F348175

General Info

Members Datasets Scaffolds Average Seq Length
235 126 235 468

Family's Representative Sequence

Representative Sequence 3300021361|Ga0213872_10002763|Ga0213872_100027632
Length 472
Sequence MRFFPTLAAALLLVTRLPAGAQSVSPAIPDAPDRTIKLLREDEDWSFLANPANRQDFWDPVKYIRLRDGRNDWFMTISGEAREVWEQIGNDYWGQAPYWNGYLNERYMLGFDVHYGKHVRTFVDFKSGINSYRNGGPRPIDEKKLDFQAAFLQVGTAEGQNFINLRAGIQELEYGSGRLIDVREGPNVRLSFAGVMVKSKIDRWLVDGFAVRPRTDKFGFFDDRPNGQVGFWGVYASRPAPKTSVELYYLGLDRQQATFQRGTAQEVRHTIGGRISRPIATERPGWDFDDEALWQFGTFGSGNIRAWTVATETGYRFTNAPLKPRLSAKADISSGDHPATNTLSTFNPLFPKGDYFGVLATTGPGPINFIDVHPHVELALTHNVVASFDWIVQWRQSLDDGVYNVPGSLIRAGNASEARYVGNRPGMQIRWQKTRHLWFQGDYGIFYAGPFIKQTQPGRNLNYWALWTGYKF

Samples

Sample ID Description Type Environment
1 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
2 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
44 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
65 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
66 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
101 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
102 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
103 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
104 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
105 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
106 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
107 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
108 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
109 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
110 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
113 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
120 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
121 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
124 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
125 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
126 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.3
Metatranscriptomes 1.7
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.98
Rhizosphere 96.17
Stem 0
Stem Tuber 0
Unclassified 0.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10001597 3300005328 Bacteria 11535
2 Ga0070677_10020592 3300005333 Bacteria 2406
3 Ga0068869_100143590 3300005334 Bacteria 1845
4 Ga0070668_100007922 3300005347 Bacteria 7888
5 Ga0070669_100010368 3300005353 Bacteria 6619
6 Ga0070675_100022463 3300005354 Bacteria 5041
7 Ga0070674_100089742 3300005356 Bacteria 2215
8 Ga0070714_100076164 3300005435 Unclassified 2912
9 Ga0070714_100179107 3300005435 Unclassified 1928
10 Ga0070710_10046153 3300005437 Bacteria 2425
11 Ga0070711_100019330 3300005439 Plasmid 4369
12 Ga0070711_100123522 3300005439 Unclassified 1918
13 Ga0070705_100109431 3300005440 Bacteria 1762
14 Ga0070708_100004633 3300005445 Bacteria 10831
15 Ga0070708_100029010 3300005445 Bacteria 4768
16 Ga0070678_100010081 3300005456 Bacteria 5753
17 Ga0070662_100011305 3300005457 Bacteria 5886
18 Ga0068867_100025985 3300005459 Plasmid 4201
19 Ga0068867_100054890 3300005459 Bacteria 2944
20 Ga0070706_100000252 3300005467 Bacteria 65194
21 Ga0070706_100016342 3300005467 Bacteria 6856
22 Ga0070706_100029511 3300005467 Bacteria 5053
23 Ga0070706_100031438 3300005467 Bacteria 4895
24 Ga0070707_100000965 3300005468 Bacteria 28472
25 Ga0070707_100005421 3300005468 Bacteria 11930
26 Ga0070707_100006524 3300005468 Bacteria 10834
27 Ga0070707_100025030 3300005468 Bacteria 5660
28 Ga0070707_100073698 3300005468 Unclassified 3292
29 Ga0070707_100088014 3300005468 Bacteria 3004
30 Ga0070698_100011674 3300005471 Bacteria 9316
31 Ga0070698_100040619 3300005471 Bacteria 4780
32 Ga0070698_100076399 3300005471 Bacteria 3351
33 Ga0070699_100005714 3300005518 Bacteria 10892
34 Ga0070699_100005808 3300005518 Bacteria 10796
35 Ga0070697_100016380 3300005536 Bacteria 5828
36 Ga0070697_100020004 3300005536 Bacteria 5291
37 Ga0070697_100025628 3300005536 Unclassified 4704
38 Ga0070697_100095233 3300005536 Bacteria 2468
39 Ga0070697_100106403 3300005536 Bacteria 2334
40 Ga0070697_100107575 3300005536 Bacteria 2320
41 Ga0070672_100026747 3300005543 Bacteria 4299
42 Ga0070686_100045005 3300005544 Bacteria 2778
43 Ga0070665_100022340 3300005548 Bacteria 6367
44 Ga0070665_100102067 3300005548 Unclassified 2872
45 Ga0070704_100031748 3300005549 Bacteria 3556
46 Ga0070704_100051098 3300005549 Bacteria 2909
47 Ga0068859_100051467 3300005617 Unclassified 4140
48 Ga0068859_100126725 3300005617 Bacteria 2622
49 Ga0068866_10002255 3300005718 Bacteria 7995
50 Ga0068863_100062759 3300005841 Bacteria 3514
51 Ga0068863_100092542 3300005841 Bacteria 2868
52 Ga0068860_100028536 3300005843 Bacteria 5372
53 Ga0070717_10060013 3300006028 Bacteria 3149
54 Ga0070717_10203532 3300006028 Bacteria 1735
55 Ga0070715_10010277 3300006163 Bacteria 3331
56 Ga0070716_100008965 3300006173 Bacteria 4975
57 Ga0070716_100018574 3300006173 Bacteria 3625
58 Ga0070716_100055806 3300006173 Bacteria 2262
59 Ga0070712_100087572 3300006175 Unclassified 2272
60 Ga0097621_100013766 3300006237 Bacteria 6039
61 Ga0068871_100018251 3300006358 Bacteria 5328
62 Ga0068871_100100615 3300006358 Bacteria 2422
63 Ga0075428_100017475 3300006844 Bacteria 7925
64 Ga0075428_100032270 3300006844 Bacteria 5784
65 Ga0075430_100007964 3300006846 Bacteria 8954
66 Ga0075431_100000738 3300006847 Bacteria 28232
67 Ga0075431_100065465 3300006847 Bacteria 3753
68 Ga0075433_10001290 3300006852 Bacteria 18330
69 Ga0075433_10021568 3300006852 Bacteria 5402
70 Ga0075433_10067263 3300006852 Bacteria 3145
71 Ga0075434_100001017 3300006871 Bacteria 22825
72 Ga0075434_100005595 3300006871 Bacteria 11446
73 Ga0075434_100062931 3300006871 Bacteria 3693
74 Ga0075434_100085289 3300006871 Bacteria 3157
75 Ga0075434_100164344 3300006871 Bacteria 2239
76 Ga0075434_100164911 3300006871 Unclassified 2235
77 Ga0075434_100196559 3300006871 Bacteria 2036
78 Ga0075429_100045185 3300006880 Bacteria 3831
79 Ga0075436_100063942 3300006914 Unclassified 2543
80 Ga0097620_100051467 3300006931 Unclassified 4140
81 Ga0097620_100126726 3300006931 Bacteria 2622
82 Ga0099794_10031720 3300007265 Bacteria 2476
83 Ga0099795_10019227 3300007788 Bacteria 2207
84 Ga0111539_10015975 3300009094 Bacteria 9326
85 Ga0111539_10039481 3300009094 Bacteria 5688
86 Ga0111539_10094264 3300009094 Bacteria 3517
87 Ga0105245_10002126 3300009098 Bacteria 17944
88 Ga0105245_10069083 3300009098 Bacteria 3203
89 Ga0105247_10026537 3300009101 Bacteria 3499
90 Ga0114129_10013854 3300009147 Bacteria 11488
91 Ga0114129_10188360 3300009147 Unclassified 2803
92 Ga0105243_10003330 3300009148 Bacteria 13038
93 Ga0105242_10060565 3300009176 Bacteria 3111
94 Ga0105248_10004373 3300009177 Bacteria 15637
95 Ga0105248_10032045 3300009177 Bacteria 5873
96 Ga0105248_10486782 3300009177 Unclassified 1390
97 Ga0105249_10088218 3300009553 Bacteria 2897
98 Ga0099796_10001529 3300010159 Unclassified 4705
99 Ga0105239_10030808 3300010375 Bacteria 5900
100 Ga0157373_10123148 3300013100 Bacteria 1823
101 Ga0157369_10072644 3300013105 Bacteria 3693
102 Ga0157374_10017738 3300013296 Bacteria 6273
103 Ga0157374_10025254 3300013296 Bacteria 5331
104 Ga0157378_10001131 3300013297 Bacteria 24300
105 Ga0163162_10004209 3300013306 Bacteria 13833
106 Ga0163162_10007443 3300013306 Bacteria 10646
107 Ga0163162_10010350 3300013306 Bacteria 9066
108 Ga0163162_10013761 3300013306 Bacteria 7901
109 Ga0163162_10065622 3300013306 Plasmid 3678
110 Ga0157372_10061044 3300013307 Bacteria 4220
111 Ga0157375_10048998 3300013308 Bacteria 4136
112 Ga0157375_10195582 3300013308 Bacteria 2177
113 Ga0157375_10325781 3300013308 Bacteria 1701
114 Ga0163163_10033506 3300014325 Bacteria 4969
115 Ga0157376_10010194 3300014969 Bacteria 6862
116 Ga0157376_10014275 3300014969 Bacteria 5957
117 Ga0213872_10000515 3300021361 Bacteria 30549
118 Ga0213872_10002763 3300021361 Bacteria 10065
119 Ga0213872_10004776 3300021361 Bacteria 7084
120 Ga0213872_10031425 3300021361 Bacteria 2434
121 Ga0213871_10000083 3300021441 Bacteria 8217
122 Ga0207682_10023749 3300025893 Bacteria 2424
123 Ga0207645_10001760 3300025907 Bacteria 17569
124 Ga0207643_10011324 3300025908 Plasmid 4816
125 Ga0207684_10000295 3300025910 Bacteria 71704
126 Ga0207684_10006125 3300025910 Bacteria 10999
127 Ga0207684_10006290 3300025910 Bacteria 10831
128 Ga0207684_10022639 3300025910 Bacteria 5364
129 Ga0207693_10016989 3300025915 Bacteria 5810
130 Ga0207693_10036659 3300025915 Bacteria 3866
131 Ga0207693_10042102 3300025915 Bacteria 3596
132 Ga0207693_10058372 3300025915 Unclassified 3023
133 Ga0207663_10025953 3300025916 Bacteria 3395
134 Ga0207663_10052932 3300025916 Unclassified 2534
135 Ga0207663_10072471 3300025916 Bacteria 2226
136 Ga0207663_10084423 3300025916 Unclassified 2089
137 Ga0207646_10000643 3300025922 Bacteria 45481
138 Ga0207646_10001135 3300025922 Bacteria 33987
139 Ga0207646_10006626 3300025922 Bacteria 11946
140 Ga0207646_10009075 3300025922 Bacteria 9875
141 Ga0207646_10205259 3300025922 Unclassified 1780
142 Ga0207681_10055062 3300025923 Bacteria 2707
143 Ga0207687_10000217 3300025927 Bacteria 39106
144 Ga0207664_10072912 3300025929 Unclassified 2770
145 Ga0207644_10043616 3300025931 Bacteria 3184
146 Ga0207706_10002020 3300025933 Bacteria 19875
147 Ga0207686_10054627 3300025934 Bacteria 2502
148 Ga0207709_10086921 3300025935 Bacteria 2031
149 Ga0207669_10063370 3300025937 Bacteria 2282
150 Ga0207665_10001574 3300025939 Bacteria 15401
151 Ga0207665_10003020 3300025939 Bacteria 11294
152 Ga0207665_10012886 3300025939 Bacteria 5498
153 Ga0207665_10016522 3300025939 Bacteria 4848
154 Ga0207665_10054267 3300025939 Bacteria 2702
155 Ga0207665_10055627 3300025939 Bacteria 2670
156 Ga0207691_10007630 3300025940 Bacteria 10411
157 Ga0207711_10083041 3300025941 Bacteria 2801
158 Ga0207711_10257319 3300025941 Unclassified 1604
159 Ga0207689_10002864 3300025942 Bacteria 15907
160 Ga0207677_10043746 3300026023 Bacteria 2979
161 Ga0207703_10234896 3300026035 Unclassified 1645
162 Ga0207639_10194305 3300026041 Bacteria 1735
163 Ga0207641_10004132 3300026088 Bacteria 12650
164 Ga0207641_10049307 3300026088 Bacteria 3557
165 Ga0207641_10147374 3300026088 Bacteria 2129
166 Ga0207648_10030453 3300026089 Bacteria 4779
167 Ga0207648_10045360 3300026089 Plasmid 3856
168 Ga0207648_10067240 3300026089 Bacteria 3125
169 Ga0207683_10001646 3300026121 Bacteria 20009
170 Ga0209179_1000142 3300027512 Bacteria 7241
171 Ga0209588_1013485 3300027671 Bacteria 2492
172 Ga0207428_10040706 3300027907 Bacteria 3766
173 Ga0207428_10068703 3300027907 Unclassified 2787
174 Ga0268264_10054336 3300028381 Bacteria 3344
175 Ga0268264_10160915 3300028381 Bacteria 2022
176 Ga0265319_1009104 3300028563 Unclassified 4268
177 Ga0265338_10112896 3300028800 Unclassified 2184
178 Ga0265762_1000355 3300030760 Bacteria 7815
179 Ga0265770_1004667 3300030878 Bacteria 1873
180 Ga0265760_10008114 3300031090 Bacteria 3000
181 Ga0265760_10011712 3300031090 Unclassified 2506
182 Ga0242420_016048 3300038996 Unclassified 1300
183 Ga0436360_0039426 3300039438 Bacteria 2222
184 Ga0436360_0586024 3300039438 Bacteria 2310
185 Ga0436360_0692517 3300039438 Bacteria 5591
186 Ga0436361_0042012 3300039447 Bacteria 10833
187 Ga0436361_0072540 3300039447 Bacteria 48941
188 Ga0436361_0177292 3300039447 Bacteria 3805
189 Ga0436361_0185254 3300039447 Bacteria 2146
190 Ga0436361_0407484 3300039447 Bacteria 2640
191 Ga0436361_0541129 3300039447 Bacteria 25419
192 Ga0436361_0696316 3300039447 Bacteria 3343
193 Ga0436363_1466245 3300039450 Bacteria 4221
194 Ga0436363_1551838 3300039450 Bacteria 3981
195 Ga0436362_1006272 3300039453 Bacteria 2972
196 Ga0453683_0046187 3300044673 Bacteria 2731
197 Ga0495585_0053600 3300046492 Unclassified 2232
198 Ga0495594_0000607 3300046499 Bacteria 18448
199 Ga0495596_0026126 3300046500 Bacteria 2355
200 Ga0495644_0000950 3300046523 Bacteria 11975
201 Ga0495642_0010358 3300046528 Unclassified 3571
202 Ga0495625_0064190 3300046660 Unclassified 2591
203 Ga0495636_0039345 3300047318 Unclassified 1958
204 Ga0496102_0039724 3300048905 Bacteria 4253
205 Ga0496104_0107697 3300048907 Unclassified 2671
206 Ga0496105_0008040 3300048908 Bacteria 8197
207 Ga0496106_0047276 3300048909 Bacteria 3238
208 Ga0496112_0357345 3300048915 Unclassified 1403
209 Ga0496115_0063506 3300048918 Bacteria 2979
210 Ga0496115_0106234 3300048918 Unclassified 2305
211 nmdc:mga05p37_291633_c1 3300050507 Bacteria 1942
212 nmdc:mga05p37_47307_c1 3300050507 Bacteria 5291
213 nmdc:mga05p37_6036_c1 3300050507 Bacteria 14264
214 nmdc:mga05p37_676_c3 3300050507 Bacteria 29757
215 nmdc:mga09592_26761_c1 3300050508 Bacteria 4780
216 nmdc:mga09592_7177_c1 3300050508 Bacteria 9059
217 nmdc:mga09592_82237_c1 3300050508 Unclassified 2744
218 nmdc:mga06r32_204_c1 3300050510 Bacteria 47691
219 nmdc:mga06r32_79110_c1 3300050510 Bacteria 3198
220 nmdc:mga08y16_113834_c1 3300050511 Unclassified 2816
221 nmdc:mga08y16_22101_c1 3300050511 Bacteria 6716
222 nmdc:mga08y16_97351_c1 3300050511 Bacteria 3064
223 nmdc:mga0n895_213614_c1 3300050512 Bacteria 1959
224 nmdc:mga0n895_230845_c1 3300050512 Unclassified 1878
225 nmdc:mga0n895_7402_c1 3300050512 Bacteria 9419
226 nmdc:mga0n895_755_c1 3300050512 Bacteria 22891
227 nmdc:mga0n895_79206_c1 3300050512 Bacteria 3272
228 nmdc:mga0rr50_183554_c1 3300050513 Unclassified 1711
229 nmdc:mga0rr50_213497_c1 3300050513 Unclassified 1591
230 nmdc:mga0rr50_349880_c1 3300050513 Bacteria 1243
231 nmdc:mga08x19_106_c1 3300050514 Bacteria 74458
232 nmdc:mga08x19_52969_c1 3300050514 Unclassified 2610
233 nmdc:mga08x19_78044_c1 3300050514 Bacteria 2169
234 nmdc:mga0a205_2365_c1 3300050515 Bacteria 16629
235 nmdc:mga0a205_29603_c1 3300050515 Bacteria 5241

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038996 Ga0242420_016048 Ga0242420_016048_12_1211 399
2 3300050513 nmdc:mga0rr50_349880_c1 nmdc:mga0rr50_349880_c1_10_1215 399
3 3300028800 Ga0265338_10112896 Ga0265338_101128962 408
4 3300046492 Ga0495585_0053600 Ga0495585_0053600_948_2174 408
5 3300025910 Ga0207684_10022639 Ga0207684_100226396 431
6 3300009094 Ga0111539_10015975 Ga0111539_100159757 436
7 3300009147 Ga0114129_10013854 Ga0114129_100138547 436
8 3300014969 Ga0157376_10010194 Ga0157376_100101943 436
9 3300048915 Ga0496112_0357345 Ga0496112_0357345_32_1342 436
10 3300048918 Ga0496115_0063506 Ga0496115_0063506_1072_2382 436
11 3300050513 nmdc:mga0rr50_213497_c1 nmdc:mga0rr50_213497_c1_84_1394 436
12 3300050514 nmdc:mga08x19_78044_c1 nmdc:mga08x19_78044_c1_36_1346 436
13 3300009177 Ga0105248_10486782 Ga0105248_104867821 438
14 3300007265 Ga0099794_10031720 Ga0099794_100317202 439
15 3300006028 Ga0070717_10203532 Ga0070717_102035321 441
16 3300009177 Ga0105248_10004373 Ga0105248_1000437316 441
17 3300013100 Ga0157373_10123148 Ga0157373_101231482 441
18 3300013296 Ga0157374_10025254 Ga0157374_100252543 441
19 3300013306 Ga0163162_10004209 Ga0163162_100042093 441
20 3300013307 Ga0157372_10061044 Ga0157372_100610443 441
21 3300013308 Ga0157375_10195582 Ga0157375_101955822 441
22 3300014969 Ga0157376_10014275 Ga0157376_100142752 441
23 3300039447 Ga0436361_0696316 Ga0436361_0696316_30_1430 441
24 3300021361 Ga0213872_10004776 Ga0213872_100047764 444
25 3300021441 Ga0213871_10000083 Ga0213871_100000834 444
26 3300039438 Ga0436360_0692517 Ga0436360_0692517_3877_5286 444
27 3300039447 Ga0436361_0042012 Ga0436361_0042012_2581_3990 444
28 3300039453 Ga0436362_1006272 Ga0436362_1006272_252_1652 444
29 3300031090 Ga0265760_10008114 Ga0265760_100081143 445
30 3300005468 Ga0070707_100005421 Ga0070707_1000054213 447
31 3300026088 Ga0207641_10049307 Ga0207641_100493072 447
32 3300039447 Ga0436361_0185254 Ga0436361_0185254_529_1944 449
33 3300050508 nmdc:mga09592_26761_c1 nmdc:mga09592_26761_c1_3014_4444 449
34 3300013306 Ga0163162_10007443 Ga0163162_100074437 450
35 3300025908 Ga0207643_10011324 Ga0207643_100113244 450
36 3300026041 Ga0207639_10194305 Ga0207639_101943051 450
37 3300009094 Ga0111539_10094264 Ga0111539_100942642 454
38 3300039447 Ga0436361_0072540 Ga0436361_0072540_47512_48930 454
39 3300050511 nmdc:mga08y16_113834_c1 nmdc:mga08y16_113834_c1_257_1654 454
40 3300005459 Ga0068867_100054890 Ga0068867_1000548902 457
41 3300026089 Ga0207648_10067240 Ga0207648_100672402 457
42 3300006914 Ga0075436_100063942 Ga0075436_1000639422 458
43 3300009148 Ga0105243_10003330 Ga0105243_1000333011 458
44 3300050514 nmdc:mga08x19_52969_c1 nmdc:mga08x19_52969_c1_233_1612 458
45 3300025939 Ga0207665_10054267 Ga0207665_100542672 461
46 3300030760 Ga0265762_1000355 Ga0265762_100035510 462
47 3300044673 Ga0453683_0046187 Ga0453683_0046187_1321_2709 462
48 3300009094 Ga0111539_10039481 Ga0111539_100394813 463
49 3300050507 nmdc:mga05p37_47307_c1 nmdc:mga05p37_47307_c1_3647_5038 463
50 3300050508 nmdc:mga09592_7177_c1 nmdc:mga09592_7177_c1_4227_5618 463
51 3300005356 Ga0070674_100089742 Ga0070674_1000897421 465
52 3300005435 Ga0070714_100076164 Ga0070714_1000761643 465
53 3300005459 Ga0068867_100025985 Ga0068867_1000259851 465
54 3300005468 Ga0070707_100088014 Ga0070707_1000880142 465
55 3300005536 Ga0070697_100095233 Ga0070697_1000952332 465
56 3300005544 Ga0070686_100045005 Ga0070686_1000450052 465
57 3300005841 Ga0068863_100092542 Ga0068863_1000925422 465
58 3300006173 Ga0070716_100018574 Ga0070716_1000185743 465
59 3300006871 Ga0075434_100164911 Ga0075434_1001649112 465
60 3300009553 Ga0105249_10088218 Ga0105249_100882181 465
61 3300025915 Ga0207693_10042102 Ga0207693_100421023 465
62 3300025916 Ga0207663_10052932 Ga0207663_100529322 465
63 3300025929 Ga0207664_10072912 Ga0207664_100729123 465
64 3300025935 Ga0207709_10086921 Ga0207709_100869212 465
65 3300025937 Ga0207669_10063370 Ga0207669_100633702 465
66 3300005467 Ga0070706_100031438 Ga0070706_1000314381 466
67 3300005617 Ga0068859_100051467 Ga0068859_1000514673 466
68 3300006028 Ga0070717_10060013 Ga0070717_100600134 466
69 3300006931 Ga0097620_100051467 Ga0097620_1000514673 466
70 3300013296 Ga0157374_10017738 Ga0157374_100177383 466
71 3300025941 Ga0207711_10083041 Ga0207711_100830412 466
72 3300031090 Ga0265760_10011712 Ga0265760_100117122 466
73 3300050511 nmdc:mga08y16_97351_c1 nmdc:mga08y16_97351_c1_1045_2451 466
74 3300005440 Ga0070705_100109431 Ga0070705_1001094312 468
75 3300009098 Ga0105245_10069083 Ga0105245_100690833 468
76 3300009101 Ga0105247_10026537 Ga0105247_100265374 468
77 3300009176 Ga0105242_10060565 Ga0105242_100605652 468
78 3300010375 Ga0105239_10030808 Ga0105239_100308084 468
79 3300013297 Ga0157378_10001131 Ga0157378_100011315 468
80 3300013306 Ga0163162_10010350 Ga0163162_100103508 468
81 3300013306 Ga0163162_10065622 Ga0163162_100656223 468
82 3300048905 Ga0496102_0039724 Ga0496102_0039724_2468_3874 468
83 3300048909 Ga0496106_0047276 Ga0496106_0047276_212_1618 468
84 3300025939 Ga0207665_10016522 Ga0207665_100165226 470
85 3300039438 Ga0436360_0039426 Ga0436360_0039426_197_1621 470
86 3300039447 Ga0436361_0407484 Ga0436361_0407484_463_1887 470
87 3300039450 Ga0436363_1466245 Ga0436363_1466245_1886_3310 470
88 3300006847 Ga0075431_100065465 Ga0075431_1000654652 471
89 3300021361 Ga0213872_10002763 Ga0213872_100027632 471
90 3300025939 Ga0207665_10003020 Ga0207665_100030202 471
91 3300039447 Ga0436361_0541129 Ga0436361_0541129_7735_9153 471
92 3300048907 Ga0496104_0107697 Ga0496104_0107697_739_2154 471
93 3300050510 nmdc:mga06r32_79110_c1 nmdc:mga06r32_79110_c1_1025_2446 471
94 3300005435 Ga0070714_100179107 Ga0070714_1001791071 472
95 3300005439 Ga0070711_100123522 Ga0070711_1001235222 472
96 3300005471 Ga0070698_100076399 Ga0070698_1000763993 472
97 3300005536 Ga0070697_100025628 Ga0070697_1000256284 472
98 3300005536 Ga0070697_100107575 Ga0070697_1001075752 472
99 3300005543 Ga0070672_100026747 Ga0070672_1000267474 472
100 3300005548 Ga0070665_100102067 Ga0070665_1001020672 472
101 3300005549 Ga0070704_100031748 Ga0070704_1000317481 472
102 3300005549 Ga0070704_100051098 Ga0070704_1000510982 472
103 3300006173 Ga0070716_100055806 Ga0070716_1000558062 472
104 3300006358 Ga0068871_100100615 Ga0068871_1001006152 472
105 3300006844 Ga0075428_100017475 Ga0075428_1000174755 472
106 3300006844 Ga0075428_100032270 Ga0075428_1000322706 472
107 3300006846 Ga0075430_100007964 Ga0075430_1000079645 472
108 3300006847 Ga0075431_100000738 Ga0075431_10000073816 472
109 3300006852 Ga0075433_10001290 Ga0075433_100012902 472
110 3300006852 Ga0075433_10021568 Ga0075433_100215683 472
111 3300006871 Ga0075434_100001017 Ga0075434_10000101715 472
112 3300006871 Ga0075434_100062931 Ga0075434_1000629314 472
113 3300006871 Ga0075434_100085289 Ga0075434_1000852893 472
114 3300006880 Ga0075429_100045185 Ga0075429_1000451853 472
115 3300007788 Ga0099795_10019227 Ga0099795_100192272 472
116 3300009147 Ga0114129_10188360 Ga0114129_101883601 472
117 3300013105 Ga0157369_10072644 Ga0157369_100726443 472
118 3300013308 Ga0157375_10325781 Ga0157375_103257812 472
119 3300014325 Ga0163163_10033506 Ga0163163_100335063 472
120 3300021361 Ga0213872_10000515 Ga0213872_1000051513 472
121 3300021361 Ga0213872_10031425 Ga0213872_100314252 472
122 3300025910 Ga0207684_10006125 Ga0207684_1000612510 472
123 3300025915 Ga0207693_10036659 Ga0207693_100366593 472
124 3300025915 Ga0207693_10058372 Ga0207693_100583722 472
125 3300025916 Ga0207663_10025953 Ga0207663_100259533 472
126 3300025916 Ga0207663_10084423 Ga0207663_100844232 472
127 3300025922 Ga0207646_10001135 Ga0207646_1000113530 472
128 3300025922 Ga0207646_10009075 Ga0207646_100090754 472
129 3300025934 Ga0207686_10054627 Ga0207686_100546271 472
130 3300025939 Ga0207665_10012886 Ga0207665_100128864 472
131 3300025939 Ga0207665_10055627 Ga0207665_100556272 472
132 3300025940 Ga0207691_10007630 Ga0207691_100076303 472
133 3300025941 Ga0207711_10257319 Ga0207711_102573191 472
134 3300026088 Ga0207641_10004132 Ga0207641_100041325 472
135 3300026089 Ga0207648_10045360 Ga0207648_100453604 472
136 3300027907 Ga0207428_10040706 Ga0207428_100407064 472
137 3300027907 Ga0207428_10068703 Ga0207428_100687032 472
138 3300028381 Ga0268264_10054336 Ga0268264_100543362 472
139 3300028381 Ga0268264_10160915 Ga0268264_101609152 472
140 3300028563 Ga0265319_1009104 Ga0265319_10091043 472
141 3300039447 Ga0436361_0177292 Ga0436361_0177292_102_1547 472
142 3300048918 Ga0496115_0106234 Ga0496115_0106234_792_2210 472
143 3300050507 nmdc:mga05p37_6036_c1 nmdc:mga05p37_6036_c1_6433_7851 472
144 3300050507 nmdc:mga05p37_676_c3 nmdc:mga05p37_676_c3_10427_11845 472
145 3300050508 nmdc:mga09592_82237_c1 nmdc:mga09592_82237_c1_705_2123 472
146 3300050510 nmdc:mga06r32_204_c1 nmdc:mga06r32_204_c1_2334_3752 472
147 3300050511 nmdc:mga08y16_22101_c1 nmdc:mga08y16_22101_c1_493_1911 472
148 3300050512 nmdc:mga0n895_213614_c1 nmdc:mga0n895_213614_c1_328_1755 472
149 3300050512 nmdc:mga0n895_7402_c1 nmdc:mga0n895_7402_c1_6372_7790 472
150 3300050512 nmdc:mga0n895_755_c1 nmdc:mga0n895_755_c1_423_1841 472
151 3300050512 nmdc:mga0n895_79206_c1 nmdc:mga0n895_79206_c1_1662_3080 472
152 3300050513 nmdc:mga0rr50_183554_c1 nmdc:mga0rr50_183554_c1_182_1600 472
153 3300050515 nmdc:mga0a205_2365_c1 nmdc:mga0a205_2365_c1_5491_6909 472
154 3300050515 nmdc:mga0a205_29603_c1 nmdc:mga0a205_29603_c1_1503_2921 472
155 3300005467 Ga0070706_100000252 Ga0070706_10000025239 473
156 3300005468 Ga0070707_100000965 Ga0070707_10000096518 473
157 3300006173 Ga0070716_100008965 Ga0070716_1000089654 473
158 3300006871 Ga0075434_100196559 Ga0075434_1001965592 473
159 3300010159 Ga0099796_10001529 Ga0099796_100015294 473
160 3300025910 Ga0207684_10000295 Ga0207684_1000029526 473
161 3300025922 Ga0207646_10000643 Ga0207646_1000064316 473
162 3300025939 Ga0207665_10001574 Ga0207665_100015747 473
163 3300039438 Ga0436360_0586024 Ga0436360_0586024_281_1702 473
164 3300039450 Ga0436363_1551838 Ga0436363_1551838_2533_3954 473
165 3300050514 nmdc:mga08x19_106_c1 nmdc:mga08x19_106_c1_69614_71041 473
166 3300026035 Ga0207703_10234896 Ga0207703_102348961 474
167 3300050507 nmdc:mga05p37_291633_c1 nmdc:mga05p37_291633_c1_206_1636 474
168 3300050512 nmdc:mga0n895_230845_c1 nmdc:mga0n895_230845_c1_71_1600 474
169 3300005437 Ga0070710_10046153 Ga0070710_100461532 475
170 3300005439 Ga0070711_100019330 Ga0070711_1000193301 475
171 3300006175 Ga0070712_100087572 Ga0070712_1000875721 475
172 3300006871 Ga0075434_100164344 Ga0075434_1001643442 475
173 3300009098 Ga0105245_10002126 Ga0105245_100021263 475
174 3300009177 Ga0105248_10032045 Ga0105248_100320455 475
175 3300013306 Ga0163162_10013761 Ga0163162_100137614 475
176 3300025915 Ga0207693_10016989 Ga0207693_100169894 475
177 3300025916 Ga0207663_10072471 Ga0207663_100724712 475
178 3300025927 Ga0207687_10000217 Ga0207687_1000021715 475
179 3300027512 Ga0209179_1000142 Ga0209179_10001426 475
180 3300046499 Ga0495594_0000607 Ga0495594_0000607_9449_10876 475
181 3300046500 Ga0495596_0026126 Ga0495596_0026126_514_1941 475
182 3300046523 Ga0495644_0000950 Ga0495644_0000950_2593_4020 475
183 3300046528 Ga0495642_0010358 Ga0495642_0010358_869_2296 475
184 3300046660 Ga0495625_0064190 Ga0495625_0064190_632_2059 475
185 3300047318 Ga0495636_0039345 Ga0495636_0039345_371_1798 475
186 3300048908 Ga0496105_0008040 Ga0496105_0008040_5627_7054 475
187 3300005445 Ga0070708_100029010 Ga0070708_1000290104 476
188 3300005468 Ga0070707_100073698 Ga0070707_1000736983 476
189 3300025922 Ga0207646_10205259 Ga0207646_102052591 476
190 3300005445 Ga0070708_100004633 Ga0070708_1000046335 477
191 3300005467 Ga0070706_100029511 Ga0070706_1000295115 477
192 3300005468 Ga0070707_100006524 Ga0070707_1000065245 477
193 3300005471 Ga0070698_100040619 Ga0070698_1000406195 477
194 3300005518 Ga0070699_100005808 Ga0070699_1000058086 477
195 3300005536 Ga0070697_100020004 Ga0070697_1000200043 477
196 3300005536 Ga0070697_100106403 Ga0070697_1001064032 477
197 3300005841 Ga0068863_100062759 Ga0068863_1000627593 477
198 3300025910 Ga0207684_10006290 Ga0207684_100062905 477
199 3300025922 Ga0207646_10006626 Ga0207646_100066265 477
200 3300026088 Ga0207641_10147374 Ga0207641_101473742 477
201 3300005467 Ga0070706_100016342 Ga0070706_1000163426 478
202 3300005468 Ga0070707_100025030 Ga0070707_1000250304 478
203 3300005471 Ga0070698_100011674 Ga0070698_1000116746 478
204 3300005518 Ga0070699_100005714 Ga0070699_1000057148 478
205 3300005536 Ga0070697_100016380 Ga0070697_1000163802 478
206 3300006163 Ga0070715_10010277 Ga0070715_100102772 478
207 3300006852 Ga0075433_10067263 Ga0075433_100672632 478
208 3300006871 Ga0075434_100005595 Ga0075434_1000055954 478
209 3300013308 Ga0157375_10048998 Ga0157375_100489982 478
210 3300027671 Ga0209588_1013485 Ga0209588_10134852 478
211 3300030878 Ga0265770_1004667 Ga0265770_10046672 478
212 3300005328 Ga0070676_10001597 Ga0070676_100015979 483
213 3300005333 Ga0070677_10020592 Ga0070677_100205922 483
214 3300005334 Ga0068869_100143590 Ga0068869_1001435901 483
215 3300005347 Ga0070668_100007922 Ga0070668_1000079227 483
216 3300005353 Ga0070669_100010368 Ga0070669_1000103683 483
217 3300005354 Ga0070675_100022463 Ga0070675_1000224635 483
218 3300005456 Ga0070678_100010081 Ga0070678_1000100815 483
219 3300005457 Ga0070662_100011305 Ga0070662_1000113051 483
220 3300005548 Ga0070665_100022340 Ga0070665_1000223406 483
221 3300005617 Ga0068859_100126725 Ga0068859_1001267252 483
222 3300005718 Ga0068866_10002255 Ga0068866_100022553 483
223 3300005843 Ga0068860_100028536 Ga0068860_1000285365 483
224 3300006237 Ga0097621_100013766 Ga0097621_1000137664 483
225 3300006358 Ga0068871_100018251 Ga0068871_1000182513 483
226 3300006931 Ga0097620_100126726 Ga0097620_1001267262 483
227 3300025893 Ga0207682_10023749 Ga0207682_100237492 483
228 3300025907 Ga0207645_10001760 Ga0207645_100017603 483
229 3300025923 Ga0207681_10055062 Ga0207681_100550622 483
230 3300025931 Ga0207644_10043616 Ga0207644_100436162 483
231 3300025933 Ga0207706_10002020 Ga0207706_100020204 483
232 3300025942 Ga0207689_10002864 Ga0207689_1000286414 483
233 3300026023 Ga0207677_10043746 Ga0207677_100437461 483
234 3300026089 Ga0207648_10030453 Ga0207648_100304533 483
235 3300026121 Ga0207683_10001646 Ga0207683_1000164618 483

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13372

Alginate_exp

Alginate export

77

465

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4b61-assembly1.cif.gz_A in meso structure of alginate transporter, alge, from pseudomoas aeruginosa, pao1. crystal form 3. 0.7457 87 483
4xnl-assembly1.cif.gz_A x-ray structure of alge2 0.7412 87 483
4xnk-assembly1.cif.gz_A x-ray structure of alge1 0.7359 87 483
4azl-assembly1.cif.gz_A in meso structure of alginate transporter, alge, from pseudomoas aeruginosa, pao1, crystal form 2. 0.7295 88 483
5iyu-assembly1.cif.gz_A alge_cim 0.7276 87 483
ID Description Score Start End Superfamily
3rbhB00 Mainly Beta;Beta Barrel;Porin; 0.716 87 483 2.40.160.100
3sy9C01 Mainly Beta;Beta Barrel;Porin;Porin 0.6964 85 483 2.40.160.10
3sy9C01 Mainly Beta;Beta Barrel;Porin;Porin 0.6895 85 483 2.40.160.10
3sybA00 Mainly Beta;Beta Barrel;Porin;Porin 0.6757 71 483 2.40.160.10
2odjA01 Mainly Beta;Beta Barrel;Porin;Porin 0.6723 85 483 2.40.160.10
ID Description Score Start End GO Terms
AF-A0A2V9H4Y4-F1-model_v4 Alginate export domain-containing protein 0.9108 254 483
AF-A0A2V9H4Y4-F1-model_v4 Alginate export domain-containing protein 0.8887 254 483
AF-A0A4Q7G806-F1-model_v4 Alginate export family protein 0.886 44 483
AF-A0A4Q7G806-F1-model_v4 Alginate export family protein 0.884 44 483
AF-A0A2V5X8G6-F1-model_v4 Alginate export family protein 0.8789 26 483

Feature Viewer

pLDDT pTM Quality
72.6 0.73 High
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Predicted Structure (AlphaFold2)

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