F347919

General Info

Members Datasets Scaffolds Average Seq Length
235 174 470 181

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100225129|Ga0070699_1002251292
Length 203
Sequence MRTASISSPCFATACSSTRGANVKAIPTAIPEVLMIEARVFEDGRGFFFESWNRRAFAELVGRDVDFVQDNHSASARNVLRGLHYQVQNVQGKLVRVTSGEVFDVAVDLRRSSPTFGRWVGERLSRENRRMMWVPPGFAHGFLVLSDAAEFLYKTTDYYAPEHERTLLWNDPALAIRWPLQGEPLLKPKDAAGLRLAQAQTFP

Samples

Sample ID Description Type Environment
1 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
96 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
97 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
98 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
99 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
100 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
101 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
102 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
107 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
108 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
112 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
115 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
116 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
117 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
118 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
119 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
122 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
128 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
129 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
130 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
133 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
134 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
138 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
139 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
140 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
141 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
142 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
143 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
144 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
147 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
152 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
153 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
154 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
166 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
167 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
168 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
169 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
170 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
174 2808606445 Pseudomonas sp. SJZ131 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.57
Metatranscriptomes 0
Isolates 0.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.43
Nodule 0
Rhizoplane 0
Rhizosphere 97.87
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100225129 3300005518 Bacteria 1672
2 Ga0070658_10064658 3300005327 Bacteria 2984
3 Ga0070658_10608960 3300005327 Bacteria 947
4 Ga0070690_100236046 3300005330 Bacteria 1288
5 Ga0070690_100668517 3300005330 Bacteria 795
6 Ga0070670_100061075 3300005331 Bacteria 3236
7 Ga0070670_101092139 3300005331 Bacteria 727
8 Ga0070666_11099439 3300005335 Bacteria 591
9 Ga0070680_100084269 3300005336 Bacteria 2625
10 Ga0070689_100223919 3300005340 Bacteria 1544
11 Ga0070661_100154534 3300005344 Bacteria 1736
12 Ga0070661_100467272 3300005344 Bacteria 1006
13 Ga0070692_10209491 3300005345 Bacteria 1146
14 Ga0070669_100094355 3300005353 Bacteria 2248
15 Ga0070675_100089424 3300005354 Bacteria 2578
16 Ga0070659_100258667 3300005366 Bacteria 1444
17 Ga0070714_100552473 3300005435 Bacteria 1102
18 Ga0070714_100719652 3300005435 Bacteria 964
19 Ga0070713_100046986 3300005436 Bacteria 3546
20 Ga0070701_10183260 3300005438 Bacteria 1227
21 Ga0070708_100391706 3300005445 Bacteria 1310
22 Ga0070662_100603729 3300005457 Bacteria 923
23 Ga0070679_100085524 3300005530 Bacteria 3141
24 Ga0070679_100750655 3300005530 Bacteria 918
25 Ga0070684_100716416 3300005535 Bacteria 933
26 Ga0068853_100016695 3300005539 Bacteria 6046
27 Ga0068853_100488081 3300005539 Bacteria 1162
28 Ga0070672_100324150 3300005543 Bacteria 1310
29 Ga0070686_100074065 3300005544 Bacteria 2237
30 Ga0070686_100416697 3300005544 Bacteria 1025
31 Ga0070693_100003685 3300005547 Bacteria 7166
32 Ga0068855_100004142 3300005563 Bacteria 17693
33 Ga0068855_100014386 3300005563 Bacteria 9526
34 Ga0068855_100019510 3300005563 Bacteria 8147
35 Ga0068855_100458416 3300005563 Bacteria 1390
36 Ga0070664_101445793 3300005564 Bacteria 650
37 Ga0068857_101330141 3300005577 Bacteria 698
38 Ga0068856_100314828 3300005614 Bacteria 1582
39 Ga0068856_100419592 3300005614 Bacteria 1358
40 Ga0068852_100009106 3300005616 Bacteria 7349
41 Ga0068852_100037377 3300005616 Bacteria 4070
42 Ga0068852_100588978 3300005616 Bacteria 1116
43 Ga0068859_100127086 3300005617 Bacteria 2619
44 Ga0068859_100269511 3300005617 Bacteria 1794
45 Ga0068864_100481063 3300005618 Bacteria 1192
46 Ga0068861_100063731 3300005719 Bacteria 2834
47 Ga0068861_100380704 3300005719 Bacteria 1247
48 Ga0068858_100009188 3300005842 Bacteria 9446
49 Ga0068858_100177727 3300005842 Bacteria 2009
50 Ga0068858_100712251 3300005842 Bacteria 977
51 Ga0068860_100383018 3300005843 Bacteria 1389
52 Ga0081455_10075289 3300005937 Bacteria 2785
53 Ga0070715_10199784 3300006163 Bacteria 1015
54 Ga0070712_100373065 3300006175 Bacteria 1173
55 Ga0075366_10036358 3300006195 Bacteria 2903
56 Ga0097621_100008117 3300006237 Bacteria 7546
57 Ga0097621_100054778 3300006237 Bacteria 3255
58 Ga0097621_100388158 3300006237 Bacteria 1248
59 Ga0068871_100094075 3300006358 Bacteria 2501
60 Ga0075428_100068842 3300006844 Bacteria 3871
61 Ga0075433_10152016 3300006852 Bacteria 2059
62 Ga0068865_100035437 3300006881 Bacteria 3356
63 Ga0075436_100006486 3300006914 Bacteria 8015
64 Ga0097620_100127092 3300006931 Bacteria 2619
65 Ga0097620_100269520 3300006931 Bacteria 1794
66 Ga0075435_100189727 3300007076 Bacteria 1739
67 Ga0075435_100415827 3300007076 Bacteria 1158
68 Ga0105240_10092376 3300009093 Bacteria 3695
69 Ga0105240_10157593 3300009093 Bacteria 2699
70 Ga0111539_10082622 3300009094 Bacteria 3778
71 Ga0111539_10363407 3300009094 Bacteria 1685
72 Ga0105242_10005169 3300009176 Bacteria 10071
73 Ga0105242_10369642 3300009176 Bacteria 1330
74 Ga0105248_10025040 3300009177 Bacteria 6634
75 Ga0105248_10301469 3300009177 Bacteria 1804
76 Ga0105238_10021447 3300009551 Bacteria 6579
77 Ga0157371_10237317 3300013102 Bacteria 1311
78 Ga0157371_10808500 3300013102 Bacteria 707
79 Ga0157370_10007162 3300013104 Bacteria 12166
80 Ga0157370_10073273 3300013104 Bacteria 3231
81 Ga0157370_10315618 3300013104 Bacteria 1442
82 Ga0157370_10463341 3300013104 Bacteria 1165
83 Ga0157369_10001463 3300013105 Bacteria 28936
84 Ga0157374_10438255 3300013296 Bacteria 1307
85 Ga0157378_10042912 3300013297 Bacteria 4015
86 Ga0163162_10235539 3300013306 Bacteria 1961
87 Ga0157372_10035022 3300013307 Bacteria 5524
88 Ga0157372_10065726 3300013307 Bacteria 4073
89 Ga0157372_10357105 3300013307 Bacteria 1703
90 Ga0157372_10455247 3300013307 Bacteria 1491
91 Ga0157375_10014433 3300013308 Bacteria 7048
92 Ga0157375_10200616 3300013308 Bacteria 2151
93 Ga0157380_12349343 3300014326 Bacteria 598
94 Ga0157377_10987448 3300014745 Bacteria 636
95 Ga0157379_10086834 3300014968 Bacteria 2805
96 Ga0157379_11068825 3300014968 Bacteria 772
97 Ga0157376_10120292 3300014969 Bacteria 2326
98 Ga0213876_10264765 3300021384 Bacteria 914
99 Ga0207685_10126369 3300025905 Bacteria 1129
100 Ga0207705_10103125 3300025909 Bacteria 2101
101 Ga0207705_10514893 3300025909 Bacteria 930
102 Ga0207707_10020035 3300025912 Bacteria 5836
103 Ga0207707_10084192 3300025912 Bacteria 2777
104 Ga0207695_10165993 3300025913 Bacteria 2136
105 Ga0207663_10166996 3300025916 Bacteria 1559
106 Ga0207660_10064606 3300025917 Bacteria 2642
107 Ga0207660_10579449 3300025917 Bacteria 913
108 Ga0207657_11152627 3300025919 Bacteria 591
109 Ga0207652_10174252 3300025921 Bacteria 1931
110 Ga0207652_10182501 3300025921 Bacteria 1886
111 Ga0207652_10852435 3300025921 Bacteria 807
112 Ga0207681_10181844 3300025923 Bacteria 1602
113 Ga0207694_10039107 3300025924 Bacteria 3649
114 Ga0207659_10021023 3300025926 Bacteria 4325
115 Ga0207687_10033909 3300025927 Bacteria 3465
116 Ga0207700_10266799 3300025928 Bacteria 1468
117 Ga0207664_10393782 3300025929 Bacteria 1231
118 Ga0207664_10550125 3300025929 Bacteria 1035
119 Ga0207686_10100619 3300025934 Bacteria 1929
120 Ga0207709_10690352 3300025935 Bacteria 816
121 Ga0207704_10017041 3300025938 Bacteria 3754
122 Ga0207711_10070779 3300025941 Bacteria 3025
123 Ga0207711_10480008 3300025941 Bacteria 1158
124 Ga0207667_10007416 3300025949 Bacteria 13185
125 Ga0207667_10016708 3300025949 Bacteria 8280
126 Ga0207667_10203498 3300025949 Bacteria 2030
127 Ga0207667_10220615 3300025949 Bacteria 1942
128 Ga0207651_10591551 3300025960 Bacteria 969
129 Ga0207677_10529187 3300026023 Bacteria 1024
130 Ga0207639_10055390 3300026041 Bacteria 3035
131 Ga0207702_10254306 3300026078 Bacteria 1651
132 Ga0207702_10340507 3300026078 Bacteria 1433
133 Ga0207641_10067134 3300026088 Bacteria 3072
134 Ga0207641_10519977 3300026088 Bacteria 1158
135 Ga0207648_10320832 3300026089 Bacteria 1392
136 Ga0207674_10358058 3300026116 Bacteria 1411
137 Ga0207675_100056153 3300026118 Bacteria 3673
138 Ga0207675_100419330 3300026118 Bacteria 1322
139 Ga0207698_10566563 3300026142 Bacteria 1116
140 Ga0207698_11148139 3300026142 Bacteria 790
141 Ga0209967_1007970 3300027364 Bacteria 1453
142 Ga0207428_10047142 3300027907 Bacteria 3461
143 Ga0268266_10000556 3300028379 Bacteria 52036
144 Ga0265326_10006173 3300028558 Bacteria 3741
145 Ga0265319_1001218 3300028563 Bacteria 15888
146 Ga0265318_10072044 3300028577 Bacteria 1280
147 Ga0265336_10012101 3300028666 Bacteria 2910
148 Ga0265338_10001640 3300028800 Bacteria 35799
149 Ga0265338_10080587 3300028800 Bacteria 2734
150 Ga0265332_10026580 3300031238 Bacteria 2539
151 Ga0265331_10011211 3300031250 Bacteria 4917
152 Ga0265316_10006038 3300031344 Bacteria 11637
153 Ga0307408_100441200 3300031548 Bacteria 1127
154 Ga0307408_100869336 3300031548 Bacteria 823
155 Ga0316579_10343584 3300031691 Bacteria 722
156 Ga0265314_10001627 3300031711 Bacteria 24594
157 Ga0265342_10023372 3300031712 Bacteria 3914
158 Ga0316576_10007262 3300031727 Bacteria 6956
159 Ga0307410_10237459 3300031852 Bacteria 1411
160 Ga0307412_10093965 3300031911 Bacteria 2105
161 Ga0307416_100574065 3300032002 Bacteria 1204
162 Ga0307416_100612258 3300032002 Bacteria 1170
163 Ga0316585_10105943 3300032137 Bacteria 924
164 Ga0373939_0064605 3300035114 Bacteria 1175
165 Ga0373956_0225615 3300035119 Bacteria 890
166 Ga0373943_0342313 3300035170 Bacteria 856
167 Ga0373955_0017156 3300035172 Bacteria 3578
168 Ga0373924_0038035 3300035410 Bacteria 1961
169 Ga0316582_0035428 3300036647 Bacteria 3082
170 Ga0316584_0145256 3300036712 Bacteria 1767
171 Ga0373925_0002126 3300037068 Bacteria 16208
172 Ga0373925_0718280 3300037068 Bacteria 824
173 Ga0436365_1273106 3300039437 Bacteria 3250
174 Ga0436365_1595577 3300039437 Bacteria 2919
175 Ga0439441_082330 3300042001 Bacteria 702
176 Ga0466963_0318771 3300044694 Bacteria 1094
177 Ga0453684_0000986 3300044712 Bacteria 92924
178 Ga0466970_0225902 3300044765 Bacteria 1045
179 Ga0466959_0603246 3300045049 Bacteria 738
180 Ga0451576_0000015 3300045051 Bacteria 579908
181 Ga0451576_0404145 3300045051 Bacteria 1432
182 Ga0495592_0106088 3300046454 Bacteria 1995
183 Ga0495582_0081272 3300046473 Bacteria 1799
184 Ga0495664_0150538 3300046477 Bacteria 1411
185 Ga0495664_0188596 3300046477 Bacteria 1250
186 Ga0495608_0066629 3300046511 Bacteria 2357
187 Ga0495628_0233518 3300046516 Bacteria 1378
188 Ga0495630_0075352 3300046517 Bacteria 2542
189 Ga0495666_0075458 3300046526 Bacteria 1598
190 Ga0495587_0002467 3300046536 Bacteria 12346
191 Ga0495645_0021721 3300046543 Bacteria 4639
192 Ga0495634_0053040 3300046642 Bacteria 2717
193 Ga0495599_0011973 3300046678 Bacteria 5336
194 Ga0495623_0038957 3300046679 Bacteria 3039
195 Ga0495646_0023541 3300046680 Bacteria 3876
196 Ga0495613_0006354 3300046689 Bacteria 8838
197 Ga0495589_0072254 3300046794 Bacteria 1685
198 Ga0495676_0245236 3300047321 Bacteria 1225
199 Ga0495675_0013275 3300047444 Bacteria 5198
200 Ga0495684_0072746 3300047471 Bacteria 2612
201 Ga0495602_0465835 3300048088 Bacteria 889
202 Ga0496125_0075747 3300048928 Bacteria 2602
203 Ga0495678_005597 3300049459 Bacteria 6880
204 Ga0501039_0380806 3300049575 Bacteria 1108
205 Ga0501041_0175472 3300049577 Bacteria 1341
206 Ga0501047_0002735 3300049581 Bacteria 16799
207 Ga0501047_0059244 3300049581 Bacteria 3697
208 Ga0501067_0097573 3300049583 Bacteria 1632
209 Ga0501069_0002691 3300049585 Bacteria 9072
210 Ga0501070_0002025 3300049586 Bacteria 17809
211 Ga0501072_0136353 3300049588 Bacteria 1957
212 Ga0501072_0154378 3300049588 Bacteria 1830
213 Ga0501073_0008439 3300049589 Bacteria 7640
214 Ga0501074_0001643 3300049590 Bacteria 15154
215 Ga0501239_031432 3300049672 Unclassified 699
216 Ga0501079_0018818 3300049741 Bacteria 5278
217 Ga0501080_0032013 3300049742 Bacteria 4902
218 Ga0501080_0055028 3300049742 Bacteria 3706
219 Ga0501083_0001292 3300049744 Bacteria 16931
220 Ga0501035_0046075 3300049822 Bacteria 3922
221 Ga0501045_0339336 3300049824 Bacteria 1118
222 nmdc:mga08y16_394388_c1 3300050511 Bacteria 1417
223 nmdc:mga08y16_87871_c1 3300050511 Bacteria 3239
224 nmdc:mga0n895_42705_c1 3300050512 Bacteria 4412
225 nmdc:mga0rr50_113205_c1 3300050513 Bacteria 2150
226 nmdc:mga08x19_1250_c1 3300050514 Bacteria 15761
227 nmdc:mga0a205_626516_c1 3300050515 Bacteria 928
228 Ga0495601_0109837 3300053077 Bacteria 1785
229 Ga0495595_0087335 3300053084 Bacteria 1493
230 Ga0495619_0187464 3300053085 Bacteria 1432
231 Ga0501084_0068390 3300054114 Bacteria 2973
232 Ga0501082_0156912 3300060353 Bacteria 1977
233 Ga0501082_0663831 3300060353 Bacteria 912
234 Ga0530510_0171454 3300061734 Bacteria 1607
235 2809217823 2808606445 Bacteria 6057339
236 Ga0070699_100225129
237 Ga0070658_10064658
238 Ga0070658_10608960
239 Ga0070690_100236046
240 Ga0070690_100668517
241 Ga0070670_100061075
242 Ga0070670_101092139
243 Ga0070666_11099439
244 Ga0070680_100084269
245 Ga0070689_100223919
246 Ga0070661_100154534
247 Ga0070661_100467272
248 Ga0070692_10209491
249 Ga0070669_100094355
250 Ga0070675_100089424
251 Ga0070659_100258667
252 Ga0070714_100552473
253 Ga0070714_100719652
254 Ga0070713_100046986
255 Ga0070701_10183260
256 Ga0070708_100391706
257 Ga0070662_100603729
258 Ga0070679_100085524
259 Ga0070679_100750655
260 Ga0070684_100716416
261 Ga0068853_100016695
262 Ga0068853_100488081
263 Ga0070672_100324150
264 Ga0070686_100074065
265 Ga0070686_100416697
266 Ga0070693_100003685
267 Ga0068855_100004142
268 Ga0068855_100014386
269 Ga0068855_100019510
270 Ga0068855_100458416
271 Ga0070664_101445793
272 Ga0068857_101330141
273 Ga0068856_100314828
274 Ga0068856_100419592
275 Ga0068852_100009106
276 Ga0068852_100037377
277 Ga0068852_100588978
278 Ga0068859_100127086
279 Ga0068859_100269511
280 Ga0068864_100481063
281 Ga0068861_100063731
282 Ga0068861_100380704
283 Ga0068858_100009188
284 Ga0068858_100177727
285 Ga0068858_100712251
286 Ga0068860_100383018
287 Ga0081455_10075289
288 Ga0070715_10199784
289 Ga0070712_100373065
290 Ga0075366_10036358
291 Ga0097621_100008117
292 Ga0097621_100054778
293 Ga0097621_100388158
294 Ga0068871_100094075
295 Ga0075428_100068842
296 Ga0075433_10152016
297 Ga0068865_100035437
298 Ga0075436_100006486
299 Ga0097620_100127092
300 Ga0097620_100269520
301 Ga0075435_100189727
302 Ga0075435_100415827
303 Ga0105240_10092376
304 Ga0105240_10157593
305 Ga0111539_10082622
306 Ga0111539_10363407
307 Ga0105242_10005169
308 Ga0105242_10369642
309 Ga0105248_10025040
310 Ga0105248_10301469
311 Ga0105238_10021447
312 Ga0157371_10237317
313 Ga0157371_10808500
314 Ga0157370_10007162
315 Ga0157370_10073273
316 Ga0157370_10315618
317 Ga0157370_10463341
318 Ga0157369_10001463
319 Ga0157374_10438255
320 Ga0157378_10042912
321 Ga0163162_10235539
322 Ga0157372_10035022
323 Ga0157372_10065726
324 Ga0157372_10357105
325 Ga0157372_10455247
326 Ga0157375_10014433
327 Ga0157375_10200616
328 Ga0157380_12349343
329 Ga0157377_10987448
330 Ga0157379_10086834
331 Ga0157379_11068825
332 Ga0157376_10120292
333 Ga0213876_10264765
334 Ga0207685_10126369
335 Ga0207705_10103125
336 Ga0207705_10514893
337 Ga0207707_10020035
338 Ga0207707_10084192
339 Ga0207695_10165993
340 Ga0207663_10166996
341 Ga0207660_10064606
342 Ga0207660_10579449
343 Ga0207657_11152627
344 Ga0207652_10174252
345 Ga0207652_10182501
346 Ga0207652_10852435
347 Ga0207681_10181844
348 Ga0207694_10039107
349 Ga0207659_10021023
350 Ga0207687_10033909
351 Ga0207700_10266799
352 Ga0207664_10393782
353 Ga0207664_10550125
354 Ga0207686_10100619
355 Ga0207709_10690352
356 Ga0207704_10017041
357 Ga0207711_10070779
358 Ga0207711_10480008
359 Ga0207667_10007416
360 Ga0207667_10016708
361 Ga0207667_10203498
362 Ga0207667_10220615
363 Ga0207651_10591551
364 Ga0207677_10529187
365 Ga0207639_10055390
366 Ga0207702_10254306
367 Ga0207702_10340507
368 Ga0207641_10067134
369 Ga0207641_10519977
370 Ga0207648_10320832
371 Ga0207674_10358058
372 Ga0207675_100056153
373 Ga0207675_100419330
374 Ga0207698_10566563
375 Ga0207698_11148139
376 Ga0209967_1007970
377 Ga0207428_10047142
378 Ga0268266_10000556
379 Ga0265326_10006173
380 Ga0265319_1001218
381 Ga0265318_10072044
382 Ga0265336_10012101
383 Ga0265338_10001640
384 Ga0265338_10080587
385 Ga0265332_10026580
386 Ga0265331_10011211
387 Ga0265316_10006038
388 Ga0307408_100441200
389 Ga0307408_100869336
390 Ga0316579_10343584
391 Ga0265314_10001627
392 Ga0265342_10023372
393 Ga0316576_10007262
394 Ga0307410_10237459
395 Ga0307412_10093965
396 Ga0307416_100574065
397 Ga0307416_100612258
398 Ga0316585_10105943
399 Ga0373939_0064605
400 Ga0373956_0225615
401 Ga0373943_0342313
402 Ga0373955_0017156
403 Ga0373924_0038035
404 Ga0316582_0035428
405 Ga0316584_0145256
406 Ga0373925_0002126
407 Ga0373925_0718280
408 Ga0436365_1273106
409 Ga0436365_1595577
410 Ga0439441_082330
411 Ga0466963_0318771
412 Ga0453684_0000986
413 Ga0466970_0225902
414 Ga0466959_0603246
415 Ga0451576_0000015
416 Ga0451576_0404145
417 Ga0495592_0106088
418 Ga0495582_0081272
419 Ga0495664_0150538
420 Ga0495664_0188596
421 Ga0495608_0066629
422 Ga0495628_0233518
423 Ga0495630_0075352
424 Ga0495666_0075458
425 Ga0495587_0002467
426 Ga0495645_0021721
427 Ga0495634_0053040
428 Ga0495599_0011973
429 Ga0495623_0038957
430 Ga0495646_0023541
431 Ga0495613_0006354
432 Ga0495589_0072254
433 Ga0495676_0245236
434 Ga0495675_0013275
435 Ga0495684_0072746
436 Ga0495602_0465835
437 Ga0496125_0075747
438 Ga0495678_005597
439 Ga0501039_0380806
440 Ga0501041_0175472
441 Ga0501047_0002735
442 Ga0501047_0059244
443 Ga0501067_0097573
444 Ga0501069_0002691
445 Ga0501070_0002025
446 Ga0501072_0136353
447 Ga0501072_0154378
448 Ga0501073_0008439
449 Ga0501074_0001643
450 Ga0501239_031432
451 Ga0501079_0018818
452 Ga0501080_0032013
453 Ga0501080_0055028
454 Ga0501083_0001292
455 Ga0501035_0046075
456 Ga0501045_0339336
457 nmdc:mga08y16_394388_c1
458 nmdc:mga08y16_87871_c1
459 nmdc:mga0n895_42705_c1
460 nmdc:mga0rr50_113205_c1
461 nmdc:mga08x19_1250_c1
462 nmdc:mga0a205_626516_c1
463 Ga0495601_0109837
464 Ga0495595_0087335
465 Ga0495619_0187464
466 Ga0501084_0068390
467 Ga0501082_0156912
468 Ga0501082_0663831
469 Ga0530510_0171454
470 2809217823

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00908

dTDP_sugar_isom

dTDP-4-dehydrorhamnose 3,5-epimerase

27

198

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ixk-assembly1.cif.gz_B rmlc p aeruginosa with dtdp-4-keto rhamnnose (the product of the reaction) 0.99 2 181
2ixh-assembly1.cif.gz_A rmlc p aeruginosa with dtdp-rhamnose 0.9866 1 181
6din-assembly1.cif.gz_A-2 high resolutionstructure of apo dtdp-4-dehydrorhamnose 3,5-epimerase 0.9863 1 181
1dzt-assembly1.cif.gz_B rmlc from salmonella typhimurium 0.9816 2 177
2ixh-assembly1.cif.gz_A rmlc p aeruginosa with dtdp-rhamnose 0.9812 1 181
ID Description Score Start End Superfamily
6dinA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9863 2 181 2.60.120.10
6dinA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9702 2 181 2.60.120.10
2ixcB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9629 1 175 2.60.120.10
1epzA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9627 2 180 2.60.120.10
2c0zA01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9568 1 176 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A0F8Z5C9-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase 0.9985 38 181 GO:0005829
GO:0008830
GO:0019305
GO:0045226
AF-A0A2I8EKZ7-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) 0.9978 2 181 GO:0005829
GO:0008830
GO:0019305
GO:0045226
AF-A0A7C8XNS0-F1-model_v4 deleted 0.9978 43 167
AF-A0A5C7VRA9-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) 0.9971 1 150 GO:0005829
GO:0008830
GO:0019305
GO:0045226
AF-A0A1F0F8S9-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) 0.9968 28 181 GO:0005829
GO:0008830
GO:0019305
GO:0045226

Map