F348295

General Info

Members Datasets Scaffolds Average Seq Length
235 124 470 320

Family's Representative Sequence

Representative Sequence 3300035118|Ga0373954_0028154|Ga0373954_0028154_1185_2345
Length 386
Sequence MISLRTELVWFWHRQLQICGASGAHALLPLLHFAAERENNSGANNREVDVAWWLTLTRARQAAIRLLAFGMNFLVTGGAGFIGSHVCERLLRDGHAVWTFDDLNDFYDPRLKRANLHEIQALARPFEFVQGDLTDAAALYGIFSSVKFDQVIHLAARAGVRPSLQDPALYQRVNVEGTVNLLEAARKHRVKKVIIASSSSVYGVNSRVPFNEGDPIFSAISPYAASKLACEALGHVYHHVYGMDVVLLRLFTVYGPRQRPDLAIRKFTTLIHAGKPIPVFGDGSTERDYTHVADTLEGIMACTQKEFGYQIFNLGESETVKLSRLIELLESAMGKKAIIDRQPAQPGDVPRTYADISKARTLLGYQPHVKIEEGIPKFVDWFRQNQ

Samples

Sample ID Description Type Environment
1 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
58 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
59 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
60 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
61 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
62 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
63 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
73 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
76 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
77 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
78 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
79 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
80 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
81 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
82 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
83 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
84 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
85 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
86 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
87 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
98 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
99 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
100 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
103 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
106 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
107 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
110 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.28
Rhizosphere 96.17
Stem 0
Stem Tuber 0
Unclassified 4.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373954_0028154 3300035118 Bacteria 2582
2 CNXas_1000690 3300000545 Unclassified 2195
3 rootH2_10105276 3300003320 Bacteria 3457
4 rootH1_10273219 3300003323 Bacteria 2533
5 Ga0070683_100322580 3300005329 Unclassified 1470
6 Ga0070689_100017498 3300005340 Bacteria 5266
7 Ga0070689_100094825 3300005340 Bacteria 2356
8 Ga0070689_100168195 3300005340 Bacteria 1775
9 Ga0070675_100232288 3300005354 Unclassified 1609
10 Ga0070714_100021721 3300005435 Bacteria 5253
11 Ga0070713_100104590 3300005436 Bacteria 2458
12 Ga0070711_100003213 3300005439 Bacteria 9489
13 Ga0070705_100158317 3300005440 Bacteria 1511
14 Ga0070694_100054515 3300005444 Bacteria 2709
15 Ga0070681_10028822 3300005458 Bacteria 5579
16 Ga0070681_10067329 3300005458 Bacteria 3550
17 Ga0070685_10032574 3300005466 Bacteria 2920
18 Ga0070707_100435414 3300005468 Bacteria 1272
19 Ga0070679_100175284 3300005530 Unclassified 2117
20 Ga0070686_100005288 3300005544 Bacteria 7136
21 Ga0070686_100047908 3300005544 Bacteria 2705
22 Ga0070686_100091222 3300005544 Bacteria 2038
23 Ga0070704_100285490 3300005549 Bacteria 1369
24 Ga0068855_100058805 3300005563 Bacteria 4500
25 Ga0068855_100084156 3300005563 Bacteria 3684
26 Ga0068855_100452958 3300005563 Bacteria 1400
27 Ga0068857_100010645 3300005577 Bacteria 7999
28 Ga0068857_100113971 3300005577 Bacteria 2431
29 Ga0068859_100006642 3300005617 Bacteria 11748
30 Ga0068859_100085658 3300005617 Bacteria 3197
31 Ga0068864_100044829 3300005618 Bacteria 3793
32 Ga0068864_100132873 3300005618 Bacteria 2238
33 Ga0068863_100076162 3300005841 Bacteria 3174
34 Ga0068863_100192878 3300005841 Bacteria 1958
35 Ga0081455_10178683 3300005937 Bacteria 1609
36 Ga0097621_100206087 3300006237 Bacteria 1709
37 Ga0075428_100006528 3300006844 Bacteria 12971
38 Ga0075428_100403510 3300006844 Bacteria 1465
39 Ga0075430_100112316 3300006846 Bacteria 2272
40 Ga0075431_100084776 3300006847 Bacteria 3271
41 Ga0075431_100322058 3300006847 Bacteria 1559
42 Ga0075431_100351990 3300006847 Bacteria 1480
43 Ga0097620_100006642 3300006931 Bacteria 11748
44 Ga0097620_100085666 3300006931 Bacteria 3197
45 Ga0105240_10003005 3300009093 Bacteria 26542
46 Ga0105240_10348918 3300009093 Bacteria 1679
47 Ga0111539_10069309 3300009094 Bacteria 4164
48 Ga0111539_10485651 3300009094 Bacteria 1439
49 Ga0105245_10029991 3300009098 Bacteria 4809
50 Ga0114129_10773820 3300009147 Unclassified 1227
51 Ga0105242_10023721 3300009176 Bacteria 4837
52 Ga0105238_10018475 3300009551 Bacteria 7095
53 Ga0105238_10025653 3300009551 Bacteria 6008
54 Ga0105238_10219295 3300009551 Bacteria 1878
55 Ga0105238_10304198 3300009551 Bacteria 1579
56 Ga0105249_10080719 3300009553 Bacteria 3022
57 Ga0105246_10135482 3300011119 Bacteria 1845
58 Ga0157370_10189927 3300013104 Bacteria 1907
59 Ga0157370_10239522 3300013104 Bacteria 1679
60 Ga0157374_10024756 3300013296 Bacteria 5382
61 Ga0157375_10000049 3300013308 Bacteria 139586
62 Ga0157375_10088123 3300013308 Unclassified 3158
63 Ga0163163_10000059 3300014325 Bacteria 123393
64 Ga0163163_10032023 3300014325 Bacteria 5078
65 Ga0157376_10606827 3300014969 Bacteria 1090
66 Ga0213876_10000038 3300021384 Bacteria 182431
67 Ga0213876_10003237 3300021384 Bacteria 9342
68 Ga0207707_10021544 3300025912 Bacteria 5634
69 Ga0207707_10063120 3300025912 Bacteria 3224
70 Ga0207695_10044325 3300025913 Bacteria 4732
71 Ga0207663_10004863 3300025916 Bacteria 6722
72 Ga0207687_10116241 3300025927 Bacteria 1993
73 Ga0207664_10015408 3300025929 Bacteria 5548
74 Ga0207686_10169321 3300025934 Bacteria 1539
75 Ga0207670_10056228 3300025936 Bacteria 2663
76 Ga0207670_10161969 3300025936 Bacteria 1670
77 Ga0207667_10030488 3300025949 Bacteria 5834
78 Ga0207667_10047622 3300025949 Bacteria 4537
79 Ga0207667_10550915 3300025949 Bacteria 1166
80 Ga0207702_10053795 3300026078 Bacteria 3409
81 Ga0207641_10188048 3300026088 Bacteria 1896
82 Ga0207641_10244667 3300026088 Bacteria 1673
83 Ga0207641_10294339 3300026088 Bacteria 1531
84 Ga0207674_10005310 3300026116 Bacteria 15326
85 Ga0207674_10076137 3300026116 Bacteria 3364
86 Ga0207674_10243841 3300026116 Bacteria 1744
87 Ga0207675_100398543 3300026118 Bacteria 1356
88 Ga0268265_10253674 3300028380 Bacteria 1560
89 Ga0265337_1000236 3300028556 Bacteria 29892
90 Ga0265337_1001735 3300028556 Bacteria 10536
91 Ga0265337_1002186 3300028556 Bacteria 9148
92 Ga0265337_1005763 3300028556 Bacteria 4864
93 Ga0265337_1015824 3300028556 Unclassified 2456
94 Ga0265337_1020594 3300028556 Bacteria 2065
95 Ga0265337_1024917 3300028556 Bacteria 1824
96 Ga0265337_1028810 3300028556 Bacteria 1664
97 Ga0265326_10016396 3300028558 Bacteria 2141
98 Ga0265319_1000027 3300028563 Bacteria 139786
99 Ga0265319_1019340 3300028563 Bacteria 2544
100 Ga0265319_1052442 3300028563 Bacteria 1343
101 Ga0265334_10010271 3300028573 Bacteria 3952
102 Ga0265334_10052491 3300028573 Bacteria 1560
103 Ga0265334_10065918 3300028573 Bacteria 1357
104 Ga0265318_10018761 3300028577 Bacteria 2816
105 Ga0265322_10025584 3300028654 Bacteria 1688
106 Ga0265336_10000197 3300028666 Bacteria 42107
107 Ga0265338_10000008 3300028800 Bacteria 481542
108 Ga0265338_10000216 3300028800 Bacteria 106591
109 Ga0265338_10000309 3300028800 Bacteria 88345
110 Ga0265338_10000452 3300028800 Bacteria 73214
111 Ga0265338_10001210 3300028800 Bacteria 42701
112 Ga0265338_10001362 3300028800 Bacteria 39764
113 Ga0265338_10001875 3300028800 Bacteria 32929
114 Ga0265338_10002349 3300028800 Bacteria 28553
115 Ga0265338_10002880 3300028800 Bacteria 25108
116 Ga0265338_10003847 3300028800 Bacteria 20833
117 Ga0265338_10004470 3300028800 Bacteria 18866
118 Ga0265338_10011111 3300028800 Bacteria 10436
119 Ga0265338_10013285 3300028800 Bacteria 9310
120 Ga0265338_10025649 3300028800 Bacteria 5975
121 Ga0265338_10032487 3300028800 Bacteria 5089
122 Ga0265338_10033252 3300028800 Bacteria 5008
123 Ga0265338_10039356 3300028800 Bacteria 4461
124 Ga0265338_10047326 3300028800 Bacteria 3929
125 Ga0265338_10056900 3300028800 Bacteria 3463
126 Ga0265338_10185767 3300028800 Bacteria 1580
127 Ga0265324_10000250 3300029957 Bacteria 39869
128 Ga0265324_10001329 3300029957 Bacteria 14465
129 Ga0265324_10005888 3300029957 Bacteria 5208
130 Ga0265324_10033049 3300029957 Bacteria 1806
131 Ga0265324_10038801 3300029957 Bacteria 1651
132 Ga0265320_10000883 3300031240 Bacteria 22591
133 Ga0265320_10001914 3300031240 Bacteria 14713
134 Ga0265320_10002158 3300031240 Bacteria 13806
135 Ga0265320_10011239 3300031240 Bacteria 5280
136 Ga0265320_10017750 3300031240 Bacteria 3942
137 Ga0265340_10041172 3300031247 Bacteria 2273
138 Ga0265340_10052505 3300031247 Bacteria 1971
139 Ga0265339_10006364 3300031249 Bacteria 7763
140 Ga0265339_10033168 3300031249 Bacteria 2909
141 Ga0265339_10132105 3300031249 Bacteria 1276
142 Ga0265331_10044179 3300031250 Bacteria 2156
143 Ga0265327_10001397 3300031251 Bacteria 30785
144 Ga0265327_10001870 3300031251 Bacteria 24380
145 Ga0265316_10006390 3300031344 Bacteria 11264
146 Ga0265316_10008631 3300031344 Bacteria 9436
147 Ga0265316_10029184 3300031344 Bacteria 4539
148 Ga0265316_10091101 3300031344 Bacteria 2326
149 Ga0265316_10194361 3300031344 Bacteria 1506
150 Ga0265316_10230854 3300031344 Bacteria 1363
151 Ga0307513_10005409 3300031456 Bacteria 16885
152 Ga0265313_10009125 3300031595 Bacteria 6483
153 Ga0265313_10019593 3300031595 Bacteria 3759
154 Ga0307406_10079252 3300031901 Bacteria 2178
155 Ga0307412_10067458 3300031911 Bacteria 2429
156 Ga0373928_0001445 3300035084 Bacteria 4614
157 Ga0373929_0003412 3300035085 Bacteria 2865
158 Ga0373944_0004653 3300035089 Bacteria 3583
159 Ga0373949_0001964 3300035090 Bacteria 5506
160 Ga0373932_0000003 3300035112 Bacteria 459351
161 Ga0373956_0015776 3300035119 Bacteria 3167
162 Ga0373956_0021727 3300035119 Bacteria 2739
163 Ga0373943_0055925 3300035170 Bacteria 1956
164 Ga0373962_0010763 3300035242 Bacteria 2286
165 Ga0373931_0000054 3300035691 Bacteria 58930
166 Ga0373927_0002724 3300035695 Bacteria 12886
167 Ga0373933_0077649 3300035724 Bacteria 2030
168 Ga0373947_0021679 3300035725 Bacteria 3720
169 Ga0373937_0334411 3300036401 Bacteria 1434
170 Ga0373925_0000299 3300037068 Bacteria 51930
171 Ga0373925_0010750 3300037068 Bacteria 6636
172 Ga0373925_0079068 3300037068 Bacteria 2498
173 Ga0395901_0214600 3300038443 Bacteria 2013
174 Ga0436365_1700788 3300039437 Bacteria 98783
175 Ga0451577_0001834 3300042876 Bacteria 27087
176 Ga0451577_0297903 3300042876 Bacteria 1462
177 Ga0451577_0355563 3300042876 Unclassified 1329
178 Ga0451577_0559088 3300042876 Bacteria 1039
179 Ga0453684_0005444 3300044712 Bacteria 25211
180 Ga0453684_0021095 3300044712 Bacteria 9762
181 Ga0451576_0022392 3300045051 Bacteria 6851
182 Ga0451576_0037447 3300045051 Bacteria 5139
183 Ga0451576_0055024 3300045051 Bacteria 4164
184 Ga0451576_0125543 3300045051 Bacteria 2674
185 Ga0451576_0283788 3300045051 Bacteria 1731
186 Ga0451576_0586958 3300045051 Bacteria 1171
187 Ga0495592_0000161 3300046454 Bacteria 59388
188 Ga0495629_0350988 3300046459 Unclassified 1006
189 Ga0495582_0050173 3300046473 Bacteria 2299
190 Ga0495664_0050691 3300046477 Bacteria 2465
191 Ga0495608_0177196 3300046511 Bacteria 1350
192 Ga0495618_0001287 3300046514 Bacteria 16938
193 Ga0495628_0000142 3300046516 Bacteria 61312
194 Ga0495628_0046811 3300046516 Unclassified 3434
195 Ga0495630_0000226 3300046517 Bacteria 44816
196 Ga0495630_0023990 3300046517 Bacteria 4510
197 Ga0495630_0035002 3300046517 Bacteria 3752
198 Ga0495630_0044251 3300046517 Bacteria 3327
199 Ga0495630_0053796 3300046517 Bacteria 3015
200 Ga0495666_0004285 3300046526 Bacteria 7198
201 Ga0495652_0085863 3300046529 Bacteria 2585
202 Ga0495640_0044626 3300046533 Bacteria 3081
203 Ga0495586_0000114 3300046535 Bacteria 48074
204 Ga0495586_0000233 3300046535 Bacteria 36840
205 Ga0495586_0011558 3300046535 Bacteria 4696
206 Ga0495586_0069119 3300046535 Bacteria 1927
207 Ga0495645_0000986 3300046543 Bacteria 19405
208 Ga0495634_0023666 3300046642 Bacteria 4315
209 Ga0495634_0025222 3300046642 Bacteria 4165
210 Ga0495599_0009612 3300046678 Bacteria 5916
211 Ga0495599_0013946 3300046678 Unclassified 4975
212 Ga0495599_0041551 3300046678 Bacteria 2887
213 Ga0495647_0014181 3300046681 Bacteria 2774
214 Ga0495658_0025513 3300046683 Bacteria 3159
215 Ga0495613_0004080 3300046689 Bacteria 10914
216 Ga0495613_0014882 3300046689 Bacteria 5774
217 Ga0495674_0000940 3300047319 Bacteria 27835
218 Ga0495674_0103276 3300047319 Bacteria 2423
219 Ga0495676_0023272 3300047321 Bacteria 5379
220 Ga0495676_0059773 3300047321 Bacteria 2991
221 Ga0495676_0206953 3300047321 Bacteria 1360
222 Ga0495680_0093779 3300047322 Bacteria 2247
223 Ga0495680_0221770 3300047322 Bacteria 1349
224 Ga0496107_0032460 3300048910 Bacteria 3732
225 Ga0496112_0493869 3300048915 Bacteria 1160
226 Ga0496115_0012508 3300048918 Bacteria 6390
227 Ga0501033_0047402 3300049570 Bacteria 3195
228 Ga0501047_0095009 3300049581 Bacteria 2860
229 Ga0501080_0533416 3300049742 Bacteria 1046
230 Ga0501035_0256619 3300049822 Bacteria 1483
231 nmdc:mga06r32_181028_c1 3300050510 Bacteria 2093
232 nmdc:mga06r32_20810_c1 3300050510 Bacteria 6045
233 nmdc:mga06r32_36338_c1 3300050510 Bacteria 4653
234 nmdc:mga06r32_99118_c1 3300050510 Bacteria 2857
235 nmdc:mga08y16_55552_c1 3300050511 Bacteria 4137
236 Ga0373954_0028154
237 CNXas_1000690
238 rootH2_10105276
239 rootH1_10273219
240 Ga0070683_100322580
241 Ga0070689_100017498
242 Ga0070689_100094825
243 Ga0070689_100168195
244 Ga0070675_100232288
245 Ga0070714_100021721
246 Ga0070713_100104590
247 Ga0070711_100003213
248 Ga0070705_100158317
249 Ga0070694_100054515
250 Ga0070681_10028822
251 Ga0070681_10067329
252 Ga0070685_10032574
253 Ga0070707_100435414
254 Ga0070679_100175284
255 Ga0070686_100005288
256 Ga0070686_100047908
257 Ga0070686_100091222
258 Ga0070704_100285490
259 Ga0068855_100058805
260 Ga0068855_100084156
261 Ga0068855_100452958
262 Ga0068857_100010645
263 Ga0068857_100113971
264 Ga0068859_100006642
265 Ga0068859_100085658
266 Ga0068864_100044829
267 Ga0068864_100132873
268 Ga0068863_100076162
269 Ga0068863_100192878
270 Ga0081455_10178683
271 Ga0097621_100206087
272 Ga0075428_100006528
273 Ga0075428_100403510
274 Ga0075430_100112316
275 Ga0075431_100084776
276 Ga0075431_100322058
277 Ga0075431_100351990
278 Ga0097620_100006642
279 Ga0097620_100085666
280 Ga0105240_10003005
281 Ga0105240_10348918
282 Ga0111539_10069309
283 Ga0111539_10485651
284 Ga0105245_10029991
285 Ga0114129_10773820
286 Ga0105242_10023721
287 Ga0105238_10018475
288 Ga0105238_10025653
289 Ga0105238_10219295
290 Ga0105238_10304198
291 Ga0105249_10080719
292 Ga0105246_10135482
293 Ga0157370_10189927
294 Ga0157370_10239522
295 Ga0157374_10024756
296 Ga0157375_10000049
297 Ga0157375_10088123
298 Ga0163163_10000059
299 Ga0163163_10032023
300 Ga0157376_10606827
301 Ga0213876_10000038
302 Ga0213876_10003237
303 Ga0207707_10021544
304 Ga0207707_10063120
305 Ga0207695_10044325
306 Ga0207663_10004863
307 Ga0207687_10116241
308 Ga0207664_10015408
309 Ga0207686_10169321
310 Ga0207670_10056228
311 Ga0207670_10161969
312 Ga0207667_10030488
313 Ga0207667_10047622
314 Ga0207667_10550915
315 Ga0207702_10053795
316 Ga0207641_10188048
317 Ga0207641_10244667
318 Ga0207641_10294339
319 Ga0207674_10005310
320 Ga0207674_10076137
321 Ga0207674_10243841
322 Ga0207675_100398543
323 Ga0268265_10253674
324 Ga0265337_1000236
325 Ga0265337_1001735
326 Ga0265337_1002186
327 Ga0265337_1005763
328 Ga0265337_1015824
329 Ga0265337_1020594
330 Ga0265337_1024917
331 Ga0265337_1028810
332 Ga0265326_10016396
333 Ga0265319_1000027
334 Ga0265319_1019340
335 Ga0265319_1052442
336 Ga0265334_10010271
337 Ga0265334_10052491
338 Ga0265334_10065918
339 Ga0265318_10018761
340 Ga0265322_10025584
341 Ga0265336_10000197
342 Ga0265338_10000008
343 Ga0265338_10000216
344 Ga0265338_10000309
345 Ga0265338_10000452
346 Ga0265338_10001210
347 Ga0265338_10001362
348 Ga0265338_10001875
349 Ga0265338_10002349
350 Ga0265338_10002880
351 Ga0265338_10003847
352 Ga0265338_10004470
353 Ga0265338_10011111
354 Ga0265338_10013285
355 Ga0265338_10025649
356 Ga0265338_10032487
357 Ga0265338_10033252
358 Ga0265338_10039356
359 Ga0265338_10047326
360 Ga0265338_10056900
361 Ga0265338_10185767
362 Ga0265324_10000250
363 Ga0265324_10001329
364 Ga0265324_10005888
365 Ga0265324_10033049
366 Ga0265324_10038801
367 Ga0265320_10000883
368 Ga0265320_10001914
369 Ga0265320_10002158
370 Ga0265320_10011239
371 Ga0265320_10017750
372 Ga0265340_10041172
373 Ga0265340_10052505
374 Ga0265339_10006364
375 Ga0265339_10033168
376 Ga0265339_10132105
377 Ga0265331_10044179
378 Ga0265327_10001397
379 Ga0265327_10001870
380 Ga0265316_10006390
381 Ga0265316_10008631
382 Ga0265316_10029184
383 Ga0265316_10091101
384 Ga0265316_10194361
385 Ga0265316_10230854
386 Ga0307513_10005409
387 Ga0265313_10009125
388 Ga0265313_10019593
389 Ga0307406_10079252
390 Ga0307412_10067458
391 Ga0373928_0001445
392 Ga0373929_0003412
393 Ga0373944_0004653
394 Ga0373949_0001964
395 Ga0373932_0000003
396 Ga0373956_0015776
397 Ga0373956_0021727
398 Ga0373943_0055925
399 Ga0373962_0010763
400 Ga0373931_0000054
401 Ga0373927_0002724
402 Ga0373933_0077649
403 Ga0373947_0021679
404 Ga0373937_0334411
405 Ga0373925_0000299
406 Ga0373925_0010750
407 Ga0373925_0079068
408 Ga0395901_0214600
409 Ga0436365_1700788
410 Ga0451577_0001834
411 Ga0451577_0297903
412 Ga0451577_0355563
413 Ga0451577_0559088
414 Ga0453684_0005444
415 Ga0453684_0021095
416 Ga0451576_0022392
417 Ga0451576_0037447
418 Ga0451576_0055024
419 Ga0451576_0125543
420 Ga0451576_0283788
421 Ga0451576_0586958
422 Ga0495592_0000161
423 Ga0495629_0350988
424 Ga0495582_0050173
425 Ga0495664_0050691
426 Ga0495608_0177196
427 Ga0495618_0001287
428 Ga0495628_0000142
429 Ga0495628_0046811
430 Ga0495630_0000226
431 Ga0495630_0023990
432 Ga0495630_0035002
433 Ga0495630_0044251
434 Ga0495630_0053796
435 Ga0495666_0004285
436 Ga0495652_0085863
437 Ga0495640_0044626
438 Ga0495586_0000114
439 Ga0495586_0000233
440 Ga0495586_0011558
441 Ga0495586_0069119
442 Ga0495645_0000986
443 Ga0495634_0023666
444 Ga0495634_0025222
445 Ga0495599_0009612
446 Ga0495599_0013946
447 Ga0495599_0041551
448 Ga0495647_0014181
449 Ga0495658_0025513
450 Ga0495613_0004080
451 Ga0495613_0014882
452 Ga0495674_0000940
453 Ga0495674_0103276
454 Ga0495676_0023272
455 Ga0495676_0059773
456 Ga0495676_0206953
457 Ga0495680_0093779
458 Ga0495680_0221770
459 Ga0496107_0032460
460 Ga0496112_0493869
461 Ga0496115_0012508
462 Ga0501033_0047402
463 Ga0501047_0095009
464 Ga0501080_0533416
465 Ga0501035_0256619
466 nmdc:mga06r32_181028_c1
467 nmdc:mga06r32_20810_c1
468 nmdc:mga06r32_36338_c1
469 nmdc:mga06r32_99118_c1
470 nmdc:mga08y16_55552_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

73

315

0.95

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

73

211

0.9

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

74

378

0.89

PF04321

RmlD_sub_bind

RmlD substrate binding domain

71

333

0.85

PF07993

NAD_binding_4

Male sterility protein

111

313

0.84

PF08659

KR

KR domain

72

227

0.8

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

74

304

0.76

PF00106

adh_short

short chain dehydrogenase

72

247

0.75

PF13460

NAD_binding_10

NAD(P)H-binding

77

250

0.68

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ys8-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (rv3634c) from mycobacterium tuberculosis 0.9255 1 317
4zrn-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (tm0509) with udp-glucose from hyperthermophilic eubacterium thermotoga maritima 0.9244 1 317
6wjb-assembly1.cif.gz_A udp-glcnac c4-epimerase from pseudomonas protegens in complex with nad and udp-glcnac 0.9228 1 311
7ys8-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (rv3634c) from mycobacterium tuberculosis 0.9226 1 317
6dnt-assembly1.cif.gz_A-2 udp-n-acetylglucosamine 4-epimerase from methanobrevibacter ruminantium m1 in complex with udp-n-acetylmuramic acid 0.9218 2 317
ID Description Score Start End Superfamily
5nahA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9534 2 32 3.50.50.60
af_K7VFN4_114_450_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9334 3 316 3.40.50.720
6dntA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9244 2 244 3.40.50.720
af_Q0DDZ4_1_298_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.924 37 315 3.40.50.720
af_K7VFN4_114_450_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.922 3 316 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7S1K1B7-F1-model_v4 NAD(P)-binding domain-containing protein 0.9755 1 315
AF-A0A7W1W9D8-F1-model_v4 GDP-mannose 4,6-dehydratase 0.975 166 313
AF-A0A2M7W6A9-F1-model_v4 Epimerase 0.9712 2 277
AF-A0A2V5LUD6-F1-model_v4 Epimerase 0.9667 185 316
AF-A0A1F5BWD8-F1-model_v4 Epimerase 0.9665 1 287

Map