F348942

General Info

Members Datasets Scaffolds Average Seq Length
236 109 470 273

Family's Representative Sequence

Representative Sequence 3300005844|Ga0068862_100036464|Ga0068862_1000364642
Length 298
Sequence VRESRTNLAAAVTLLPQVVQNDSLMTEAGTPQVVAATRRWLKPVIYVLLRGGITWREFSDLAKAAYIEVAMARFGKRGRPTNVSRTAMLTGLTRRDVRLVRERLSSAVAADSVPYASKASQILTAWHLEPRFRDAKGKPARLRLTGSGATFEELLKHCGAGDVRPITVLKELVHAGAVRQGKDGRLQVLRRNYIPQMTDEQLIRLWGTVLADVANVYVHNMSRGPRAQTRFERAAKNDRIPVAAEPAFREFLEQEGQAFLERIDAWLSEHQAREDEARSTTRTTRMGAGVYHIHDDQT

Samples

Sample ID Description Type Environment
1 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
32 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
74 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
75 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
76 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
77 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
82 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
83 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
88 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
89 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
90 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
91 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
92 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
93 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
94 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
95 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
96 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
97 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
98 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
99 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
100 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
101 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
102 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
103 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
104 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
105 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
106 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
107 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
108 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
109 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.15
Metatranscriptomes 0.85
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.39
Nodule 0
Rhizoplane 1.69
Rhizosphere 76.69
Stem 0
Stem Tuber 0
Unclassified 20.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068862_100036464 3300005844 Bacteria 4168
2 SwRhRL3b_contig_3931960 2162886006 Bacteria 2932
3 JGI25406J46586_10000984 3300003203 Bacteria 13398
4 JGI25406J46586_10002964 3300003203 Bacteria 8006
5 JGI25406J46586_10009838 3300003203 Bacteria 4270
6 JGI25406J46586_10017245 3300003203 Bacteria 2990
7 rootH2_10024726 3300003320 Bacteria 1470
8 rootL2_10094337 3300003322 Bacteria 4707
9 rootL2_10176486 3300003322 Bacteria 1546
10 rootL2_10345078 3300003322 Bacteria 1234
11 rootH1_10008567 3300003323 Unclassified 2402
12 rootH1_10013248 3300003323 Bacteria 25522
13 rootH1_10296247 3300003323 Bacteria 2039
14 Ga0065707_10081933 3300005295 Bacteria 28910
15 Ga0068869_100275659 3300005334 Bacteria 1351
16 Ga0070666_10015631 3300005335 Bacteria 4843
17 Ga0070666_10191108 3300005335 Bacteria 1439
18 Ga0070680_100010479 3300005336 Bacteria 7148
19 Ga0070680_100014041 3300005336 Bacteria 6254
20 Ga0070671_100000128 3300005355 Bacteria 48658
21 Ga0070667_100000869 3300005367 Bacteria 28061
22 Ga0070667_100023406 3300005367 Bacteria 5124
23 Ga0070709_10117245 3300005434 Bacteria 1799
24 Ga0070713_100045407 3300005436 Bacteria 3600
25 Ga0070713_100649091 3300005436 Unclassified 1005
26 Ga0070681_10001631 3300005458 Bacteria 20007
27 Ga0070681_10001904 3300005458 Bacteria 18827
28 Ga0070681_10006076 3300005458 Bacteria 11710
29 Ga0070681_10027355 3300005458 Bacteria 5734
30 Ga0070681_10030929 3300005458 Bacteria 5373
31 Ga0070679_100003610 3300005530 Bacteria 14140
32 Ga0070679_100067671 3300005530 Bacteria 3562
33 Ga0070665_100001211 3300005548 Bacteria 31471
34 Ga0070665_100012460 3300005548 Bacteria 8572
35 Ga0070665_100017743 3300005548 Bacteria 7148
36 Ga0070665_100041593 3300005548 Unclassified 4620
37 Ga0070665_100045138 3300005548 Bacteria 4425
38 Ga0070665_100050599 3300005548 Bacteria 4169
39 Ga0070665_100256860 3300005548 Bacteria 1748
40 Ga0068855_100002815 3300005563 Bacteria 21413
41 Ga0068855_100007663 3300005563 Bacteria 13053
42 Ga0068855_100009046 3300005563 Bacteria 12034
43 Ga0068855_100052861 3300005563 Bacteria 4781
44 Ga0068856_100046429 3300005614 Unclassified 4278
45 Ga0068856_100246717 3300005614 Bacteria 1801
46 Ga0068859_100050616 3300005617 Bacteria 4173
47 Ga0068859_100149401 3300005617 Bacteria 2412
48 Ga0068864_100291689 3300005618 Bacteria 1525
49 Ga0068861_100064506 3300005719 Unclassified 2818
50 Ga0068861_100117149 3300005719 Bacteria 2143
51 Ga0068861_100142726 3300005719 Unclassified 1956
52 Ga0068863_100000851 3300005841 Bacteria 30444
53 Ga0068858_100009174 3300005842 Bacteria 9455
54 Ga0068860_100001262 3300005843 Bacteria 27618
55 Ga0068860_100546764 3300005843 Unclassified 1160
56 Ga0068862_100008183 3300005844 Bacteria 8645
57 Ga0068862_100089176 3300005844 Bacteria 2684
58 Ga0081455_10000066 3300005937 Bacteria 115221
59 Ga0081455_10001456 3300005937 Bacteria 29298
60 Ga0081455_10008573 3300005937 Bacteria 10611
61 Ga0081539_10000018 3300005985 Bacteria 374538
62 Ga0081539_10000045 3300005985 Bacteria 277027
63 Ga0081539_10002041 3300005985 Bacteria 30380
64 Ga0068871_100055700 3300006358 Bacteria 3211
65 Ga0068871_100244173 3300006358 Unclassified 1562
66 Ga0068871_100430826 3300006358 Bacteria 1179
67 Ga0075428_100410874 3300006844 Unclassified 1450
68 Ga0097620_100050616 3300006931 Bacteria 4173
69 Ga0097620_100149401 3300006931 Bacteria 2412
70 Ga0099794_10006152 3300007265 Bacteria 4849
71 Ga0099795_10007310 3300007788 Unclassified 3074
72 Ga0105240_10001550 3300009093 Bacteria 39003
73 Ga0105240_10002783 3300009093 Bacteria 27637
74 Ga0105240_10018345 3300009093 Bacteria 9402
75 Ga0105240_10019080 3300009093 Bacteria 9170
76 Ga0105240_10020037 3300009093 Bacteria 8929
77 Ga0105240_10025399 3300009093 Bacteria 7784
78 Ga0105240_10033132 3300009093 Bacteria 6678
79 Ga0105240_10114691 3300009093 Bacteria 3254
80 Ga0105247_10036578 3300009101 Unclassified 2992
81 Ga0105241_10278055 3300009174 Unclassified 1428
82 Ga0105237_10002382 3300009545 Bacteria 23327
83 Ga0105237_10022766 3300009545 Bacteria 6429
84 Ga0105237_10052738 3300009545 Bacteria 4081
85 Ga0105237_10087583 3300009545 Bacteria 3103
86 Ga0105237_10107004 3300009545 Bacteria 2789
87 Ga0105237_10117849 3300009545 Bacteria 2649
88 Ga0105237_10303148 3300009545 Unclassified 1601
89 Ga0105237_10409039 3300009545 Bacteria 1362
90 Ga0105238_10001414 3300009551 Bacteria 24035
91 Ga0105238_10018252 3300009551 Bacteria 7136
92 Ga0105238_10149988 3300009551 Bacteria 2307
93 Ga0105238_10178817 3300009551 Bacteria 2098
94 Ga0105249_10019913 3300009553 Bacteria 5992
95 Ga0105249_10163292 3300009553 Unclassified 2154
96 Ga0105249_10355573 3300009553 Bacteria 1485
97 Ga0099796_10013647 3300010159 Unclassified 2326
98 Ga0105239_10046991 3300010375 Unclassified 4729
99 Ga0105239_10233426 3300010375 Bacteria 2064
100 Ga0105239_11077584 3300010375 Unclassified 925
101 Ga0157370_10002103 3300013104 Bacteria 24332
102 Ga0157370_10532610 3300013104 Unclassified 1077
103 Ga0157369_10004022 3300013105 Bacteria 17430
104 Ga0157369_10064265 3300013105 Bacteria 3952
105 Ga0157369_10226459 3300013105 Bacteria 1956
106 Ga0157369_10262246 3300013105 Bacteria 1802
107 Ga0157374_10090899 3300013296 Bacteria 2910
108 Ga0157374_10340331 3300013296 Bacteria 1489
109 Ga0157374_10489139 3300013296 Unclassified 1234
110 Ga0157378_10592294 3300013297 Bacteria 1119
111 Ga0157372_10137780 3300013307 Bacteria 2811
112 Ga0163163_10061566 3300014325 Bacteria 3718
113 Ga0163163_10088114 3300014325 Bacteria 3115
114 Ga0157379_10102047 3300014968 Unclassified 2575
115 Ga0157379_10159205 3300014968 Bacteria 2038
116 Ga0157379_10496299 3300014968 Bacteria 1131
117 Ga0157376_10620886 3300014969 Bacteria 1078
118 Ga0206356_10209459 3300020070 Bacteria 3290
119 Ga0224712_10037211 3300022467 Unclassified 1809
120 Ga0207680_10007727 3300025903 Bacteria 5256
121 Ga0207680_10075229 3300025903 Bacteria 2106
122 Ga0207707_10000052 3300025912 Bacteria 117200
123 Ga0207707_10009261 3300025912 Bacteria 8544
124 Ga0207707_10367165 3300025912 Bacteria 1239
125 Ga0207695_10004229 3300025913 Bacteria 19736
126 Ga0207695_10016816 3300025913 Bacteria 8541
127 Ga0207695_10019806 3300025913 Bacteria 7733
128 Ga0207695_10028392 3300025913 Bacteria 6206
129 Ga0207695_10092620 3300025913 Bacteria 3032
130 Ga0207695_10330207 3300025913 Bacteria 1414
131 Ga0207695_10363312 3300025913 Bacteria 1334
132 Ga0207671_10006879 3300025914 Bacteria 10035
133 Ga0207671_10062478 3300025914 Bacteria 2765
134 Ga0207671_10095681 3300025914 Bacteria 2243
135 Ga0207660_10028780 3300025917 Bacteria 3804
136 Ga0207660_10033830 3300025917 Bacteria 3539
137 Ga0207652_10003085 3300025921 Bacteria 13899
138 Ga0207652_10033447 3300025921 Unclassified 4329
139 Ga0207652_10063983 3300025921 Unclassified 3182
140 Ga0207694_10005660 3300025924 Bacteria 9589
141 Ga0207694_10049181 3300025924 Bacteria 3263
142 Ga0207694_10145455 3300025924 Bacteria 1908
143 Ga0207687_10531209 3300025927 Unclassified 985
144 Ga0207700_10011782 3300025928 Bacteria 5597
145 Ga0207689_10395779 3300025942 Unclassified 1151
146 Ga0207661_10016107 3300025944 Bacteria 5511
147 Ga0207667_10001268 3300025949 Bacteria 31682
148 Ga0207667_10002424 3300025949 Bacteria 23372
149 Ga0207667_10003248 3300025949 Bacteria 20059
150 Ga0207667_10029554 3300025949 Bacteria 5942
151 Ga0207667_10316463 3300025949 Bacteria 1594
152 Ga0207667_10594406 3300025949 Unclassified 1116
153 Ga0207667_10674241 3300025949 Bacteria 1038
154 Ga0207712_10120806 3300025961 Bacteria 1982
155 Ga0207712_10185628 3300025961 Unclassified 1637
156 Ga0207668_10623519 3300025972 Unclassified 941
157 Ga0207658_10058551 3300025986 Bacteria 2867
158 Ga0207703_10012745 3300026035 Bacteria 6556
159 Ga0207703_10191027 3300026035 Unclassified 1813
160 Ga0207702_10041919 3300026078 Unclassified 3838
161 Ga0207641_10000106 3300026088 Bacteria 121316
162 Ga0207675_100018563 3300026118 Bacteria 6488
163 Ga0268266_10006599 3300028379 Bacteria 10594
164 Ga0268266_10034337 3300028379 Bacteria 4314
165 Ga0268266_10083980 3300028379 Bacteria 2780
166 Ga0268266_10128348 3300028379 Unclassified 2265
167 Ga0268266_10136892 3300028379 Bacteria 2194
168 Ga0268265_10048609 3300028380 Bacteria 3185
169 Ga0268265_10130126 3300028380 Bacteria 2090
170 Ga0268265_10573987 3300028380 Unclassified 1074
171 Ga0268264_10332551 3300028381 Unclassified 1440
172 Ga0265334_10015621 3300028573 Unclassified 3151
173 Ga0307517_10236654 3300028786 Bacteria 1089
174 Ga0265331_10022552 3300031250 Unclassified 3212
175 Ga0307509_10000016 3300031507 Bacteria 266991
176 Ga0307509_10000036 3300031507 Bacteria 190164
177 Ga0307514_10226525 3300031649 Bacteria 1139
178 Ga0307415_100307175 3300032126 Unclassified 1317
179 Ga0307510_10000006 3300033180 Bacteria 566474
180 Ga0307510_10000048 3300033180 Bacteria 91952
181 Ga0307510_10019158 3300033180 Bacteria 8029
182 Ga0307510_10043689 3300033180 Bacteria 4868
183 Ga0373937_0308222 3300036401 Unclassified 1497
184 Ga0436363_0768951 3300039450 Bacteria 1746
185 Ga0466969_0007818 3300044656 Bacteria 5685
186 Ga0466972_0040195 3300044658 Unclassified 2279
187 Ga0466972_0092203 3300044658 Bacteria 1436
188 Ga0466972_0145223 3300044658 Unclassified 1116
189 Ga0466966_0092691 3300044684 Bacteria 1874
190 Ga0466960_0157414 3300044901 Bacteria 1217
191 Ga0466959_0000752 3300045049 Bacteria 18995
192 Ga0466959_0091552 3300045049 Bacteria 2183
193 Ga0495650_0034618 3300046471 Bacteria 2233
194 Ga0495648_0134349 3300046524 Bacteria 1311
195 Ga0496102_0053195 3300048905 Bacteria 3692
196 Ga0496102_0160340 3300048905 Unclassified 2115
197 Ga0496103_0098376 3300048906 Unclassified 1850
198 Ga0496115_0494200 3300048918 Unclassified 984
199 Ga0496116_0018879 3300048919 Bacteria 5296
200 Ga0496117_0000090 3300048920 Bacteria 206388
201 Ga0496117_0000303 3300048920 Bacteria 85952
202 Ga0496118_0000032 3300048921 Bacteria 330072
203 Ga0496118_0000300 3300048921 Bacteria 85952
204 Ga0496119_0001009 3300048922 Bacteria 36000
205 Ga0496119_0005581 3300048922 Bacteria 11963
206 Ga0496119_0008635 3300048922 Bacteria 8917
207 Ga0496119_0023444 3300048922 Unclassified 4375
208 Ga0496120_0000106 3300048923 Bacteria 140132
209 Ga0496120_0000226 3300048923 Bacteria 96713
210 Ga0496120_0009398 3300048923 Bacteria 6948
211 Ga0496120_0027769 3300048923 Bacteria 3475
212 Ga0496120_0087190 3300048923 Unclassified 1676
213 Ga0496120_0107859 3300048923 Bacteria 1460
214 Ga0496121_0006956 3300048924 Bacteria 13774
215 Ga0496121_0016193 3300048924 Bacteria 7719
216 Ga0496121_0045653 3300048924 Bacteria 3762
217 Ga0496124_0031763 3300048927 Unclassified 4670
218 Ga0496124_0168177 3300048927 Bacteria 1701
219 Ga0496125_0001423 3300048928 Bacteria 34885
220 Ga0496125_0002139 3300048928 Bacteria 26508
221 Ga0496125_0005453 3300048928 Bacteria 14135
222 Ga0496126_0009421 3300048929 Bacteria 10367
223 Ga0496126_0018981 3300048929 Bacteria 6790
224 Ga0496126_0099974 3300048929 Bacteria 2539
225 Ga0496126_0243383 3300048929 Bacteria 1502
226 Ga0501070_0353027 3300049586 Bacteria 1193
227 nmdc:mga0a205_157967_c2 3300050515 Unclassified 1442
228 Ga0500583_0012302 3300053092 Unclassified 3260
229 Ga0500583_0025572 3300053092 Bacteria 2523
230 Ga0500641_0204367 3300053096 Unclassified 842
231 Ga0500556_0000480 3300053104 Bacteria 27860
232 Ga0500658_0017876 3300053134 Bacteria 2653
233 Ga0500588_0022622 3300053146 Bacteria 1714
234 Ga0500616_0000163 3300053153 Bacteria 111074
235 Ga0500637_0126730 3300053178 Bacteria 1481
236 Ga0068862_100036464
237 SwRhRL3b_contig_3931960
238 JGI25406J46586_10000984
239 JGI25406J46586_10002964
240 JGI25406J46586_10009838
241 JGI25406J46586_10017245
242 rootH2_10024726
243 rootL2_10094337
244 rootL2_10176486
245 rootL2_10345078
246 rootH1_10008567
247 rootH1_10013248
248 rootH1_10296247
249 Ga0065707_10081933
250 Ga0068869_100275659
251 Ga0070666_10015631
252 Ga0070666_10191108
253 Ga0070680_100010479
254 Ga0070680_100014041
255 Ga0070671_100000128
256 Ga0070667_100000869
257 Ga0070667_100023406
258 Ga0070709_10117245
259 Ga0070713_100045407
260 Ga0070713_100649091
261 Ga0070681_10001631
262 Ga0070681_10001904
263 Ga0070681_10006076
264 Ga0070681_10027355
265 Ga0070681_10030929
266 Ga0070679_100003610
267 Ga0070679_100067671
268 Ga0070665_100001211
269 Ga0070665_100012460
270 Ga0070665_100017743
271 Ga0070665_100041593
272 Ga0070665_100045138
273 Ga0070665_100050599
274 Ga0070665_100256860
275 Ga0068855_100002815
276 Ga0068855_100007663
277 Ga0068855_100009046
278 Ga0068855_100052861
279 Ga0068856_100046429
280 Ga0068856_100246717
281 Ga0068859_100050616
282 Ga0068859_100149401
283 Ga0068864_100291689
284 Ga0068861_100064506
285 Ga0068861_100117149
286 Ga0068861_100142726
287 Ga0068863_100000851
288 Ga0068858_100009174
289 Ga0068860_100001262
290 Ga0068860_100546764
291 Ga0068862_100008183
292 Ga0068862_100089176
293 Ga0081455_10000066
294 Ga0081455_10001456
295 Ga0081455_10008573
296 Ga0081539_10000018
297 Ga0081539_10000045
298 Ga0081539_10002041
299 Ga0068871_100055700
300 Ga0068871_100244173
301 Ga0068871_100430826
302 Ga0075428_100410874
303 Ga0097620_100050616
304 Ga0097620_100149401
305 Ga0099794_10006152
306 Ga0099795_10007310
307 Ga0105240_10001550
308 Ga0105240_10002783
309 Ga0105240_10018345
310 Ga0105240_10019080
311 Ga0105240_10020037
312 Ga0105240_10025399
313 Ga0105240_10033132
314 Ga0105240_10114691
315 Ga0105247_10036578
316 Ga0105241_10278055
317 Ga0105237_10002382
318 Ga0105237_10022766
319 Ga0105237_10052738
320 Ga0105237_10087583
321 Ga0105237_10107004
322 Ga0105237_10117849
323 Ga0105237_10303148
324 Ga0105237_10409039
325 Ga0105238_10001414
326 Ga0105238_10018252
327 Ga0105238_10149988
328 Ga0105238_10178817
329 Ga0105249_10019913
330 Ga0105249_10163292
331 Ga0105249_10355573
332 Ga0099796_10013647
333 Ga0105239_10046991
334 Ga0105239_10233426
335 Ga0105239_11077584
336 Ga0157370_10002103
337 Ga0157370_10532610
338 Ga0157369_10004022
339 Ga0157369_10064265
340 Ga0157369_10226459
341 Ga0157369_10262246
342 Ga0157374_10090899
343 Ga0157374_10340331
344 Ga0157374_10489139
345 Ga0157378_10592294
346 Ga0157372_10137780
347 Ga0163163_10061566
348 Ga0163163_10088114
349 Ga0157379_10102047
350 Ga0157379_10159205
351 Ga0157379_10496299
352 Ga0157376_10620886
353 Ga0206356_10209459
354 Ga0224712_10037211
355 Ga0207680_10007727
356 Ga0207680_10075229
357 Ga0207707_10000052
358 Ga0207707_10009261
359 Ga0207707_10367165
360 Ga0207695_10004229
361 Ga0207695_10016816
362 Ga0207695_10019806
363 Ga0207695_10028392
364 Ga0207695_10092620
365 Ga0207695_10330207
366 Ga0207695_10363312
367 Ga0207671_10006879
368 Ga0207671_10062478
369 Ga0207671_10095681
370 Ga0207660_10028780
371 Ga0207660_10033830
372 Ga0207652_10003085
373 Ga0207652_10033447
374 Ga0207652_10063983
375 Ga0207694_10005660
376 Ga0207694_10049181
377 Ga0207694_10145455
378 Ga0207687_10531209
379 Ga0207700_10011782
380 Ga0207689_10395779
381 Ga0207661_10016107
382 Ga0207667_10001268
383 Ga0207667_10002424
384 Ga0207667_10003248
385 Ga0207667_10029554
386 Ga0207667_10316463
387 Ga0207667_10594406
388 Ga0207667_10674241
389 Ga0207712_10120806
390 Ga0207712_10185628
391 Ga0207668_10623519
392 Ga0207658_10058551
393 Ga0207703_10012745
394 Ga0207703_10191027
395 Ga0207702_10041919
396 Ga0207641_10000106
397 Ga0207675_100018563
398 Ga0268266_10006599
399 Ga0268266_10034337
400 Ga0268266_10083980
401 Ga0268266_10128348
402 Ga0268266_10136892
403 Ga0268265_10048609
404 Ga0268265_10130126
405 Ga0268265_10573987
406 Ga0268264_10332551
407 Ga0265334_10015621
408 Ga0307517_10236654
409 Ga0265331_10022552
410 Ga0307509_10000016
411 Ga0307509_10000036
412 Ga0307514_10226525
413 Ga0307415_100307175
414 Ga0307510_10000006
415 Ga0307510_10000048
416 Ga0307510_10019158
417 Ga0307510_10043689
418 Ga0373937_0308222
419 Ga0436363_0768951
420 Ga0466969_0007818
421 Ga0466972_0040195
422 Ga0466972_0092203
423 Ga0466972_0145223
424 Ga0466966_0092691
425 Ga0466960_0157414
426 Ga0466959_0000752
427 Ga0466959_0091552
428 Ga0495650_0034618
429 Ga0495648_0134349
430 Ga0496102_0053195
431 Ga0496102_0160340
432 Ga0496103_0098376
433 Ga0496115_0494200
434 Ga0496116_0018879
435 Ga0496117_0000090
436 Ga0496117_0000303
437 Ga0496118_0000032
438 Ga0496118_0000300
439 Ga0496119_0001009
440 Ga0496119_0005581
441 Ga0496119_0008635
442 Ga0496119_0023444
443 Ga0496120_0000106
444 Ga0496120_0000226
445 Ga0496120_0009398
446 Ga0496120_0027769
447 Ga0496120_0087190
448 Ga0496120_0107859
449 Ga0496121_0006956
450 Ga0496121_0016193
451 Ga0496121_0045653
452 Ga0496124_0031763
453 Ga0496124_0168177
454 Ga0496125_0001423
455 Ga0496125_0002139
456 Ga0496125_0005453
457 Ga0496126_0009421
458 Ga0496126_0018981
459 Ga0496126_0099974
460 Ga0496126_0243383
461 Ga0501070_0353027
462 nmdc:mga0a205_157967_c2
463 Ga0500583_0012302
464 Ga0500583_0025572
465 Ga0500641_0204367
466 Ga0500556_0000480
467 Ga0500658_0017876
468 Ga0500588_0022622
469 Ga0500616_0000163
470 Ga0500637_0126730

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20112

DUF6502

Family of unknown function (DUF6502)

31

298

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hob-assembly1.cif.gz_A the crystal structure of the zalpha domain from cyprinid herpes virus 3 0.8285 38 82
6l0o-assembly1.cif.gz_A wh domain of human mcm8 0.8047 127 164
4kmf-assembly1.cif.gz_A-2 crystal structure of zalpha domain from carassius auratus pkz in complex with z-dna 0.7992 35 82
2ia2-assembly3.cif.gz_D the crystal structure of a putative transcriptional regulator rha06195 from rhodococcus sp. rha1 0.7962 35 82
3f22-assembly2.cif.gz_C crystal structure of zalpha in complex with d(cgtacg) 0.7952 35 82
ID Description Score Start End Superfamily
af_Q2FUY1_146_230_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9128 57 82 1.10.10.10
af_P0AF20_5_82_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8805 29 82 1.10.10.10
1z6rD01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8515 35 82 1.10.10.10
2xrnA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8487 37 82 1.10.10.10
2p5vF01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8362 38 82 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7Y1TVL6-F1-model_v4 Uncharacterized protein 0.9434 1 82
AF-A0A534CEU9-F1-model_v4 Uncharacterized protein 0.9319 22 82
AF-A0A7Y1TVL6-F1-model_v4 Uncharacterized protein 0.8904 1 82
AF-A0A534AWY2-F1-model_v4 Uncharacterized protein 0.8842 172 269
AF-A0A534AWY2-F1-model_v4 Uncharacterized protein 0.8757 172 269

Map