F347638
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 234 | 179 | 468 | 464 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2996221748|2996227949 |
| Length | 542 |
| Sequence | SEPRGERSSDEGRRGPSSAGGRWSGGERGGRGDGPRSGEGHRGGGDRGRFTGGERAERYPRGERAGPRGDGPRGGRFDADRRGGARRPARPAVDLPRQVAYQAIAAVHRDDAYANLVLPAMLREEGLVGRDAAFATELTYGTLRQTGTLDAIISDAADRDVQRIDPPVRDALRLGAYQLLHTRVPAHAAVSSTVDLVRSVGPGATGFANAVLREITTRDHDAWVAKLAPATETDPVGHLALAYSHPQWIVRAFAEALGGDLGETERLLIEDNERPPVHLCARPGLADPVELADEVGGAPGAFSPYAVYLSGGAPGDLRAVIEGRAHVQDEGSQLVANALAVAPLDGPDGRWLDLCAGPGGKAGLLGALAAQRGARLTAVEVAEHRARLVEQATRGLPVTVLATDGRTVGGDPELPEGHFDRVLVDAPCTGLGSLRRRPESRWRRQPSDLPPLTRLQRELLTAALRAVRPGGLVAYVTCSPHTVETHVTVTEAARRCGLPVDFVDARPLLPAGMPGLGDGPTVQLWPHRHGTDAMFLAVLRRG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 3 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 14 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 16 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 17 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 19 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 20 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 21 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 22 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 23 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 24 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 25 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 27 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 28 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 29 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 30 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 42 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 65 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 66 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 67 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 68 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 69 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 70 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 71 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 72 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 73 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 74 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 75 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 76 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 77 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 78 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 79 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 80 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 81 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 82 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 83 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 84 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 85 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 86 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 87 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 88 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 89 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 90 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 91 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 92 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 93 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 94 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 95 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 96 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 97 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 98 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 106 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 107 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 109 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 110 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 111 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 112 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 113 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 114 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 115 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 116 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 117 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 125 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 126 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 127 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 128 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 129 | 2501939600 | Micromonospora sp. L5 | Isolate | Unclassified |
| 130 | 2515154088 | Salinispora arenicola CNT800 | Isolate | Rhizosphere |
| 131 | 2515154129 | Salinispora pacifica CNS103 | Isolate | Rhizosphere |
| 132 | 2515154137 | Salinispora arenicola CNX482 | Isolate | Rhizosphere |
| 133 | 2515154202 | Salinispora pacifica CNT084 | Isolate | Rhizosphere |
| 134 | 2515154203 | Salinispora arenicola CNR921 | Isolate | Rhizosphere |
| 135 | 2622736626 | Micromonospora rhizosphaerae DSM 45431 | Isolate | Rhizosphere |
| 136 | 2675903059 | Asanoa hainanensis CGMCC 4.5593 | Isolate | Rhizosphere |
| 137 | 2684623035 | Frankia sp. NRRL B-16219 | Isolate | Rhizosphere |
| 138 | 2738541264 | Mycobacterium sp. OK889 | Isolate | Unclassified |
| 139 | 2738541356 | Mycobacterium sp. OK887 | Isolate | Unclassified |
| 140 | 2772190715 | Micromonospora chokoriensis NRRL B-24750 | Isolate | Unclassified |
| 141 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 142 | 2831935698 | Jishengella sp. AZ1-13 | Isolate | Unclassified |
| 143 | 2832004796 | Micromonospora endophytica JCM 18317 | Isolate | Unclassified |
| 144 | 2852643534 | Leifsonia sp. AK011 | Isolate | Rhizosphere |
| 145 | 2855670206 | Micromonospora noduli Lupac 07 | Isolate | Nodule |
| 146 | 2855676851 | Micromonospora saelicesensis GAR05 | Isolate | Unclassified |
| 147 | 2855683550 | Micromonospora sp. RP3T | Isolate | Unclassified |
| 148 | 2856858025 | Micromonospora aurantiaca 110B(2018) | Isolate | Unclassified |
| 149 | 2857288857 | Micromonospora noduli ONO23 | Isolate | Unclassified |
| 150 | 2857720070 | Microbacterium sp. R-72113 | Isolate | Unclassified |
| 151 | 2858848962 | Micromonospora saelicesensis GAR06 | Isolate | Unclassified |
| 152 | 2858868258 | Micromonospora sp. MH33 | Isolate | Unclassified |
| 153 | 2858882152 | Micromonospora noduli MED15 | Isolate | Nodule |
| 154 | 2858888857 | Micromonospora saelicesensis Lupac 06 | Isolate | Unclassified |
| 155 | 2858895516 | Micromonospora saelicesensis PSN13 | Isolate | Unclassified |
| 156 | 2858902515 | Micromonospora sp. MW-13 | Isolate | Rhizosphere |
| 157 | 2861520306 | Phytomonospora endophytica DSM 45386 | Isolate | Unclassified |
| 158 | 2866065130 | Micromonospora endophytica DSM 45430 | Isolate | Unclassified |
| 159 | 2867302475 | Micromonospora globbae WPS1-2 | Isolate | Unclassified |
| 160 | 2867319477 | Micromonospora musae MS1-9 | Isolate | Unclassified |
| 161 | 2867507094 | Micromonospora zingiberis PLAI 1-1 | Isolate | Unclassified |
| 162 | 2869048445 | Micromonospora saelicesensis PSN01 | Isolate | Unclassified |
| 163 | 2869061728 | Micromonospora noduli ONO86 | Isolate | Unclassified |
| 164 | 2869068681 | Micromonospora noduli GUI43 | Isolate | Unclassified |
| 165 | 2880489317 | Micromonospora ureilytica DSM 101692 | Isolate | Unclassified |
| 166 | 2880495981 | Micromonospora vinacea DSM 101695 | Isolate | Unclassified |
| 167 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 168 | 2895880812 | Frankia sp. BMG5.11 | Isolate | Unclassified |
| 169 | 2902582711 | Micromonospora sp. AP08 | Isolate | Unclassified |
| 170 | 2928090899 | Microbacterium sp. 1262 | Isolate | Rhizosphere |
| 171 | 2929226422 | Micromonospora sp. R-74116 Hybrid assembly | Isolate | Unclassified |
| 172 | 649633069 | Micromonospora sp. L5 | Isolate | Unclassified |
| 173 | 8001781756 | Catellatospora tritici NEAU-YM18 | Isolate | Rhizosphere |
| 174 | 8003856774 | Micromonospora echinofusca MPMI6 | Isolate | Unclassified |
| 175 | 8054704163 | Micromonospora trifolii NIE79 | Isolate | Nodule |
| 176 | 8054727385 | Micromonospora alfalfae MED01 | Isolate | Nodule |
| 177 | 8054734606 | Micromonospora hortensis NIE111 | Isolate | Nodule |
| 178 | 8055037949 | Leucobacter rhizosphaerae H25R-14 | Isolate | Rhizosphere |
| 179 | 8057568493 | Actinorhabdospora filicis NBRC 111898 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 77.78 |
| Metatranscriptomes | 0 |
| Isolates | 22.22 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.71 |
| Nodule | 2.14 |
| Rhizoplane | 7.26 |
| Rhizosphere | 67.09 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070658_10004108 | 3300005327 | Bacteria | 11931 |
| 2 | Ga0068868_100039320 | 3300005338 | Bacteria | 3676 |
| 3 | Ga0070668_100002709 | 3300005347 | Bacteria | 13041 |
| 4 | Ga0070668_100003772 | 3300005347 | Bacteria | 11189 |
| 5 | Ga0070659_100047992 | 3300005366 | Bacteria | 3352 |
| 6 | Ga0070667_100007790 | 3300005367 | Bacteria | 8881 |
| 7 | Ga0070667_100061533 | 3300005367 | Bacteria | 3179 |
| 8 | Ga0070667_100181924 | 3300005367 | Bacteria | 1859 |
| 9 | Ga0070714_100058439 | 3300005435 | Bacteria | 3304 |
| 10 | Ga0070714_100064708 | 3300005435 | Bacteria | 3148 |
| 11 | Ga0070714_100090088 | 3300005435 | Bacteria | 2686 |
| 12 | Ga0070710_10000061 | 3300005437 | Bacteria | 50295 |
| 13 | Ga0070663_100002513 | 3300005455 | Bacteria | 10349 |
| 14 | Ga0070662_100004777 | 3300005457 | Bacteria | 8586 |
| 15 | Ga0070699_100023715 | 3300005518 | Bacteria | 5286 |
| 16 | Ga0070679_100030376 | 3300005530 | Bacteria | 5335 |
| 17 | Ga0070684_100088690 | 3300005535 | Bacteria | 2748 |
| 18 | Ga0068853_100052135 | 3300005539 | Bacteria | 3523 |
| 19 | Ga0070664_100010112 | 3300005564 | Bacteria | 7648 |
| 20 | Ga0068857_100032597 | 3300005577 | Bacteria | 4606 |
| 21 | Ga0068857_100172615 | 3300005577 | Bacteria | 1965 |
| 22 | Ga0068854_100028810 | 3300005578 | Bacteria | 3840 |
| 23 | Ga0070702_100025898 | 3300005615 | Bacteria | 3148 |
| 24 | Ga0068852_100180822 | 3300005616 | Bacteria | 1983 |
| 25 | Ga0068864_100037125 | 3300005618 | Bacteria | 4156 |
| 26 | Ga0068864_100195521 | 3300005618 | Bacteria | 1856 |
| 27 | Ga0068863_100039215 | 3300005841 | Bacteria | 4508 |
| 28 | Ga0068858_100088115 | 3300005842 | Bacteria | 2888 |
| 29 | Ga0081455_10015002 | 3300005937 | Bacteria | 7547 |
| 30 | Ga0081540_1002336 | 3300005983 | Bacteria | 15529 |
| 31 | Ga0081539_10004135 | 3300005985 | Bacteria | 16512 |
| 32 | Ga0070712_100130529 | 3300006175 | Bacteria | 1904 |
| 33 | Ga0075428_100000548 | 3300006844 | Bacteria | 38376 |
| 34 | Ga0075428_100004276 | 3300006844 | Bacteria | 15722 |
| 35 | Ga0075428_100080186 | 3300006844 | Bacteria | 3562 |
| 36 | Ga0075430_100001669 | 3300006846 | Bacteria | 18139 |
| 37 | Ga0075430_100010087 | 3300006846 | Bacteria | 7993 |
| 38 | Ga0075431_100003257 | 3300006847 | Bacteria | 15722 |
| 39 | Ga0075431_100006005 | 3300006847 | Bacteria | 12032 |
| 40 | Ga0075431_100033598 | 3300006847 | Bacteria | 5286 |
| 41 | Ga0075429_100000244 | 3300006880 | Bacteria | 37496 |
| 42 | Ga0075429_100036349 | 3300006880 | Bacteria | 4283 |
| 43 | Ga0105240_10009555 | 3300009093 | Bacteria | 13729 |
| 44 | Ga0111539_10025523 | 3300009094 | Bacteria | 7245 |
| 45 | Ga0105245_10045369 | 3300009098 | Bacteria | 3926 |
| 46 | Ga0105245_10162958 | 3300009098 | Bacteria | 2117 |
| 47 | Ga0114129_10000130 | 3300009147 | Bacteria | 77049 |
| 48 | Ga0114129_10000723 | 3300009147 | Bacteria | 41902 |
| 49 | Ga0114129_10024263 | 3300009147 | Bacteria | 8591 |
| 50 | Ga0114129_10169108 | 3300009147 | Bacteria | 2981 |
| 51 | Ga0105248_10006402 | 3300009177 | Bacteria | 12918 |
| 52 | Ga0105248_10011489 | 3300009177 | Bacteria | 9757 |
| 53 | Ga0105237_10038610 | 3300009545 | Bacteria | 4821 |
| 54 | Ga0157369_10004788 | 3300013105 | Bacteria | 15907 |
| 55 | Ga0163163_10012421 | 3300014325 | Bacteria | 7759 |
| 56 | Ga0163163_10131596 | 3300014325 | Bacteria | 2542 |
| 57 | Ga0163163_10135175 | 3300014325 | Bacteria | 2507 |
| 58 | Ga0157380_10156418 | 3300014326 | Bacteria | 1976 |
| 59 | Ga0157377_10000412 | 3300014745 | Bacteria | 18566 |
| 60 | Ga0157379_10021869 | 3300014968 | Bacteria | 5666 |
| 61 | Ga0157379_10151994 | 3300014968 | Bacteria | 2088 |
| 62 | Ga0213876_10001219 | 3300021384 | Bacteria | 16232 |
| 63 | Ga0207692_10002220 | 3300025898 | Bacteria | 7428 |
| 64 | Ga0207705_10009899 | 3300025909 | Bacteria | 6941 |
| 65 | Ga0207707_10054300 | 3300025912 | Bacteria | 3487 |
| 66 | Ga0207671_10023017 | 3300025914 | Bacteria | 4702 |
| 67 | Ga0207693_10062311 | 3300025915 | Bacteria | 2922 |
| 68 | Ga0207652_10036558 | 3300025921 | Bacteria | 4151 |
| 69 | Ga0207687_10003225 | 3300025927 | Bacteria | 11043 |
| 70 | Ga0207687_10046437 | 3300025927 | Bacteria | 3007 |
| 71 | Ga0207664_10138454 | 3300025929 | Bacteria | 2056 |
| 72 | Ga0207706_10005138 | 3300025933 | Bacteria | 12214 |
| 73 | Ga0207711_10034577 | 3300025941 | Bacteria | 4280 |
| 74 | Ga0207689_10003272 | 3300025942 | Bacteria | 14852 |
| 75 | Ga0207689_10088196 | 3300025942 | Bacteria | 2548 |
| 76 | Ga0207661_10001793 | 3300025944 | Bacteria | 14674 |
| 77 | Ga0207667_10245775 | 3300025949 | Bacteria | 1831 |
| 78 | Ga0207668_10001583 | 3300025972 | Bacteria | 13306 |
| 79 | Ga0207668_10041699 | 3300025972 | Bacteria | 3104 |
| 80 | Ga0207640_10056752 | 3300025981 | Bacteria | 2573 |
| 81 | Ga0207658_10027574 | 3300025986 | Bacteria | 3992 |
| 82 | Ga0207678_10000171 | 3300026067 | Bacteria | 54729 |
| 83 | Ga0207678_10004168 | 3300026067 | Bacteria | 12977 |
| 84 | Ga0207708_10022250 | 3300026075 | Bacteria | 4786 |
| 85 | Ga0207641_10021677 | 3300026088 | Bacteria | 5279 |
| 86 | Ga0207674_10013397 | 3300026116 | Bacteria | 9102 |
| 87 | Ga0207674_10023967 | 3300026116 | Bacteria | 6526 |
| 88 | Ga0207674_10025481 | 3300026116 | Bacteria | 6306 |
| 89 | Ga0207683_10121556 | 3300026121 | Bacteria | 2345 |
| 90 | Ga0207698_10042848 | 3300026142 | Bacteria | 3386 |
| 91 | Ga0207428_10025122 | 3300027907 | Bacteria | 4989 |
| 92 | Ga0307517_10113550 | 3300028786 | Bacteria | 2044 |
| 93 | Ga0307515_10000182 | 3300028794 | Bacteria | 154288 |
| 94 | Ga0307515_10009461 | 3300028794 | Bacteria | 18832 |
| 95 | Ga0307512_10004147 | 3300030522 | Bacteria | 16071 |
| 96 | Ga0307512_10049651 | 3300030522 | Bacteria | 3381 |
| 97 | Ga0316176_1037392 | 3300030732 | Bacteria | 4330 |
| 98 | Ga0307513_10005579 | 3300031456 | Bacteria | 16592 |
| 99 | Ga0307508_10005865 | 3300031616 | Bacteria | 11590 |
| 100 | Ga0307508_10051365 | 3300031616 | Bacteria | 3665 |
| 101 | Ga0307516_10000395 | 3300031730 | Bacteria | 56947 |
| 102 | Ga0307516_10053084 | 3300031730 | Bacteria | 3965 |
| 103 | Ga0307405_10035063 | 3300031731 | Bacteria | 2993 |
| 104 | Ga0307518_10000054 | 3300031838 | Bacteria | 76765 |
| 105 | Ga0307410_10002271 | 3300031852 | Bacteria | 9208 |
| 106 | Ga0307410_10092221 | 3300031852 | Bacteria | 2153 |
| 107 | Ga0307406_10008138 | 3300031901 | Bacteria | 5841 |
| 108 | Ga0307409_100000570 | 3300031995 | Bacteria | 16038 |
| 109 | Ga0307409_100116273 | 3300031995 | Bacteria | 2254 |
| 110 | Ga0307415_100000023 | 3300032126 | Bacteria | 64440 |
| 111 | Ga0307415_100160990 | 3300032126 | Bacteria | 1740 |
| 112 | Ga0307507_10001045 | 3300033179 | Bacteria | 61644 |
| 113 | Ga0307507_10032864 | 3300033179 | Bacteria | 5402 |
| 114 | Ga0373951_0000546 | 3300035091 | Bacteria | 10585 |
| 115 | Ga0373942_0015835 | 3300035207 | Bacteria | 1842 |
| 116 | Ga0395900_0003750 | 3300037418 | Bacteria | 16323 |
| 117 | Ga0395898_0047936 | 3300037466 | Bacteria | 4191 |
| 118 | Ga0395905_0001026 | 3300037471 | Bacteria | 35609 |
| 119 | Ga0395901_0004693 | 3300038443 | Bacteria | 13783 |
| 120 | Ga0395901_0015084 | 3300038443 | Bacteria | 7859 |
| 121 | Ga0436365_0093685 | 3300039437 | Bacteria | 33238 |
| 122 | Ga0451853_0107309 | 3300041512 | Bacteria | 3744 |
| 123 | Ga0466969_0051142 | 3300044656 | Bacteria | 2034 |
| 124 | Ga0466972_0005333 | 3300044658 | Bacteria | 6439 |
| 125 | Ga0466965_0009760 | 3300044683 | Bacteria | 4465 |
| 126 | Ga0466966_0001435 | 3300044684 | Bacteria | 15323 |
| 127 | Ga0466961_0106339 | 3300044693 | Bacteria | 1766 |
| 128 | Ga0466970_0030653 | 3300044765 | Bacteria | 2837 |
| 129 | Ga0466970_0071858 | 3300044765 | Bacteria | 1861 |
| 130 | Ga0466957_0094043 | 3300044842 | Bacteria | 1882 |
| 131 | Ga0466960_0000855 | 3300044901 | Bacteria | 10747 |
| 132 | Ga0466960_0018698 | 3300044901 | Bacteria | 3042 |
| 133 | Ga0466959_0000299 | 3300045049 | Bacteria | 29557 |
| 134 | Ga0466959_0007575 | 3300045049 | Bacteria | 7629 |
| 135 | Ga0451576_0166337 | 3300045051 | Bacteria | 2302 |
| 136 | Ga0466958_0071090 | 3300045836 | Bacteria | 2130 |
| 137 | Ga0495606_0010018 | 3300046507 | Bacteria | 7925 |
| 138 | Ga0495608_0034862 | 3300046511 | Bacteria | 3397 |
| 139 | Ga0495632_0091896 | 3300046519 | Bacteria | 1438 |
| 140 | Ga0495668_0000477 | 3300046616 | Bacteria | 50176 |
| 141 | Ga0495625_0000969 | 3300046660 | Bacteria | 38144 |
| 142 | Ga0495674_0096554 | 3300047319 | Bacteria | 2519 |
| 143 | Ga0495626_0000234 | 3300048091 | Bacteria | 65050 |
| 144 | Ga0496104_0031235 | 3300048907 | Bacteria | 4952 |
| 145 | Ga0496105_0056475 | 3300048908 | Bacteria | 3240 |
| 146 | Ga0496108_0000149 | 3300048911 | Bacteria | 67412 |
| 147 | Ga0496108_0006948 | 3300048911 | Bacteria | 9162 |
| 148 | Ga0496109_0012590 | 3300048912 | Bacteria | 7304 |
| 149 | Ga0496110_0004686 | 3300048913 | Bacteria | 10636 |
| 150 | Ga0496110_0008569 | 3300048913 | Bacteria | 8232 |
| 151 | Ga0496110_0025644 | 3300048913 | Bacteria | 5041 |
| 152 | Ga0496111_0040381 | 3300048914 | Bacteria | 3347 |
| 153 | Ga0496111_0096296 | 3300048914 | Bacteria | 2172 |
| 154 | Ga0496112_0004910 | 3300048915 | Bacteria | 11440 |
| 155 | Ga0496112_0016085 | 3300048915 | Bacteria | 6995 |
| 156 | Ga0496112_0076842 | 3300048915 | Bacteria | 3302 |
| 157 | Ga0496112_0363860 | 3300048915 | Bacteria | 1388 |
| 158 | Ga0496113_0002435 | 3300048916 | Bacteria | 10819 |
| 159 | Ga0496113_0076171 | 3300048916 | Bacteria | 2562 |
| 160 | Ga0496114_0015590 | 3300048917 | Bacteria | 6110 |
| 161 | Ga0496119_0014366 | 3300048922 | Bacteria | 6205 |
| 162 | Ga0496124_0028080 | 3300048927 | Bacteria | 5037 |
| 163 | Ga0496126_0263326 | 3300048929 | Bacteria | 1433 |
| 164 | Ga0501034_0022686 | 3300049571 | Bacteria | 6394 |
| 165 | Ga0501047_0032579 | 3300049581 | Bacteria | 5031 |
| 166 | nmdc:mga05p37_20038_c1 | 3300050507 | Bacteria | 8093 |
| 167 | nmdc:mga05p37_23272_c1 | 3300050507 | Bacteria | 7515 |
| 168 | nmdc:mga05p37_3122_c1 | 3300050507 | Bacteria | 19253 |
| 169 | nmdc:mga05p37_5990_c1 | 3300050507 | Bacteria | 14313 |
| 170 | nmdc:mga09592_794_c1 | 3300050508 | Bacteria | 24428 |
| 171 | nmdc:mga0qj67_1441_c1 | 3300050509 | Bacteria | 16661 |
| 172 | nmdc:mga0qj67_16723_c1 | 3300050509 | Bacteria | 5569 |
| 173 | nmdc:mga0qj67_182586_c1 | 3300050509 | Bacteria | 1704 |
| 174 | nmdc:mga0qj67_193_c1 | 3300050509 | Bacteria | 41569 |
| 175 | nmdc:mga06r32_275_c1 | 3300050510 | Bacteria | 42703 |
| 176 | nmdc:mga06r32_53392_c1 | 3300050510 | Bacteria | 3871 |
| 177 | nmdc:mga06r32_66476_c1 | 3300050510 | Bacteria | 3479 |
| 178 | nmdc:mga08y16_17213_c1 | 3300050511 | Bacteria | 7608 |
| 179 | Ga0500643_000340 | 3300053087 | Bacteria | 37017 |
| 180 | Ga0500646_0000970 | 3300053090 | Bacteria | 7880 |
| 181 | Ga0500559_0001934 | 3300053136 | Bacteria | 11215 |
| 182 | Ga0500568_0020349 | 3300053139 | Bacteria | 2871 |
| 183 | 2996227949 | 2996221748 | Bacteria | 6799777 |
| 184 | 2501942797 | 2501939600 | Bacteria | 6907073 |
| 185 | 2515494888 | 2515154088 | Bacteria | 5526283 |
| 186 | 2515718892 | 2515154129 | Bacteria | 5584369 |
| 187 | 2515755551 | 2515154137 | Bacteria | 5711575 |
| 188 | 2516083104 | 2515154202 | Bacteria | 5471270 |
| 189 | 2516090190 | 2515154203 | Bacteria | 5458536 |
| 190 | 2623587994 | 2622736626 | Bacteria | 7181580 |
| 191 | 2676487069 | 2675903059 | Bacteria | 8644972 |
| 192 | 2686537820 | 2684623035 | Bacteria | 8032739 |
| 193 | 2738668742 | 2738541264 | Bacteria | 5935393 |
| 194 | 2739147934 | 2738541356 | Bacteria | 5935017 |
| 195 | 2772643626 | 2772190715 | Bacteria | 6959372 |
| 196 | 2816510447 | 2816332139 | Bacteria | 9138787 |
| 197 | 2831936635 | 2831935698 | Bacteria | 5963223 |
| 198 | 2832008511 | 2832004796 | Bacteria | 6538017 |
| 199 | 2852645481 | 2852643534 | Bacteria | 3013378 |
| 200 | 2855675204 | 2855670206 | Bacteria | 7120389 |
| 201 | 2855681983 | 2855676851 | Bacteria | 7063653 |
| 202 | 2855686841 | 2855683550 | Bacteria | 7134265 |
| 203 | 2856862021 | 2856858025 | Bacteria | 7255264 |
| 204 | 2857289214 | 2857288857 | Bacteria | 7189066 |
| 205 | 2857720332 | 2857720070 | Bacteria | 3189373 |
| 206 | 2858850036 | 2858848962 | Bacteria | 6963058 |
| 207 | 2858875882 | 2858868258 | Bacteria | 7683772 |
| 208 | 2858883452 | 2858882152 | Bacteria | 7230291 |
| 209 | 2858891943 | 2858888857 | Bacteria | 7060307 |
| 210 | 2858899368 | 2858895516 | Bacteria | 7378898 |
| 211 | 2858907814 | 2858902515 | Bacteria | 7086037 |
| 212 | 2861527667 | 2861520306 | Bacteria | 8348283 |
| 213 | 2866065302 | 2866065130 | Bacteria | 6518152 |
| 214 | 2867307808 | 2867302475 | Bacteria | 7087181 |
| 215 | 2867320128 | 2867319477 | Bacteria | 7069771 |
| 216 | 2867508615 | 2867507094 | Bacteria | 6506033 |
| 217 | 2869049122 | 2869048445 | Bacteria | 6875584 |
| 218 | 2869067978 | 2869061728 | Bacteria | 7112407 |
| 219 | 2869073411 | 2869068681 | Bacteria | 7205615 |
| 220 | 2880492065 | 2880489317 | Bacteria | 7096270 |
| 221 | 2880500233 | 2880495981 | Bacteria | 7340502 |
| 222 | 2887486831 | 2887478801 | Bacteria | 8972725 |
| 223 | 2895888715 | 2895880812 | Bacteria | 11255272 |
| 224 | 2902586683 | 2902582711 | Bacteria | 6187705 |
| 225 | 2928091831 | 2928090899 | Bacteria | 3158267 |
| 226 | 2929228784 | 2929226422 | Bacteria | 7248583 |
| 227 | 649812621 | 649633069 | Bacteria | 6962533 |
| 228 | 8001786841 | 8001781756 | Bacteria | 9586736 |
| 229 | 8003860398 | 8003856774 | Bacteria | 7675274 |
| 230 | 8054707132 | 8054704163 | Bacteria | 7247792 |
| 231 | 8054731781 | 8054727385 | Bacteria | 7558670 |
| 232 | 8054738927 | 8054734606 | Bacteria | 6947278 |
| 233 | 8055038682 | 8055037949 | Bacteria | 3337834 |
| 234 | 8057568554 | 8057568493 | Bacteria | 7221719 |
| 235 | Ga0070658_10004108 | |||
| 236 | Ga0068868_100039320 | |||
| 237 | Ga0070668_100002709 | |||
| 238 | Ga0070668_100003772 | |||
| 239 | Ga0070659_100047992 | |||
| 240 | Ga0070667_100007790 | |||
| 241 | Ga0070667_100061533 | |||
| 242 | Ga0070667_100181924 | |||
| 243 | Ga0070714_100058439 | |||
| 244 | Ga0070714_100064708 | |||
| 245 | Ga0070714_100090088 | |||
| 246 | Ga0070710_10000061 | |||
| 247 | Ga0070663_100002513 | |||
| 248 | Ga0070662_100004777 | |||
| 249 | Ga0070699_100023715 | |||
| 250 | Ga0070679_100030376 | |||
| 251 | Ga0070684_100088690 | |||
| 252 | Ga0068853_100052135 | |||
| 253 | Ga0070664_100010112 | |||
| 254 | Ga0068857_100032597 | |||
| 255 | Ga0068857_100172615 | |||
| 256 | Ga0068854_100028810 | |||
| 257 | Ga0070702_100025898 | |||
| 258 | Ga0068852_100180822 | |||
| 259 | Ga0068864_100037125 | |||
| 260 | Ga0068864_100195521 | |||
| 261 | Ga0068863_100039215 | |||
| 262 | Ga0068858_100088115 | |||
| 263 | Ga0081455_10015002 | |||
| 264 | Ga0081540_1002336 | |||
| 265 | Ga0081539_10004135 | |||
| 266 | Ga0070712_100130529 | |||
| 267 | Ga0075428_100000548 | |||
| 268 | Ga0075428_100004276 | |||
| 269 | Ga0075428_100080186 | |||
| 270 | Ga0075430_100001669 | |||
| 271 | Ga0075430_100010087 | |||
| 272 | Ga0075431_100003257 | |||
| 273 | Ga0075431_100006005 | |||
| 274 | Ga0075431_100033598 | |||
| 275 | Ga0075429_100000244 | |||
| 276 | Ga0075429_100036349 | |||
| 277 | Ga0105240_10009555 | |||
| 278 | Ga0111539_10025523 | |||
| 279 | Ga0105245_10045369 | |||
| 280 | Ga0105245_10162958 | |||
| 281 | Ga0114129_10000130 | |||
| 282 | Ga0114129_10000723 | |||
| 283 | Ga0114129_10024263 | |||
| 284 | Ga0114129_10169108 | |||
| 285 | Ga0105248_10006402 | |||
| 286 | Ga0105248_10011489 | |||
| 287 | Ga0105237_10038610 | |||
| 288 | Ga0157369_10004788 | |||
| 289 | Ga0163163_10012421 | |||
| 290 | Ga0163163_10131596 | |||
| 291 | Ga0163163_10135175 | |||
| 292 | Ga0157380_10156418 | |||
| 293 | Ga0157377_10000412 | |||
| 294 | Ga0157379_10021869 | |||
| 295 | Ga0157379_10151994 | |||
| 296 | Ga0213876_10001219 | |||
| 297 | Ga0207692_10002220 | |||
| 298 | Ga0207705_10009899 | |||
| 299 | Ga0207707_10054300 | |||
| 300 | Ga0207671_10023017 | |||
| 301 | Ga0207693_10062311 | |||
| 302 | Ga0207652_10036558 | |||
| 303 | Ga0207687_10003225 | |||
| 304 | Ga0207687_10046437 | |||
| 305 | Ga0207664_10138454 | |||
| 306 | Ga0207706_10005138 | |||
| 307 | Ga0207711_10034577 | |||
| 308 | Ga0207689_10003272 | |||
| 309 | Ga0207689_10088196 | |||
| 310 | Ga0207661_10001793 | |||
| 311 | Ga0207667_10245775 | |||
| 312 | Ga0207668_10001583 | |||
| 313 | Ga0207668_10041699 | |||
| 314 | Ga0207640_10056752 | |||
| 315 | Ga0207658_10027574 | |||
| 316 | Ga0207678_10000171 | |||
| 317 | Ga0207678_10004168 | |||
| 318 | Ga0207708_10022250 | |||
| 319 | Ga0207641_10021677 | |||
| 320 | Ga0207674_10013397 | |||
| 321 | Ga0207674_10023967 | |||
| 322 | Ga0207674_10025481 | |||
| 323 | Ga0207683_10121556 | |||
| 324 | Ga0207698_10042848 | |||
| 325 | Ga0207428_10025122 | |||
| 326 | Ga0307517_10113550 | |||
| 327 | Ga0307515_10000182 | |||
| 328 | Ga0307515_10009461 | |||
| 329 | Ga0307512_10004147 | |||
| 330 | Ga0307512_10049651 | |||
| 331 | Ga0316176_1037392 | |||
| 332 | Ga0307513_10005579 | |||
| 333 | Ga0307508_10005865 | |||
| 334 | Ga0307508_10051365 | |||
| 335 | Ga0307516_10000395 | |||
| 336 | Ga0307516_10053084 | |||
| 337 | Ga0307405_10035063 | |||
| 338 | Ga0307518_10000054 | |||
| 339 | Ga0307410_10002271 | |||
| 340 | Ga0307410_10092221 | |||
| 341 | Ga0307406_10008138 | |||
| 342 | Ga0307409_100000570 | |||
| 343 | Ga0307409_100116273 | |||
| 344 | Ga0307415_100000023 | |||
| 345 | Ga0307415_100160990 | |||
| 346 | Ga0307507_10001045 | |||
| 347 | Ga0307507_10032864 | |||
| 348 | Ga0373951_0000546 | |||
| 349 | Ga0373942_0015835 | |||
| 350 | Ga0395900_0003750 | |||
| 351 | Ga0395898_0047936 | |||
| 352 | Ga0395905_0001026 | |||
| 353 | Ga0395901_0004693 | |||
| 354 | Ga0395901_0015084 | |||
| 355 | Ga0436365_0093685 | |||
| 356 | Ga0451853_0107309 | |||
| 357 | Ga0466969_0051142 | |||
| 358 | Ga0466972_0005333 | |||
| 359 | Ga0466965_0009760 | |||
| 360 | Ga0466966_0001435 | |||
| 361 | Ga0466961_0106339 | |||
| 362 | Ga0466970_0030653 | |||
| 363 | Ga0466970_0071858 | |||
| 364 | Ga0466957_0094043 | |||
| 365 | Ga0466960_0000855 | |||
| 366 | Ga0466960_0018698 | |||
| 367 | Ga0466959_0000299 | |||
| 368 | Ga0466959_0007575 | |||
| 369 | Ga0451576_0166337 | |||
| 370 | Ga0466958_0071090 | |||
| 371 | Ga0495606_0010018 | |||
| 372 | Ga0495608_0034862 | |||
| 373 | Ga0495632_0091896 | |||
| 374 | Ga0495668_0000477 | |||
| 375 | Ga0495625_0000969 | |||
| 376 | Ga0495674_0096554 | |||
| 377 | Ga0495626_0000234 | |||
| 378 | Ga0496104_0031235 | |||
| 379 | Ga0496105_0056475 | |||
| 380 | Ga0496108_0000149 | |||
| 381 | Ga0496108_0006948 | |||
| 382 | Ga0496109_0012590 | |||
| 383 | Ga0496110_0004686 | |||
| 384 | Ga0496110_0008569 | |||
| 385 | Ga0496110_0025644 | |||
| 386 | Ga0496111_0040381 | |||
| 387 | Ga0496111_0096296 | |||
| 388 | Ga0496112_0004910 | |||
| 389 | Ga0496112_0016085 | |||
| 390 | Ga0496112_0076842 | |||
| 391 | Ga0496112_0363860 | |||
| 392 | Ga0496113_0002435 | |||
| 393 | Ga0496113_0076171 | |||
| 394 | Ga0496114_0015590 | |||
| 395 | Ga0496119_0014366 | |||
| 396 | Ga0496124_0028080 | |||
| 397 | Ga0496126_0263326 | |||
| 398 | Ga0501034_0022686 | |||
| 399 | Ga0501047_0032579 | |||
| 400 | nmdc:mga05p37_20038_c1 | |||
| 401 | nmdc:mga05p37_23272_c1 | |||
| 402 | nmdc:mga05p37_3122_c1 | |||
| 403 | nmdc:mga05p37_5990_c1 | |||
| 404 | nmdc:mga09592_794_c1 | |||
| 405 | nmdc:mga0qj67_1441_c1 | |||
| 406 | nmdc:mga0qj67_16723_c1 | |||
| 407 | nmdc:mga0qj67_182586_c1 | |||
| 408 | nmdc:mga0qj67_193_c1 | |||
| 409 | nmdc:mga06r32_275_c1 | |||
| 410 | nmdc:mga06r32_53392_c1 | |||
| 411 | nmdc:mga06r32_66476_c1 | |||
| 412 | nmdc:mga08y16_17213_c1 | |||
| 413 | Ga0500643_000340 | |||
| 414 | Ga0500646_0000970 | |||
| 415 | Ga0500559_0001934 | |||
| 416 | Ga0500568_0020349 | |||
| 417 | 2996227949 | |||
| 418 | 2501942797 | |||
| 419 | 2515494888 | |||
| 420 | 2515718892 | |||
| 421 | 2515755551 | |||
| 422 | 2516083104 | |||
| 423 | 2516090190 | |||
| 424 | 2623587994 | |||
| 425 | 2676487069 | |||
| 426 | 2686537820 | |||
| 427 | 2738668742 | |||
| 428 | 2739147934 | |||
| 429 | 2772643626 | |||
| 430 | 2816510447 | |||
| 431 | 2831936635 | |||
| 432 | 2832008511 | |||
| 433 | 2852645481 | |||
| 434 | 2855675204 | |||
| 435 | 2855681983 | |||
| 436 | 2855686841 | |||
| 437 | 2856862021 | |||
| 438 | 2857289214 | |||
| 439 | 2857720332 | |||
| 440 | 2858850036 | |||
| 441 | 2858875882 | |||
| 442 | 2858883452 | |||
| 443 | 2858891943 | |||
| 444 | 2858899368 | |||
| 445 | 2858907814 | |||
| 446 | 2861527667 | |||
| 447 | 2866065302 | |||
| 448 | 2867307808 | |||
| 449 | 2867320128 | |||
| 450 | 2867508615 | |||
| 451 | 2869049122 | |||
| 452 | 2869067978 | |||
| 453 | 2869073411 | |||
| 454 | 2880492065 | |||
| 455 | 2880500233 | |||
| 456 | 2887486831 | |||
| 457 | 2895888715 | |||
| 458 | 2902586683 | |||
| 459 | 2928091831 | |||
| 460 | 2929228784 | |||
| 461 | 649812621 | |||
| 462 | 8001786841 | |||
| 463 | 8003860398 | |||
| 464 | 8054707132 | |||
| 465 | 8054731781 | |||
| 466 | 8054738927 | |||
| 467 | 8055038682 | |||
| 468 | 8057568554 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4eya-assembly1.cif.gz_A | crystal structure of a plectonemic rna supercoil | 0.8786 | 1 | 129 |
| 3r2d-assembly1.cif.gz_A | crystal structure of antitermination factors nusb and nuse in complex with dsrna | 0.8766 | 4 | 129 |
| 3d3c-assembly3.cif.gz_C | structural and functional analysis of the e. coli nusb-s10 transcription antitermination complex. | 0.8759 | 4 | 128 |
| 3imq-assembly1.cif.gz_A | crystal structure of the nusb101-s10(delta loop) complex | 0.868 | 1 | 128 |
| 1tzx-assembly2.cif.gz_B | t. maritima nusb, p3221 | 0.8606 | 1 | 135 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WGX3_13_148_1.10.940.10 | Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like | 0.9764 | 5 | 139 | 1.10.940.10 |
| af_P9WGX3_13_148_1.10.940.10 | Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like | 0.9624 | 5 | 139 | 1.10.940.10 |
| af_P9WGX3_161_455_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9546 | 149 | 431 | 3.40.50.150 |
| af_Q2FZ67_2_133_1.10.940.10 | Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like | 0.9325 | 7 | 131 | 1.10.940.10 |
| af_P9WGX3_161_455_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9136 | 149 | 431 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A838SKZ7-F1-model_v4 | rRNA cytosine-C5-methyltransferase | 0.99 | 6 | 174 |
GO:0003723
GO:0006355 GO:0008168 GO:0032259 |
| AF-A0A4R4ZZM3-F1-model_v4 | rRNA cytosine-C5-methyltransferase | 0.9824 | 16 | 434 |
GO:0001510
GO:0003723 GO:0006355 GO:0008173 |
| AF-A0A847IGV3-F1-model_v4 | rRNA small subunit methyltransferase B | 0.9808 | 5 | 127 |
GO:0003723
GO:0006355 GO:0008168 GO:0032259 |
| AF-A0A1R3UGX9-F1-model_v4 | Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) | 0.9749 | 15 | 434 |
GO:0001510
GO:0003723 GO:0006355 GO:0008173 |
| AF-A0A7K1CMW3-F1-model_v4 | SAM-dependent MTase RsmB/NOP-type domain-containing protein | 0.9745 | 315 | 434 |
GO:0001510
GO:0003723 GO:0008173 |