F347529

General Info

Members Datasets Scaffolds Average Seq Length
234 145 468 641

Family's Representative Sequence

Representative Sequence 3300049591|Ga0501075_0057640|Ga0501075_0057640_236_2254
Length 672
Sequence MSRALDCLGYGLVSDMPDLRLVPKPELDRFRAADVDPDARLALLADACRLNALVAVKRAGSGHLGSTFSALDVVVHLLFEELDVAERGFDDPHRDVFFSSKGHDVPGLYATLFALGVIPRERLLRLRRLGGLDGHPDVGVPGIEASSGSLGMGISKGRGIALAKRMLGRGGRVVVMTGDGELQEGQNWEALQAAAHERLGRLWVVVDRNEVQSDKPTEEIVALGDLEGKLRAFGWHVEIVDGHCHAALRTAFARFREGDERPKALVAQTIKGKGVSFMEHPVALAEGGGTYRWHAGAPGDEPFAGAVRELEARLAARCAALGLDPPALEVVEPEAPVRGLEGEPESGAGARAKPSVADEYVVEAYGDTLLQLGAEREDLVALDADLASDCRTRAFELAYPARFFQCGIAEQDMVSTAAGMARHGLLPVVNSFASFLASRANEQIYNQASEGSKVVYALHYAGLIPAGPGKSHQSVRDISLLGALPNVAIVQPGSAEETGALLRWAVEDADETVAMRLAIGPSPRRLALPGRVSTVGHGSVLRDGTDAVLLAYGPVMLHEALLAAERLTDDGELSLRVVAMPWLNRFDAEWLGAEIAPFEHVFVLEDHAPVGGLGDGLRGALPGLTATVFGVEGWPACGTPAEALGFHALDGASLATRIAARAGRRAGSPAAR

Samples

Sample ID Description Type Environment
1 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
78 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
79 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
80 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
81 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
82 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
88 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
89 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
90 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
94 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
97 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
98 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
99 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
100 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
101 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
102 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
105 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
114 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
141 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
142 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.71
Nodule 0
Rhizoplane 12.82
Rhizosphere 85.47
Stem 0
Stem Tuber 0
Unclassified 1.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501075_0057640 3300049591 Bacteria 2925
2 JGI24744J21845_10002892 3300002077 Bacteria 3510
3 Ga0065704_10005583 3300005289 Bacteria 5172
4 Ga0065707_10002623 3300005295 Bacteria 4418
5 Ga0070683_100007814 3300005329 Bacteria 9057
6 Ga0070683_100011043 3300005329 Bacteria 7784
7 Ga0070683_100031032 3300005329 Bacteria 4856
8 Ga0070670_100001396 3300005331 Bacteria 19370
9 Ga0070680_100042466 3300005336 Bacteria 3690
10 Ga0070680_100062214 3300005336 Bacteria 3056
11 Ga0070660_100016054 3300005339 Bacteria 5426
12 Ga0070674_100004027 3300005356 Bacteria 8329
13 Ga0070674_100015525 3300005356 Bacteria 4755
14 Ga0070688_100009996 3300005365 Bacteria 5213
15 Ga0070659_100037930 3300005366 Bacteria 3757
16 Ga0070659_100073432 3300005366 Bacteria 2723
17 Ga0070713_100076905 3300005436 Bacteria 2836
18 Ga0070700_100000807 3300005441 Bacteria 15360
19 Ga0070700_100023283 3300005441 Bacteria 3620
20 Ga0070678_100107379 3300005456 Bacteria 2177
21 Ga0070681_10040023 3300005458 Bacteria 4699
22 Ga0068867_100000715 3300005459 Bacteria 22149
23 Ga0070706_100004396 3300005467 Bacteria 13614
24 Ga0070706_100173916 3300005467 Bacteria 2010
25 Ga0070707_100000740 3300005468 Bacteria 32344
26 Ga0070698_100005271 3300005471 Bacteria 14144
27 Ga0070699_100005792 3300005518 Bacteria 10809
28 Ga0070699_100008706 3300005518 Bacteria 8798
29 Ga0070679_100003075 3300005530 Bacteria 15259
30 Ga0070684_100043071 3300005535 Bacteria 3898
31 Ga0070686_100007292 3300005544 Bacteria 6165
32 Ga0070696_100002523 3300005546 Bacteria 12123
33 Ga0070696_100015803 3300005546 Bacteria 5073
34 Ga0070696_100019397 3300005546 Bacteria 4605
35 Ga0070704_100003858 3300005549 Bacteria 8632
36 Ga0070704_100023316 3300005549 Bacteria 4040
37 Ga0070664_100027043 3300005564 Bacteria 4765
38 Ga0068856_100026450 3300005614 Bacteria 5659
39 Ga0068856_100045326 3300005614 Bacteria 4330
40 Ga0070702_100002975 3300005615 Bacteria 7487
41 Ga0070702_100008503 3300005615 Bacteria 4976
42 Ga0070702_100021095 3300005615 Bacteria 3422
43 Ga0068866_10002082 3300005718 Bacteria 8316
44 Ga0068866_10030721 3300005718 Bacteria 2581
45 Ga0068861_100058549 3300005719 Bacteria 2947
46 Ga0068861_100094502 3300005719 Bacteria 2366
47 Ga0068870_10008869 3300005840 Bacteria 4541
48 Ga0081455_10035453 3300005937 Bacteria 4457
49 Ga0081539_10001615 3300005985 Bacteria 36975
50 Ga0075365_10025461 3300006038 Bacteria 3746
51 Ga0075365_10036055 3300006038 Bacteria 3204
52 Ga0075364_10004993 3300006051 Bacteria 7693
53 Ga0075428_100009004 3300006844 Bacteria 11073
54 Ga0075431_100001319 3300006847 Bacteria 22677
55 Ga0075433_10037222 3300006852 Bacteria 4196
56 Ga0068865_100000203 3300006881 Bacteria 33028
57 Ga0111539_10005437 3300009094 Bacteria 16472
58 Ga0111539_10025805 3300009094 Bacteria 7196
59 Ga0111539_10194879 3300009094 Bacteria 2363
60 Ga0105245_10003975 3300009098 Bacteria 13147
61 Ga0105245_10011913 3300009098 Bacteria 7562
62 Ga0105245_10069007 3300009098 Bacteria 3205
63 Ga0114129_10022482 3300009147 Bacteria 8950
64 Ga0114129_10031788 3300009147 Bacteria 7462
65 Ga0105243_10000600 3300009148 Bacteria 35955
66 Ga0105243_10014222 3300009148 Bacteria 6022
67 Ga0105249_10001010 3300009553 Bacteria 24909
68 Ga0105239_10002392 3300010375 Bacteria 23925
69 Ga0105246_10004180 3300011119 Bacteria 8774
70 Ga0157369_10086362 3300013105 Bacteria 3350
71 Ga0157374_10048163 3300013296 Bacteria 3954
72 Ga0163162_10017272 3300013306 Bacteria 7059
73 Ga0157372_10040509 3300013307 Bacteria 5146
74 Ga0157372_10052511 3300013307 Bacteria 4539
75 Ga0157375_10012493 3300013308 Bacteria 7536
76 Ga0157375_10015011 3300013308 Bacteria 6928
77 Ga0157375_10021837 3300013308 Bacteria 5881
78 Ga0163163_10141778 3300014325 Bacteria 2446
79 Ga0163163_10143485 3300014325 Bacteria 2431
80 Ga0157380_10007384 3300014326 Bacteria 7804
81 Ga0157380_10018255 3300014326 Bacteria 5205
82 Ga0157376_10074986 3300014969 Bacteria 2885
83 Ga0157376_10082118 3300014969 Bacteria 2769
84 Ga0207692_10009989 3300025898 Bacteria 3981
85 Ga0207688_10002151 3300025901 Bacteria 10598
86 Ga0207688_10018174 3300025901 Bacteria 3827
87 Ga0207707_10043594 3300025912 Bacteria 3912
88 Ga0207693_10014173 3300025915 Bacteria 6420
89 Ga0207693_10035530 3300025915 Bacteria 3929
90 Ga0207646_10004376 3300025922 Bacteria 15376
91 Ga0207650_10006231 3300025925 Bacteria 8128
92 Ga0207650_10016287 3300025925 Bacteria 5193
93 Ga0207687_10032084 3300025927 Bacteria 3555
94 Ga0207700_10027808 3300025928 Bacteria 3966
95 Ga0207644_10065798 3300025931 Bacteria 2637
96 Ga0207709_10000563 3300025935 Bacteria 31433
97 Ga0207669_10003419 3300025937 Bacteria 6867
98 Ga0207704_10000527 3300025938 Bacteria 17024
99 Ga0207661_10000308 3300025944 Bacteria 31187
100 Ga0207668_10034832 3300025972 Bacteria 3347
101 Ga0207703_10023639 3300026035 Bacteria 4832
102 Ga0207708_10002310 3300026075 Bacteria 14019
103 Ga0207708_10006294 3300026075 Bacteria 8799
104 Ga0207702_10016335 3300026078 Bacteria 6144
105 Ga0207648_10005854 3300026089 Bacteria 12304
106 Ga0207648_10048724 3300026089 Bacteria 3708
107 Ga0207674_10108154 3300026116 Unclassified 2757
108 Ga0207675_100095639 3300026118 Bacteria 2795
109 Ga0207683_10000577 3300026121 Bacteria 33955
110 Ga0207683_10071701 3300026121 Bacteria 3063
111 Ga0207428_10004669 3300027907 Bacteria 12980
112 Ga0207428_10033252 3300027907 Bacteria 4237
113 Ga0265320_10015516 3300031240 Bacteria 4304
114 Ga0316576_10029306 3300031727 Bacteria 3889
115 Ga0307413_10026050 3300031824 Bacteria 3217
116 Ga0316582_0087955 3300036647 Bacteria 2040
117 Ga0316584_0063905 3300036712 Bacteria 2756
118 Ga0395899_0034421 3300037312 Bacteria 3804
119 Ga0395900_0003425 3300037418 Bacteria 17146
120 Ga0395900_0012583 3300037418 Bacteria 8658
121 Ga0395900_0038103 3300037418 Bacteria 4956
122 Ga0395898_0003331 3300037466 Bacteria 18044
123 Ga0395898_0006174 3300037466 Bacteria 12834
124 Ga0395898_0006295 3300037466 Bacteria 12688
125 Ga0395905_0005677 3300037471 Bacteria 12687
126 Ga0395905_0017969 3300037471 Bacteria 6714
127 Ga0395905_0147834 3300037471 Bacteria 2211
128 Ga0395901_0005439 3300038443 Bacteria 12891
129 Ga0395901_0007440 3300038443 Bacteria 11052
130 Ga0395901_0010998 3300038443 Bacteria 9167
131 Ga0395901_0013670 3300038443 Bacteria 8249
132 Ga0395901_0030063 3300038443 Bacteria 5595
133 Ga0450906_002287 3300042145 Bacteria 4194
134 Ga0439458_0005145 3300042157 Bacteria 2949
135 Ga0451577_0152417 3300042876 Bacteria 2080
136 Ga0453683_0005157 3300044673 Bacteria 9153
137 Ga0453683_0018235 3300044673 Bacteria 4507
138 Ga0453684_0025395 3300044712 Bacteria 8605
139 Ga0453684_0084269 3300044712 Bacteria 3954
140 Ga0451576_0005964 3300045051 Bacteria 15089
141 Ga0495641_0017685 3300046461 Bacteria 3704
142 Ga0495608_0086913 3300046511 Bacteria 2026
143 Ga0495635_0045651 3300046663 Bacteria 3023
144 Ga0495647_0014137 3300046681 Bacteria 2777
145 Ga0495589_0016721 3300046794 Bacteria 3768
146 Ga0495581_0008897 3300047315 Bacteria 5814
147 Ga0495676_0021838 3300047321 Bacteria 5580
148 Ga0495680_0072955 3300047322 Bacteria 2610
149 Ga0496100_0001233 3300048903 Bacteria 12427
150 Ga0496100_0048621 3300048903 Bacteria 2739
151 Ga0496101_0016923 3300048904 Bacteria 4936
152 Ga0496101_0079474 3300048904 Bacteria 2421
153 Ga0496102_0000586 3300048905 Bacteria 38547
154 Ga0496102_0040952 3300048905 Bacteria 4193
155 Ga0496104_0015431 3300048907 Bacteria 6919
156 Ga0496104_0021288 3300048907 Bacteria 5951
157 Ga0496104_0156023 3300048907 Bacteria 2190
158 Ga0496105_0017443 3300048908 Bacteria 5757
159 Ga0496105_0028145 3300048908 Bacteria 4596
160 Ga0496106_0008705 3300048909 Bacteria 7509
161 Ga0496108_0006841 3300048911 Bacteria 9227
162 Ga0496108_0101504 3300048911 Bacteria 2454
163 Ga0496109_0006348 3300048912 Bacteria 9955
164 Ga0496109_0010237 3300048912 Bacteria 8009
165 Ga0496109_0143963 3300048912 Bacteria 2229
166 Ga0496109_0148230 3300048912 Bacteria 2196
167 Ga0496110_0003231 3300048913 Bacteria 12418
168 Ga0496110_0015578 3300048913 Bacteria 6332
169 Ga0496110_0161363 3300048913 Bacteria 2032
170 Ga0496111_0000866 3300048914 Bacteria 16401
171 Ga0496111_0000924 3300048914 Bacteria 16023
172 Ga0496111_0073358 3300048914 Bacteria 2492
173 Ga0496112_0037906 3300048915 Unclassified 4707
174 Ga0496112_0088998 3300048915 Bacteria 3055
175 Ga0496114_0008292 3300048917 Bacteria 8233
176 Ga0496114_0054308 3300048917 Bacteria 3341
177 Ga0496115_0002375 3300048918 Bacteria 13502
178 Ga0496115_0055392 3300048918 Bacteria 3185
179 Ga0501032_0010852 3300049569 Bacteria 6554
180 Ga0501033_0024532 3300049570 Bacteria 4549
181 Ga0501036_0010566 3300049572 Bacteria 7626
182 Ga0501039_0008782 3300049575 Bacteria 7699
183 Ga0501039_0033440 3300049575 Bacteria 3964
184 Ga0501039_0033693 3300049575 Bacteria 3950
185 Ga0501040_0016115 3300049576 Bacteria 4942
186 Ga0501042_0023727 3300049578 Bacteria 4296
187 Ga0501043_0037194 3300049579 Bacteria 3829
188 Ga0501046_0013196 3300049580 Bacteria 7007
189 Ga0501046_0014705 3300049580 Bacteria 6590
190 Ga0501046_0044103 3300049580 Bacteria 3547
191 Ga0501067_0008559 3300049583 Bacteria 5676
192 Ga0501068_0048185 3300049584 Bacteria 2572
193 Ga0501069_0045964 3300049585 Bacteria 2420
194 Ga0501069_0058425 3300049585 Bacteria 2151
195 Ga0501070_0007893 3300049586 Bacteria 9017
196 Ga0501070_0023148 3300049586 Bacteria 5204
197 Ga0501071_0032480 3300049587 Bacteria 3706
198 Ga0501071_0093397 3300049587 Bacteria 2212
199 Ga0501073_0050829 3300049589 Bacteria 2904
200 Ga0501074_0028070 3300049590 Bacteria 4079
201 Ga0501074_0044177 3300049590 Bacteria 3226
202 Ga0501075_0002307 3300049591 Bacteria 12663
203 Ga0501075_0004344 3300049591 Bacteria 9589
204 Ga0501075_0023652 3300049591 Bacteria 4500
205 Ga0501076_0020285 3300049592 Bacteria 5087
206 Ga0501076_0029184 3300049592 Bacteria 4288
207 Ga0501077_0002969 3300049593 Bacteria 10174
208 Ga0501077_0008334 3300049593 Bacteria 6414
209 Ga0501079_0003786 3300049741 Bacteria 11172
210 Ga0501079_0010846 3300049741 Bacteria 6940
211 Ga0501080_0005363 3300049742 Bacteria 11430
212 Ga0501080_0015593 3300049742 Bacteria 7009
213 Ga0501081_0008602 3300049743 Bacteria 6634
214 Ga0501081_0082405 3300049743 Bacteria 2253
215 Ga0501083_0002616 3300049744 Bacteria 12401
216 Ga0501083_0028504 3300049744 Bacteria 3847
217 Ga0501035_0073725 3300049822 Bacteria 3020
218 Ga0501045_0007107 3300049824 Bacteria 7763
219 Ga0501045_0031289 3300049824 Bacteria 3854
220 Ga0501045_0036807 3300049824 Bacteria 3554
221 nmdc:mga06r32_36270_c1 3300050510 Bacteria 4658
222 nmdc:mga06r32_781_c1 3300050510 Bacteria 26964
223 nmdc:mga08y16_120742_c1 3300050511 Unclassified 2727
224 nmdc:mga08y16_16889_c1 3300050511 Bacteria 7686
225 nmdc:mga08y16_19553_c1 3300050511 Bacteria 7140
226 nmdc:mga08y16_4452_c1 3300050511 Bacteria 14643
227 nmdc:mga0rr50_12162_c1 3300050513 Bacteria 5548
228 nmdc:mga0a205_24458_c1 3300050515 Bacteria 5745
229 Ga0495601_0144091 3300053077 Bacteria 1555
230 Ga0500616_0000052 3300053153 Bacteria 295313
231 Ga0501084_0024619 3300054114 Bacteria 5023
232 Ga0501082_0013662 3300060353 Bacteria 6979
233 Ga0530510_0039918 3300061734 Bacteria 3387
234 Ga0530510_0065839 3300061734 Bacteria 2626
235 Ga0501075_0057640
236 JGI24744J21845_10002892
237 Ga0065704_10005583
238 Ga0065707_10002623
239 Ga0070683_100007814
240 Ga0070683_100011043
241 Ga0070683_100031032
242 Ga0070670_100001396
243 Ga0070680_100042466
244 Ga0070680_100062214
245 Ga0070660_100016054
246 Ga0070674_100004027
247 Ga0070674_100015525
248 Ga0070688_100009996
249 Ga0070659_100037930
250 Ga0070659_100073432
251 Ga0070713_100076905
252 Ga0070700_100000807
253 Ga0070700_100023283
254 Ga0070678_100107379
255 Ga0070681_10040023
256 Ga0068867_100000715
257 Ga0070706_100004396
258 Ga0070706_100173916
259 Ga0070707_100000740
260 Ga0070698_100005271
261 Ga0070699_100005792
262 Ga0070699_100008706
263 Ga0070679_100003075
264 Ga0070684_100043071
265 Ga0070686_100007292
266 Ga0070696_100002523
267 Ga0070696_100015803
268 Ga0070696_100019397
269 Ga0070704_100003858
270 Ga0070704_100023316
271 Ga0070664_100027043
272 Ga0068856_100026450
273 Ga0068856_100045326
274 Ga0070702_100002975
275 Ga0070702_100008503
276 Ga0070702_100021095
277 Ga0068866_10002082
278 Ga0068866_10030721
279 Ga0068861_100058549
280 Ga0068861_100094502
281 Ga0068870_10008869
282 Ga0081455_10035453
283 Ga0081539_10001615
284 Ga0075365_10025461
285 Ga0075365_10036055
286 Ga0075364_10004993
287 Ga0075428_100009004
288 Ga0075431_100001319
289 Ga0075433_10037222
290 Ga0068865_100000203
291 Ga0111539_10005437
292 Ga0111539_10025805
293 Ga0111539_10194879
294 Ga0105245_10003975
295 Ga0105245_10011913
296 Ga0105245_10069007
297 Ga0114129_10022482
298 Ga0114129_10031788
299 Ga0105243_10000600
300 Ga0105243_10014222
301 Ga0105249_10001010
302 Ga0105239_10002392
303 Ga0105246_10004180
304 Ga0157369_10086362
305 Ga0157374_10048163
306 Ga0163162_10017272
307 Ga0157372_10040509
308 Ga0157372_10052511
309 Ga0157375_10012493
310 Ga0157375_10015011
311 Ga0157375_10021837
312 Ga0163163_10141778
313 Ga0163163_10143485
314 Ga0157380_10007384
315 Ga0157380_10018255
316 Ga0157376_10074986
317 Ga0157376_10082118
318 Ga0207692_10009989
319 Ga0207688_10002151
320 Ga0207688_10018174
321 Ga0207707_10043594
322 Ga0207693_10014173
323 Ga0207693_10035530
324 Ga0207646_10004376
325 Ga0207650_10006231
326 Ga0207650_10016287
327 Ga0207687_10032084
328 Ga0207700_10027808
329 Ga0207644_10065798
330 Ga0207709_10000563
331 Ga0207669_10003419
332 Ga0207704_10000527
333 Ga0207661_10000308
334 Ga0207668_10034832
335 Ga0207703_10023639
336 Ga0207708_10002310
337 Ga0207708_10006294
338 Ga0207702_10016335
339 Ga0207648_10005854
340 Ga0207648_10048724
341 Ga0207674_10108154
342 Ga0207675_100095639
343 Ga0207683_10000577
344 Ga0207683_10071701
345 Ga0207428_10004669
346 Ga0207428_10033252
347 Ga0265320_10015516
348 Ga0316576_10029306
349 Ga0307413_10026050
350 Ga0316582_0087955
351 Ga0316584_0063905
352 Ga0395899_0034421
353 Ga0395900_0003425
354 Ga0395900_0012583
355 Ga0395900_0038103
356 Ga0395898_0003331
357 Ga0395898_0006174
358 Ga0395898_0006295
359 Ga0395905_0005677
360 Ga0395905_0017969
361 Ga0395905_0147834
362 Ga0395901_0005439
363 Ga0395901_0007440
364 Ga0395901_0010998
365 Ga0395901_0013670
366 Ga0395901_0030063
367 Ga0450906_002287
368 Ga0439458_0005145
369 Ga0451577_0152417
370 Ga0453683_0005157
371 Ga0453683_0018235
372 Ga0453684_0025395
373 Ga0453684_0084269
374 Ga0451576_0005964
375 Ga0495641_0017685
376 Ga0495608_0086913
377 Ga0495635_0045651
378 Ga0495647_0014137
379 Ga0495589_0016721
380 Ga0495581_0008897
381 Ga0495676_0021838
382 Ga0495680_0072955
383 Ga0496100_0001233
384 Ga0496100_0048621
385 Ga0496101_0016923
386 Ga0496101_0079474
387 Ga0496102_0000586
388 Ga0496102_0040952
389 Ga0496104_0015431
390 Ga0496104_0021288
391 Ga0496104_0156023
392 Ga0496105_0017443
393 Ga0496105_0028145
394 Ga0496106_0008705
395 Ga0496108_0006841
396 Ga0496108_0101504
397 Ga0496109_0006348
398 Ga0496109_0010237
399 Ga0496109_0143963
400 Ga0496109_0148230
401 Ga0496110_0003231
402 Ga0496110_0015578
403 Ga0496110_0161363
404 Ga0496111_0000866
405 Ga0496111_0000924
406 Ga0496111_0073358
407 Ga0496112_0037906
408 Ga0496112_0088998
409 Ga0496114_0008292
410 Ga0496114_0054308
411 Ga0496115_0002375
412 Ga0496115_0055392
413 Ga0501032_0010852
414 Ga0501033_0024532
415 Ga0501036_0010566
416 Ga0501039_0008782
417 Ga0501039_0033440
418 Ga0501039_0033693
419 Ga0501040_0016115
420 Ga0501042_0023727
421 Ga0501043_0037194
422 Ga0501046_0013196
423 Ga0501046_0014705
424 Ga0501046_0044103
425 Ga0501067_0008559
426 Ga0501068_0048185
427 Ga0501069_0045964
428 Ga0501069_0058425
429 Ga0501070_0007893
430 Ga0501070_0023148
431 Ga0501071_0032480
432 Ga0501071_0093397
433 Ga0501073_0050829
434 Ga0501074_0028070
435 Ga0501074_0044177
436 Ga0501075_0002307
437 Ga0501075_0004344
438 Ga0501075_0023652
439 Ga0501076_0020285
440 Ga0501076_0029184
441 Ga0501077_0002969
442 Ga0501077_0008334
443 Ga0501079_0003786
444 Ga0501079_0010846
445 Ga0501080_0005363
446 Ga0501080_0015593
447 Ga0501081_0008602
448 Ga0501081_0082405
449 Ga0501083_0002616
450 Ga0501083_0028504
451 Ga0501035_0073725
452 Ga0501045_0007107
453 Ga0501045_0031289
454 Ga0501045_0036807
455 nmdc:mga06r32_36270_c1
456 nmdc:mga06r32_781_c1
457 nmdc:mga08y16_120742_c1
458 nmdc:mga08y16_16889_c1
459 nmdc:mga08y16_19553_c1
460 nmdc:mga08y16_4452_c1
461 nmdc:mga0rr50_12162_c1
462 nmdc:mga0a205_24458_c1
463 Ga0495601_0144091
464 Ga0500616_0000052
465 Ga0501084_0024619
466 Ga0501082_0013662
467 Ga0530510_0039918
468 Ga0530510_0065839

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02779

Transket_pyr

Transketolase, pyrimidine binding domain

360

519

0.96

PF00456

Transketolase_N

Transketolase, thiamine diphosphate binding domain

41

287

0.91

PF02780

Transketolase_C

Transketolase, C-terminal domain

536

649

0.89

PF13292

DXP_synthase_N

1-deoxy-D-xylulose-5-phosphate synthase

32

229

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
6yak-assembly1.cif.gz_CCC split gene transketolase, active alpha2beta2 heterotetramer 0.9182 13 299
6yak-assembly1.cif.gz_DDD split gene transketolase, active alpha2beta2 heterotetramer 0.916 329 634
6yak-assembly1.cif.gz_CCC split gene transketolase, active alpha2beta2 heterotetramer 0.9057 13 299
6yaj-assembly1.cif.gz_AAA split gene transketolase, inactive beta4 tetramer 0.8998 331 634
6yak-assembly1.cif.gz_DDD split gene transketolase, active alpha2beta2 heterotetramer 0.8994 329 634
ID Description Score Start End Superfamily
af_Q58094_1_274_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9471 18 290 3.40.50.970
af_A0A1D6GTY5_25_137_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9331 129 190 3.40.50.970
af_Q58094_1_274_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9134 18 290 3.40.50.970
af_I1M1A4_399_568_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9116 331 490 3.40.50.970
af_Q58092_3_181_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9093 325 499 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A456VQQ2-F1-model_v4 deleted 0.9516 18 261
AF-A0A554S8F4-F1-model_v4 Transketolase 0.9511 34 291 GO:0000287
AF-I9LHR5-F1-model_v4 Transketolase domain-containing protein 0.9507 18 292
AF-A0A7C0W2C2-F1-model_v4 Transketolase 0.9504 84 289
AF-A0A3D5AVK5-F1-model_v4 Transketolase 0.9496 50 212

Map