F348382

General Info

Members Datasets Scaffolds Average Seq Length
235 177 225 382

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0015830|Ga0453684_0015830_6194_7510
Length 438
Sequence LDIDLRQIASVQQLFGWEFIKDLSCRKLGKICSILIKYNLPYLHLGVYLQIWKSIHAGTGKMDIKEFISGSYEQQNQFKSFLPGTINRDWLISDSAVIQLLSEADIKLGELNAFSQLVPDINFFIAMHVSKEATTSSRIEGTQTNIAEALQKLENISPEKRDDWEEVQNYIKAINEAVALLDELPLSNRLLKKTHHTLLQGVRGKNRLPGEFRLSQNWIGGASPADAVFIPPSNDKLPDLMSDFEKFLNNEAIPLPHLIRIGIAHYQFETIHPFLDGNGRIGRLLVTLYLVSKGLLSKPTLYLSAFLEKNKSLYYDNLTRVRTHNDLTQWLKFFLEGVRQTAENSIQTFRSIIELREKYEKGLIPTLGRKTKSSLEFMHYLYSNPVVDSQQVARALSVNSSTALRMIEDFIALGILVETTGYKRNRIFAFDSYLKLFE

Samples

Sample ID Description Type Environment
1 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
2 2643221558 Rhizobium sp. Root149 Isolate Unclassified
3 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
4 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
5 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
6 2738543023 Pedobacter sp. OK628 Isolate Unclassified
7 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
8 2914759650 Rhizosphaericola mali Isolate Rhizosphere
9 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
10 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
53 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
69 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
100 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
101 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
102 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
103 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
104 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
105 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
106 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
107 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
108 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
109 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
113 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
114 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
115 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
116 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
117 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
120 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
121 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
122 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
123 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
124 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
125 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
126 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
127 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
129 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
130 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
131 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
132 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
133 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
134 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
135 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
138 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
141 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
142 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
143 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
146 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
147 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
155 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
163 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
164 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
165 3300049689 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_A_4_drought Metagenome Rhizosphere
166 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
172 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
175 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
176 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
177 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.32
Metatranscriptomes 0.43
Isolates 4.26

Biome Distribution

Category Percentage (%)
Aerial Root 0.43
Bulb 0
Endosphere 5.53
Nodule 0.43
Rhizoplane 1.7
Rhizosphere 81.7
Stem 0
Stem Tuber 0
Unclassified 10.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10042646 3300003320 Bacteria 6260
2 rootH2_10215209 3300003320 Unclassified 2564
3 rootL2_10032338 3300003322 Bacteria 1446
4 rootH1_10061016 3300003323 Bacteria 1973
5 rootH1_10074674 3300003323 Bacteria 3966
6 rootH1_10087937 3300003323 Bacteria 3154
7 Ga0055540_1021500 3300003792 Bacteria 1673
8 Ga0055531_10033083 3300003794 Bacteria 1673
9 Ga0070658_10003843 3300005327 Bacteria 12310
10 Ga0070676_10000001 3300005328 Bacteria 443830
11 Ga0070676_10018058 3300005328 Bacteria 3906
12 Ga0070670_100000002 3300005331 Bacteria 568775
13 Ga0070692_10088954 3300005345 Bacteria 1675
14 Ga0070673_100176033 3300005364 Bacteria 1829
15 Ga0070667_100000018 3300005367 Bacteria 226033
16 Ga0070703_10000113 3300005406 Bacteria 41936
17 Ga0070714_100000130 3300005435 Bacteria 59277
18 Ga0070705_100008698 3300005440 Bacteria 5027
19 Ga0070700_100101152 3300005441 Bacteria 1899
20 Ga0070694_100048166 3300005444 Bacteria 2866
21 Ga0070708_100005315 3300005445 Bacteria 10209
22 Ga0070698_100088647 3300005471 Bacteria 3079
23 Ga0070699_100207412 3300005518 Bacteria 1744
24 Ga0070699_100276733 3300005518 Bacteria 1503
25 Ga0068853_100132875 3300005539 Viruses 2229
26 Ga0070686_100074318 3300005544 Bacteria 2234
27 Ga0070695_100126023 3300005545 Bacteria 1759
28 Ga0070695_100145611 3300005545 Bacteria 1648
29 Ga0070693_100020775 3300005547 Bacteria 3469
30 Ga0070693_100027191 3300005547 Bacteria 3097
31 Ga0070665_100005321 3300005548 Bacteria 13295
32 Ga0070704_100123492 3300005549 Bacteria 1993
33 Ga0068855_100011894 3300005563 Bacteria 10522
34 Ga0068854_100025895 3300005578 Bacteria 4026
35 Ga0068856_100007674 3300005614 Bacteria 10525
36 Ga0068856_100013444 3300005614 Bacteria 7922
37 Ga0068859_100005317 3300005617 Bacteria 13091
38 Ga0068859_100020027 3300005617 Bacteria 6718
39 Ga0068859_100153427 3300005617 Bacteria 2379
40 Ga0068864_100000003 3300005618 Bacteria 568775
41 Ga0068864_100270943 3300005618 Bacteria 1582
42 Ga0068851_10081560 3300005834 Bacteria 1690
43 Ga0068863_100000515 3300005841 Bacteria 39374
44 Ga0068863_100011296 3300005841 Bacteria 8648
45 Ga0068858_100253343 3300005842 Bacteria 1672
46 Ga0068860_100007268 3300005843 Bacteria 11077
47 Ga0068860_100350903 3300005843 Bacteria 1452
48 Ga0068862_100001344 3300005844 Bacteria 22837
49 Ga0081539_10015310 3300005985 Bacteria 5584
50 Ga0081539_10016610 3300005985 Bacteria 5237
51 Ga0075370_10085764 3300006353 Bacteria 1813
52 Ga0075433_10054117 3300006852 Bacteria 3501
53 Ga0075433_10094540 3300006852 Bacteria 2645
54 Ga0075434_100153251 3300006871 Bacteria 2325
55 Ga0075434_100275611 3300006871 Bacteria 1701
56 Ga0075436_100198551 3300006914 Bacteria 1420
57 Ga0097620_100005317 3300006931 Bacteria 13091
58 Ga0097620_100020027 3300006931 Bacteria 6718
59 Ga0097620_100153431 3300006931 Bacteria 2379
60 Ga0105251_10005383 3300009011 Bacteria 8383
61 Ga0105244_10019096 3300009036 Bacteria 3835
62 Ga0105240_10186895 3300009093 Bacteria 2439
63 Ga0105240_10477819 3300009093 Bacteria 1390
64 Ga0114129_10005974 3300009147 Bacteria 17241
65 Ga0114129_10342277 3300009147 Unclassified 1983
66 Ga0105237_10012968 3300009545 Bacteria 8751
67 Ga0105237_10074484 3300009545 Bacteria 3387
68 Ga0105239_10121724 3300010375 Unclassified 2898
69 Ga0157371_10002745 3300013102 Bacteria 16556
70 Ga0157371_10107810 3300013102 Bacteria 1977
71 Ga0157370_10040102 3300013104 Bacteria 4521
72 Ga0157370_10072188 3300013104 Bacteria 3257
73 Ga0157378_10070590 3300013297 Unclassified 3137
74 Ga0157372_10035779 3300013307 Bacteria 5468
75 Ga0157375_10245121 3300013308 Bacteria 1952
76 Ga0157375_10304321 3300013308 Bacteria 1758
77 Ga0163163_10000145 3300014325 Bacteria 74233
78 Ga0157380_10034485 3300014326 Bacteria 3904
79 Ga0183365_10001 3300015684 Bacteria 2090444
80 Ga0163161_10132281 3300017792 Bacteria 1883
81 Ga0209676_1026776 3300025292 Bacteria 1825
82 Ga0209758_1000105 3300025297 Bacteria 221415
83 Ga0209050_1009759 3300025298 Bacteria 4849
84 Ga0209051_1001739 3300025303 Bacteria 17361
85 Ga0209257_1020240 3300025304 Bacteria 2468
86 Ga0207656_10050644 3300025321 Bacteria 1794
87 Ga0207713_1026360 3300025735 Bacteria 2665
88 Ga0207653_10000011 3300025885 Bacteria 160949
89 Ga0207680_10011772 3300025903 Bacteria 4432
90 Ga0207645_10000001 3300025907 Bacteria 442754
91 Ga0207645_10020588 3300025907 Bacteria 4316
92 Ga0207705_10001804 3300025909 Bacteria 16884
93 Ga0207684_10138916 3300025910 Bacteria 2088
94 Ga0207671_10043375 3300025914 Bacteria 3326
95 Ga0207650_10000003 3300025925 Bacteria 1123235
96 Ga0207664_10000053 3300025929 Bacteria 128647
97 Ga0207711_10007824 3300025941 Bacteria 8932
98 Ga0207689_10117323 3300025942 Bacteria 2188
99 Ga0207667_10049907 3300025949 Bacteria 4417
100 Ga0207651_10149640 3300025960 Bacteria 1815
101 Ga0207640_10039898 3300025981 Bacteria 2975
102 Ga0207658_10000004 3300025986 Bacteria 569357
103 Ga0207703_10062149 3300026035 Bacteria 3059
104 Ga0207678_10163457 3300026067 Bacteria 1901
105 Ga0207708_10037103 3300026075 Bacteria 3712
106 Ga0207708_10149757 3300026075 Bacteria 1836
107 Ga0207702_10007004 3300026078 Bacteria 9645
108 Ga0207641_10000759 3300026088 Bacteria 34711
109 Ga0207641_10003503 3300026088 Bacteria 13896
110 Ga0207648_10059451 3300026089 Bacteria 3333
111 Ga0207676_10000003 3300026095 Bacteria 1123235
112 Ga0207698_10070863 3300026142 Bacteria 2763
113 Ga0268266_10004522 3300028379 Bacteria 13289
114 Ga0268265_10000515 3300028380 Bacteria 39605
115 Ga0268265_10117970 3300028380 Bacteria 2181
116 Ga0268264_10002681 3300028381 Bacteria 15540
117 Ga0268264_10247982 3300028381 Bacteria 1653
118 Ga0265337_1001523 3300028556 Bacteria 11373
119 Ga0265337_1006855 3300028556 Unclassified 4326
120 Ga0265337_1032321 3300028556 Bacteria 1548
121 Ga0265326_10015235 3300028558 Bacteria 2233
122 Ga0265319_1010981 3300028563 Unclassified 3744
123 Ga0265319_1017648 3300028563 Bacteria 2707
124 Ga0265334_10012758 3300028573 Bacteria 3526
125 Ga0265318_10035155 3300028577 Bacteria 1928
126 Ga0265336_10005457 3300028666 Bacteria 4686
127 Ga0265336_10006234 3300028666 Unclassified 4315
128 Ga0265336_10030558 3300028666 Bacteria 1677
129 Ga0265338_10001266 3300028800 Bacteria 41690
130 Ga0265338_10028655 3300028800 Bacteria 5547
131 Ga0265338_10152009 3300028800 Unclassified 1797
132 Ga0265330_10045739 3300031235 Bacteria 1930
133 Ga0265320_10000008 3300031240 Bacteria 296209
134 Ga0265320_10004023 3300031240 Bacteria 9665
135 Ga0265325_10002868 3300031241 Bacteria 11493
136 Ga0265327_10000027 3300031251 Bacteria 364541
137 Ga0265327_10003381 3300031251 Bacteria 15346
138 Ga0265316_10073753 3300031344 Unclassified 2628
139 Ga0307408_100006215 3300031548 Bacteria 7932
140 Ga0265313_10019603 3300031595 Bacteria 3758
141 Ga0316575_10014719 3300031665 Bacteria 2941
142 Ga0316575_10048049 3300031665 Bacteria 1696
143 Ga0316579_10065294 3300031691 Bacteria 1717
144 Ga0316576_10036583 3300031727 Bacteria 3509
145 Ga0316578_10022565 3300031728 Bacteria 3510
146 Ga0316577_10055548 3300031733 Bacteria 2209
147 Ga0307412_10013122 3300031911 Bacteria 4848
148 Ga0307414_10015692 3300032004 Bacteria 4579
149 Ga0316583_10008547 3300032133 Bacteria 3692
150 Ga0316585_10005197 3300032137 Bacteria 3668
151 Ga0316580_10004930 3300032139 Bacteria 3880
152 Ga0316588_1002044 3300033528 Bacteria 3455
153 Ga0316574_0021456 3300035398 Bacteria 3835
154 Ga0316582_0039139 3300036647 Bacteria 2950
155 Ga0316584_0020387 3300036712 Bacteria 4806
156 Ga0373925_0000640 3300037068 Bacteria 32919
157 Ga0395900_0256262 3300037418 Bacteria 1749
158 Ga0400490_24811 3300038726 Bacteria 2479
159 Ga0400490_38767 3300038726 Bacteria 2505
160 Ga0400491_00332 3300038727 Bacteria 23089
161 Ga0400485_18991 3300038735 Bacteria 5391
162 Ga0400486_27069 3300038742 Bacteria 4509
163 Ga0400489_66652 3300039093 Bacteria 4242
164 Ga0400489_87160 3300039093 Bacteria 8994
165 Ga0400487_46514 3300039110 Bacteria 7987
166 Ga0439458_0003061 3300042157 Bacteria 3986
167 Ga0451577_0000404 3300042876 Bacteria 78335
168 Ga0451577_0000724 3300042876 Bacteria 51075
169 Ga0453683_0026013 3300044673 Bacteria 3716
170 Ga0453683_0116054 3300044673 Bacteria 1684
171 Ga0453684_0000413 3300044712 Bacteria 174924
172 Ga0453684_0001783 3300044712 Bacteria 57316
173 Ga0453684_0005805 3300044712 Bacteria 24056
174 Ga0453684_0015830 3300044712 Bacteria 11858
175 Ga0453684_0021873 3300044712 Bacteria 9519
176 Ga0453684_0027787 3300044712 Bacteria 8098
177 Ga0453684_0142098 3300044712 Bacteria 2865
178 Ga0451576_0000132 3300045051 Bacteria 190095
179 Ga0451576_0069297 3300045051 Bacteria 3670
180 Ga0451576_0089299 3300045051 Bacteria 3205
181 Ga0495627_004887 3300046453 Bacteria 5515
182 Ga0495638_0019008 3300046460 Bacteria 4551
183 Ga0495583_0000023 3300046506 Bacteria 280019
184 Ga0495621_0008409 3300046539 Bacteria 3094
185 Ga0495633_0000025 3300046558 Bacteria 218627
186 Ga0495633_0000314 3300046558 Bacteria 55070
187 Ga0495661_0077841 3300046665 Bacteria 1920
188 Ga0495670_0008549 3300046691 Bacteria 5040
189 Ga0495676_0032093 3300047321 Bacteria 4437
190 Ga0495686_0000006 3300047472 Bacteria 770778
191 Ga0496102_0101519 3300048905 Bacteria 2673
192 Ga0496103_0011186 3300048906 Bacteria 5313
193 Ga0496103_0031689 3300048906 Bacteria 3223
194 Ga0496112_0115100 3300048915 Bacteria 2660
195 Ga0496118_0008645 3300048921 Bacteria 10479
196 Ga0496125_0019460 3300048928 Bacteria 6402
197 Ga0501291_008075 3300049514 Bacteria 1444
198 Ga0501296_003178 3300049519 Bacteria 1746
199 Ga0501032_0002645 3300049569 Bacteria 13969
200 Ga0501034_0020619 3300049571 Bacteria 6733
201 Ga0501034_0039154 3300049571 Bacteria 4802
202 Ga0501034_0040702 3300049571 Bacteria 4703
203 Ga0501036_0105840 3300049572 Bacteria 2379
204 Ga0501038_0012158 3300049574 Bacteria 7857
205 Ga0501038_0192262 3300049574 Bacteria 1641
206 Ga0501039_0097787 3300049575 Bacteria 2289
207 Ga0501070_0253672 3300049586 Bacteria 1439
208 Ga0501202_003170 3300049652 Bacteria 2804
209 Ga0501223_011659 3300049663 Bacteria 1764
210 Ga0501224_005506 3300049664 Bacteria 1816
211 Ga0501260_004246 3300049689 Bacteria 1317
212 Ga0501261_005508 3300049690 Bacteria 1594
213 Ga0501035_0017331 3300049822 Bacteria 6641
214 Ga0501044_0001841 3300049823 Bacteria 24679
215 nmdc:mga07m45_15033_c1 3300050496 Bacteria 4133
216 nmdc:mga05p37_32410_c1 3300050507 Bacteria 6389
217 nmdc:mga0n895_142137_c1 3300050512 Bacteria 2429
218 nmdc:mga08x19_183234_c1 3300050514 Bacteria 1430
219 nmdc:mga0a205_118260_c1 3300050515 Bacteria 2549
220 nmdc:mga0a205_335499_c1 3300050515 Bacteria 1381
221 nmdc:mga0a205_46685_c1 3300050515 Bacteria 4177
222 Ga0500566_0000001 3300053094 Bacteria 1101031
223 Ga0500555_000042 3300053103 Bacteria 65300
224 Ga0500562_000027 3300053108 Bacteria 100118
225 Ga0500645_002442 3300053730 Bacteria 8271

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300037418 Ga0395900_0256262 Ga0395900_0256262_33_1016 311
2 3300049663 Ga0501223_011659 Ga0501223_011659_294_1283 329
3 3300009093 Ga0105240_10186895 Ga0105240_101868952 347
4 3300048906 Ga0496103_0031689 Ga0496103_0031689_35_1144 347
5 3300005843 Ga0068860_100007268 Ga0068860_1000072685 360
6 3300028381 Ga0268264_10002681 Ga0268264_100026817 360
7 3300049652 Ga0501202_003170 Ga0501202_003170_203_1318 362
8 3300003792 Ga0055540_1021500 Ga0055540_10215001 364
9 3300003794 Ga0055531_10033083 Ga0055531_100330831 364
10 3300025292 Ga0209676_1026776 Ga0209676_10267762 364
11 3300025297 Ga0209758_1000105 Ga0209758_100010589 364
12 3300025298 Ga0209050_1009759 Ga0209050_10097593 364
13 3300025303 Ga0209051_1001739 Ga0209051_100173912 364
14 3300025304 Ga0209257_1020240 Ga0209257_10202402 364
15 3300005328 Ga0070676_10000001 Ga0070676_10000001193 367
16 3300025907 Ga0207645_10000001 Ga0207645_10000001306 367
17 3300032004 Ga0307414_10015692 Ga0307414_100156923 368
18 iso_pu_bacteria 2687453341 2688391951 369
19 3300003323 rootH1_10087937 rootH1_100879372 370
20 3300005327 Ga0070658_10003843 Ga0070658_1000384311 370
21 3300009093 Ga0105240_10477819 Ga0105240_104778191 370
22 3300025909 Ga0207705_10001804 Ga0207705_100018047 370
23 3300028556 Ga0265337_1006855 Ga0265337_10068554 370
24 3300028556 Ga0265337_1032321 Ga0265337_10323212 370
25 3300028666 Ga0265336_10030558 Ga0265336_100305582 370
26 3300028800 Ga0265338_10152009 Ga0265338_101520093 370
27 3300031240 Ga0265320_10004023 Ga0265320_100040235 370
28 3300005445 Ga0070708_100005315 Ga0070708_10000531512 371
29 3300031240 Ga0265320_10000008 Ga0265320_10000008225 371
30 3300037068 Ga0373925_0000640 Ga0373925_0000640_17543_18769 371
31 3300028563 Ga0265319_1017648 Ga0265319_10176482 372
32 3300028666 Ga0265336_10005457 Ga0265336_100054573 372
33 iso_pu_bacteria 2509276022 2509396135 372
34 iso_pu_bacteria 2643221558 2643810684 372
35 iso_pu_bacteria 2643221595 2643984275 372
36 iso_pu_bacteria 2643221627 2644156896 372
37 iso_pu_bacteria 2884634485 2884636709 372
38 iso_pu_bacteria 2916699645 2916701025 372
39 iso_pu_bacteria 2984499530 2984500810 372
40 3300005539 Ga0068853_100132875 Ga0068853_1001328752 373
41 3300005614 Ga0068856_100013444 Ga0068856_1000134444 373
42 3300006852 Ga0075433_10054117 Ga0075433_100541172 373
43 3300009147 Ga0114129_10005974 Ga0114129_1000597415 373
44 3300031344 Ga0265316_10073753 Ga0265316_100737531 373
45 3300048905 Ga0496102_0101519 Ga0496102_0101519_87_1274 373
46 3300050507 nmdc:mga05p37_32410_c1 nmdc:mga05p37_32410_c1_1294_2484 373
47 3300050515 nmdc:mga0a205_46685_c1 nmdc:mga0a205_46685_c1_2052_3242 373
48 3300053094 Ga0500566_0000001 Ga0500566_0000001_921192_922352 373
49 iso_pu_bacteria 2738543023 2739304525 373
50 iso_pu_bacteria 2914759650 2914763112 374
51 3300003320 rootH2_10215209 rootH2_102152093 375
52 3300005440 Ga0070705_100008698 Ga0070705_1000086982 375
53 3300005614 Ga0068856_100007674 Ga0068856_1000076747 375
54 3300028800 Ga0265338_10028655 Ga0265338_100286553 375
55 3300038726 Ga0400490_24811 Ga0400490_24811_1172_2299 375
56 3300038727 Ga0400491_00332 Ga0400491_00332_13774_14910 375
57 3300039110 Ga0400487_46514 Ga0400487_46514_1324_2457 375
58 3300045051 Ga0451576_0000132 Ga0451576_0000132_106616_107773 375
59 3300048915 Ga0496112_0115100 Ga0496112_0115100_1362_2564 375
60 3300049574 Ga0501038_0192262 Ga0501038_0192262_289_1422 375
61 3300003323 rootH1_10061016 rootH1_100610161 376
62 3300003323 rootH1_10074674 rootH1_100746742 376
63 3300005328 Ga0070676_10018058 Ga0070676_100180583 376
64 3300005331 Ga0070670_100000002 Ga0070670_10000000267 376
65 3300005345 Ga0070692_10088954 Ga0070692_100889542 376
66 3300005364 Ga0070673_100176033 Ga0070673_1001760331 376
67 3300005367 Ga0070667_100000018 Ga0070667_10000001866 376
68 3300005406 Ga0070703_10000113 Ga0070703_100001139 376
69 3300005435 Ga0070714_100000130 Ga0070714_10000013025 376
70 3300005441 Ga0070700_100101152 Ga0070700_1001011522 376
71 3300005444 Ga0070694_100048166 Ga0070694_1000481661 376
72 3300005471 Ga0070698_100088647 Ga0070698_1000886473 376
73 3300005518 Ga0070699_100207412 Ga0070699_1002074121 376
74 3300005518 Ga0070699_100276733 Ga0070699_1002767332 376
75 3300005544 Ga0070686_100074318 Ga0070686_1000743183 376
76 3300005545 Ga0070695_100126023 Ga0070695_1001260233 376
77 3300005545 Ga0070695_100145611 Ga0070695_1001456112 376
78 3300005547 Ga0070693_100020775 Ga0070693_1000207752 376
79 3300005547 Ga0070693_100027191 Ga0070693_1000271912 376
80 3300005548 Ga0070665_100005321 Ga0070665_1000053218 376
81 3300005549 Ga0070704_100123492 Ga0070704_1001234922 376
82 3300005563 Ga0068855_100011894 Ga0068855_1000118942 376
83 3300005578 Ga0068854_100025895 Ga0068854_1000258952 376
84 3300005617 Ga0068859_100005317 Ga0068859_1000053174 376
85 3300005617 Ga0068859_100020027 Ga0068859_1000200271 376
86 3300005617 Ga0068859_100153427 Ga0068859_1001534272 376
87 3300005618 Ga0068864_100000003 Ga0068864_10000000368 376
88 3300005618 Ga0068864_100270943 Ga0068864_1002709431 376
89 3300005834 Ga0068851_10081560 Ga0068851_100815601 376
90 3300005841 Ga0068863_100000515 Ga0068863_10000051522 376
91 3300005841 Ga0068863_100011296 Ga0068863_1000112964 376
92 3300005842 Ga0068858_100253343 Ga0068858_1002533431 376
93 3300005843 Ga0068860_100350903 Ga0068860_1003509031 376
94 3300005844 Ga0068862_100001344 Ga0068862_10000134413 376
95 3300005985 Ga0081539_10015310 Ga0081539_100153107 376
96 3300006353 Ga0075370_10085764 Ga0075370_100857642 376
97 3300006852 Ga0075433_10094540 Ga0075433_100945402 376
98 3300006871 Ga0075434_100153251 Ga0075434_1001532511 376
99 3300006871 Ga0075434_100275611 Ga0075434_1002756112 376
100 3300006914 Ga0075436_100198551 Ga0075436_1001985512 376
101 3300006931 Ga0097620_100005317 Ga0097620_1000053174 376
102 3300006931 Ga0097620_100020027 Ga0097620_1000200275 376
103 3300006931 Ga0097620_100153431 Ga0097620_1001534312 376
104 3300009011 Ga0105251_10005383 Ga0105251_100053837 376
105 3300009036 Ga0105244_10019096 Ga0105244_100190962 376
106 3300009147 Ga0114129_10342277 Ga0114129_103422771 376
107 3300009545 Ga0105237_10012968 Ga0105237_100129681 376
108 3300009545 Ga0105237_10074484 Ga0105237_100744841 376
109 3300010375 Ga0105239_10121724 Ga0105239_101217242 376
110 3300013102 Ga0157371_10002745 Ga0157371_100027458 376
111 3300013102 Ga0157371_10107810 Ga0157371_101078102 376
112 3300013308 Ga0157375_10245121 Ga0157375_102451212 376
113 3300014325 Ga0163163_10000145 Ga0163163_1000014537 376
114 3300014326 Ga0157380_10034485 Ga0157380_100344852 376
115 3300015684 Ga0183365_10001 Ga0183365_10001787 376
116 3300017792 Ga0163161_10132281 Ga0163161_101322812 376
117 3300025321 Ga0207656_10050644 Ga0207656_100506442 376
118 3300025735 Ga0207713_1026360 Ga0207713_10263602 376
119 3300025885 Ga0207653_10000011 Ga0207653_1000001152 376
120 3300025903 Ga0207680_10011772 Ga0207680_100117724 376
121 3300025907 Ga0207645_10020588 Ga0207645_100205883 376
122 3300025910 Ga0207684_10138916 Ga0207684_101389162 376
123 3300025914 Ga0207671_10043375 Ga0207671_100433751 376
124 3300025925 Ga0207650_10000003 Ga0207650_10000003622 376
125 3300025929 Ga0207664_10000053 Ga0207664_1000005375 376
126 3300025941 Ga0207711_10007824 Ga0207711_100078244 376
127 3300025942 Ga0207689_10117323 Ga0207689_101173232 376
128 3300025949 Ga0207667_10049907 Ga0207667_100499072 376
129 3300025960 Ga0207651_10149640 Ga0207651_101496402 376
130 3300025981 Ga0207640_10039898 Ga0207640_100398983 376
131 3300025986 Ga0207658_10000004 Ga0207658_1000000470 376
132 3300026035 Ga0207703_10062149 Ga0207703_100621492 376
133 3300026075 Ga0207708_10037103 Ga0207708_100371032 376
134 3300026075 Ga0207708_10149757 Ga0207708_101497572 376
135 3300026078 Ga0207702_10007004 Ga0207702_100070043 376
136 3300026088 Ga0207641_10000759 Ga0207641_100007597 376
137 3300026088 Ga0207641_10003503 Ga0207641_100035037 376
138 3300026089 Ga0207648_10059451 Ga0207648_100594513 376
139 3300026095 Ga0207676_10000003 Ga0207676_10000003472 376
140 3300026142 Ga0207698_10070863 Ga0207698_100708632 376
141 3300028379 Ga0268266_10004522 Ga0268266_100045225 376
142 3300028380 Ga0268265_10000515 Ga0268265_1000051528 376
143 3300028380 Ga0268265_10117970 Ga0268265_101179702 376
144 3300028381 Ga0268264_10247982 Ga0268264_102479822 376
145 3300031251 Ga0265327_10000027 Ga0265327_10000027105 376
146 3300031548 Ga0307408_100006215 Ga0307408_1000062159 376
147 3300031665 Ga0316575_10014719 Ga0316575_100147192 376
148 3300031665 Ga0316575_10048049 Ga0316575_100480492 376
149 3300031691 Ga0316579_10065294 Ga0316579_100652941 376
150 3300031727 Ga0316576_10036583 Ga0316576_100365831 376
151 3300031728 Ga0316578_10022565 Ga0316578_100225655 376
152 3300031733 Ga0316577_10055548 Ga0316577_100555482 376
153 3300031911 Ga0307412_10013122 Ga0307412_100131222 376
154 3300032133 Ga0316583_10008547 Ga0316583_100085472 376
155 3300032137 Ga0316585_10005197 Ga0316585_100051973 376
156 3300032139 Ga0316580_10004930 Ga0316580_100049305 376
157 3300033528 Ga0316588_1002044 Ga0316588_10020442 376
158 3300035398 Ga0316574_0021456 Ga0316574_0021456_1774_2907 376
159 3300036647 Ga0316582_0039139 Ga0316582_0039139_20_1153 376
160 3300036712 Ga0316584_0020387 Ga0316584_0020387_1671_2804 376
161 3300038726 Ga0400490_38767 Ga0400490_38767_188_1324 376
162 3300038735 Ga0400485_18991 Ga0400485_18991_1703_2836 376
163 3300038742 Ga0400486_27069 Ga0400486_27069_659_1792 376
164 3300039093 Ga0400489_66652 Ga0400489_66652_2193_3350 376
165 3300039093 Ga0400489_87160 Ga0400489_87160_5972_7141 376
166 3300042157 Ga0439458_0003061 Ga0439458_0003061_1429_2607 376
167 3300042876 Ga0451577_0000404 Ga0451577_0000404_55153_56310 376
168 3300044673 Ga0453683_0026013 Ga0453683_0026013_2417_3586 376
169 3300044673 Ga0453683_0116054 Ga0453683_0116054_500_1633 376
170 3300044712 Ga0453684_0000413 Ga0453684_0000413_18260_19417 376
171 3300044712 Ga0453684_0021873 Ga0453684_0021873_3408_4547 376
172 3300044712 Ga0453684_0027787 Ga0453684_0027787_6568_7701 376
173 3300045051 Ga0451576_0069297 Ga0451576_0069297_798_1931 376
174 3300045051 Ga0451576_0089299 Ga0451576_0089299_1182_2339 376
175 3300046460 Ga0495638_0019008 Ga0495638_0019008_1792_2925 376
176 3300046506 Ga0495583_0000023 Ga0495583_0000023_168370_169503 376
177 3300046558 Ga0495633_0000314 Ga0495633_0000314_17679_18896 376
178 3300046665 Ga0495661_0077841 Ga0495661_0077841_518_1651 376
179 3300046691 Ga0495670_0008549 Ga0495670_0008549_1702_2835 376
180 3300047321 Ga0495676_0032093 Ga0495676_0032093_947_2080 376
181 3300047472 Ga0495686_0000006 Ga0495686_0000006_64083_65216 376
182 3300048906 Ga0496103_0011186 Ga0496103_0011186_2257_3390 376
183 3300048921 Ga0496118_0008645 Ga0496118_0008645_1708_2841 376
184 3300048928 Ga0496125_0019460 Ga0496125_0019460_3327_4460 376
185 3300049514 Ga0501291_008075 Ga0501291_008075_167_1345 376
186 3300049519 Ga0501296_003178 Ga0501296_003178_239_1417 376
187 3300049571 Ga0501034_0040702 Ga0501034_0040702_3310_4443 376
188 3300049574 Ga0501038_0012158 Ga0501038_0012158_4239_5372 376
189 3300049575 Ga0501039_0097787 Ga0501039_0097787_157_1290 376
190 3300049586 Ga0501070_0253672 Ga0501070_0253672_139_1272 376
191 3300049664 Ga0501224_005506 Ga0501224_005506_57_1235 376
192 3300049689 Ga0501260_004246 Ga0501260_004246_38_1216 376
193 3300049690 Ga0501261_005508 Ga0501261_005508_140_1318 376
194 3300049822 Ga0501035_0017331 Ga0501035_0017331_2515_3648 376
195 3300049823 Ga0501044_0001841 Ga0501044_0001841_4057_5190 376
196 3300050496 nmdc:mga07m45_15033_c1 nmdc:mga07m45_15033_c1_2856_3986 376
197 3300050512 nmdc:mga0n895_142137_c1 nmdc:mga0n895_142137_c1_92_1297 376
198 3300050514 nmdc:mga08x19_183234_c1 nmdc:mga08x19_183234_c1_200_1339 376
199 3300050515 nmdc:mga0a205_118260_c1 nmdc:mga0a205_118260_c1_1189_2394 376
200 3300050515 nmdc:mga0a205_335499_c1 nmdc:mga0a205_335499_c1_44_1183 376
201 3300053103 Ga0500555_000042 Ga0500555_000042_7576_8709 376
202 3300003320 rootH2_10042646 rootH2_100426467 377
203 3300003322 rootL2_10032338 rootL2_100323381 377
204 3300005985 Ga0081539_10016610 Ga0081539_100166106 377
205 3300013104 Ga0157370_10040102 Ga0157370_100401025 377
206 3300013104 Ga0157370_10072188 Ga0157370_100721882 377
207 3300013297 Ga0157378_10070590 Ga0157378_100705904 377
208 3300013307 Ga0157372_10035779 Ga0157372_100357792 377
209 3300013308 Ga0157375_10304321 Ga0157375_103043212 377
210 3300026067 Ga0207678_10163457 Ga0207678_101634571 377
211 3300028556 Ga0265337_1001523 Ga0265337_10015237 377
212 3300028558 Ga0265326_10015235 Ga0265326_100152351 377
213 3300028563 Ga0265319_1010981 Ga0265319_10109811 377
214 3300028573 Ga0265334_10012758 Ga0265334_100127582 377
215 3300028577 Ga0265318_10035155 Ga0265318_100351552 377
216 3300028666 Ga0265336_10006234 Ga0265336_100062342 377
217 3300028800 Ga0265338_10001266 Ga0265338_1000126618 377
218 3300031235 Ga0265330_10045739 Ga0265330_100457392 377
219 3300031241 Ga0265325_10002868 Ga0265325_100028682 377
220 3300031251 Ga0265327_10003381 Ga0265327_100033812 377
221 3300031595 Ga0265313_10019603 Ga0265313_100196033 377
222 3300042876 Ga0451577_0000724 Ga0451577_0000724_31477_32610 377
223 3300044712 Ga0453684_0001783 Ga0453684_0001783_24717_25850 377
224 3300044712 Ga0453684_0005805 Ga0453684_0005805_1453_2589 377
225 3300044712 Ga0453684_0015830 Ga0453684_0015830_6194_7510 377
226 3300044712 Ga0453684_0142098 Ga0453684_0142098_1136_2281 377
227 3300046453 Ga0495627_004887 Ga0495627_004887_700_1833 377
228 3300046539 Ga0495621_0008409 Ga0495621_0008409_313_1449 377
229 3300046558 Ga0495633_0000025 Ga0495633_0000025_142764_143897 377
230 3300049569 Ga0501032_0002645 Ga0501032_0002645_12370_13512 377
231 3300049571 Ga0501034_0020619 Ga0501034_0020619_3310_4449 377
232 3300049571 Ga0501034_0039154 Ga0501034_0039154_3549_4688 377
233 3300049572 Ga0501036_0105840 Ga0501036_0105840_186_1328 377
234 3300053108 Ga0500562_000027 Ga0500562_000027_50135_51268 377
235 3300053730 Ga0500645_002442 Ga0500645_002442_4577_5713 377

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13784

Fic_N

Fic/DOC family N-terminal

98

179

0.97

PF02661

Fic

Fic/DOC family

185

290

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qiz-assembly1.cif.gz_ZA specific features and methylation sites of a plant 80s ribosome 0.9248 325 368
7o7y-assembly1.cif.gz_Ay rabbit 80s ribosome stalled close to the mutated sars-cov-2 slippery site by a pseudoknot (high resolution) 0.9208 325 368
6zp4-assembly1.cif.gz_P sars-cov-2 nsp1 bound to a human 43s preinitiation ribosome complex - state 2 0.9179 325 368
8ppk-assembly1.cif.gz_Z bat-hp-cov nsp1 and eif1 bound to the human 40s small ribosomal subunit 0.9177 324 368
8r57-assembly1.cif.gz_Z cryoem structure of wheat 40s ribosomal subunit, head domain 0.9148 324 368
ID Description Score Start End Superfamily
3r61B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9175 326 356 1.10.10.10
af_B4FSL2_21_108_3.30.63.20 Alpha Beta;2-Layer Sandwich;Guanylate Kinase phosphate binding domain; 0.9168 324 368 3.30.63.20
2ia2D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9095 323 356 1.10.10.10
af_P76540_107_166_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.909 311 359 1.10.10.10
6g18Z00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9079 324 368 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A1R4HGX1-F1-model_v4 Protein adenylyltransferase (EC 2.7.7.108) (AMPylator) 0.9923 1 375 GO:0000287
GO:0005524
GO:0042803
GO:0070733
AF-A0A7Y5G7F9-F1-model_v4 Fic family protein 0.9912 1 324 GO:0005524
AF-A0A3D4TEZ7-F1-model_v4 Cell filamentation protein Fic 0.9906 1 295 GO:0005524
AF-A0A139BRW2-F1-model_v4 Toxin Fic 0.99 1 280 GO:0005524
AF-A0A6I7WUS1-F1-model_v4 Cell filamentation protein Fic 0.9876 36 377 GO:0005524

Feature Viewer

pLDDT pTM Quality
92.83 0.91 High
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Predicted Structure (AlphaFold2)

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