 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
36 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
37 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
38 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
39 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
40 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
41 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
42 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
43 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
44 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
45 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
46 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
47 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
48 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
49 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
52 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
53 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
54 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
55 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
56 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
57 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
58 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
59 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
60 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
61 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
62 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
63 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
64 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
65 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
67 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
71 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
72 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
73 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
74 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
75 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
76 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
77 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
78 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
79 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
80 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
81 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
82 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
83 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
84 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
85 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
86 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
87 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
88 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
89 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
90 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
91 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
93 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
94 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
95 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
96 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
97 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
100 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
101 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
121 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
122 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
123 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
124 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
125 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
126 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
127 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
128 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
131 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
132 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
133 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
136 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
137 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
138 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
139 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
140 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
141 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
142 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
143 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
144 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
145 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
146 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
147 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
148 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
149 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
150 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
151 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
152 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
153 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
154 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
155 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
156 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
157 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
158 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
161 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
162 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
163 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
164 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.78
Metatranscriptomes 1.69
Isolates 16.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.29
Nodule 0
Rhizoplane 0.42
Rhizosphere 74.15
Stem 0
Stem Tuber 0
Unclassified 13.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10000333 3300001990 Bacteria 15751
2 JGI24735J21928_10000003 3300002067 Bacteria 385983
3 JGI25162J39368_1000203 3300002737 Bacteria 62704
4 JGI25162J39368_1002655 3300002737 Bacteria 6576
5 JGI25152J39213_1000050 3300002773 Bacteria 79659
6 JGI25150J39212_1000003 3300002774 Bacteria 508651
7 JGI25151J46595_10000002 3300003187 Bacteria 731381
8 JGI25165J46597_1001053 3300003214 Bacteria 17875
9 JGI25153J46596_10000030 3300003215 Bacteria 200879
10 rootH1_10032121 3300003316 Bacteria 6442
11 rootH1_10032121 3300003323 Bacteria 3505
12 Ga0055536_1000010 3300003781 Bacteria 304614
13 Ga0058863_10141662 3300004799 Bacteria 13158
14 Ga0058861_10030742 3300004800 Bacteria 12020
15 Ga0058862_10002966 3300004803 Bacteria 14510
16 Ga0065714_10003853 3300005288 Bacteria 5953
17 Ga0065704_10074563 3300005289 Bacteria 6177
18 Ga0070658_10000060 3300005327 Bacteria 112561
19 Ga0070658_10024777 3300005327 Bacteria 4812
20 Ga0070676_10000152 3300005328 Bacteria 27554
21 Ga0068868_100025000 3300005338 Bacteria 4537
22 Ga0070659_100000199 3300005366 Bacteria 46342
23 Ga0070659_100022491 3300005366 Bacteria 4814
24 Ga0070663_100007093 3300005455 Bacteria 6797
25 Ga0070678_100006333 3300005456 Bacteria 6940
26 Ga0070662_100000935 3300005457 Bacteria 17877
27 Ga0070665_100000264 3300005548 Bacteria 85867
28 Ga0068855_100000098 3300005563 Bacteria 105977
29 Ga0068855_100000149 3300005563 Bacteria 89273
30 Ga0068855_100025917 3300005563 Bacteria 7014
31 Ga0068856_100000120 3300005614 Bacteria 78280
32 Ga0075366_10000343 3300006195 Bacteria 21407
33 Ga0075366_10000422 3300006195 Bacteria 19817
34 Ga0097621_100013359 3300006237 Bacteria 6119
35 Ga0068871_100000817 3300006358 Bacteria 20842
36 Ga0068865_100001329 3300006881 Bacteria 14401
37 Ga0105240_10000371 3300009093 Bacteria 84390
38 Ga0105240_10121843 3300009093 Bacteria 3140
39 Ga0105243_10000018 3300009148 Bacteria 227618
40 Ga0105241_10007118 3300009174 Bacteria 8236
41 Ga0105241_10011132 3300009174 Bacteria 6597
42 Ga0105242_10033578 3300009176 Bacteria 4109
43 Ga0105237_10000120 3300009545 Bacteria 109953
44 Ga0105237_10000535 3300009545 Bacteria 53620
45 Ga0105237_10000632 3300009545 Bacteria 49178
46 Ga0105237_10002670 3300009545 Bacteria 21900
47 Ga0105237_10004705 3300009545 Bacteria 15703
48 Ga0105238_10000612 3300009551 Bacteria 37482
49 Ga0105239_10000049 3300010375 Bacteria 177578
50 Ga0105239_10000086 3300010375 Bacteria 129798
51 Ga0105239_10003946 3300010375 Bacteria 17973
52 Ga0105239_10011444 3300010375 Bacteria 9895
53 Ga0105239_10038203 3300010375 Bacteria 5261
54 Ga0105239_10068474 3300010375 Bacteria 3900
55 Ga0157373_10000125 3300013100 Bacteria 59653
56 Ga0157373_10001788 3300013100 Bacteria 16341
57 Ga0157373_10002603 3300013100 Bacteria 13703
58 Ga0157373_10004966 3300013100 Bacteria 9999
59 Ga0157373_10026079 3300013100 Bacteria 4224
60 Ga0157371_10000506 3300013102 Bacteria 47013
61 Ga0157371_10000980 3300013102 Bacteria 31717
62 Ga0157371_10001492 3300013102 Bacteria 24223
63 Ga0157371_10043697 3300013102 Bacteria 3191
64 Ga0157370_10014578 3300013104 Bacteria 8031
65 Ga0157370_10035154 3300013104 Bacteria 4873
66 Ga0157370_10048634 3300013104 Bacteria 4062
67 Ga0157370_10052346 3300013104 Bacteria 3898
68 Ga0157370_10075246 3300013104 Bacteria 3184
69 Ga0157370_10075477 3300013104 Bacteria 3178
70 Ga0157370_10076447 3300013104 Bacteria 3154
71 Ga0157369_10000373 3300013105 Bacteria 59576
72 Ga0157369_10008712 3300013105 Bacteria 11632
73 Ga0157374_10006785 3300013296 Bacteria 9734
74 Ga0157374_10035438 3300013296 Bacteria 4566
75 Ga0157378_10031067 3300013297 Bacteria 4717
76 Ga0163162_10000008 3300013306 Bacteria 316194
77 Ga0163162_10000036 3300013306 Bacteria 144093
78 Ga0163162_10031080 3300013306 Bacteria 5295
79 Ga0157372_10000190 3300013307 Bacteria 67909
80 Ga0157372_10001572 3300013307 Bacteria 24881
81 Ga0157372_10021479 3300013307 Bacteria 6975
82 Ga0157375_10019605 3300013308 Bacteria 6156
83 Ga0157380_10000003 3300014326 Bacteria 224643
84 Ga0182008_10000002 3300014497 Bacteria 480216
85 Ga0182008_10000073 3300014497 Bacteria 78212
86 Ga0182008_10000122 3300014497 Bacteria 58755
87 Ga0182008_10010909 3300014497 Bacteria 4846
88 Ga0182006_1001113 3300015261 Bacteria 17114
89 Ga0182006_1007266 3300015261 Bacteria 5083
90 Ga0182007_10000009 3300015262 Bacteria 316298
91 Ga0183373_1009 3300015682 Bacteria 210158
92 Ga0163161_10000194 3300017792 Bacteria 55862
93 Ga0163161_10007089 3300017792 Bacteria 7751
94 Ga0163161_10021720 3300017792 Bacteria 4512
95 Ga0206351_10385577 3300020077 Bacteria 5118
96 Ga0207427_100131 3300025231 Bacteria 93947
97 Ga0209437_100048 3300025233 Bacteria 405107
98 Ga0209437_100102 3300025233 Bacteria 224216
99 Ga0207425_1000003 3300025245 Bacteria 1145342
100 Ga0209026_1000683 3300025250 Bacteria 20446
101 Ga0209026_1004150 3300025250 Bacteria 4440
102 Ga0209129_1000014 3300025258 Bacteria 509018
103 Ga0209233_1000029 3300025261 Bacteria 641642
104 Ga0209233_1002115 3300025261 Bacteria 7487
105 Ga0209455_1002793 3300025272 Bacteria 6513
106 Ga0209676_1000009 3300025292 Bacteria 981719
107 Ga0209025_1000007 3300025294 Bacteria 1145109
108 Ga0209758_1000012 3300025297 Bacteria 949866
109 Ga0209050_1000190 3300025298 Bacteria 138532
110 Ga0207647_10000546 3300025904 Bacteria 29990
111 Ga0207647_10000588 3300025904 Bacteria 28282
112 Ga0207705_10000233 3300025909 Bacteria 55125
113 Ga0207654_10020087 3300025911 Bacteria 3535
114 Ga0207707_10022774 3300025912 Bacteria 5478
115 Ga0207695_10000142 3300025913 Bacteria 214715
116 Ga0207695_10003303 3300025913 Bacteria 22890
117 Ga0207695_10085859 3300025913 Bacteria 3175
118 Ga0207671_10001386 3300025914 Bacteria 28196
119 Ga0207671_10006165 3300025914 Bacteria 10773
120 Ga0207657_10019148 3300025919 Bacteria 6509
121 Ga0207652_10018817 3300025921 Bacteria 5669
122 Ga0207690_10001029 3300025932 Bacteria 17866
123 Ga0207690_10007709 3300025932 Bacteria 6389
124 Ga0207706_10000013 3300025933 Bacteria 188236
125 Ga0207709_10000021 3300025935 Bacteria 386722
126 Ga0207704_10000405 3300025938 Bacteria 19602
127 Ga0207667_10000014 3300025949 Bacteria 421261
128 Ga0207667_10000496 3300025949 Bacteria 51954
129 Ga0207667_10011989 3300025949 Bacteria 10035
130 Ga0207667_10035325 3300025949 Bacteria 5362
131 Ga0207667_10036165 3300025949 Bacteria 5294
132 Ga0207651_10001802 3300025960 Bacteria 9965
133 Ga0207639_10016424 3300026041 Bacteria 5237
134 Ga0207702_10000195 3300026078 Bacteria 71757
135 Ga0207648_10001141 3300026089 Bacteria 29844
136 Ga0268266_10000268 3300028379 Bacteria 85976
137 Ga0307517_10000207 3300028786 Bacteria 99774
138 Ga0307515_10036445 3300028794 Bacteria 7956
139 Ga0307515_10105401 3300028794 Bacteria 3357
140 Ga0265338_10011554 3300028800 Bacteria 10180
141 Ga0316176_1004700 3300030732 Bacteria 16177
142 Ga0316183_1113144 3300030742 Bacteria 14108
143 Ga0307405_10000016 3300031731 Bacteria 197180
144 Ga0307407_10000012 3300031903 Bacteria 172479
145 Ga0307412_10000050 3300031911 Bacteria 151527
146 Ga0307412_10001770 3300031911 Bacteria 11933
147 Ga0307409_100002580 3300031995 Bacteria 9520
148 Ga0307416_100000024 3300032002 Bacteria 186924
149 Ga0307414_10002249 3300032004 Bacteria 10081
150 Ga0307414_10002504 3300032004 Bacteria 9634
151 Ga0307507_10002394 3300033179 Bacteria 39588
152 Ga0307510_10005470 3300033180 Bacteria 15135
153 Ga0395899_0000027 3300037312 Bacteria 337387
154 Ga0395899_0000325 3300037312 Bacteria 60438
155 Ga0395899_0004227 3300037312 Bacteria 11253
156 Ga0395900_0002481 3300037418 Bacteria 20276
157 Ga0395900_0018754 3300037418 Bacteria 7055
158 Ga0395905_0000729 3300037471 Bacteria 43376
159 Ga0395905_0005514 3300037471 Bacteria 12906
160 Ga0395901_0003992 3300038443 Bacteria 14854
161 Ga0395901_0023950 3300038443 Bacteria 6263
162 Ga0436361_1223234 3300039447 Bacteria 16015
163 Ga0466966_0010590 3300044684 Bacteria 6129
164 Ga0466958_0011247 3300045836 Bacteria 5038
165 Ga0495650_0000107 3300046471 Bacteria 200864
166 Ga0495585_0000642 3300046492 Bacteria 32168
167 Ga0495585_0000753 3300046492 Bacteria 28699
168 Ga0495606_0000303 3300046507 Bacteria 84874
169 Ga0495610_0000289 3300046512 Bacteria 52803
170 Ga0495616_0004837 3300046513 Bacteria 8436
171 Ga0495631_0001423 3300046518 Bacteria 14537
172 Ga0495648_0019742 3300046524 Bacteria 4724
173 Ga0495648_0022587 3300046524 Bacteria 4326
174 Ga0495633_0000026 3300046558 Bacteria 204722
175 Ga0495633_0003813 3300046558 Bacteria 9866
176 Ga0495668_0000054 3300046616 Bacteria 203960
177 Ga0495625_0000021 3300046660 Bacteria 282133
178 Ga0495625_0001942 3300046660 Bacteria 23400
179 Ga0495625_0021159 3300046660 Bacteria 5011
180 Ga0495649_0000009 3300046694 Bacteria 451725
181 Ga0495687_001026 3300047443 Bacteria 27810
182 Ga0495687_003939 3300047443 Bacteria 10391
183 Ga0495686_0000319 3300047472 Bacteria 79929
184 Ga0495686_0014648 3300047472 Bacteria 5392
185 Ga0496116_0013994 3300048919 Bacteria 6427
186 Ga0496117_0000934 3300048920 Bacteria 44763
187 Ga0496118_0048741 3300048921 Bacteria 3267
188 Ga0496122_0007550 3300048925 Bacteria 12037
189 Ga0496123_0000866 3300048926 Bacteria 48135
190 Ga0496123_0029008 3300048926 Bacteria 4084
191 Ga0501223_000109 3300049663 Bacteria 23861
192 nmdc:mga0k408_1446_c1 3300050493 Bacteria 12847
193 nmdc:mga0k408_2349_c1 3300050493 Bacteria 10062
194 nmdc:mga0k408_82_c1 3300050493 Bacteria 45008
195 Ga0500651_0000188 3300053093 Bacteria 39379
196 Ga0500618_000016 3300053125 Bacteria 164049
197 Ga0500622_0001867 3300053156 Bacteria 15919
198 Ga0500624_000433 3300053157 Bacteria 12728

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048921 Ga0496118_0048741 Ga0496118_0048741_24_2468 810
2 3300048926 Ga0496123_0029008 Ga0496123_0029008_18_2876 940
3 3300046660 Ga0495625_0021159 Ga0495625_0021159_26_2869 947
4 3300014497 Ga0182008_10010909 Ga0182008_100109092 976
5 3300017792 Ga0163161_10000194 Ga0163161_100001948 976
6 3300009545 Ga0105237_10000120 Ga0105237_1000012031 980
7 3300013104 Ga0157370_10014578 Ga0157370_100145784 980
8 3300014497 Ga0182008_10000073 Ga0182008_100000734 980
9 3300015261 Ga0182006_1001113 Ga0182006_100111312 980
10 3300025914 Ga0207671_10006165 Ga0207671_100061656 980
11 3300048925 Ga0496122_0007550 Ga0496122_0007550_2339_5362 980
12 3300048926 Ga0496123_0000866 Ga0496123_0000866_35750_38773 980
13 3300013100 Ga0157373_10026079 Ga0157373_100260792 982
14 3300014497 Ga0182008_10000002 Ga0182008_10000002188 983
15 3300031911 Ga0307412_10001770 Ga0307412_100017703 984
16 3300005289 Ga0065704_10074563 Ga0065704_100745632 985
17 3300013100 Ga0157373_10000125 Ga0157373_100001252 985
18 3300013102 Ga0157371_10043697 Ga0157371_100436971 985
19 3300013104 Ga0157370_10075246 Ga0157370_100752461 985
20 3300013104 Ga0157370_10075477 Ga0157370_100754771 985
21 3300015261 Ga0182006_1007266 Ga0182006_10072661 985
22 3300031911 Ga0307412_10000050 Ga0307412_10000050128 985
23 3300053093 Ga0500651_0000188 Ga0500651_0000188_9887_12964 985
24 3300047472 Ga0495686_0000319 Ga0495686_0000319_24212_27259 986
25 3300049663 Ga0501223_000109 Ga0501223_000109_15489_18536 986
26 3300013104 Ga0157370_10052346 Ga0157370_100523462 987
27 3300053125 Ga0500618_000016 Ga0500618_000016_95407_98463 988
28 3300003781 Ga0055536_1000010 Ga0055536_1000010245 989
29 3300025292 Ga0209676_1000009 Ga0209676_1000009633 989
30 3300025298 Ga0209050_1000190 Ga0209050_100019024 989
31 3300002737 JGI25162J39368_1002655 JGI25162J39368_10026552 991
32 3300003214 JGI25165J46597_1001053 JGI25165J46597_100105313 991
33 3300025231 Ga0207427_100131 Ga0207427_10013151 991
34 3300025233 Ga0209437_100048 Ga0209437_10004859 991
35 3300025261 Ga0209233_1000029 Ga0209233_1000029318 991
36 3300048919 Ga0496116_0013994 Ga0496116_0013994_1481_4495 991
37 3300014326 Ga0157380_10000003 Ga0157380_10000003137 993
38 3300032004 Ga0307414_10002504 Ga0307414_100025041 995
39 iso_pu_bacteria 2721755487 2722726414 996
40 iso_pu_bacteria 2842903701 2842904841 996
41 iso_pu_bacteria 2890737413 2890739344 996
42 iso_pu_bacteria 2898713307 2898713621 996
43 iso_pu_bacteria 2904780799 2904783716 996
44 iso_pu_bacteria 2919177583 2919182266 996
45 iso_pu_bacteria 3003233435 3003233439 996
46 iso_pu_bacteria 8055588893 8055591166 996
47 iso_pu_bacteria 2896317667 2896319341 997
48 iso_pu_bacteria 2896344016 2896345202 997
49 iso_pu_bacteria 2585427687 2586208218 999
50 iso_pu_bacteria 2738541283 2738759027 999
51 iso_pu_bacteria 2739367651 2739587749 999
52 iso_pu_bacteria 2818991437 2819545650 999
53 iso_pu_bacteria 2842722452 2842724464 999
54 iso_pu_bacteria 2842909656 2842912042 999
55 iso_pu_bacteria 2857627736 2857629928 999
56 iso_pu_bacteria 2945997725 2945998687 999
57 iso_pu_bacteria 2954016120 2954021139 999
58 3300009148 Ga0105243_10000018 Ga0105243_100000188 1000
59 3300010375 Ga0105239_10011444 Ga0105239_100114445 1000
60 3300025272 Ga0209455_1002793 Ga0209455_10027935 1000
61 3300025935 Ga0207709_10000021 Ga0207709_10000021185 1000
62 3300030732 Ga0316176_1004700 Ga0316176_10047005 1000
63 3300030742 Ga0316183_1113144 Ga0316183_111314413 1000
64 3300048920 Ga0496117_0000934 Ga0496117_0000934_5101_8115 1000
65 iso_pu_bacteria 2738541302 2738856320 1000
66 iso_pu_bacteria 2739367656 2739614570 1000
67 iso_pu_bacteria 2739367663 2739646467 1000
68 iso_pu_bacteria 2849281842 2849285601 1000
69 iso_pu_bacteria 2902048731 2902052927 1000
70 iso_pu_bacteria 2904445276 2904448335 1000
71 3300005338 Ga0068868_100025000 Ga0068868_1000250001 1002
72 3300005457 Ga0070662_100000935 Ga0070662_10000093511 1002
73 3300005548 Ga0070665_100000264 Ga0070665_10000026444 1002
74 3300009093 Ga0105240_10121843 Ga0105240_101218431 1002
75 3300009174 Ga0105241_10007118 Ga0105241_100071186 1002
76 3300013296 Ga0157374_10006785 Ga0157374_100067852 1002
77 3300013307 Ga0157372_10021479 Ga0157372_100214794 1002
78 3300025904 Ga0207647_10000546 Ga0207647_100005462 1002
79 3300025911 Ga0207654_10020087 Ga0207654_100200871 1002
80 3300025913 Ga0207695_10085859 Ga0207695_100858591 1002
81 3300025919 Ga0207657_10019148 Ga0207657_100191484 1002
82 3300025933 Ga0207706_10000013 Ga0207706_1000001366 1002
83 3300025949 Ga0207667_10035325 Ga0207667_100353252 1002
84 3300028379 Ga0268266_10000268 Ga0268266_1000026843 1002
85 3300033180 Ga0307510_10005470 Ga0307510_100054709 1002
86 3300039447 Ga0436361_1223234 Ga0436361_1223234_3668_6709 1002
87 3300047443 Ga0495687_001026 Ga0495687_001026_3170_6217 1002
88 iso_pu_bacteria 2775506987 2776615494 1002
89 3300002773 JGI25152J39213_1000050 JGI25152J39213_100005052 1003
90 3300002774 JGI25150J39212_1000003 JGI25150J39212_1000003152 1003
91 3300003187 JGI25151J46595_10000002 JGI25151J46595_10000002152 1003
92 3300003215 JGI25153J46596_10000030 JGI25153J46596_10000030142 1003
93 3300013102 Ga0157371_10000506 Ga0157371_100005063 1003
94 3300013104 Ga0157370_10048634 Ga0157370_100486342 1003
95 3300013104 Ga0157370_10076447 Ga0157370_100764471 1003
96 3300013105 Ga0157369_10000373 Ga0157369_1000037344 1003
97 3300015262 Ga0182007_10000009 Ga0182007_10000009251 1003
98 3300025245 Ga0207425_1000003 Ga0207425_1000003686 1003
99 3300025258 Ga0209129_1000014 Ga0209129_1000014147 1003
100 3300025294 Ga0209025_1000007 Ga0209025_1000007685 1003
101 3300025297 Ga0209758_1000012 Ga0209758_1000012686 1003
102 3300031731 Ga0307405_10000016 Ga0307405_1000001616 1003
103 3300031903 Ga0307407_10000012 Ga0307407_10000012120 1003
104 3300031995 Ga0307409_100002580 Ga0307409_1000025805 1003
105 3300032002 Ga0307416_100000024 Ga0307416_1000000244 1003
106 iso_pu_bacteria 2738541284 2738761861 1003
107 iso_pu_bacteria 2738543023 2739302216 1003
108 iso_pu_bacteria 2919186247 2919188694 1003
109 iso_pu_bacteria 2939664404 2939667151 1003
110 3300013100 Ga0157373_10004966 Ga0157373_100049662 1004
111 3300013306 Ga0163162_10000036 Ga0163162_100000362 1004
112 3300013308 Ga0157375_10019605 Ga0157375_100196052 1004
113 3300014497 Ga0182008_10000122 Ga0182008_100001223 1004
114 3300015682 Ga0183373_1009 Ga0183373_100967 1004
115 3300017792 Ga0163161_10007089 Ga0163161_100070895 1004
116 3300017792 Ga0163161_10021720 Ga0163161_100217202 1004
117 3300032004 Ga0307414_10002249 Ga0307414_100022497 1004
118 3300046512 Ga0495610_0000289 Ga0495610_0000289_11043_14078 1004
119 iso_pu_bacteria 2852627209 2852631117 1004
120 3300009545 Ga0105237_10004705 Ga0105237_100047056 1005
121 3300025914 Ga0207671_10001386 Ga0207671_100013869 1005
122 3300028786 Ga0307517_10000207 Ga0307517_1000020731 1005
123 3300046518 Ga0495631_0001423 Ga0495631_0001423_3144_6191 1005
124 3300005288 Ga0065714_10003853 Ga0065714_100038532 1006
125 3300005563 Ga0068855_100000098 Ga0068855_10000009819 1006
126 3300025949 Ga0207667_10000014 Ga0207667_10000014124 1006
127 3300044684 Ga0466966_0010590 Ga0466966_0010590_420_3470 1006
128 3300045836 Ga0466958_0011247 Ga0466958_0011247_771_3821 1006
129 iso_pu_bacteria 2977232053 2977235633 1006
130 3300006195 Ga0075366_10000343 Ga0075366_100003437 1008
131 3300050493 nmdc:mga0k408_2349_c1 nmdc:mga0k408_2349_c1_143_3199 1008
132 3300053157 Ga0500624_000433 Ga0500624_000433_1860_4910 1008
133 3300013100 Ga0157373_10001788 Ga0157373_1000178813 1009
134 3300025250 Ga0209026_1000683 Ga0209026_10006832 1009
135 3300028794 Ga0307515_10036445 Ga0307515_100364452 1009
136 3300005614 Ga0068856_100000120 Ga0068856_10000012038 1010
137 3300026078 Ga0207702_10000195 Ga0207702_1000019533 1010
138 iso_pu_bacteria 2852623160 2852625566 1010
139 iso_pu_bacteria 2884933994 2884934570 1010
140 iso_pu_bacteria 2919437846 2919440270 1011
141 3300004799 Ga0058863_10141662 Ga0058863_1014166210 1012
142 3300004800 Ga0058861_10030742 Ga0058861_100307422 1012
143 3300004803 Ga0058862_10002966 Ga0058862_1000296610 1012
144 3300005327 Ga0070658_10000060 Ga0070658_1000006031 1012
145 3300005327 Ga0070658_10024777 Ga0070658_100247772 1012
146 3300005455 Ga0070663_100007093 Ga0070663_1000070932 1012
147 3300005563 Ga0068855_100025917 Ga0068855_1000259173 1012
148 3300009093 Ga0105240_10000371 Ga0105240_1000037162 1012
149 3300009174 Ga0105241_10011132 Ga0105241_100111323 1012
150 3300009545 Ga0105237_10000632 Ga0105237_100006323 1012
151 3300010375 Ga0105239_10003946 Ga0105239_1000394611 1012
152 3300013102 Ga0157371_10001492 Ga0157371_100014928 1012
153 3300013105 Ga0157369_10008712 Ga0157369_100087127 1012
154 3300013307 Ga0157372_10000190 Ga0157372_1000019056 1012
155 3300025250 Ga0209026_1004150 Ga0209026_10041502 1012
156 3300025909 Ga0207705_10000233 Ga0207705_1000023331 1012
157 3300025912 Ga0207707_10022774 Ga0207707_100227742 1012
158 3300025913 Ga0207695_10000142 Ga0207695_1000014221 1012
159 3300025921 Ga0207652_10018817 Ga0207652_100188172 1012
160 3300025949 Ga0207667_10036165 Ga0207667_100361652 1012
161 3300037312 Ga0395899_0000027 Ga0395899_0000027_35908_38958 1012
162 3300037312 Ga0395899_0000325 Ga0395899_0000325_31167_34217 1012
163 3300005328 Ga0070676_10000152 Ga0070676_100001528 1013
164 3300005366 Ga0070659_100000199 Ga0070659_1000001993 1013
165 3300005366 Ga0070659_100022491 Ga0070659_1000224913 1013
166 3300005456 Ga0070678_100006333 Ga0070678_1000063331 1013
167 3300005563 Ga0068855_100000149 Ga0068855_10000014938 1013
168 3300006237 Ga0097621_100013359 Ga0097621_1000133593 1013
169 3300006358 Ga0068871_100000817 Ga0068871_1000008173 1013
170 3300006881 Ga0068865_100001329 Ga0068865_1000013298 1013
171 3300009176 Ga0105242_10033578 Ga0105242_100335782 1013
172 3300009545 Ga0105237_10000535 Ga0105237_100005359 1013
173 3300009551 Ga0105238_10000612 Ga0105238_1000061225 1013
174 3300010375 Ga0105239_10000049 Ga0105239_1000004934 1013
175 3300013100 Ga0157373_10002603 Ga0157373_1000260311 1013
176 3300013102 Ga0157371_10000980 Ga0157371_1000098020 1013
177 3300013104 Ga0157370_10035154 Ga0157370_100351542 1013
178 3300013296 Ga0157374_10035438 Ga0157374_100354382 1013
179 3300013297 Ga0157378_10031067 Ga0157378_100310672 1013
180 3300013306 Ga0163162_10000008 Ga0163162_10000008101 1013
181 3300013307 Ga0157372_10001572 Ga0157372_1000157210 1013
182 3300025261 Ga0209233_1002115 Ga0209233_10021153 1013
183 3300025904 Ga0207647_10000588 Ga0207647_1000058824 1013
184 3300025913 Ga0207695_10003303 Ga0207695_100033034 1013
185 3300025932 Ga0207690_10001029 Ga0207690_1000102911 1013
186 3300025932 Ga0207690_10007709 Ga0207690_100077091 1013
187 3300025938 Ga0207704_10000405 Ga0207704_100004059 1013
188 3300025949 Ga0207667_10000496 Ga0207667_1000049637 1013
189 3300025960 Ga0207651_10001802 Ga0207651_100018026 1013
190 3300026041 Ga0207639_10016424 Ga0207639_100164241 1013
191 3300026089 Ga0207648_10001141 Ga0207648_1000114112 1013
192 3300037312 Ga0395899_0004227 Ga0395899_0004227_3081_6143 1013
193 3300037418 Ga0395900_0002481 Ga0395900_0002481_15727_18771 1013
194 3300037418 Ga0395900_0018754 Ga0395900_0018754_3375_6422 1013
195 3300037471 Ga0395905_0000729 Ga0395905_0000729_18403_21465 1013
196 3300037471 Ga0395905_0005514 Ga0395905_0005514_3222_6269 1013
197 3300038443 Ga0395901_0003992 Ga0395901_0003992_7544_10591 1013
198 3300038443 Ga0395901_0023950 Ga0395901_0023950_2028_5090 1013
199 3300009545 Ga0105237_10002670 Ga0105237_1000267015 1014
200 3300010375 Ga0105239_10000086 Ga0105239_100000867 1014
201 3300028800 Ga0265338_10011554 Ga0265338_100115542 1014
202 3300002737 JGI25162J39368_1000203 JGI25162J39368_100020339 1015
203 3300010375 Ga0105239_10038203 Ga0105239_100382031 1015
204 3300010375 Ga0105239_10068474 Ga0105239_100684741 1015
205 3300013306 Ga0163162_10031080 Ga0163162_100310802 1015
206 3300025233 Ga0209437_100102 Ga0209437_10010224 1015
207 3300025949 Ga0207667_10011989 Ga0207667_100119893 1015
208 3300047472 Ga0495686_0014648 Ga0495686_0014648_242_3304 1015
209 3300046524 Ga0495648_0022587 Ga0495648_0022587_820_3876 1016
210 3300053156 Ga0500622_0001867 Ga0500622_0001867_12633_15692 1016
211 iso_pu_bacteria 2599185184 2599479677 1016
212 iso_pu_bacteria 2928078545 2928083767 1016
213 iso_pu_bacteria 2928147474 2928152208 1016
214 iso_pu_bacteria 2932082852 2932084771 1016
215 3300006195 Ga0075366_10000422 Ga0075366_100004223 1017
216 3300028794 Ga0307515_10105401 Ga0307515_101054012 1017
217 3300033179 Ga0307507_10002394 Ga0307507_1000239412 1017
218 3300046492 Ga0495585_0000642 Ga0495585_0000642_23013_26069 1017
219 3300046524 Ga0495648_0019742 Ga0495648_0019742_341_3397 1017
220 3300046558 Ga0495633_0000026 Ga0495633_0000026_115066_118122 1017
221 3300046616 Ga0495668_0000054 Ga0495668_0000054_85449_88505 1017
222 3300046660 Ga0495625_0001942 Ga0495625_0001942_15174_18230 1017
223 3300050493 nmdc:mga0k408_82_c1 nmdc:mga0k408_82_c1_27202_30258 1017
224 3300001990 JGI24737J22298_10000333 JGI24737J22298_100003332 1020
225 3300002067 JGI24735J21928_10000003 JGI24735J21928_1000000389 1020
226 3300003316 rootH1_10032121 rootH1_100321213 1020
227 3300020077 Ga0206351_10385577 Ga0206351_103855772 1020
228 3300046471 Ga0495650_0000107 Ga0495650_0000107_149348_152410 1020
229 3300046492 Ga0495585_0000753 Ga0495585_0000753_6570_9632 1020
230 3300046507 Ga0495606_0000303 Ga0495606_0000303_32490_35552 1020
231 3300046513 Ga0495616_0004837 Ga0495616_0004837_4508_7570 1020
232 3300046558 Ga0495633_0003813 Ga0495633_0003813_6563_9625 1020
233 3300046660 Ga0495625_0000021 Ga0495625_0000021_71897_74959 1020
234 3300046694 Ga0495649_0000009 Ga0495649_0000009_384568_387630 1020
235 3300047443 Ga0495687_003939 Ga0495687_003939_82_3144 1020
236 3300050493 nmdc:mga0k408_1446_c1 nmdc:mga0k408_1446_c1_4311_7373 1020

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13247

Fer4_11

4Fe-4S dicluster domain

844

910

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3plx-assembly1.cif.gz_B the crystal structure of aspartate alpha-decarboxylase from campylobacter jejuni subsp. jejuni nctc 11168 0.9346 612 645
6p1y-assembly1.cif.gz_B crystal structure of mtb aspartate decarboxylase mutant m117i 0.8472 612 651
6oz8-assembly1.cif.gz_D crystal structure of mtb aspartate decarboxylase in active form 0.8424 612 651
6lod-assembly1.cif.gz_B cryo-em structure of the air-oxidized photosynthetic alternative complex iii from roseiflexus castenholzii 0.8324 68 1014
6btm-assembly1.cif.gz_B structure of alternative complex iii from flavobacterium johnsoniae (wild type) 0.8302 70 1012
ID Description Score Start End Superfamily
3plxB00 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.9346 612 645 2.40.40.20
af_Q2FVV9_812_944_2.40.40.20 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.895 608 656 2.40.40.20
af_Q8NB90_50_135_2.40.40.20 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.858 607 653 2.40.40.20
1tmoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8442 405 458 3.40.50.740
2eeoB00 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.8398 612 651 2.40.40.20
ID Description Score Start End GO Terms
AF-A0A520C577-F1-model_v4 Molybdopterin oxidoreductase 0.9893 137 474
AF-A0A520C577-F1-model_v4 Molybdopterin oxidoreductase 0.9835 137 474
AF-A0A519YMT1-F1-model_v4 Molybdopterin oxidoreductase 0.9741 262 608
AF-A0A519YMT1-F1-model_v4 Molybdopterin oxidoreductase 0.9713 262 608
AF-A0A2V9C854-F1-model_v4 Molybdopterin oxidoreductase 0.9693 333 518

Feature Viewer

pLDDT pTM Quality
75.86 0.83 High
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Predicted Structure (AlphaFold2)

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