F347482
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 234 | 133 | 218 | 428 |
Family's Representative Sequence
| Representative Sequence | 3300048928|Ga0496125_0067816|Ga0496125_0067816_775_2064 |
| Length | 394 |
| Sequence | MLKKYDYKTLGKTEIQQLVARNTDPNNAIQQGDIVLREYAAKFDKVELDRLYLDEEDIDALASTIDRDQQRALEIAFQNIHKFHSTQLKRERTVETMPGVKCWREVRPIEKVGLYIPGGSAVLPSTLLMLGIPARIAGCKEIVVCSPPQSNGKINGFVAFCLKLLKINRIYLVGGAQAVAAMGFGTETIPKVDKIFGPGNQFVTKAKSIIQGLENVSIDMPAGPSEVLVIADESANAAFVAADLLAQAEHGADSQVLPRKELAAKAIENSYAITVENLREAIQFSNDYAPEHLILETDQWESLTRYISNAGSVFLGHLTPESAGDYASGTNHTLPTSGYARSYSGVSVDSFVKKVTFQHISETGLQQIGSVVEILAELEGLQAHKNAISIRKKG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 2 | 2599185184 | Mucilaginibacter sp. NFR10 | Isolate | Rhizoplane |
| 3 | 2721755487 | Sphingobacterium sp. B29 | Isolate | Rhizosphere |
| 4 | 2842903701 | Olivibacter sp. R-72191 | Isolate | Unclassified |
| 5 | 2852623160 | Mucilaginibacter sp. AK015 | Isolate | Rhizosphere |
| 6 | 2884933994 | Mucilaginibacter sp. 14171R-50 | Isolate | Rhizosphere |
| 7 | 2890737413 | Parapedobacter sp. SGR-10 | Isolate | Rhizosphere |
| 8 | 2896317667 | Sphingobacterium sp. SGR-19 | Isolate | Rhizosphere |
| 9 | 2898713307 | Sphingobacterium sp. SGG-5 | Isolate | Rhizosphere |
| 10 | 2904780799 | Sphingobacterium sp. 1304 | Isolate | Rhizosphere |
| 11 | 2919177583 | Sphingobacterium sp. 2149 | Isolate | Rhizosphere |
| 12 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 13 | 2928078545 | Mucilaginibacter rubeus 1215 | Isolate | Unclassified |
| 14 | 2928147474 | Mucilaginibacter rubeus 2025 | Isolate | Unclassified |
| 15 | 2932082852 | Mucilaginibacter sp. 3215 | Isolate | Rhizosphere |
| 16 | 2977232053 | Mucilaginibacter terrae SORGH_AS 422 | Isolate | Unclassified |
| 17 | 3003233435 | Sphingobacterium shayense CrR18 | Isolate | Unclassified |
| 18 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 19 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 20 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 21 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 22 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 23 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 24 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 25 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 26 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 29 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 36 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 37 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 38 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 40 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 41 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 42 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 43 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 44 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 46 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 47 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 91 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 92 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 93 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 94 | 3300030742 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 | Metagenome | Rhizosphere |
| 95 | 3300030744 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 | Metagenome | Rhizosphere |
| 96 | 3300030745 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 | Metagenome | Rhizosphere |
| 97 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 98 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 99 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 100 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 101 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 102 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 103 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 104 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 105 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 106 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 107 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 108 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 109 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 110 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 111 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 112 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 126 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 128 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 129 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 130 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 131 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 132 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 133 | 3300053157 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.16 |
| Metatranscriptomes | 0 |
| Isolates | 6.84 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.83 |
| Nodule | 0 |
| Rhizoplane | 0.43 |
| Rhizosphere | 82.48 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 7.26 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL2b_contig_2453040 | 2162886007 | Bacteria | 2647 |
| 2 | JGI24737J22298_10017000 | 3300001990 | Bacteria | 2345 |
| 3 | JGI25162J39368_1000011 | 3300002737 | Bacteria | 379156 |
| 4 | JGI25162J39368_1000614 | 3300002737 | Bacteria | 25616 |
| 5 | JGI25165J46597_1000985 | 3300003214 | Bacteria | 19074 |
| 6 | rootH1_10024829 | 3300003316 | Bacteria | 25564 |
| 7 | rootH2_10001891 | 3300003320 | Bacteria | 464318 |
| 8 | rootH2_10090920 | 3300003320 | Bacteria | 6366 |
| 9 | rootH2_10271559 | 3300003320 | Bacteria | 2722 |
| 10 | rootH1_10008801 | 3300003323 | Bacteria | 13652 |
| 11 | rootH1_10129092 | 3300003323 | Bacteria | 3778 |
| 12 | rootH1_10143972 | 3300003323 | Bacteria | 2117 |
| 13 | Ga0065714_10089352 | 3300005288 | Bacteria | 1983 |
| 14 | Ga0065704_10002795 | 3300005289 | Bacteria | 5198 |
| 15 | Ga0070658_10000049 | 3300005327 | Bacteria | 119985 |
| 16 | Ga0070658_10082313 | 3300005327 | Bacteria | 2645 |
| 17 | Ga0070658_10147546 | 3300005327 | Bacteria | 1968 |
| 18 | Ga0070676_10000563 | 3300005328 | Bacteria | 17973 |
| 19 | Ga0070680_100138216 | 3300005336 | Bacteria | 2042 |
| 20 | Ga0070671_100035795 | 3300005355 | Bacteria | 4114 |
| 21 | Ga0070673_100035251 | 3300005364 | Bacteria | 3793 |
| 22 | Ga0070659_100006699 | 3300005366 | Bacteria | 8329 |
| 23 | Ga0070659_100062983 | 3300005366 | Bacteria | 2933 |
| 24 | Ga0070663_100001195 | 3300005455 | Bacteria | 14271 |
| 25 | Ga0070678_100001813 | 3300005456 | Bacteria | 11512 |
| 26 | Ga0070662_100000045 | 3300005457 | Bacteria | 67900 |
| 27 | Ga0070681_10029551 | 3300005458 | Bacteria | 5504 |
| 28 | Ga0070679_100008873 | 3300005530 | Bacteria | 9490 |
| 29 | Ga0068853_100008667 | 3300005539 | Bacteria | 8178 |
| 30 | Ga0068853_100022472 | 3300005539 | Bacteria | 5268 |
| 31 | Ga0070665_100000020 | 3300005548 | Bacteria | 389687 |
| 32 | Ga0068855_100000240 | 3300005563 | Bacteria | 69408 |
| 33 | Ga0068855_100005837 | 3300005563 | Bacteria | 15028 |
| 34 | Ga0068855_100008169 | 3300005563 | Bacteria | 12653 |
| 35 | Ga0068855_100022866 | 3300005563 | Bacteria | 7493 |
| 36 | Ga0068856_100000835 | 3300005614 | Bacteria | 33215 |
| 37 | Ga0068856_100041561 | 3300005614 | Bacteria | 4519 |
| 38 | Ga0068856_100072662 | 3300005614 | Bacteria | 3405 |
| 39 | Ga0068856_100098300 | 3300005614 | Bacteria | 2917 |
| 40 | Ga0068852_100011468 | 3300005616 | Bacteria | 6674 |
| 41 | Ga0068866_10011575 | 3300005718 | Bacteria | 3821 |
| 42 | Ga0075366_10003194 | 3300006195 | Bacteria | 8594 |
| 43 | Ga0075366_10005218 | 3300006195 | Bacteria | 7031 |
| 44 | Ga0075366_10006027 | 3300006195 | Bacteria | 6604 |
| 45 | Ga0097621_100002086 | 3300006237 | Bacteria | 13691 |
| 46 | Ga0068871_100000100 | 3300006358 | Bacteria | 51253 |
| 47 | Ga0068865_100000174 | 3300006881 | Bacteria | 35630 |
| 48 | Ga0105240_10000237 | 3300009093 | Bacteria | 109895 |
| 49 | Ga0105240_10001351 | 3300009093 | Bacteria | 42091 |
| 50 | Ga0105240_10008151 | 3300009093 | Bacteria | 15026 |
| 51 | Ga0105240_10096280 | 3300009093 | Bacteria | 3607 |
| 52 | Ga0105240_10096537 | 3300009093 | Bacteria | 3602 |
| 53 | Ga0105240_10126815 | 3300009093 | Bacteria | 3066 |
| 54 | Ga0105240_10139567 | 3300009093 | Bacteria | 2899 |
| 55 | Ga0105240_10315975 | 3300009093 | Bacteria | 1782 |
| 56 | Ga0105243_10000025 | 3300009148 | Bacteria | 193732 |
| 57 | Ga0105241_10000086 | 3300009174 | Bacteria | 69935 |
| 58 | Ga0105241_10005221 | 3300009174 | Bacteria | 9592 |
| 59 | Ga0105241_10190775 | 3300009174 | Bacteria | 1706 |
| 60 | Ga0105242_10066597 | 3300009176 | Bacteria | 2975 |
| 61 | Ga0105237_10000224 | 3300009545 | Bacteria | 79854 |
| 62 | Ga0105237_10003647 | 3300009545 | Bacteria | 18154 |
| 63 | Ga0105237_10004072 | 3300009545 | Bacteria | 17045 |
| 64 | Ga0105237_10057618 | 3300009545 | Bacteria | 3887 |
| 65 | Ga0105237_10059488 | 3300009545 | Bacteria | 3822 |
| 66 | Ga0105238_10385111 | 3300009551 | Bacteria | 1394 |
| 67 | Ga0105239_10000002 | 3300010375 | Bacteria | 610298 |
| 68 | Ga0105239_10000758 | 3300010375 | Bacteria | 45640 |
| 69 | Ga0105239_10001789 | 3300010375 | Bacteria | 28284 |
| 70 | Ga0105239_10005094 | 3300010375 | Bacteria | 15518 |
| 71 | Ga0105239_10023308 | 3300010375 | Bacteria | 6819 |
| 72 | Ga0105239_10024710 | 3300010375 | Bacteria | 6618 |
| 73 | Ga0157373_10002581 | 3300013100 | Bacteria | 13752 |
| 74 | Ga0157373_10020933 | 3300013100 | Bacteria | 4749 |
| 75 | Ga0157373_10045218 | 3300013100 | Bacteria | 3143 |
| 76 | Ga0157371_10000135 | 3300013102 | Bacteria | 107607 |
| 77 | Ga0157371_10018424 | 3300013102 | Bacteria | 5163 |
| 78 | Ga0157371_10064378 | 3300013102 | Bacteria | 2598 |
| 79 | Ga0157370_10109014 | 3300013104 | Bacteria | 2589 |
| 80 | Ga0157370_10141008 | 3300013104 | Bacteria | 2246 |
| 81 | Ga0157370_10266337 | 3300013104 | Bacteria | 1583 |
| 82 | Ga0157369_10000475 | 3300013105 | Bacteria | 53219 |
| 83 | Ga0157369_10048946 | 3300013105 | Bacteria | 4584 |
| 84 | Ga0157369_10052743 | 3300013105 | Bacteria | 4398 |
| 85 | Ga0157369_10232993 | 3300013105 | Bacteria | 1925 |
| 86 | Ga0157374_10000128 | 3300013296 | Bacteria | 69753 |
| 87 | Ga0157374_10000202 | 3300013296 | Bacteria | 54739 |
| 88 | Ga0157378_10005717 | 3300013297 | Bacteria | 10884 |
| 89 | Ga0157378_10005849 | 3300013297 | Bacteria | 10778 |
| 90 | Ga0157378_10063905 | 3300013297 | Bacteria | 3290 |
| 91 | Ga0163162_10000032 | 3300013306 | Bacteria | 156609 |
| 92 | Ga0163162_10029333 | 3300013306 | Bacteria | 5444 |
| 93 | Ga0157372_10000017 | 3300013307 | Bacteria | 219543 |
| 94 | Ga0157372_10000061 | 3300013307 | Bacteria | 119814 |
| 95 | Ga0157372_10003385 | 3300013307 | Bacteria | 17204 |
| 96 | Ga0157372_10108752 | 3300013307 | Bacteria | 3174 |
| 97 | Ga0157375_10037080 | 3300013308 | Bacteria | 4668 |
| 98 | Ga0157375_10175840 | 3300013308 | Bacteria | 2290 |
| 99 | Ga0207427_100103 | 3300025231 | Bacteria | 119618 |
| 100 | Ga0209437_100017 | 3300025233 | Bacteria | 694471 |
| 101 | Ga0209437_100101 | 3300025233 | Bacteria | 226668 |
| 102 | Ga0209233_1000124 | 3300025261 | Bacteria | 226743 |
| 103 | Ga0209233_1001699 | 3300025261 | Bacteria | 8516 |
| 104 | Ga0209233_1021506 | 3300025261 | Bacteria | 1668 |
| 105 | Ga0209455_1006769 | 3300025272 | Bacteria | 3340 |
| 106 | Ga0207642_10012988 | 3300025899 | Bacteria | 3024 |
| 107 | Ga0207647_10000105 | 3300025904 | Bacteria | 65502 |
| 108 | Ga0207647_10000511 | 3300025904 | Bacteria | 30935 |
| 109 | Ga0207645_10001210 | 3300025907 | Bacteria | 21312 |
| 110 | Ga0207705_10000079 | 3300025909 | Bacteria | 119999 |
| 111 | Ga0207705_10071629 | 3300025909 | Bacteria | 2513 |
| 112 | Ga0207705_10179648 | 3300025909 | Bacteria | 1597 |
| 113 | Ga0207654_10007482 | 3300025911 | Bacteria | 5502 |
| 114 | Ga0207654_10043271 | 3300025911 | Bacteria | 2552 |
| 115 | Ga0207695_10000013 | 3300025913 | Bacteria | 821265 |
| 116 | Ga0207695_10001232 | 3300025913 | Bacteria | 43800 |
| 117 | Ga0207695_10004447 | 3300025913 | Bacteria | 19105 |
| 118 | Ga0207695_10009118 | 3300025913 | Bacteria | 12316 |
| 119 | Ga0207695_10109683 | 3300025913 | Bacteria | 2741 |
| 120 | Ga0207695_10157719 | 3300025913 | Bacteria | 2203 |
| 121 | Ga0207695_10251021 | 3300025913 | Bacteria | 1668 |
| 122 | Ga0207671_10000272 | 3300025914 | Bacteria | 77080 |
| 123 | Ga0207671_10005889 | 3300025914 | Bacteria | 11125 |
| 124 | Ga0207671_10009491 | 3300025914 | Bacteria | 8127 |
| 125 | Ga0207671_10014622 | 3300025914 | Bacteria | 6192 |
| 126 | Ga0207671_10036318 | 3300025914 | Bacteria | 3654 |
| 127 | Ga0207660_10098388 | 3300025917 | Bacteria | 2182 |
| 128 | Ga0207657_10092860 | 3300025919 | Bacteria | 2514 |
| 129 | Ga0207652_10014179 | 3300025921 | Bacteria | 6454 |
| 130 | Ga0207644_10005149 | 3300025931 | Bacteria | 8543 |
| 131 | Ga0207690_10000318 | 3300025932 | Bacteria | 32496 |
| 132 | Ga0207690_10042336 | 3300025932 | Bacteria | 2990 |
| 133 | Ga0207706_10000120 | 3300025933 | Bacteria | 84222 |
| 134 | Ga0207709_10000003 | 3300025935 | Bacteria | 1050072 |
| 135 | Ga0207704_10000099 | 3300025938 | Bacteria | 48088 |
| 136 | Ga0207667_10000037 | 3300025949 | Bacteria | 297252 |
| 137 | Ga0207667_10007957 | 3300025949 | Bacteria | 12648 |
| 138 | Ga0207667_10028059 | 3300025949 | Bacteria | 6116 |
| 139 | Ga0207651_10005116 | 3300025960 | Bacteria | 6696 |
| 140 | Ga0207677_10082921 | 3300026023 | Bacteria | 2306 |
| 141 | Ga0207639_10016182 | 3300026041 | Bacteria | 5271 |
| 142 | Ga0207639_10185337 | 3300026041 | Bacteria | 1774 |
| 143 | Ga0207678_10038074 | 3300026067 | Bacteria | 4181 |
| 144 | Ga0207702_10000196 | 3300026078 | Bacteria | 71703 |
| 145 | Ga0207702_10107228 | 3300026078 | Bacteria | 2477 |
| 146 | Ga0207683_10003712 | 3300026121 | Bacteria | 13255 |
| 147 | Ga0268266_10000018 | 3300028379 | Bacteria | 569141 |
| 148 | Ga0268266_10253680 | 3300028379 | Bacteria | 1628 |
| 149 | Ga0307517_10004683 | 3300028786 | Bacteria | 20955 |
| 150 | Ga0307515_10014453 | 3300028794 | Bacteria | 14631 |
| 151 | Ga0316177_1198244 | 3300030731 | Bacteria | 7343 |
| 152 | Ga0316176_1050137 | 3300030732 | Bacteria | 14004 |
| 153 | Ga0316183_1065995 | 3300030742 | Bacteria | 27909 |
| 154 | Ga0316181_1148726 | 3300030744 | Bacteria | 7875 |
| 155 | Ga0316182_1043318 | 3300030745 | Bacteria | 1636 |
| 156 | Ga0307408_100000611 | 3300031548 | Bacteria | 30550 |
| 157 | Ga0307408_100001373 | 3300031548 | Bacteria | 18154 |
| 158 | Ga0307412_10001456 | 3300031911 | Bacteria | 13169 |
| 159 | Ga0307416_100281374 | 3300032002 | Bacteria | 1640 |
| 160 | Ga0307414_10034651 | 3300032004 | Bacteria | 3350 |
| 161 | Ga0307414_10217982 | 3300032004 | Bacteria | 1564 |
| 162 | Ga0307411_10018268 | 3300032005 | Bacteria | 4018 |
| 163 | Ga0307507_10000064 | 3300033179 | Bacteria | 161226 |
| 164 | Ga0307510_10002860 | 3300033180 | Bacteria | 19841 |
| 165 | Ga0395899_0000033 | 3300037312 | Bacteria | 306589 |
| 166 | Ga0395899_0000493 | 3300037312 | Bacteria | 44066 |
| 167 | Ga0395899_0000629 | 3300037312 | Bacteria | 36706 |
| 168 | Ga0395899_0029721 | 3300037312 | Bacteria | 4111 |
| 169 | Ga0395900_0000480 | 3300037418 | Bacteria | 56578 |
| 170 | Ga0395900_0000506 | 3300037418 | Bacteria | 54890 |
| 171 | Ga0395900_0009920 | 3300037418 | Bacteria | 9750 |
| 172 | Ga0395898_0030967 | 3300037466 | Bacteria | 5349 |
| 173 | Ga0395898_0144891 | 3300037466 | Bacteria | 2274 |
| 174 | Ga0395905_0000738 | 3300037471 | Bacteria | 43061 |
| 175 | Ga0395905_0001166 | 3300037471 | Bacteria | 32800 |
| 176 | Ga0395901_0000853 | 3300038443 | Bacteria | 33521 |
| 177 | Ga0395901_0002096 | 3300038443 | Bacteria | 20476 |
| 178 | Ga0436361_0021149 | 3300039447 | Bacteria | 8615 |
| 179 | Ga0466961_0047453 | 3300044693 | Bacteria | 2746 |
| 180 | Ga0466958_0031614 | 3300045836 | Bacteria | 3147 |
| 181 | Ga0495650_0000087 | 3300046471 | Bacteria | 234870 |
| 182 | Ga0495650_0047997 | 3300046471 | Bacteria | 1782 |
| 183 | Ga0495606_0000052 | 3300046507 | Bacteria | 201529 |
| 184 | Ga0495606_0014847 | 3300046507 | Bacteria | 6048 |
| 185 | Ga0495606_0031877 | 3300046507 | Bacteria | 3659 |
| 186 | Ga0495610_0000903 | 3300046512 | Bacteria | 27607 |
| 187 | Ga0495616_0005196 | 3300046513 | Bacteria | 8053 |
| 188 | Ga0495616_0019186 | 3300046513 | Bacteria | 3735 |
| 189 | Ga0495609_0010327 | 3300046538 | Bacteria | 4483 |
| 190 | Ga0495633_0003064 | 3300046558 | Bacteria | 11374 |
| 191 | Ga0495668_0000012 | 3300046616 | Bacteria | 458817 |
| 192 | Ga0495625_0000036 | 3300046660 | Bacteria | 221680 |
| 193 | Ga0495625_0010136 | 3300046660 | Bacteria | 7829 |
| 194 | Ga0495625_0014574 | 3300046660 | Bacteria | 6267 |
| 195 | Ga0495625_0021139 | 3300046660 | Bacteria | 5014 |
| 196 | Ga0495625_0043637 | 3300046660 | Bacteria | 3251 |
| 197 | Ga0495625_0131252 | 3300046660 | Bacteria | 1697 |
| 198 | Ga0495661_0003611 | 3300046665 | Bacteria | 11391 |
| 199 | Ga0495661_0035887 | 3300046665 | Bacteria | 3108 |
| 200 | Ga0495661_0119352 | 3300046665 | Bacteria | 1458 |
| 201 | Ga0495671_0050664 | 3300046692 | Bacteria | 2067 |
| 202 | Ga0495649_0000017 | 3300046694 | Bacteria | 221685 |
| 203 | Ga0495687_024017 | 3300047443 | Bacteria | 2904 |
| 204 | Ga0495686_0000582 | 3300047472 | Bacteria | 51799 |
| 205 | Ga0495686_0005494 | 3300047472 | Bacteria | 9975 |
| 206 | Ga0495686_0038901 | 3300047472 | Bacteria | 3041 |
| 207 | Ga0496125_0067816 | 3300048928 | Bacteria | 2809 |
| 208 | Ga0495678_014851 | 3300049459 | Bacteria | 3607 |
| 209 | nmdc:mga0k408_3518_c1 | 3300050493 | Bacteria | 8279 |
| 210 | nmdc:mga0k408_821_c1 | 3300050493 | Bacteria | 17147 |
| 211 | nmdc:mga0k408_824_c1 | 3300050493 | Bacteria | 17116 |
| 212 | Ga0500635_0002671 | 3300053080 | Bacteria | 4424 |
| 213 | Ga0500608_002945 | 3300053122 | Bacteria | 6304 |
| 214 | Ga0500618_000002 | 3300053125 | Bacteria | 370822 |
| 215 | Ga0500618_026032 | 3300053125 | Bacteria | 1399 |
| 216 | Ga0500642_0006793 | 3300053130 | Bacteria | 3800 |
| 217 | Ga0500622_0004557 | 3300053156 | Bacteria | 8641 |
| 218 | Ga0500624_000271 | 3300053157 | Bacteria | 17926 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300025919 | Ga0207657_10092860 | Ga0207657_100928602 | 376 |
| 2 | 3300048928 | Ga0496125_0067816 | Ga0496125_0067816_775_2064 | 388 |
| 3 | 3300005327 | Ga0070658_10147546 | Ga0070658_101475462 | 408 |
| 4 | 3300025909 | Ga0207705_10179648 | Ga0207705_101796482 | 408 |
| 5 | 3300005336 | Ga0070680_100138216 | Ga0070680_1001382161 | 411 |
| 6 | 3300005458 | Ga0070681_10029551 | Ga0070681_100295512 | 411 |
| 7 | 3300005530 | Ga0070679_100008873 | Ga0070679_1000088733 | 411 |
| 8 | 3300025917 | Ga0207660_10098388 | Ga0207660_100983882 | 411 |
| 9 | 3300025921 | Ga0207652_10014179 | Ga0207652_100141796 | 411 |
| 10 | 3300047472 | Ga0495686_0038901 | Ga0495686_0038901_825_2111 | 413 |
| 11 | 3300009093 | Ga0105240_10126815 | Ga0105240_101268153 | 415 |
| 12 | 3300025913 | Ga0207695_10157719 | Ga0207695_101577191 | 415 |
| 13 | 3300009093 | Ga0105240_10139567 | Ga0105240_101395672 | 416 |
| 14 | 3300009551 | Ga0105238_10385111 | Ga0105238_103851111 | 416 |
| 15 | 3300013100 | Ga0157373_10020933 | Ga0157373_100209335 | 416 |
| 16 | 3300013102 | Ga0157371_10000135 | Ga0157371_1000013551 | 416 |
| 17 | 3300013104 | Ga0157370_10109014 | Ga0157370_101090142 | 416 |
| 18 | 3300013105 | Ga0157369_10052743 | Ga0157369_100527431 | 416 |
| 19 | 3300013306 | Ga0163162_10029333 | Ga0163162_100293332 | 416 |
| 20 | 3300013307 | Ga0157372_10000061 | Ga0157372_1000006140 | 416 |
| 21 | 3300025261 | Ga0209233_1001699 | Ga0209233_10016995 | 416 |
| 22 | 3300025904 | Ga0207647_10000105 | Ga0207647_1000010530 | 416 |
| 23 | 3300025913 | Ga0207695_10109683 | Ga0207695_101096832 | 416 |
| 24 | 3300046507 | Ga0495606_0014847 | Ga0495606_0014847_2020_3330 | 417 |
| 25 | 3300047472 | Ga0495686_0005494 | Ga0495686_0005494_7267_8553 | 418 |
| 26 | iso_pu_bacteria | 2599185184 | 2599478342 | 418 |
| 27 | iso_pu_bacteria | 2852623160 | 2852623165 | 418 |
| 28 | iso_pu_bacteria | 2884933994 | 2884937970 | 418 |
| 29 | iso_pu_bacteria | 2890737413 | 2890741128 | 418 |
| 30 | iso_pu_bacteria | 2896317667 | 2896317670 | 418 |
| 31 | iso_pu_bacteria | 2919437846 | 2919440794 | 418 |
| 32 | iso_pu_bacteria | 2928078545 | 2928080608 | 418 |
| 33 | iso_pu_bacteria | 2928147474 | 2928150833 | 418 |
| 34 | iso_pu_bacteria | 2932082852 | 2932083007 | 418 |
| 35 | iso_pu_bacteria | 3003233435 | 3003236444 | 418 |
| 36 | iso_pu_bacteria | 2721755487 | 2722729391 | 419 |
| 37 | iso_pu_bacteria | 2842903701 | 2842908877 | 419 |
| 38 | iso_pu_bacteria | 2898713307 | 2898715571 | 419 |
| 39 | iso_pu_bacteria | 2904780799 | 2904781050 | 419 |
| 40 | iso_pu_bacteria | 2919177583 | 2919180487 | 419 |
| 41 | iso_pu_bacteria | 2977232053 | 2977232531 | 419 |
| 42 | 3300013104 | Ga0157370_10141008 | Ga0157370_101410082 | 420 |
| 43 | 3300046660 | Ga0495625_0010136 | Ga0495625_0010136_2537_3817 | 421 |
| 44 | 3300001990 | JGI24737J22298_10017000 | JGI24737J22298_100170001 | 422 |
| 45 | 3300002737 | JGI25162J39368_1000011 | JGI25162J39368_1000011116 | 422 |
| 46 | 3300002737 | JGI25162J39368_1000614 | JGI25162J39368_10006146 | 422 |
| 47 | 3300003214 | JGI25165J46597_1000985 | JGI25165J46597_10009858 | 422 |
| 48 | 3300003316 | rootH1_10024829 | rootH1_1002482916 | 422 |
| 49 | 3300003320 | rootH2_10001891 | rootH2_10001891196 | 422 |
| 50 | 3300003320 | rootH2_10090920 | rootH2_100909202 | 422 |
| 51 | 3300003320 | rootH2_10271559 | rootH2_102715592 | 422 |
| 52 | 3300003323 | rootH1_10008801 | rootH1_1000880110 | 422 |
| 53 | 3300003323 | rootH1_10129092 | rootH1_101290922 | 422 |
| 54 | 3300003323 | rootH1_10143972 | rootH1_101439721 | 422 |
| 55 | 3300005288 | Ga0065714_10089352 | Ga0065714_100893522 | 422 |
| 56 | 3300005327 | Ga0070658_10000049 | Ga0070658_1000004920 | 422 |
| 57 | 3300005327 | Ga0070658_10082313 | Ga0070658_100823132 | 422 |
| 58 | 3300005328 | Ga0070676_10000563 | Ga0070676_1000056314 | 422 |
| 59 | 3300005355 | Ga0070671_100035795 | Ga0070671_1000357953 | 422 |
| 60 | 3300005364 | Ga0070673_100035251 | Ga0070673_1000352513 | 422 |
| 61 | 3300005366 | Ga0070659_100006699 | Ga0070659_1000066997 | 422 |
| 62 | 3300005366 | Ga0070659_100062983 | Ga0070659_1000629832 | 422 |
| 63 | 3300005455 | Ga0070663_100001195 | Ga0070663_10000119510 | 422 |
| 64 | 3300005456 | Ga0070678_100001813 | Ga0070678_1000018136 | 422 |
| 65 | 3300005457 | Ga0070662_100000045 | Ga0070662_10000004527 | 422 |
| 66 | 3300005539 | Ga0068853_100008667 | Ga0068853_1000086675 | 422 |
| 67 | 3300005539 | Ga0068853_100022472 | Ga0068853_1000224723 | 422 |
| 68 | 3300005548 | Ga0070665_100000020 | Ga0070665_100000020205 | 422 |
| 69 | 3300005563 | Ga0068855_100000240 | Ga0068855_1000002405 | 422 |
| 70 | 3300005563 | Ga0068855_100005837 | Ga0068855_1000058379 | 422 |
| 71 | 3300005563 | Ga0068855_100008169 | Ga0068855_1000081699 | 422 |
| 72 | 3300005614 | Ga0068856_100000835 | Ga0068856_10000083518 | 422 |
| 73 | 3300005614 | Ga0068856_100041561 | Ga0068856_1000415613 | 422 |
| 74 | 3300005614 | Ga0068856_100072662 | Ga0068856_1000726623 | 422 |
| 75 | 3300005614 | Ga0068856_100098300 | Ga0068856_1000983002 | 422 |
| 76 | 3300005616 | Ga0068852_100011468 | Ga0068852_1000114681 | 422 |
| 77 | 3300005718 | Ga0068866_10011575 | Ga0068866_100115753 | 422 |
| 78 | 3300006195 | Ga0075366_10003194 | Ga0075366_100031941 | 422 |
| 79 | 3300006195 | Ga0075366_10005218 | Ga0075366_100052187 | 422 |
| 80 | 3300006195 | Ga0075366_10006027 | Ga0075366_100060275 | 422 |
| 81 | 3300006237 | Ga0097621_100002086 | Ga0097621_1000020863 | 422 |
| 82 | 3300006358 | Ga0068871_100000100 | Ga0068871_10000010023 | 422 |
| 83 | 3300006881 | Ga0068865_100000174 | Ga0068865_1000001746 | 422 |
| 84 | 3300009093 | Ga0105240_10001351 | Ga0105240_1000135123 | 422 |
| 85 | 3300009093 | Ga0105240_10008151 | Ga0105240_100081512 | 422 |
| 86 | 3300009093 | Ga0105240_10096280 | Ga0105240_100962802 | 422 |
| 87 | 3300009093 | Ga0105240_10096537 | Ga0105240_100965373 | 422 |
| 88 | 3300009093 | Ga0105240_10315975 | Ga0105240_103159752 | 422 |
| 89 | 3300009174 | Ga0105241_10000086 | Ga0105241_1000008649 | 422 |
| 90 | 3300009174 | Ga0105241_10005221 | Ga0105241_100052213 | 422 |
| 91 | 3300009174 | Ga0105241_10190775 | Ga0105241_101907752 | 422 |
| 92 | 3300009176 | Ga0105242_10066597 | Ga0105242_100665973 | 422 |
| 93 | 3300009545 | Ga0105237_10003647 | Ga0105237_100036475 | 422 |
| 94 | 3300009545 | Ga0105237_10004072 | Ga0105237_1000407217 | 422 |
| 95 | 3300009545 | Ga0105237_10059488 | Ga0105237_100594883 | 422 |
| 96 | 3300010375 | Ga0105239_10000002 | Ga0105239_10000002145 | 422 |
| 97 | 3300010375 | Ga0105239_10000758 | Ga0105239_1000075824 | 422 |
| 98 | 3300010375 | Ga0105239_10001789 | Ga0105239_1000178930 | 422 |
| 99 | 3300010375 | Ga0105239_10023308 | Ga0105239_100233082 | 422 |
| 100 | 3300010375 | Ga0105239_10024710 | Ga0105239_100247105 | 422 |
| 101 | 3300013100 | Ga0157373_10002581 | Ga0157373_1000258111 | 422 |
| 102 | 3300013100 | Ga0157373_10045218 | Ga0157373_100452182 | 422 |
| 103 | 3300013102 | Ga0157371_10018424 | Ga0157371_100184243 | 422 |
| 104 | 3300013102 | Ga0157371_10064378 | Ga0157371_100643782 | 422 |
| 105 | 3300013104 | Ga0157370_10266337 | Ga0157370_102663371 | 422 |
| 106 | 3300013105 | Ga0157369_10000475 | Ga0157369_100004754 | 422 |
| 107 | 3300013105 | Ga0157369_10048946 | Ga0157369_100489462 | 422 |
| 108 | 3300013105 | Ga0157369_10232993 | Ga0157369_102329932 | 422 |
| 109 | 3300013296 | Ga0157374_10000128 | Ga0157374_1000012810 | 422 |
| 110 | 3300013296 | Ga0157374_10000202 | Ga0157374_1000020214 | 422 |
| 111 | 3300013297 | Ga0157378_10005717 | Ga0157378_100057174 | 422 |
| 112 | 3300013297 | Ga0157378_10005849 | Ga0157378_100058495 | 422 |
| 113 | 3300013297 | Ga0157378_10063905 | Ga0157378_100639052 | 422 |
| 114 | 3300013306 | Ga0163162_10000032 | Ga0163162_1000003227 | 422 |
| 115 | 3300013307 | Ga0157372_10000017 | Ga0157372_10000017154 | 422 |
| 116 | 3300013307 | Ga0157372_10003385 | Ga0157372_100033853 | 422 |
| 117 | 3300013308 | Ga0157375_10037080 | Ga0157375_100370802 | 422 |
| 118 | 3300013308 | Ga0157375_10175840 | Ga0157375_101758402 | 422 |
| 119 | 3300025231 | Ga0207427_100103 | Ga0207427_10010395 | 422 |
| 120 | 3300025233 | Ga0209437_100017 | Ga0209437_100017278 | 422 |
| 121 | 3300025233 | Ga0209437_100101 | Ga0209437_100101116 | 422 |
| 122 | 3300025261 | Ga0209233_1000124 | Ga0209233_1000124120 | 422 |
| 123 | 3300025272 | Ga0209455_1006769 | Ga0209455_10067693 | 422 |
| 124 | 3300025899 | Ga0207642_10012988 | Ga0207642_100129882 | 422 |
| 125 | 3300025904 | Ga0207647_10000511 | Ga0207647_1000051119 | 422 |
| 126 | 3300025907 | Ga0207645_10001210 | Ga0207645_1000121014 | 422 |
| 127 | 3300025909 | Ga0207705_10000079 | Ga0207705_1000007980 | 422 |
| 128 | 3300025909 | Ga0207705_10071629 | Ga0207705_100716292 | 422 |
| 129 | 3300025911 | Ga0207654_10007482 | Ga0207654_100074824 | 422 |
| 130 | 3300025911 | Ga0207654_10043271 | Ga0207654_100432712 | 422 |
| 131 | 3300025913 | Ga0207695_10001232 | Ga0207695_100012326 | 422 |
| 132 | 3300025913 | Ga0207695_10004447 | Ga0207695_1000444713 | 422 |
| 133 | 3300025913 | Ga0207695_10009118 | Ga0207695_1000911813 | 422 |
| 134 | 3300025914 | Ga0207671_10005889 | Ga0207671_1000588911 | 422 |
| 135 | 3300025914 | Ga0207671_10009491 | Ga0207671_100094916 | 422 |
| 136 | 3300025914 | Ga0207671_10014622 | Ga0207671_100146225 | 422 |
| 137 | 3300025931 | Ga0207644_10005149 | Ga0207644_100051498 | 422 |
| 138 | 3300025932 | Ga0207690_10000318 | Ga0207690_1000031832 | 422 |
| 139 | 3300025932 | Ga0207690_10042336 | Ga0207690_100423362 | 422 |
| 140 | 3300025933 | Ga0207706_10000120 | Ga0207706_1000012038 | 422 |
| 141 | 3300025938 | Ga0207704_10000099 | Ga0207704_1000009911 | 422 |
| 142 | 3300025949 | Ga0207667_10000037 | Ga0207667_10000037128 | 422 |
| 143 | 3300025949 | Ga0207667_10007957 | Ga0207667_100079578 | 422 |
| 144 | 3300025949 | Ga0207667_10028059 | Ga0207667_100280595 | 422 |
| 145 | 3300025960 | Ga0207651_10005116 | Ga0207651_100051166 | 422 |
| 146 | 3300026023 | Ga0207677_10082921 | Ga0207677_100829211 | 422 |
| 147 | 3300026041 | Ga0207639_10016182 | Ga0207639_100161823 | 422 |
| 148 | 3300026041 | Ga0207639_10185337 | Ga0207639_101853371 | 422 |
| 149 | 3300026067 | Ga0207678_10038074 | Ga0207678_100380744 | 422 |
| 150 | 3300026078 | Ga0207702_10000196 | Ga0207702_1000019652 | 422 |
| 151 | 3300026078 | Ga0207702_10107228 | Ga0207702_101072282 | 422 |
| 152 | 3300026121 | Ga0207683_10003712 | Ga0207683_100037126 | 422 |
| 153 | 3300028379 | Ga0268266_10000018 | Ga0268266_10000018282 | 422 |
| 154 | 3300028794 | Ga0307515_10014453 | Ga0307515_1001445311 | 422 |
| 155 | 3300033179 | Ga0307507_10000064 | Ga0307507_1000006455 | 422 |
| 156 | 3300033180 | Ga0307510_10002860 | Ga0307510_1000286013 | 422 |
| 157 | 3300037312 | Ga0395899_0000033 | Ga0395899_0000033_35020_36303 | 422 |
| 158 | 3300037312 | Ga0395899_0000493 | Ga0395899_0000493_25374_26660 | 422 |
| 159 | 3300037312 | Ga0395899_0000629 | Ga0395899_0000629_14332_15621 | 422 |
| 160 | 3300037312 | Ga0395899_0029721 | Ga0395899_0029721_1437_2726 | 422 |
| 161 | 3300037418 | Ga0395900_0000480 | Ga0395900_0000480_33306_34595 | 422 |
| 162 | 3300037418 | Ga0395900_0000506 | Ga0395900_0000506_33147_34430 | 422 |
| 163 | 3300037418 | Ga0395900_0009920 | Ga0395900_0009920_1874_3163 | 422 |
| 164 | 3300037466 | Ga0395898_0030967 | Ga0395898_0030967_414_1703 | 422 |
| 165 | 3300037466 | Ga0395898_0144891 | Ga0395898_0144891_652_1941 | 422 |
| 166 | 3300037471 | Ga0395905_0000738 | Ga0395905_0000738_8501_9790 | 422 |
| 167 | 3300037471 | Ga0395905_0001166 | Ga0395905_0001166_26173_27462 | 422 |
| 168 | 3300038443 | Ga0395901_0000853 | Ga0395901_0000853_10984_12273 | 422 |
| 169 | 3300038443 | Ga0395901_0002096 | Ga0395901_0002096_18522_19811 | 422 |
| 170 | 3300039447 | Ga0436361_0021149 | Ga0436361_0021149_2463_3746 | 422 |
| 171 | 3300044693 | Ga0466961_0047453 | Ga0466961_0047453_73_1359 | 422 |
| 172 | 3300045836 | Ga0466958_0031614 | Ga0466958_0031614_1582_2868 | 422 |
| 173 | 3300046471 | Ga0495650_0000087 | Ga0495650_0000087_11677_12969 | 422 |
| 174 | 3300046507 | Ga0495606_0000052 | Ga0495606_0000052_181464_182750 | 422 |
| 175 | 3300046512 | Ga0495610_0000903 | Ga0495610_0000903_5901_7196 | 422 |
| 176 | 3300046513 | Ga0495616_0005196 | Ga0495616_0005196_5886_7178 | 422 |
| 177 | 3300046513 | Ga0495616_0019186 | Ga0495616_0019186_1382_2677 | 422 |
| 178 | 3300046538 | Ga0495609_0010327 | Ga0495609_0010327_329_1612 | 422 |
| 179 | 3300046558 | Ga0495633_0003064 | Ga0495633_0003064_1105_2400 | 422 |
| 180 | 3300046616 | Ga0495668_0000012 | Ga0495668_0000012_279545_280831 | 422 |
| 181 | 3300046660 | Ga0495625_0000036 | Ga0495625_0000036_10766_12058 | 422 |
| 182 | 3300046660 | Ga0495625_0014574 | Ga0495625_0014574_4376_5665 | 422 |
| 183 | 3300046660 | Ga0495625_0021139 | Ga0495625_0021139_1880_3175 | 422 |
| 184 | 3300046660 | Ga0495625_0043637 | Ga0495625_0043637_130_1425 | 422 |
| 185 | 3300046660 | Ga0495625_0131252 | Ga0495625_0131252_255_1538 | 422 |
| 186 | 3300046665 | Ga0495661_0003611 | Ga0495661_0003611_6548_7837 | 422 |
| 187 | 3300046665 | Ga0495661_0035887 | Ga0495661_0035887_993_2294 | 422 |
| 188 | 3300046665 | Ga0495661_0119352 | Ga0495661_0119352_93_1385 | 422 |
| 189 | 3300046692 | Ga0495671_0050664 | Ga0495671_0050664_123_1415 | 422 |
| 190 | 3300046694 | Ga0495649_0000017 | Ga0495649_0000017_209653_210945 | 422 |
| 191 | 3300047443 | Ga0495687_024017 | Ga0495687_024017_894_2189 | 422 |
| 192 | 3300047472 | Ga0495686_0000582 | Ga0495686_0000582_21222_22508 | 422 |
| 193 | 3300049459 | Ga0495678_014851 | Ga0495678_014851_2138_3433 | 422 |
| 194 | 3300050493 | nmdc:mga0k408_3518_c1 | nmdc:mga0k408_3518_c1_2255_3541 | 422 |
| 195 | 3300050493 | nmdc:mga0k408_821_c1 | nmdc:mga0k408_821_c1_3283_4569 | 422 |
| 196 | 3300050493 | nmdc:mga0k408_824_c1 | nmdc:mga0k408_824_c1_163_1452 | 422 |
| 197 | 3300053080 | Ga0500635_0002671 | Ga0500635_0002671_1811_3094 | 422 |
| 198 | 3300053122 | Ga0500608_002945 | Ga0500608_002945_884_2167 | 422 |
| 199 | 3300053125 | Ga0500618_000002 | Ga0500618_000002_54552_55847 | 422 |
| 200 | 3300053125 | Ga0500618_026032 | Ga0500618_026032_14_1309 | 422 |
| 201 | 3300053130 | Ga0500642_0006793 | Ga0500642_0006793_1831_3114 | 422 |
| 202 | 3300053156 | Ga0500622_0004557 | Ga0500622_0004557_3133_4422 | 422 |
| 203 | 3300053157 | Ga0500624_000271 | Ga0500624_000271_15002_16288 | 422 |
| 204 | 2162886007 | SwRhRL2b_contig_2453040 | SwRhRL2b_0035.00006600 | 423 |
| 205 | 3300005289 | Ga0065704_10002795 | Ga0065704_100027953 | 423 |
| 206 | 3300005563 | Ga0068855_100022866 | Ga0068855_1000228663 | 423 |
| 207 | 3300009093 | Ga0105240_10000237 | Ga0105240_1000023724 | 423 |
| 208 | 3300009148 | Ga0105243_10000025 | Ga0105243_1000002555 | 423 |
| 209 | 3300009545 | Ga0105237_10000224 | Ga0105237_1000022451 | 423 |
| 210 | 3300009545 | Ga0105237_10057618 | Ga0105237_100576183 | 423 |
| 211 | 3300010375 | Ga0105239_10005094 | Ga0105239_1000509417 | 423 |
| 212 | 3300013307 | Ga0157372_10108752 | Ga0157372_101087522 | 423 |
| 213 | 3300025261 | Ga0209233_1021506 | Ga0209233_10215061 | 423 |
| 214 | 3300025913 | Ga0207695_10000013 | Ga0207695_1000001325 | 423 |
| 215 | 3300025913 | Ga0207695_10251021 | Ga0207695_102510212 | 423 |
| 216 | 3300025914 | Ga0207671_10000272 | Ga0207671_100002723 | 423 |
| 217 | 3300025914 | Ga0207671_10036318 | Ga0207671_100363183 | 423 |
| 218 | 3300025935 | Ga0207709_10000003 | Ga0207709_10000003871 | 423 |
| 219 | 3300028379 | Ga0268266_10253680 | Ga0268266_102536801 | 423 |
| 220 | 3300028786 | Ga0307517_10004683 | Ga0307517_1000468315 | 423 |
| 221 | 3300030731 | Ga0316177_1198244 | Ga0316177_11982443 | 423 |
| 222 | 3300030732 | Ga0316176_1050137 | Ga0316176_10501375 | 423 |
| 223 | 3300030742 | Ga0316183_1065995 | Ga0316183_10659959 | 423 |
| 224 | 3300030744 | Ga0316181_1148726 | Ga0316181_11487268 | 423 |
| 225 | 3300030745 | Ga0316182_1043318 | Ga0316182_10433181 | 423 |
| 226 | 3300031548 | Ga0307408_100000611 | Ga0307408_10000061110 | 423 |
| 227 | 3300031548 | Ga0307408_100001373 | Ga0307408_10000137316 | 423 |
| 228 | 3300031911 | Ga0307412_10001456 | Ga0307412_100014564 | 423 |
| 229 | 3300032002 | Ga0307416_100281374 | Ga0307416_1002813741 | 423 |
| 230 | 3300032004 | Ga0307414_10034651 | Ga0307414_100346512 | 423 |
| 231 | 3300032004 | Ga0307414_10217982 | Ga0307414_102179822 | 423 |
| 232 | 3300032005 | Ga0307411_10018268 | Ga0307411_100182683 | 423 |
| 233 | 3300046471 | Ga0495650_0047997 | Ga0495650_0047997_420_1772 | 423 |
| 234 | 3300046507 | Ga0495606_0031877 | Ga0495606_0031877_364_1713 | 423 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4gic-assembly1.cif.gz_B | crystal structure of a putative histidinol dehydrogenase (target psi-014034) from methylococcus capsulatus | 0.8221 | 1 | 344 |
| 4fd3-assembly3.cif.gz_C-2 | crystal structure of apo-formed ymtoar1 | 0.7728 | 231 | 276 |
| 5vlc-assembly2.cif.gz_D | crystal structure of medicago truncatula l-histidinol dehydrogenase in complex with l-histidinol | 0.7508 | 1 | 421 |
| 4gic-assembly1.cif.gz_B | crystal structure of a putative histidinol dehydrogenase (target psi-014034) from methylococcus capsulatus | 0.7471 | 1 | 344 |
| 5vld-assembly1.cif.gz_A | crystal structure of medicago truncatula l-histidinol dehydrogenase in complex with l-histidine and nad+ | 0.7466 | 1 | 421 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4gicB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.9602 | 230 | 345 | 3.40.50.1980 |
| 6an0A02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.9158 | 28 | 225 | 3.40.50.1980 |
| 1karB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.9068 | 28 | 225 | 3.40.50.1980 |
| af_Q2FUT8_21_215_3.40.50.1980 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.9051 | 31 | 219 | 3.40.50.1980 |
| 1k75B01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.8975 | 231 | 359 | 3.40.50.1980 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2M6ZRC1-F1-model_v4 | Histidinol dehydrogenase | 0.9771 | 229 | 346 |
GO:0000105
GO:0004399 GO:0005829 GO:0046872 GO:0051287 |
| AF-A0A7S2H7V4-F1-model_v4 | histidinol dehydrogenase (EC 1.1.1.23) | 0.9734 | 224 | 327 |
GO:0000105
GO:0004399 GO:0005829 GO:0046872 GO:0051287 |
| AF-A0A3D2RQQ8-F1-model_v4 | Histidinol dehydrogenase | 0.9614 | 231 | 304 |
GO:0000105
GO:0004399 GO:0005737 GO:0046872 GO:0051287 |
| AF-A0A377BNP2-F1-model_v4 | histidinol dehydrogenase (EC 1.1.1.23) | 0.9584 | 226 | 352 |
GO:0000105
GO:0004399 GO:0005829 GO:0046872 GO:0051287 |
| AF-A0A357D169-F1-model_v4 | Histidinol dehydrogenase | 0.9552 | 229 | 328 |
GO:0000105
GO:0004399 GO:0005829 GO:0046872 GO:0051287 |
Predicted Structure (AlphaFold2)
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