F348143

General Info

Members Datasets Scaffolds Average Seq Length
235 173 234 277

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_10090339|Ga0157378_100903392
Length 307
Sequence MAISENSSLSVSRQREASGSADSFRENAYESSPLPLTPVIKIRAAKRWTPIGLGEIWAHRELLYFLVWRDLKVRYKQTLLGVSWIVLQPILMTLVFAVFLGKIARVPSDSVPYVLFLYAGLLPWTFFTNAVATSSHSLIASAEMITKVYFPRALVPLAAVLVRLSDFVVASVVLVVLMLYYGRPFTRAILLAPFLILHLTLLALGLGLLFAALNVKYRDIGTVLPVLLQLWLFASPVIYPASLVPPNWQWVYALNPLTGIIGGFRAAFLDLGFDWRSLLVSFAITIVLLVYASFVFRRMEDEFADVV

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
93 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
94 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
97 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
100 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
101 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
102 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
103 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
104 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
113 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
114 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
115 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
121 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
122 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
125 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
126 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
127 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
128 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
135 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
136 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
137 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
146 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
147 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
148 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
149 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
150 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
151 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
152 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
153 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
154 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
155 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
156 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
157 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
158 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
159 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
160 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
171 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
172 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
173 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.57
Metatranscriptomes 0
Isolates 0.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.83
Nodule 0
Rhizoplane 2.55
Rhizosphere 91.06
Stem 0
Stem Tuber 0
Unclassified 2.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10019522 3300003203 Bacteria 2759
2 rootH1_10105105 3300003316 Bacteria 1579
3 Ga0055536_1007417 3300003781 Bacteria 4912
4 Ga0065165_1000385 3300005262 Bacteria 71560
5 Ga0065704_10076366 3300005289 Bacteria 5146
6 Ga0065704_10189262 3300005289 Bacteria 1198
7 Ga0065707_10003076 3300005295 Bacteria 9133
8 Ga0070658_10103346 3300005327 Bacteria 2356
9 Ga0070658_10368719 3300005327 Bacteria 1231
10 Ga0070683_100161361 3300005329 Bacteria 2127
11 Ga0068869_100020591 3300005334 Bacteria 4525
12 Ga0070680_100040751 3300005336 Bacteria 3763
13 Ga0070680_100133603 3300005336 Bacteria 2077
14 Ga0070682_100308978 3300005337 Bacteria 1163
15 Ga0070660_100001629 3300005339 Bacteria 15431
16 Ga0070671_100114456 3300005355 Bacteria 2267
17 Ga0070667_100000747 3300005367 Bacteria 31092
18 Ga0070713_100001270 3300005436 Bacteria 16131
19 Ga0070713_100327542 3300005436 Bacteria 1416
20 Ga0070705_100035010 3300005440 Bacteria 2811
21 Ga0070694_100052894 3300005444 Bacteria 2746
22 Ga0070694_100383273 3300005444 Bacteria 1097
23 Ga0070681_10014150 3300005458 Bacteria 7940
24 Ga0070707_100239330 3300005468 Bacteria 1767
25 Ga0070698_100018917 3300005471 Bacteria 7245
26 Ga0070698_100019310 3300005471 Bacteria 7159
27 Ga0070679_100027260 3300005530 Bacteria 5621
28 Ga0070697_100037284 3300005536 Bacteria 3928
29 Ga0068853_100190341 3300005539 Bacteria 1864
30 Ga0070695_100013407 3300005545 Bacteria 4926
31 Ga0070696_100003421 3300005546 Bacteria 10578
32 Ga0070696_100041429 3300005546 Bacteria 3181
33 Ga0070696_100073243 3300005546 Unclassified 2413
34 Ga0070696_100176504 3300005546 Bacteria 1583
35 Ga0070693_100023406 3300005547 Bacteria 3301
36 Ga0070693_100040773 3300005547 Bacteria 2608
37 Ga0070665_100003205 3300005548 Bacteria 17603
38 Ga0070704_100043602 3300005549 Bacteria 3111
39 Ga0068857_100337276 3300005577 Unclassified 1394
40 Ga0068854_100227608 3300005578 Unclassified 1478
41 Ga0068852_100170746 3300005616 Bacteria 2038
42 Ga0068859_100017229 3300005617 Bacteria 7255
43 Ga0068859_100536962 3300005617 Unclassified 1264
44 Ga0068859_100747774 3300005617 Bacteria 1067
45 Ga0068859_100798175 3300005617 Bacteria 1032
46 Ga0068864_100229464 3300005618 Bacteria 1716
47 Ga0068864_100702118 3300005618 Unclassified 988
48 Ga0068861_100080925 3300005719 Bacteria 2542
49 Ga0068861_100105801 3300005719 Bacteria 2247
50 Ga0068863_100071142 3300005841 Bacteria 3291
51 Ga0068863_100148615 3300005841 Bacteria 2241
52 Ga0081455_10004029 3300005937 Bacteria 16660
53 Ga0081455_10274196 3300005937 Bacteria 1222
54 Ga0081539_10000669 3300005985 Bacteria 68738
55 Ga0075365_10275066 3300006038 Bacteria 1184
56 Ga0075369_10000547 3300006186 Bacteria 11851
57 Ga0075428_100480415 3300006844 Bacteria 1330
58 Ga0075430_100017865 3300006846 Bacteria 6037
59 Ga0075431_100234175 3300006847 Bacteria 1870
60 Ga0075431_100433176 3300006847 Bacteria 1313
61 Ga0075433_10003990 3300006852 Bacteria 11424
62 Ga0075433_10009865 3300006852 Bacteria 7654
63 Ga0075434_100002032 3300006871 Bacteria 17563
64 Ga0075434_100007793 3300006871 Bacteria 9917
65 Ga0075434_100026797 3300006871 Bacteria 5652
66 Ga0097620_100017229 3300006931 Bacteria 7255
67 Ga0097620_100038041 3300006931 Bacteria 4829
68 Ga0097620_100536892 3300006931 Unclassified 1264
69 Ga0097620_100747708 3300006931 Bacteria 1067
70 Ga0097620_100798194 3300006931 Bacteria 1032
71 Ga0075435_100097865 3300007076 Bacteria 2428
72 Ga0105240_10385325 3300009093 Unclassified 1582
73 Ga0111539_10103957 3300009094 Bacteria 3333
74 Ga0111539_10285346 3300009094 Bacteria 1921
75 Ga0111539_10559272 3300009094 Unclassified 1332
76 Ga0114129_10104623 3300009147 Bacteria 3912
77 Ga0114129_10293081 3300009147 Bacteria 2171
78 Ga0105243_10065068 3300009148 Unclassified 2928
79 Ga0105243_10325421 3300009148 Bacteria 1402
80 Ga0105242_10188058 3300009176 Bacteria 1826
81 Ga0105242_10278714 3300009176 Bacteria 1518
82 Ga0105237_10254598 3300009545 Bacteria 1758
83 Ga0105237_10292924 3300009545 Bacteria 1630
84 Ga0105249_10141146 3300009553 Bacteria 2310
85 Ga0105249_10346338 3300009553 Bacteria 1504
86 Ga0105239_10014464 3300010375 Bacteria 8757
87 Ga0105239_10514333 3300010375 Unclassified 1362
88 Ga0157373_10242901 3300013100 Bacteria 1273
89 Ga0157371_10117627 3300013102 Bacteria 1889
90 Ga0157370_10074182 3300013104 Bacteria 3209
91 Ga0157378_10090339 3300013297 Bacteria 2783
92 Ga0157378_10094276 3300013297 Bacteria 2726
93 Ga0157372_10827343 3300013307 Bacteria 1075
94 Ga0157372_11044075 3300013307 Unclassified 946
95 Ga0163163_10004086 3300014325 Bacteria 12446
96 Ga0163163_10040710 3300014325 Unclassified 4539
97 Ga0157380_10028450 3300014326 Bacteria 4261
98 Ga0213876_10000038 3300021384 Bacteria 182431
99 Ga0213876_10000382 3300021384 Bacteria 37485
100 Ga0209676_1001093 3300025292 Bacteria 30238
101 Ga0209050_1038082 3300025298 Bacteria 1377
102 Ga0207647_10022418 3300025904 Bacteria 4195
103 Ga0207705_10094364 3300025909 Bacteria 2194
104 Ga0207684_10046251 3300025910 Bacteria 3691
105 Ga0207707_10012656 3300025912 Bacteria 7332
106 Ga0207671_10201316 3300025914 Bacteria 1555
107 Ga0207671_10267105 3300025914 Bacteria 1347
108 Ga0207660_10041229 3300025917 Bacteria 3235
109 Ga0207657_10010757 3300025919 Bacteria 9108
110 Ga0207652_10011976 3300025921 Bacteria 6999
111 Ga0207646_10131743 3300025922 Bacteria 2250
112 Ga0207700_10001097 3300025928 Bacteria 15607
113 Ga0207644_10126738 3300025931 Bacteria 1949
114 Ga0207644_10627284 3300025931 Unclassified 894
115 Ga0207690_10128230 3300025932 Bacteria 1853
116 Ga0207686_10136840 3300025934 Bacteria 1688
117 Ga0207709_10199674 3300025935 Bacteria 1427
118 Ga0207689_10008881 3300025942 Bacteria 8719
119 Ga0207640_10241120 3300025981 Unclassified 1397
120 Ga0207658_10042847 3300025986 Bacteria 3286
121 Ga0207703_10055335 3300026035 Bacteria 3228
122 Ga0207639_10131731 3300026041 Bacteria 2071
123 Ga0207641_10152245 3300026088 Bacteria 2095
124 Ga0207641_10539895 3300026088 Bacteria 1136
125 Ga0207676_10267985 3300026095 Bacteria 1545
126 Ga0207674_10355064 3300026116 Unclassified 1417
127 Ga0207675_100027553 3300026118 Bacteria 5292
128 Ga0207675_100186008 3300026118 Bacteria 1991
129 Ga0207675_100467520 3300026118 Bacteria 1252
130 Ga0207698_10102649 3300026142 Bacteria 2375
131 Ga0207428_10095192 3300027907 Bacteria 2307
132 Ga0268266_10005192 3300028379 Bacteria 12261
133 Ga0265318_10018143 3300028577 Unclassified 2877
134 Ga0265338_10022915 3300028800 Bacteria 6443
135 Ga0265338_10103161 3300028800 Unclassified 2317
136 Ga0265330_10002411 3300031235 Bacteria 10204
137 Ga0265320_10065834 3300031240 Bacteria 1719
138 Ga0265325_10001075 3300031241 Bacteria 19676
139 Ga0265316_10043985 3300031344 Unclassified 3554
140 Ga0307408_100031905 3300031548 Unclassified 3671
141 Ga0265313_10024230 3300031595 Unclassified 3246
142 Ga0265314_10000027 3300031711 Bacteria 278331
143 Ga0265342_10000138 3300031712 Bacteria 81937
144 Ga0307405_10005108 3300031731 Bacteria 6285
145 Ga0307405_10039035 3300031731 Unclassified 2867
146 Ga0316577_10020326 3300031733 Unclassified 3681
147 Ga0307410_10054432 3300031852 Unclassified 2713
148 Ga0307416_100073010 3300032002 Bacteria 2859
149 Ga0307416_100079688 3300032002 Bacteria 2761
150 Ga0307416_100134036 3300032002 Bacteria 2237
151 Ga0307414_10041225 3300032004 Unclassified 3125
152 Ga0307414_10104756 3300032004 Bacteria 2137
153 Ga0307414_10119974 3300032004 Bacteria 2020
154 Ga0395899_0322537 3300037312 Unclassified 1040
155 Ga0395900_0034829 3300037418 Bacteria 5187
156 Ga0395900_0122725 3300037418 Bacteria 2665
157 Ga0395898_0300025 3300037466 Bacteria 1533
158 Ga0395905_0005871 3300037471 Bacteria 12461
159 Ga0395905_0297508 3300037471 Bacteria 1501
160 Ga0395901_0110561 3300038443 Bacteria 2885
161 Ga0436365_0038900 3300039437 Bacteria 45987
162 Ga0436365_0680065 3300039437 Bacteria 2548
163 Ga0436365_1023949 3300039437 Bacteria 126686
164 Ga0439455_0004468 3300042012 Bacteria 2771
165 Ga0439457_030783 3300042014 Bacteria 1190
166 Ga0439435_0007407 3300042436 Bacteria 2510
167 Ga0451577_0432678 3300042876 Unclassified 1195
168 Ga0453683_0133526 3300044673 Bacteria 1565
169 Ga0451576_0261659 3300045051 Bacteria 1808
170 Ga0495580_0307155 3300046472 Unclassified 1079
171 Ga0495630_0005829 3300046517 Bacteria 8704
172 Ga0495598_0014962 3300046537 Bacteria 1948
173 Ga0495621_0003871 3300046539 Unclassified 4156
174 Ga0495635_0115883 3300046663 Bacteria 1829
175 Ga0495581_0064347 3300047315 Bacteria 2119
176 Ga0495674_0007099 3300047319 Bacteria 10717
177 Ga0495676_0433958 3300047321 Unclassified 868
178 Ga0495677_0078666 3300047445 Unclassified 1234
179 Ga0495684_0018112 3300047471 Bacteria 5428
180 Ga0495602_0355120 3300048088 Bacteria 1057
181 Ga0496102_0007592 3300048905 Bacteria 9265
182 Ga0496104_0265448 3300048907 Bacteria 1629
183 Ga0496106_0007640 3300048909 Bacteria 7996
184 Ga0496112_0068362 3300048915 Bacteria 3508
185 Ga0496112_0087932 3300048915 Bacteria 3075
186 Ga0496113_0187791 3300048916 Unclassified 1640
187 Ga0501291_005004 3300049514 Bacteria 1713
188 Ga0501296_000733 3300049519 Unclassified 3254
189 Ga0501300_009913 3300049523 Unclassified 1388
190 Ga0501033_0061761 3300049570 Unclassified 2761
191 Ga0501034_0031836 3300049571 Bacteria 5357
192 Ga0501038_0074230 3300049574 Unclassified 2878
193 Ga0501046_0072783 3300049580 Unclassified 2668
194 Ga0501047_0015858 3300049581 Bacteria 7179
195 Ga0501070_0020193 3300049586 Bacteria 5589
196 Ga0501071_0431334 3300049587 Unclassified 1008
197 Ga0501076_0270029 3300049592 Bacteria 1393
198 Ga0501199_003995 3300049650 Unclassified 1439
199 Ga0501216_001561 3300049660 Bacteria 3118
200 Ga0501217_003963 3300049661 Unclassified 3022
201 Ga0501223_012898 3300049663 Unclassified 1668
202 Ga0501224_004972 3300049664 Bacteria 1895
203 Ga0501227_003210 3300049665 Unclassified 3550
204 Ga0501227_077741 3300049665 Unclassified 867
205 Ga0501230_022291 3300049667 Unclassified 1117
206 Ga0501235_002653 3300049669 Unclassified 3851
207 Ga0501247_010848 3300049677 Unclassified 1091
208 Ga0501249_002821 3300049679 Unclassified 3501
209 Ga0501257_003538 3300049686 Unclassified 3360
210 Ga0501225_0001145 3300049705 Bacteria 8287
211 Ga0501234_003418 3300049707 Bacteria 2495
212 Ga0501245_002460 3300049708 Bacteria 2475
213 Ga0501283_003294 3300049779 Unclassified 2130
214 Ga0501035_0021313 3300049822 Bacteria 5957
215 Ga0501044_0014047 3300049823 Bacteria 8647
216 Ga0501044_0075171 3300049823 Unclassified 3430
217 Ga0501212_001452 3300049851 Unclassified 2679
218 nmdc:mga0qj67_26457_c1 3300050509 Bacteria 4491
219 nmdc:mga06r32_407784_c1 3300050510 Bacteria 1341
220 nmdc:mga06r32_502905_c1 3300050510 Bacteria 1189
221 nmdc:mga08y16_13260_c1 3300050511 Bacteria 8666
222 nmdc:mga0n895_1969_c1 3300050512 Bacteria 15759
223 nmdc:mga0n895_201875_c1 3300050512 Bacteria 2019
224 nmdc:mga0n895_60586_c1 3300050512 Bacteria 3735
225 nmdc:mga0rr50_207785_c1 3300050513 Bacteria 1612
226 nmdc:mga0rr50_617642_c1 3300050513 Unclassified 924
227 nmdc:mga0a205_1894_c1 3300050515 Bacteria 13905
228 nmdc:mga0a205_19646_c1 3300050515 Bacteria 6373
229 nmdc:mga0a205_39132_c1 3300050515 Bacteria 4563
230 nmdc:mga0a205_92546_c1 3300050515 Bacteria 2921
231 nmdc:mga0sz30_9935_c1 3300050516 Bacteria 3634
232 Ga0500646_0032852 3300053090 Bacteria 1433
233 Ga0500616_0000467 3300053153 Bacteria 52601
234 Ga0501084_0143816 3300054114 Bacteria 2009

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039437 Ga0436365_0680065 Ga0436365_0680065_1849_2535 188
2 3300047321 Ga0495676_0433958 Ga0495676_0433958_139_852 194
3 3300005547 Ga0070693_100023406 Ga0070693_1000234062 200
4 3300050512 nmdc:mga0n895_60586_c1 nmdc:mga0n895_60586_c1_364_1170 200
5 3300050515 nmdc:mga0a205_19646_c1 nmdc:mga0a205_19646_c1_4455_5261 200
6 3300005546 Ga0070696_100176504 Ga0070696_1001765042 207
7 3300005547 Ga0070693_100040773 Ga0070693_1000407732 207
8 3300005578 Ga0068854_100227608 Ga0068854_1002276082 207
9 3300025981 Ga0207640_10241120 Ga0207640_102411202 207
10 3300042014 Ga0439457_030783 Ga0439457_030783_67_786 209
11 3300046663 Ga0495635_0115883 Ga0495635_0115883_170_931 215
12 3300005617 Ga0068859_100747774 Ga0068859_1007477741 216
13 3300006931 Ga0097620_100747708 Ga0097620_1007477081 216
14 3300009093 Ga0105240_10385325 Ga0105240_103853252 216
15 3300009545 Ga0105237_10254598 Ga0105237_102545982 217
16 3300049570 Ga0501033_0061761 Ga0501033_0061761_1247_2113 219
17 3300049571 Ga0501034_0031836 Ga0501034_0031836_4360_5226 219
18 3300049574 Ga0501038_0074230 Ga0501038_0074230_1213_2079 219
19 3300049580 Ga0501046_0072783 Ga0501046_0072783_827_1693 219
20 3300049581 Ga0501047_0015858 Ga0501047_0015858_4012_4878 219
21 3300049586 Ga0501070_0020193 Ga0501070_0020193_742_1608 219
22 3300049822 Ga0501035_0021313 Ga0501035_0021313_243_1109 219
23 3300049823 Ga0501044_0075171 Ga0501044_0075171_772_1638 219
24 3300010375 Ga0105239_10514333 Ga0105239_105143331 221
25 3300050509 nmdc:mga0qj67_26457_c1 nmdc:mga0qj67_26457_c1_1635_2468 222
26 3300050510 nmdc:mga06r32_502905_c1 nmdc:mga06r32_502905_c1_56_889 222
27 3300026041 Ga0207639_10131731 Ga0207639_101317312 227
28 3300005841 Ga0068863_100071142 Ga0068863_1000711422 228
29 3300006931 Ga0097620_100038041 Ga0097620_1000380414 228
30 3300025904 Ga0207647_10022418 Ga0207647_100224182 228
31 3300026035 Ga0207703_10055335 Ga0207703_100553352 228
32 3300048909 Ga0496106_0007640 Ga0496106_0007640_5034_5912 228
33 3300006847 Ga0075431_100433176 Ga0075431_1004331762 229
34 3300009094 Ga0111539_10285346 Ga0111539_102853462 229
35 3300027907 Ga0207428_10095192 Ga0207428_100951921 229
36 3300044673 Ga0453683_0133526 Ga0453683_0133526_235_1008 229
37 3300050510 nmdc:mga06r32_407784_c1 nmdc:mga06r32_407784_c1_95_949 229
38 3300050511 nmdc:mga08y16_13260_c1 nmdc:mga08y16_13260_c1_1774_2628 229
39 3300050512 nmdc:mga0n895_201875_c1 nmdc:mga0n895_201875_c1_304_1158 229
40 3300050515 nmdc:mga0a205_92546_c1 nmdc:mga0a205_92546_c1_142_996 229
41 3300053090 Ga0500646_0032852 Ga0500646_0032852_340_1107 229
42 3300009176 Ga0105242_10278714 Ga0105242_102787142 230
43 3300010375 Ga0105239_10014464 Ga0105239_100144643 230
44 3300013307 Ga0157372_10827343 Ga0157372_108273431 230
45 3300026142 Ga0207698_10102649 Ga0207698_101026492 230
46 3300046472 Ga0495580_0307155 Ga0495580_0307155_115_936 230
47 3300046517 Ga0495630_0005829 Ga0495630_0005829_5920_6741 230
48 3300047315 Ga0495581_0064347 Ga0495581_0064347_274_1095 230
49 3300047319 Ga0495674_0007099 Ga0495674_0007099_8714_9535 230
50 3300047471 Ga0495684_0018112 Ga0495684_0018112_1696_2517 230
51 3300048088 Ga0495602_0355120 Ga0495602_0355120_165_986 230
52 3300054114 Ga0501084_0143816 Ga0501084_0143816_874_1674 230
53 3300042012 Ga0439455_0004468 Ga0439455_0004468_335_1240 231
54 3300005436 Ga0070713_100001270 Ga0070713_10000127011 232
55 3300005436 Ga0070713_100327542 Ga0070713_1003275422 232
56 3300005616 Ga0068852_100170746 Ga0068852_1001707462 232
57 3300006871 Ga0075434_100007793 Ga0075434_1000077935 232
58 3300025928 Ga0207700_10001097 Ga0207700_1000109710 232
59 3300049587 Ga0501071_0431334 Ga0501071_0431334_66_947 232
60 3300009148 Ga0105243_10065068 Ga0105243_100650683 233
61 3300025935 Ga0207709_10199674 Ga0207709_101996741 233
62 3300005355 Ga0070671_100114456 Ga0070671_1001144562 234
63 3300005841 Ga0068863_100148615 Ga0068863_1001486152 234
64 3300014325 Ga0163163_10004086 Ga0163163_100040862 234
65 3300025931 Ga0207644_10126738 Ga0207644_101267382 234
66 3300025986 Ga0207658_10042847 Ga0207658_100428471 234
67 3300048905 Ga0496102_0007592 Ga0496102_0007592_4295_5077 234
68 3300005329 Ga0070683_100161361 Ga0070683_1001613613 236
69 3300005539 Ga0068853_100190341 Ga0068853_1001903413 236
70 3300005618 Ga0068864_100702118 Ga0068864_1007021182 236
71 3300025914 Ga0207671_10267105 Ga0207671_102671051 236
72 3300025931 Ga0207644_10627284 Ga0207644_106272841 237
73 3300006844 Ga0075428_100480415 Ga0075428_1004804152 239
74 3300006846 Ga0075430_100017865 Ga0075430_1000178654 239
75 3300009147 Ga0114129_10293081 Ga0114129_102930812 239
76 3300037466 Ga0395898_0300025 Ga0395898_0300025_620_1432 239
77 3300049823 Ga0501044_0014047 Ga0501044_0014047_968_1831 239
78 3300048907 Ga0496104_0265448 Ga0496104_0265448_492_1346 240
79 3300048915 Ga0496112_0087932 Ga0496112_0087932_2050_2904 240
80 3300005336 Ga0070680_100040751 Ga0070680_1000407515 241
81 3300049592 Ga0501076_0270029 Ga0501076_0270029_303_1136 242
82 3300007076 Ga0075435_100097865 Ga0075435_1000978652 243
83 3300009147 Ga0114129_10104623 Ga0114129_101046232 243
84 3300028800 Ga0265338_10103161 Ga0265338_101031612 243
85 3300031711 Ga0265314_10000027 Ga0265314_10000027150 243
86 3300050513 nmdc:mga0rr50_207785_c1 nmdc:mga0rr50_207785_c1_219_1097 243
87 iso_pu_bacteria 2522125168 2522548177 243
88 3300013297 Ga0157378_10094276 Ga0157378_100942763 244
89 3300028577 Ga0265318_10018143 Ga0265318_100181432 244
90 3300031235 Ga0265330_10002411 Ga0265330_100024112 244
91 3300031240 Ga0265320_10065834 Ga0265320_100658342 244
92 3300031241 Ga0265325_10001075 Ga0265325_1000107510 244
93 3300031344 Ga0265316_10043985 Ga0265316_100439852 244
94 3300031595 Ga0265313_10024230 Ga0265313_100242302 244
95 3300031712 Ga0265342_10000138 Ga0265342_1000013848 244
96 3300037471 Ga0395905_0297508 Ga0395905_0297508_88_915 244
97 3300003316 rootH1_10105105 rootH1_101051052 247
98 3300003781 Ga0055536_1007417 Ga0055536_10074172 247
99 3300005262 Ga0065165_1000385 Ga0065165_100038511 247
100 3300005289 Ga0065704_10189262 Ga0065704_101892622 247
101 3300005719 Ga0068861_100080925 Ga0068861_1000809252 247
102 3300013100 Ga0157373_10242901 Ga0157373_102429012 247
103 3300013102 Ga0157371_10117627 Ga0157371_101176272 247
104 3300013104 Ga0157370_10074182 Ga0157370_100741822 247
105 3300025292 Ga0209676_1001093 Ga0209676_100109321 247
106 3300025298 Ga0209050_1038082 Ga0209050_10380821 247
107 3300026118 Ga0207675_100027553 Ga0207675_1000275537 247
108 3300031731 Ga0307405_10005108 Ga0307405_100051083 247
109 3300032004 Ga0307414_10104756 Ga0307414_101047563 247
110 3300032004 Ga0307414_10119974 Ga0307414_101199742 247
111 3300049665 Ga0501227_077741 Ga0501227_077741_17_850 247
112 3300006852 Ga0075433_10009865 Ga0075433_100098653 248
113 3300006871 Ga0075434_100026797 Ga0075434_1000267973 248
114 3300009148 Ga0105243_10325421 Ga0105243_103254212 248
115 3300042436 Ga0439435_0007407 Ga0439435_0007407_179_1018 248
116 3300050513 nmdc:mga0rr50_617642_c1 nmdc:mga0rr50_617642_c1_28_867 248
117 3300050515 nmdc:mga0a205_39132_c1 nmdc:mga0a205_39132_c1_1758_2597 248
118 3300005336 Ga0070680_100133603 Ga0070680_1001336032 249
119 3300005458 Ga0070681_10014150 Ga0070681_100141505 249
120 3300005530 Ga0070679_100027260 Ga0070679_1000272602 249
121 3300005577 Ga0068857_100337276 Ga0068857_1003372762 249
122 3300009545 Ga0105237_10292924 Ga0105237_102929242 249
123 3300013307 Ga0157372_11044075 Ga0157372_110440751 249
124 3300025912 Ga0207707_10012656 Ga0207707_100126564 249
125 3300025914 Ga0207671_10201316 Ga0207671_102013162 249
126 3300025917 Ga0207660_10041229 Ga0207660_100412292 249
127 3300025921 Ga0207652_10011976 Ga0207652_100119762 249
128 3300026116 Ga0207674_10355064 Ga0207674_103550642 249
129 3300005471 Ga0070698_100019310 Ga0070698_1000193104 250
130 3300026118 Ga0207675_100467520 Ga0207675_1004675201 250
131 3300005339 Ga0070660_100001629 Ga0070660_10000162915 252
132 3300005548 Ga0070665_100003205 Ga0070665_10000320513 252
133 3300006847 Ga0075431_100234175 Ga0075431_1002341752 252
134 3300025919 Ga0207657_10010757 Ga0207657_100107574 252
135 3300026088 Ga0207641_10152245 Ga0207641_101522453 252
136 3300028379 Ga0268266_10005192 Ga0268266_1000519213 252
137 3300031733 Ga0316577_10020326 Ga0316577_100203263 252
138 3300053153 Ga0500616_0000467 Ga0500616_0000467_43447_44295 252
139 3300005444 Ga0070694_100383273 Ga0070694_1003832732 253
140 3300009553 Ga0105249_10346338 Ga0105249_103463382 253
141 3300037312 Ga0395899_0322537 Ga0395899_0322537_106_963 253
142 3300037418 Ga0395900_0034829 Ga0395900_0034829_2425_3282 253
143 3300038443 Ga0395901_0110561 Ga0395901_0110561_1364_2221 253
144 3300048915 Ga0496112_0068362 Ga0496112_0068362_569_1411 253
145 3300048916 Ga0496113_0187791 Ga0496113_0187791_707_1549 253
146 3300005937 Ga0081455_10004029 Ga0081455_1000402912 255
147 3300042876 Ga0451577_0432678 Ga0451577_0432678_191_1039 255
148 3300045051 Ga0451576_0261659 Ga0451576_0261659_422_1270 255
149 3300049519 Ga0501296_000733 Ga0501296_000733_2267_3112 255
150 3300005327 Ga0070658_10368719 Ga0070658_103687191 258
151 3300006038 Ga0075365_10275066 Ga0075365_102750662 259
152 3300006186 Ga0075369_10000547 Ga0075369_100005472 259
153 3300025932 Ga0207690_10128230 Ga0207690_101282302 259
154 3300050516 nmdc:mga0sz30_9935_c1 nmdc:mga0sz30_9935_c1_1141_2001 259
155 3300005289 Ga0065704_10076366 Ga0065704_100763664 261
156 3300005295 Ga0065707_10003076 Ga0065707_100030763 261
157 3300005367 Ga0070667_100000747 Ga0070667_1000007473 261
158 3300005536 Ga0070697_100037284 Ga0070697_1000372843 262
159 3300032002 Ga0307416_100079688 Ga0307416_1000796882 262
160 3300005337 Ga0070682_100308978 Ga0070682_1003089781 264
161 3300005719 Ga0068861_100105801 Ga0068861_1001058012 264
162 3300005937 Ga0081455_10274196 Ga0081455_102741961 264
163 3300026118 Ga0207675_100186008 Ga0207675_1001860082 264
164 3300009094 Ga0111539_10103957 Ga0111539_101039573 265
165 3300046539 Ga0495621_0003871 Ga0495621_0003871_1295_2209 265
166 3300047445 Ga0495677_0078666 Ga0495677_0078666_307_1221 265
167 3300005618 Ga0068864_100229464 Ga0068864_1002294642 268
168 3300006852 Ga0075433_10003990 Ga0075433_100039903 268
169 3300006871 Ga0075434_100002032 Ga0075434_1000020322 268
170 3300009094 Ga0111539_10559272 Ga0111539_105592721 268
171 3300021384 Ga0213876_10000038 Ga0213876_1000003847 268
172 3300026088 Ga0207641_10539895 Ga0207641_105398952 268
173 3300026095 Ga0207676_10267985 Ga0207676_102679852 268
174 3300031548 Ga0307408_100031905 Ga0307408_1000319052 268
175 3300031731 Ga0307405_10039035 Ga0307405_100390352 268
176 3300031852 Ga0307410_10054432 Ga0307410_100544323 268
177 3300032002 Ga0307416_100073010 Ga0307416_1000730102 268
178 3300032004 Ga0307414_10041225 Ga0307414_100412252 268
179 3300039437 Ga0436365_0038900 Ga0436365_0038900_381_1292 268
180 3300049514 Ga0501291_005004 Ga0501291_005004_357_1241 268
181 3300049523 Ga0501300_009913 Ga0501300_009913_434_1318 268
182 3300049650 Ga0501199_003995 Ga0501199_003995_276_1160 268
183 3300049660 Ga0501216_001561 Ga0501216_001561_971_1855 268
184 3300049661 Ga0501217_003963 Ga0501217_003963_106_990 268
185 3300049663 Ga0501223_012898 Ga0501223_012898_428_1312 268
186 3300049664 Ga0501224_004972 Ga0501224_004972_99_983 268
187 3300049665 Ga0501227_003210 Ga0501227_003210_2308_3192 268
188 3300049667 Ga0501230_022291 Ga0501230_022291_120_1004 268
189 3300049669 Ga0501235_002653 Ga0501235_002653_2632_3516 268
190 3300049677 Ga0501247_010848 Ga0501247_010848_56_940 268
191 3300049679 Ga0501249_002821 Ga0501249_002821_2226_3110 268
192 3300049686 Ga0501257_003538 Ga0501257_003538_503_1387 268
193 3300049705 Ga0501225_0001145 Ga0501225_0001145_2059_2943 268
194 3300049707 Ga0501234_003418 Ga0501234_003418_1265_2149 268
195 3300049708 Ga0501245_002460 Ga0501245_002460_724_1608 268
196 3300049779 Ga0501283_003294 Ga0501283_003294_1157_2041 268
197 3300049851 Ga0501212_001452 Ga0501212_001452_158_1042 268
198 3300050512 nmdc:mga0n895_1969_c1 nmdc:mga0n895_1969_c1_924_1808 268
199 3300050515 nmdc:mga0a205_1894_c1 nmdc:mga0a205_1894_c1_3880_4764 268
200 3300005617 Ga0068859_100536962 Ga0068859_1005369621 269
201 3300006931 Ga0097620_100536892 Ga0097620_1005368921 269
202 3300005327 Ga0070658_10103346 Ga0070658_101033462 270
203 3300025909 Ga0207705_10094364 Ga0207705_100943642 270
204 3300028800 Ga0265338_10022915 Ga0265338_100229153 271
205 3300005334 Ga0068869_100020591 Ga0068869_1000205913 273
206 3300005440 Ga0070705_100035010 Ga0070705_1000350102 273
207 3300005468 Ga0070707_100239330 Ga0070707_1002393302 273
208 3300005471 Ga0070698_100018917 Ga0070698_1000189173 273
209 3300005546 Ga0070696_100041429 Ga0070696_1000414292 273
210 3300005546 Ga0070696_100073243 Ga0070696_1000732433 273
211 3300005549 Ga0070704_100043602 Ga0070704_1000436022 273
212 3300005617 Ga0068859_100798175 Ga0068859_1007981752 273
213 3300006931 Ga0097620_100798194 Ga0097620_1007981942 273
214 3300009176 Ga0105242_10188058 Ga0105242_101880582 273
215 3300013297 Ga0157378_10090339 Ga0157378_100903392 273
216 3300014325 Ga0163163_10040710 Ga0163163_100407102 273
217 3300014326 Ga0157380_10028450 Ga0157380_100284504 273
218 3300025922 Ga0207646_10131743 Ga0207646_101317432 273
219 3300025934 Ga0207686_10136840 Ga0207686_101368401 273
220 3300025942 Ga0207689_10008881 Ga0207689_100088813 273
221 3300046537 Ga0495598_0014962 Ga0495598_0014962_58_972 273
222 3300005444 Ga0070694_100052894 Ga0070694_1000528942 274
223 3300005546 Ga0070696_100003421 Ga0070696_1000034214 274
224 3300005617 Ga0068859_100017229 Ga0068859_1000172293 274
225 3300006931 Ga0097620_100017229 Ga0097620_1000172293 274
226 3300009553 Ga0105249_10141146 Ga0105249_101411462 274
227 3300032002 Ga0307416_100134036 Ga0307416_1001340362 274
228 3300005545 Ga0070695_100013407 Ga0070695_1000134073 275
229 3300025910 Ga0207684_10046251 Ga0207684_100462514 275
230 3300037471 Ga0395905_0005871 Ga0395905_0005871_8513_9433 275
231 3300021384 Ga0213876_10000382 Ga0213876_1000038217 277
232 3300039437 Ga0436365_1023949 Ga0436365_1023949_13596_14513 277
233 3300037418 Ga0395900_0122725 Ga0395900_0122725_61_999 278
234 3300003203 JGI25406J46586_10019522 JGI25406J46586_100195223 280
235 3300005985 Ga0081539_10000669 Ga0081539_1000066934 280

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01061

ABC2_membrane

ABC-2 type transporter

61

269

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7r8d-assembly1.cif.gz_B the structure of human abcg1 e242q with cholesterol 0.6291 163 271
6j7a-assembly2.cif.gz_B fusion protein of heme oxygenase-1 and nadph cytochrome p450 reductase (17aa) 0.6114 235 275
8bi0-assembly1.cif.gz_A abcg2 turnover-2 state with tariquidar bound 0.6036 156 267
1xk1-assembly2.cif.gz_B crystal structures of the g139a, g139a-no and g143h mutants of human heme oxygenase-1 0.6028 236 277
1oze-assembly2.cif.gz_B crystal structures of the ferric, ferrous, and ferrous-no forms of the asp140ala mutant of human heme oxygenase-1:catalytic implications 0.5973 236 276
ID Description Score Start End Superfamily
1t5pA00 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.5948 236 276 1.20.910.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5888 114 268 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5589 114 267 3.40.1710.10
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5201 116 264 3.40.1710.10
af_K7LU78_450_565_1.20.58.390 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.4409 165 280 1.20.58.390
ID Description Score Start End GO Terms
AF-A0A257UZB8-F1-model_v4 Phosphate ABC transporter permease 0.9441 157 280 GO:0015920
GO:0016020
GO:0140359
AF-A0A1V5T0A9-F1-model_v4 deleted 0.9336 158 280
AF-A0A7J9WF41-F1-model_v4 ABC-2 type transporter transmembrane domain-containing protein 0.9317 156 280 GO:0015920
GO:0016020
GO:0140359
AF-A0A7Y2D4D6-F1-model_v4 ABC transporter permease 0.931 156 280 GO:0005886
GO:0015920
GO:0140359
AF-A0A1V1NUL8-F1-model_v4 ABC-2 type transporter transmembrane domain-containing protein 0.928 148 280 GO:0015920
GO:0016020
GO:0140359

Feature Viewer

pLDDT pTM Quality
75.5 0.6 Medium
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Predicted Structure (AlphaFold2)

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